SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for CO dehydrogenase molybdoprotein N-domain-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a CO dehydrogenase molybdoprotein N-domain-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   2 2
Pan_troglodytes_76_2.1.4   (Chimpanzee)   2 2
Gorilla_gorilla_76_3.1   (Western gorilla)   2 2
Pongo_abelii_76_2   (Sumatran orangutan)   2 2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1 1
Papio_anubis_76   (Olive baboon)   4 4
Macaca_mulatta_76_1   (Rhesus monkey)   5 5
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   4 4
Otolemur_garnettii_76_3   (Small-eared galago)   5 5
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   4 4
Mus_musculus_76_38   (House mouse)   5 5
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   4 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   3 3
Cavia_porcellus_76_3   (Domestic guinea pig)   5 5
Oryctolagus_cuniculus_76_2   (Rabbit)   4 4
Ochotona_princeps_76   (American pika)   2 2
Tupaia_belangeri_76   (Northern tree shrew)   2 2
Sus_scrofa_76_10.2   (Pig)   3 3
Bos_taurus_76_3.1   (Cattle)   6 6
Ovis_aries_76_3.1   (Sheep)   4 4
Vicugna_pacos_76_1   (Alpaca)   2 2
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   3 3
Ailuropoda_melanoleuca_76_1   (Giant panda)   4 4
Canis_familiaris_76_3.1   (Dog)   5 5
Felis_catus_76_6.2   (Domestic cat)   2 2
Equus_caballus_76_2   (Horse)   12 12
Myotis_lucifugus_76_2.0   (Little brown bat)   4 4
Pteropus_vampyrus_76_1   (Large flying fox)   2 2
Sorex_araneus_76_1   (European shrew)   2 2
Erinaceus_europaeus_76   (Western European hedgehog)   2 2
Procavia_capensis_76_1   (Cape rock hyrax)   2 2
Loxodonta_africana_76_3   (African savanna elephant)   7 7
Echinops_telfairi_76   (Small Madagascar hedgehog)   2 2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   4 4
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   2 2
Macropus_eugenii_76_1.0   (Tammar wallaby)   2 2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   7 7
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   3 3
Ornithorhynchus_anatinus_76_5   (Platypus)   10 10
Saccoglossus_kowalevskii_v3.0 15 15
Petromyzon_marinus_76_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_76_2   (Turkey)   4 4
Gallus_gallus_76_4   (Chicken)   3 3
Anas_platyrhynchos_76_1.0   (Mallard)   2 2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2 2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2 2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_76_2.0   (Green anole)   3 3
Xenopus_laevis_   (African clawed frog)   2 2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2 2
Latimeria_chalumnae_76_1   (Coelacanth)   2 2
Lepisosteus_oculatus_76   (Spotted gar)   4 4
Gadus_morhua_76_1   (Atlantic cod)   2 2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   3 3
Takifugu_rubripes_76_4   (Torafugu)   4 4
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3 3
Oryzias_latipes_76_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2 2
Poecilia_formosa_76   (Amazon molly)   2 2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3 3
Astyanax_mexicanus_76   (Mexican tetra)   3 3
Danio_rerio_76_9   (Zebrafish)   4 4
Oikopleura_dioica 3 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   24 24
Ciona_intestinalis_76   (Vase tunicate)   4 4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   4 4
Adineta_vaga 11 11
Crassostrea_gigas_22   (Pacific oyster)   5 5
Lottia_gigantea_   (Owl limpet)   7 7
Helobdella_robusta_ 2 2
Capitella_sp._I_ 6 6
Danaus_plexippus_OGS1.0   (Monarch butterfly)   13 13
Heliconius_melpomene_   (Postman butterfly)   12 9
Bombyx_mori_   (Domestic silkworm)   9 9
Nasonia_vitripennis_   (Jewel wasp)   6 6
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   8 8
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   4 4
