SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for FucI/AraA N-terminal and middle domains superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a FucI/AraA N-terminal and middle domains domain in that genome.

Complete genomes
Genome     Number   Proteins
Adineta_vaga 6 6
Chlorella_variabilis_sp._NC64A_ 1 1
Naegleria_gruberi_ 2 1
Trichomonas_vaginalis_ 1 1
Thermobaculum_terrenum_ATCC_BAA-798 1 1
Conexibacter_woesei_DSM_14684 2 2
Coriobacterium_glomerans_PW2 4 4
Rubrobacter_xylanophilus_DSM_9941 2 2
Acidothermus_cellulolyticus_11B 1 1
Modestobacter_marinus 1 1
Geodermatophilus_obscurus_DSM_43160 1 1
Catenulispora_acidiphila_DSM_44928 1 1
Stackebrandtia_nassauensis_DSM_44728 3 3
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1 1
Streptosporangium_roseum_DSM_43021 2 2
Kitasatospora_setae_KM-6054 1 1
Streptomyces_bingchenggensis_BCW-1 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Actinosynnema_mirum_DSM_43827 1 1
Saccharopolyspora_erythraea_NRRL_2338 1 1
Amycolatopsis_mediterranei_U32 2 2
Kribbella_flavida_DSM_17836 1 1
Nocardioides_sp._JS614 1 1
Propionibacterium_propionicum_F0230a 1 1
Propionibacterium_acnes_SK137 2 2
Microlunatus_phosphovorus_NM-1 1 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1 1
Verrucosispora_maris_AB-18-032 1 1
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 1 1
Actinoplanes_sp._SE50/110 2 2
Actinoplanes_missouriensis_431 2 2
Rhodococcus_jostii_RHA1 1 1
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Sanguibacter_keddieii_DSM_10542 1 1
Beutenbergia_cavernae_DSM_12333 2 2
Microbacterium_testaceum_StLB037 1 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1 1
Jonesia_denitrificans_DSM_20603 1 1
Brachybacterium_faecium_DSM_4810 1 1
Isoptericola_variabilis_225 1 1
Xylanimonas_cellulosilytica_DSM_15894 1 1
Cellulomonas_flavigena_DSM_20109 1 1
Cellulomonas_fimi_ATCC_484 1 1
[Cellvibrio]_gilvus_ATCC_13127 1 1
Arthrobacter_phenanthrenivorans_Sphe3 1 1
Arthrobacter_chlorophenolicus_A6 1 1
Arthrobacter_aurescens_TC1 1 1
Arthrobacter_arilaitensis_Re117 1 1
Arthrobacter_sp._Rue61a 1 1
Arthrobacter_sp._FB24 1 1
Bifidobacterium_longum_subsp._longum_JDM301 1 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1 1
Bifidobacterium_dentium_Bd1 1 1
Bifidobacterium_adolescentis_ATCC_15703 1 1
Actinomyces_sp._F0330 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 4 4
Anaerolinea_thermophila_UNI-1 2 2
Herpetosiphon_aurantiacus_DSM_785 1 1
Truepera_radiovictrix_DSM_17093 2 2
Deinococcus_deserti_VCD115 1 1
Deinococcus_maricopensis_DSM_21211 1 1
Meiothermus_silvanus_DSM_9946 1 1
Meiothermus_ruber_DSM_1279 1 1
Megamonas_hypermegale 5 5
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2 2
Clostridium_clariflavum_DSM_19732 1 1
Eubacterium_siraeum 3 3
Clostridium_cellulolyticum_H10 2 2
Ruminococcus_sp. 3 3
Ruminococcus_albus_7 1 1
Sulfobacillus_acidophilus_DSM_10332 1 1
Oscillibacter_valericigenes_Sjm18-20 2 2
Desulfosporosinus_acidiphilus_SJ4 1 1
Desulfitobacterium_hafniense_Y51 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Eubacterium_eligens_ATCC_27750 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_saccharolyticum_WM1 2 2
Clostridium_phytofermentans_ISDg 3 3
Clostridium_lentocellum_DSM_5427 2 2
[Ruminococcus]_obeum 6 6
[Ruminococcus]_torques 3 3
Eubacterium_rectale_M104/1 1 1
Eubacterium_rectale_ATCC_33656 2 2
Roseburia_hominis_A2-183 2 2
Roseburia_intestinalis 2 2
Butyrivibrio_proteoclasticus_B316 1 1
Butyrivibrio_fibrisolvens 3 3
Clostridium_sp._BNL1100 2 2
Clostridium_ljungdahlii_DSM_13528 1 1
Clostridium_beijerinckii_NCIMB_8052 3 3
Clostridium_perfringens_ATCC_13124 1 1
Clostridium_cellulovorans_743B 3 3
Clostridium_acetobutylicum_ATCC_824 3 3
Mahella_australiensis_50-1_BON 4 4
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kronotskyensis_2002 2 2
Caldicellulosiruptor_hydrothermalis_108 3 3
Caldicellulosiruptor_owensensis_OL 2 2
Caldicellulosiruptor_saccharolyticus_DSM_8903 2 2
Caldicellulosiruptor_bescii_DSM_6725 2 2
Thermoanaerobacterium_xylanolyticum_LX-11 2 2
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2 2
Coprothermobacter_proteolyticus_DSM_5265 1 1
Tepidanaerobacter_acetatoxydans_Re1 1 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 2 2
Thermoanaerobacter_italicus_Ab9 1 1
Halothermothrix_orenii_H_168 1 1
Halanaerobium_hydrogeniformans 1 1
Halanaerobium_praevalens_DSM_2228 1 1
Carnobacterium_sp._17-4 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Melissococcus_plutonius_DAT561 1 1
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecium_Aus0004 1 1
Weissella_koreensis_KACC_15510 1 1
Leuconostoc_sp._C2 1 1
Leuconostoc_kimchii_IMSNU_11154 1 1
Leuconostoc_citreum_KM20 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1 1
Leuconostoc_gasicomitatum_LMG_18811 1 1
Lactobacillus_crispatus_ST1 1 1
Lactobacillus_fermentum_IFO_3956 1 1
Lactobacillus_sakei_subsp._sakei_23K 1 1
Lactobacillus_reuteri_DSM_20016 1 1
Lactobacillus_plantarum_JDM1 1 1
Lactobacillus_buchneri_NRRL_B-30929 2 2
Lactobacillus_buchneri 3 3
Lactobacillus_brevis_ATCC_367 1 1
Pediococcus_pentosaceus_ATCC_25745 1 1
Streptococcus_pneumoniae_P1031 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Paenibacillus_sp._JDR-2 2 2
Paenibacillus_terrae_HPL-003 2 2
Paenibacillus_mucilaginosus_3016 3 3
Paenibacillus_polymyxa_M1 2 2
Bacillus_selenitireducens_MLS10 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 2 2
Oceanobacillus_iheyensis_HTE831 1 1
Anoxybacillus_flavithermus_WK1 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_sp._JS 1 1
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_halodurans_C-125 1 1
Bacillus_clausii_KSM-K16 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_pumilus_SAFR-032 1 1
Bacillus_megaterium_DSM_319 1 1
Bacillus_coagulans_2-6 1 1
Melioribacter_roseus_P3M 2 2
Haliscomenobacter_hydrossis_DSM_1100 1 1
Niastella_koreensis_GR20-10 3 3
Chitinophaga_pinensis_DSM_2588 1 1
Rhodothermus_marinus_DSM_4252 1 1
Belliella_baltica_DSM_15883 1 1
Cyclobacterium_marinum_DSM_745 3 3
Fibrella_aestuarina 1 1
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 3 3
Spirosoma_linguale_DSM_74 3 3
Runella_slithyformis_DSM_19594 2 2
Tannerella_forsythia_ATCC_43037 1 1
Paludibacter_propionicigenes_WB4 1 1