Linepithema_humile_v1.1   (Argentine ant)   2 2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4 4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3 3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3 3
Atta_cephalotes_v1.1 4 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2 2
Lucilia_cuprina   (Australian sheep blowfly)   3 2
Drosophila_grimshawi_1.3 9 9
Drosophila_willistoni_1.3 4 4
Drosophila_pseudoobscura_2.13 7 7
Drosophila_persimilis_1.3 7 7
Drosophila_suzukii 9 3
Drosophila_yakuba_1.3 5 5
Drosophila_simulans_1.3 5 5
Drosophila_sechellia_1.3 5 5
Drosophila_melanogaster_76_5   (Fruit fly)   6 6
Drosophila_erecta_1.3 5 5
Drosophila_ananassae_1.3 7 7
Drosophila_virilis_1.2 5 5
Drosophila_mojavensis_1.3 4 4
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   13 13
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   11 11
Anopheles_darlingi_22   (American malaria mosquito)   6 5
Anopheles_gambiae_49_3j   (African malaria mosquito)   9 9
Tribolium_castaneum_3.0   (Red flour beetle)   4 4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   1 1
Rhodnius_prolixus_22 7 6
Daphnia_pulex_   (Common water flea)   3 3
Strigamia_maritima_22 3 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1 1
Pristionchus_pacificus_ 5 5
Caenorhabditis_japonica_ 3 3
Caenorhabditis_brenneri_ 5 5
Caenorhabditis_remanei_ 6 6
Caenorhabditis_elegans_76_235   (Roundworm)   3 3
Caenorhabditis_briggsae_2 3 3
Acropora_digitifera_v1.0 3 3
Nematostella_vectensis_1.0   (Starlet sea anemone)   5 5
Amphimedon_queenslandica 12 12
Trichoplax_adhaerens_ 4 4
Proterospongia_sp._ATCC_50818_ 1 1
Monosiga_brevicollis_ 1 1
Sphaeroforma_arctica_JP610_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 2 2
Conidiobolus_coronatus_NRRL28638_v1.0 1 1
Mortierella_verticillata_NRRL_6337_ 1 1
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Heterobasidion_annosum_ 1 1
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 1 1
Magnaporthe_poae_ATCC_64411_22 1 1
Magnaporthe_grisea_70-15_ 1 1
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 1 1
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_albo-atrum_VaMs.102_ 1 1
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 1 1
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 2 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 2 2
Leptosphaeria_maculans_22 2 2
Setosphaeria_turcica_v1.0 2 2
Cochliobolus_miyabeanus_ATCC_44560_v1.0 2 2
Cochliobolus_victoriae_FI3_v1.0 2 2
Cochliobolus_carbonum_26-R-13_v1.0 2 2
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2 2
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 2 2
Pyrenophora_teres_f._teres_22 2 2
Pyrenophora_tritici-repentis_ 2 2
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 1 1
Dothistroma_septosporum 1 1
Septoria_musiva_v1.0 1 1
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 1 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 2 2
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 2 2
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 2 2
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   3 3
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_pastoris_GS115_ 1 1
Dictyostelium_discoideum 1 1
Dictyostelium_purpureum_ 1 1
Selaginella_moellendorffii_ 10 10
Pinus_taeda   (Loblolly pine)   2 2
Picea_abies   (Norway spruce)   1 1
Eucalyptus_grandis_v201   (Rose gum)   4 4
Theobroma_cacao_B97-61/B2_v1   (Cacao)   5 5
Gossypium_raimondii_v221 12 12
Citrus_clementina_v165 5 5
Citrus_sinensis_v154   (Sweet orange)   13 13
Thellungiella_halophila_v173 8 8
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8 8
Capsella_rubella_v183 6 6
Arabidopsis_lyrata_   (Lyrate rockcress)   6 6
Arabidopsis_thaliana_10   (Thale cress)   8 8
Carica_papaya_   (Papaya)   4 4
Medicago_truncatula_   (Barrel medic)   7 7
Phaseolus_vulgaris_v186   (French bean)   5 5
Glycine_max_v109   (Soybean)   5 5
Cucumis_sativus_v122   (Cucumber)   7 7
Fragaria_vesca_   (Wild strawberry)   2 2
Malus_domestica_v196   (Apple)   3 3
Prunus_persica_v139   (Peach)   2 2