Odoribacter_splanchnicus_DSM_20712 1 1
Bacteroides_sp._CF50 2 2
Prevotella_ruminicola_23 4 4
Bacteroides_salanitronis_DSM_18170 2 2
Bacteroides_helcogenes_P_36-108 2 2
Bacteroides_vulgatus_ATCC_8482 4 4
Bacteroides_thetaiotaomicron_VPI-5482 4 4
Bacteroides_fragilis_YCH46 2 2
Pedobacter_saltans_DSM_12145 2 2
Pedobacter_heparinus_DSM_2366 4 4
Sphingobacterium_sp._21 3 3
Zunongwangia_profunda_SM-A87 1 1
Gramella_forsetii_KT0803 1 1
Robiginitalea_biformata_HTCC2501 1 1
Zobellia_galactanivorans 1 1
Muricauda_ruestringensis_DSM_13258 1 1
Flavobacterium_johnsoniae_UW101 1 1
Phycisphaera_mikurensis_NBRC_102666 3 3
Rhodopirellula_baltica_SH_1 1 1
Pirellula_staleyi_DSM_6068 1 1
Coraliomargarita_akajimensis_DSM_45221 1 1
Opitutus_terrae_PB90-1 2 2
Akkermansia_muciniphila_ATCC_BAA-835 1 1
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_pilosicoli_95/1000 2 2
Spirochaeta_smaragdinae_DSM_11293 3 3
Sphaerochaeta_pleomorpha_str._Grapes 6 6
Sphaerochaeta_globus_str._Buddy 4 4
Sphaerochaeta_coccoides_DSM_17374 2 2
Spirochaeta_caldaria_DSM_7334 3 3
Treponema_azotonutricium_ZAS-9 3 3
Treponema_brennaborense_DSM_12168 1 1
Treponema_succinifaciens_DSM_2489 1 1
Spirochaeta_africana_DSM_8902 1 1
Spirochaeta_thermophila_DSM_6192 1 1
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 2 2
Fervidobacterium_pennivorans_DSM_9078 1 1
Thermotoga_lettingae_TMO 3 3
Thermotoga_thermarum_DSM_5069 2 2
Thermotoga_sp._RQ2 2 2
Thermotoga_naphthophila_RKU-10 2 2
Thermotoga_petrophila_RKU-1 2 2
Thermotoga_neapolitana_DSM_4359 4 4
Thermotoga_maritima_MSB8 3 3
Dictyoglomus_turgidum_DSM_6724 4 4
Dictyoglomus_thermophilum_H-6-12 3 3
Candidatus_Solibacter_usitatus_Ellin6076 2 2
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 3 3
Candidatus_Koribacter_versatilis_Ellin345 1 1
Terriglobus_saanensis_SP1PR4 2 2
Terriglobus_roseus_DSM_18391 3 3
Acidobacterium_capsulatum_ATCC_51196 1 1
Desulfomonile_tiedjei_DSM_6799 1 1
Sorangium_cellulosum_'So_ce_56' 2 2
Stigmatella_aurantiaca_DW4/3-1 1 1
Leptothrix_cholodnii_SP-6 1 1
Pseudovibrio_sp._FO-BEG1 1 1
Jannaschia_sp._CCS1 1 1
Rhodobacter_capsulatus_SB_1003 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
alpha_proteobacterium_HIMB59 1 1
Rhizobium_leguminosarum_bv._viciae_3841 1 1
Saccharophagus_degradans_2-40 1 1
Cellvibrio_japonicus_Ueda107 1 1
Haemophilus_somnus_129PT 1 1
Gallibacterium_anatis_UMN179 1 1
Haemophilus_parasuis_SH0165 1 1
Haemophilus_influenzae_PittEE 1 1
Actinobacillus_succinogenes_130Z 2 2
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1
Tolumonas_auensis_DSM_9187 2 2
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_anguillarum_775 1 1
Vibrio_furnissii_NCTC_11218 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Shewanella_sp._MR-4 1 1
Shewanella_putrefaciens_CN-32 1 1
Photorhabdus_asymbiotica 1 1
Proteus_mirabilis_HI4320 1 1
Edwardsiella_tarda_EIB202 1 1
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1
Yersinia_pseudotuberculosis_IP_31758 2 2
Yersinia_pestis_Pestoides_F 2 2
Yersinia_enterocolitica_subsp._enterocolitica_8081 2 2
Serratia_sp._AS12 1 1
Serratia_sp._ATCC_39006 2 2
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 1 1
Dickeya_dadantii_Ech703 2 2
Dickeya_zeae_Ech1591 1 1
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1
Sodalis_glossinidius_str._'morsitans' 1 1
Pantoea_sp._At-9b 1 1
Pantoea_vagans_C9-1 2 2
Pantoea_ananatis_LMG_20103 2 2
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 1 1
Erwinia_billingiae_Eb661 1 1
Erwinia_pyrifoliae_Ep1/96 1 1
Erwinia_amylovora_ATCC_49946 1 1
Escherichia_blattae_DSM_4481 1 1
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Enterobacteriaceae_bacterium_strain_FGI_57 1 1
Shigella_sonnei_Ss046 1 1
Shigella_flexneri_5_str._8401 2 2
Shigella_dysenteriae_Sd197 2 2
Shigella_boydii_CDC_3083-94 1 1
Salmonella_bongori_NCTC_12419 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1 1
Klebsiella_oxytoca_E718 3 3
Klebsiella_variicola_At-22 2 2
Klebsiella_pneumoniae_NTUH-K2044 2 2
Enterobacter_aerogenes_KCTC_2190 1 1
Escherichia_fergusonii_ATCC_35469 1 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 2 2
Enterobacter_sp._R4-368 1 1
Enterobacter_sp._638 1 1
Enterobacter_asburiae_LF7a 2 2
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Citrobacter_rodentium_ICC168 2 2
Citrobacter_koseri_ATCC_BAA-895 2 2
Pyrolobus_fumarii_1A 2 2
Hyperthermus_butylicus_DSM_5456 1 1
Thermogladius_cellulolyticus_1633 1 1
Ignisphaera_aggregans_DSM_17230 2 2
Aeropyrum_pernix_K1 1 1
Ignicoccus_hospitalis_KIN4/I 1 1
Thermosphaera_aggregans_DSM_11486 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_kamchatkensis_1221n 1 1
Thermofilum_sp._1910b 1 1
Thermofilum_pendens_Hrk_5 2 2
Vulcanisaeta_moutnovskia_768-28 2 2
Vulcanisaeta_distributa_DSM_14429 2 2
Caldivirga_maquilingensis_IC-167 4 4
Pyrobaculum_sp._1860 2 2
Pyrobaculum_calidifontis_JCM_11548 2 2
Pyrobaculum_arsenaticum_DSM_13514 2 2
Pyrobaculum_oguniense_TE7 2 2
Thermoproteus_neutrophilus_V24Sta 1 1
Pyrobaculum_aerophilum_str._IM2 2 2
Pyrobaculum_islandicum_DSM_4184 1 1
Thermoproteus_uzoniensis_768-20 1 1
Thermoproteus_tenax_Kra_1 2 2
Archaeoglobus_profundus_DSM_5631 1 1
Thermococcus_sp._4557 2 2
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 2 2
Thermococcus_sibiricus_MM_739 2 2
Thermococcus_barophilus_MP 2 2
Pyrococcus_sp._ST04 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 2 2
Halorhabdus_utahensis_DSM_12940 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Gordonibacter_pamelaeae_7-10-1-b 1 1
Frankia_sp._EuI1c 2 2
Streptomyces_albus_J1074 1 1
Streptomyces_venezuelae_ATCC_10712 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Amycolatopsis_mediterranei_RB 2 2
Amycolatopsis_mediterranei_S699 2 2
Amycolatopsis_mediterranei_S699 2 2
Amycolatopsis_orientalis_HCCB10007 1 1
Propionibacterium_avidum_44067 1 1
Propionibacterium_acnes_TypeIA2_P.acn31 2 2
Propionibacterium_acnes_TypeIA2_P.acn17 2 2
Propionibacterium_acnes_TypeIA2_P.acn33 2 2
Propionibacterium_acnes_C1 2 2
Propionibacterium_acnes_HL096PA1 2 2
Propionibacterium_acnes_6609 2 2
Propionibacterium_acnes_266 2 2
Propionibacterium_acnes_KPA171202 2 2
Propionibacterium_acidipropionici_ATCC_4875 1 1
Actinoplanes_friuliensis_DSM_7358 2 2
Mycobacterium_smegmatis_str._MC2_155 1 1
Clavibacter_michiganensis_subsp._sepedonicus 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1 1
Gardnerella_vaginalis_HMP9231 1 1
Gardnerella_vaginalis_ATCC_14019 1 1
Bifidobacterium_longum_NCC2705 1 1
Bifidobacterium_longum_DJO10A 1 1
Bifidobacterium_longum_subsp._infantis_157F 1 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1 1
Bifidobacterium_longum_subsp._longum_BBMN68 1 1
Bifidobacterium_longum_subsp._longum_F8 1 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1 1
Bifidobacterium_animalis_subsp._lactis_B420 1 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1 1
Bifidobacterium_animalis_subsp._lactis_V9 1 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1 1
Bifidobacterium_animalis_subsp._lactis_AD011 1 1
Bifidobacterium_asteroides_PRL2011 1 1
Actinomyces_odontolyticus_ATCC_17982 1 1
Actinomyces_viscosus_C505 1 1
Chthonomonas_calidirosea_T49 1 1
Deinococcus_peraridilitoris_DSM_19664 3 3
Eubacterium_siraeum_V10Sc8a 3 3
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 2 2
Sulfobacillus_acidophilus_TPY 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 2 2
Coprococcus_catus_GD/7 2 2
Roseburia_intestinalis_XB6B4 2 2
Clostridium_sp._SY8519 1 1
Clostridium_saccharobutylicum_DSM_13864 2 2
Clostridium_autoethanogenum_DSM_10061 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 3 3
Clostridium_perfringens_str._13 1 1
Clostridium_pasteurianum_BC1 1 1
Clostridium_acetobutylicum_DSM_1731 3 3
Clostridium_acetobutylicum_EA_2018 3 3
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 2 2
Thermoanaerobacterium_thermosaccharolyticum_M0795 2 2
Halobacteroides_halobius_DSM_5150 1 1
Melissococcus_plutonius_ATCC_35311 1 1
Enterococcus_mundtii_QU_25 1 1
Enterococcus_casseliflavus_EC20 1 1
Enterococcus_faecium_Aus0085 1 1
Enterococcus_faecium_NRRL_B-2354 1 1
Enterococcus_faecium_DO 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 1 1
Leuconostoc_gelidum_JB7 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_johnsonii_NCC_533 1 1
Lactobacillus_fermentum_F-6 1 1
Lactobacillus_fermentum_CECT_5716 1 1
Lactobacillus_reuteri_I5007 1 1
Lactobacillus_reuteri_JCM_1112 1 1
Lactobacillus_reuteri_SD2112 1 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Lactobacillus_plantarum_WCFS1 1 1
Lactobacillus_brevis_KB290 1 1
Lactobacillus_acidophilus_La-14 1 1
Lactobacillus_acidophilus_NCFM 1 1
Pediococcus_pentosaceus_SL4 1 1
Lactococcus_lactis_subsp._lactis_KF147 1 1
Streptococcus_pneumoniae_A026 1 1
Streptococcus_pneumoniae_ST556 1 1
Streptococcus_pneumoniae_SPNA45 1 1
Streptococcus_pneumoniae_SPN994039 1 1
Streptococcus_pneumoniae_SPN994038 1 1
Streptococcus_pneumoniae_SPN034183 1 1
Streptococcus_pneumoniae_SPN034156 1 1
Streptococcus_pneumoniae_INV104 1 1
Streptococcus_pneumoniae_INV200 1 1
Streptococcus_pneumoniae_OXC141 1 1
Streptococcus_pneumoniae_gamPNI0373 1 1
Streptococcus_pneumoniae_AP200 1 1
Streptococcus_pneumoniae_ATCC_700669 1 1
Streptococcus_pneumoniae_TCH8431/19A 1 1
Streptococcus_pneumoniae_CGSP14 1 1
Streptococcus_pneumoniae_G54 1 1
Streptococcus_pneumoniae_JJA 1 1
Streptococcus_pneumoniae_70585 1 1
Streptococcus_pneumoniae_Hungary19A-6 1 1
Streptococcus_pneumoniae_Taiwan19F-14 1 1
Streptococcus_pneumoniae_D39 1 1
Streptococcus_pneumoniae_670-6B 1 1
Streptococcus_pneumoniae_R6 1 1
Streptococcus_pneumoniae_TIGR4 1 1
Streptococcus_suis_T15 1 1
Streptococcus_suis_D9 1 1
Streptococcus_suis_A7 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 2 2
Thermobacillus_composti_KWC4 2 2
Paenibacillus_sp._Y412MC10 4 4
Paenibacillus_mucilaginosus_KNP414 3 3
Paenibacillus_mucilaginosus_K02 3 3
Paenibacillus_polymyxa_CR1 2 2
Paenibacillus_polymyxa_SC2 2 2
Paenibacillus_polymyxa_E681 1 1
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_N53-1 1 1
Listeria_monocytogenes_La111 1 1
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_SLCC7179 1 1
Listeria_monocytogenes_SLCC2540 1 1
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_08-5578 1 1
Listeria_monocytogenes_08-5923 1 1
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_J0161 1 1
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Listeria_monocytogenes_EGD-e 1 1
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Amphibacillus_xylanus_NBRC_15112 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_licheniformis_9945A 2 2
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_cereus_AH187 1 1
Bacillus_cereus_Q1 1 1
Bacillus_cereus_NC7401 1 1
Bacillus_megaterium_WSH-002 2 2
Bacillus_megaterium_QM_B1551 2 2
Bacillus_coagulans_36D1 2 2
Rhodothermus_marinus_SG0.5JP17-172 1 1
Echinicola_vietnamensis_DSM_17526 5 5
Emticicia_oligotrophica_DSM_17448 2 2
Prevotella_dentalis_DSM_3688 1 1
Bacteroides_xylanisolvens_XB1A 3 3
Bacteroides_fragilis_638R 2 2
Bacteroides_fragilis_NCTC_9343 2 2
Singulisphaera_acidiphila_DSM_18658 1 1
Brachyspira_pilosicoli_WesB 2 2
Brachyspira_pilosicoli_B2904 2 2
Brachyspira_pilosicoli_P43/6/78 1 1
Spirochaeta_thermophila_DSM_6578 3 3
Thermotoga_maritima_MSB8 3 3
Sorangium_cellulosum_So0157-2 2 2
Zymomonas_mobilis_subsp._mobilis_CP4 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Sinorhizobium_meliloti_2011 1 1
Sinorhizobium_meliloti_GR4 1 1
Sinorhizobium_meliloti_BL225C 1 1
Sinorhizobium_meliloti_1021 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1 1
Bradyrhizobium_oligotrophicum_S58 1 1
Mannheimia_succiniciproducens_MBEL55E 1 1
Haemophilus_somnus_2336 1 1
Mannheimia_haemolytica_USMARC_2286 2 2
Mannheimia_haemolytica_M42548 2 2
Mannheimia_haemolytica_D174 2 2
Mannheimia_haemolytica_D171 2 2
Mannheimia_haemolytica_D153 2 2
Mannheimia_haemolytica_USDA-ARS-USMARC-183 2 2
Mannheimia_haemolytica_USDA-ARS-USMARC-185 2 2
Haemophilus_parasuis_ZJ0906 1 1
Haemophilus_influenzae_KR494 1 1
Haemophilus_influenzae_F3047 1 1
Haemophilus_influenzae_F3031 1 1
Haemophilus_influenzae_10810 1 1
Haemophilus_influenzae_PittGG 1 1
Haemophilus_influenzae_86-028NP 1 1
Haemophilus_influenzae_R2866 1 1
Haemophilus_influenzae_R2846 1 1
Haemophilus_influenzae_Rd_KW20 1 1
Actinobacillus_suis_H91-0380 1 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1 1
Aeromonas_hydrophila_ML09-119 2 2
Vibrio_sp._EJY3 3 3
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1 1
Vibrio_vulnificus_YJ016 1 1
Shewanella_sp._W3-18-1 1 1
Shewanella_sp._ANA-3 1 1
Shewanella_baltica_OS223 1 1
Shewanella_sp._MR-7 1 1
Shewanella_putrefaciens_200 1 1
Proteus_mirabilis_BB2000 1 1
Edwardsiella_tarda_C07-087 1 1
Edwardsiella_tarda_FL6-60 1 1
Rahnella_aquatilis_HX2 1 1
Yersinia_pseudotuberculosis_PB1/+ 2 2
Yersinia_pseudotuberculosis_YPIII 2 2
Yersinia_pseudotuberculosis_IP_32953 2 2
Yersinia_pestis_biovar_Microtus_str._91001 2 2
Yersinia_pestis_A1122 2 2
Yersinia_pestis_Z176003 2 2
Yersinia_pestis_D182038 2 2
Yersinia_pestis_D106004 2 2
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 2 2
Yersinia_pestis_Nepal516 2 2
Yersinia_pestis_Antiqua 2 2
Yersinia_pestis_Angola 2 2
Yersinia_pestis_CO92 2 2
Yersinia_pestis_KIM10+ 2 2
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1 1
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 1 1
Serratia_liquefaciens_ATCC_27592 1 1
Dickeya_dadantii_Ech586 2 2
Dickeya_dadantii_3937 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Pantoea_ananatis_LMG_5342 2 2
Pantoea_ananatis_PA13 2 2
Pantoea_ananatis_AJ13355 2 2
Erwinia_pyrifoliae_DSM_12163 1 1
Erwinia_amylovora_CFBP1430 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Raoultella_ornithinolytica_B6 4 4
Shigella_sonnei_53G 2 2
Shigella_flexneri_2002017 2 2
Shigella_flexneri_2a_str._2457T 2 2
Shigella_flexneri_2a_str._301 1 1
Shigella_dysenteriae_1617 2 2
Shigella_boydii_Sb227 2 2
Salmonella_bongori_N268-08 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 2 2
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 2 2
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 2 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 2 2
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 2 2
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 2 2
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 2 2
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 2 2
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 2 2
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 2 2
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 2 2
Salmonella_enterica_serovar_Bovismorbificans_genomics 2 2
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 2 2
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 2 2
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 2 2
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 2 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 2 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 2 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 2 2
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 2 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 2 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 2 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 2 2
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 2 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 2 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 2 2
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 2 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 2 2
Klebsiella_oxytoca_KCTC_1686 3 3
Klebsiella_pneumoniae_JM45 1 1
Klebsiella_pneumoniae_CG43 2 2
Klebsiella_pneumoniae_KCTC_2242 2 2
Klebsiella_pneumoniae_342 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_1084 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 3 3
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 2 2
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_E24377A 2 2
Escherichia_coli_E._coli_PMV-1 2 2
Escherichia_coli_JJ1886 2 2
Escherichia_coli_LY180 2 2
Escherichia_coli_APEC_O78 2 2
Escherichia_coli_O7:K1_str._CE10 2 2
Escherichia_coli_O104:H4_str._2009EL-2050 2 2
Escherichia_coli_O104:H4_str._2009EL-2071 2 2
Escherichia_coli_O104:H4_str._2011C-3493 2 2
Escherichia_coli_NA114 2 2
Escherichia_coli_P12b 2 2
Escherichia_coli_str._'clone_D_i2' 2 2
Escherichia_coli_str._'clone_D_i14' 2 2
Escherichia_coli_UM146 2 2
Escherichia_coli_042 2 2
Escherichia_coli_Xuzhou21 2 2
Escherichia_coli_IHE3034 2 2
Escherichia_coli_UMNK88 2 2
Escherichia_coli_O83:H1_str._NRG_857C 2 2
Escherichia_coli_ABU_83972 2 2
Escherichia_coli_KO11FL 2 2
Escherichia_coli_KO11FL 2 2
Escherichia_coli_LF82 2 2
Escherichia_coli_ED1a 2 2
Escherichia_coli_IAI39 2 2
Escherichia_coli_UMN026 2 2
Escherichia_coli_55989 2 2
Escherichia_coli_S88 2 2
Escherichia_coli_IAI1 2 2
Escherichia_coli_W 2 2
Escherichia_coli_W 2 2
Escherichia_coli_DH1 2 2
Escherichia_coli_DH1 2 2
Escherichia_coli_ATCC_8739 2 2
Escherichia_coli_BL21(DE3) 2 2
Escherichia_coli_BL21(DE3) 2 2
Escherichia_coli_SMS-3-5 2 2
Escherichia_coli_SE15 2 2
Escherichia_coli_SE11 2 2
Escherichia_coli_APEC_O1 2 2
Escherichia_coli_O103:H2_str._12009 2 2
Escherichia_coli_UTI89 2 2
Escherichia_coli_536 2 2
Escherichia_coli_HS 2 2
Escherichia_coli_ETEC_H10407 2 2
Escherichia_coli_O55:H7_str._RM12579 2 2
Escherichia_coli_O55:H7_str._CB9615 2 2
Escherichia_coli_O26:H11_str._11368 2 2
Escherichia_coli_CFT073 2 2
Escherichia_coli_O111:H-_str._11128 2 2
Escherichia_coli_O127:H6_str._E2348/69 2 2
Escherichia_coli_O157:H7_str._TW14359 2 2
Escherichia_coli_O157:H7_str._EC4115 2 2
Escherichia_coli_O157:H7_str._Sakai 2 2
Escherichia_coli_O157:H7_str._EDL933 2 2
Escherichia_coli_str._K-12_substr._MDS42 2 2
Escherichia_coli_BW2952 2 2
Escherichia_coli_str._K-12_substr._MG1655 2 2
Escherichia_coli_str._K-12_substr._W3110 2 2
Escherichia_coli_str._K-12_substr._DH10B 1 1
Escherichia_coli_B_str._REL606 2 2
Enterobacter_cloacae_SCF1 2 2
Enterobacter_cloacae_EcWSU1 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 2 2
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Aeropyrum_camini_SY1_=_JCM_12091 1 1
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 2 2
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 2 2
Halorhabdus_tiamatea_SARL4B 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 13 13
Uniprot_2018_03_genome 10370 10362
NCBI_2017_08_genome 62669 62658
PDB_chains_(SCOP_1.75)_(PDB) 2 2
Protein_Data_Bank_(all_PDB_sequenc) 54 54
NCBI_viral_sequences_(Viral) 2 2
Protozoadb_2010_08_(Protozoadb) 2 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 188 188
TargetDB__(Targets) 30 30
STRING_v9.0.5_(STRING) 379 379

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]