Linum_usitatissimum_v200   (Flax)   6 6
Manihot_esculenta_v147   (Cassava)   3 3
Populus_trichocarpa_v156   (Black cottonwood)   7 7
Vitis_vinifera_   (Wine grape)   5 5
Mimulus_guttatus_v140   (Spotted monkey flower)   3 3
Solanum_lycopersicum_v.2.3   (Tomato)   9 9
Solanum_tuberosum_   (Potato)   6 6
Actinidia_chinensis_Hongyang_ 2 2
Aquilegia_coerulea_v195 6 6
Triticum_urartu_22 9 9
Triticum_aestivum_22   (Bread wheat)   26 26
Aegilops_tauschii_22 8 8
Brachypodium_distachyon_   (Stiff brome)   10 10
Oryza_barthii_22   (African wild rice)   6 6
Oryza_meridionalis_22 10 10
Oryza_glumaepatula_22 7 7
Oryza_glaberrima   (African rice)   5 5
Oryza_punctata_22 17 13
Oryza_nivara_22 8 8
Oryza_brachyantha_22   (Malo sina)   6 6
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   8 8
Oryza_sativa_v193   (Rice)   8 8
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   7 7
Panicum_virgatum_v202   (Switchgrass)   9 9
Setaria_italica_v164   (Foxtail millet)   10 10
Zea_mays_subsp._mays_   (Maize)   7 7
Zea_mays_v181   (Maize)   5 5
Sorghum_bicolor_   (Sorghum)   9 8
Musa_balbisiana   (Balbis banana)   3 3
Musa_acuminata_22   (Wild Malaysian banana)   3 3
Amborella_trichopoda_22 6 6
Physcomitrella_patens 4 4
Coccomyxa_subellipsoidea_sp._C-169_v2 3 3
Asterochloris_sp._Cgr/DA1pho_v1.0 3 3
Chlorella_variabilis_sp._NC64A_ 2 2
Chlorella_vulgaris_ 3 3
Volvox_carteri_f._nagariensis_ 3 3
Volvox_carteri_v199 3 3
Chlamydomonas_reinhardtii_4.0 1 1
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 1 1
Porphyridium_purpureum_02_2012 1 1
Thecamonas_trahens_ATCC_50062_ 3 3
Bigelowiella_natans_CCMP2755_22 3 3
Ectocarpus_siliculosus 2 2
Aureococcus_anophagefferens_ 2 2
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 2 2
Pythium_ultimum_v1.7-2 2 2
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_infestans_T30-4_ 1 1
Phytophthora_capsici_ 2 2
Hyaloperonospora_arabidopsidis_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 2 2
Symbiodinium_minutum_clade_B1_v1.2 3 3
Naegleria_gruberi_ 3 3
Trichomonas_vaginalis_ 3 3
Guillardia_theta_CCMP2712_v1.0_ 1 1
Emiliania_huxleyi_CCMP1516_ 4 4
Thermobaculum_terrenum_ATCC_BAA-798 2 2
Microcoleus_sp._PCC_7113 1 1
Cyanothece_sp._PCC_8802 1 1
Gloeocapsa_sp._PCC_7428 1 1
Halothece_sp._PCC_7418 1 1
Rivularia_sp._PCC_7116 3 3
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 1 1
Nostoc_punctiforme_PCC_73102 2 2
Nostoc_sp._PCC_7524 1 1
Conexibacter_woesei_DSM_14684 5 5
Atopobium_parvulum_DSM_20469 1 1
Rubrobacter_xylanophilus_DSM_9941 4 4
Ilumatobacter_coccineus 5 5
Acidimicrobium_ferrooxidans_DSM_10331 2 2
Thermobispora_bispora_DSM_43833 3 3
Nakamurella_multipartita_DSM_44233 5 5
Acidothermus_cellulolyticus_11B 1 1
Modestobacter_marinus 7 7
Blastococcus_saxobsidens_DD2 6 6
Geodermatophilus_obscurus_DSM_43160 4 4
Kineococcus_radiotolerans_SRS30216 1 1
Catenulispora_acidiphila_DSM_44928 4 4
Stackebrandtia_nassauensis_DSM_44728 1 1
Frankia_symbiont_of_Datisca_glomerata 1 1
Frankia_sp._EAN1pec 3 3
Frankia_alni_ACN14a 3 3
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 3 3
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 7 7
Kitasatospora_setae_KM-6054 2 2
Streptomyces_coelicolor_A3(2) 5 5
Streptomyces_sp._PAMC26508 4 4
Streptomyces_flavogriseus_ATCC_33331 4 4
Streptomyces_sp._SirexAA-E 3 3
Streptomyces_griseus_subsp._griseus_NBRC_13350 5 5
Streptomyces_bingchenggensis_BCW-1 5 5
Streptomyces_violaceusniger_Tu_4113 9 9
Streptomyces_avermitilis_MA-4680 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4 4
Streptomyces_scabiei_87.22 5 5
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 5 5
Actinosynnema_mirum_DSM_43827 2 2
Saccharomonospora_viridis_DSM_43017 4 4
Pseudonocardia_dioxanivorans_CB1190 21 21
Saccharopolyspora_erythraea_NRRL_2338 10 10
Amycolatopsis_mediterranei_U32 9 9
Nocardioides_sp._JS614 10 10
Salinispora_arenicola_CNS-205 1 1
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 3 3
Actinoplanes_sp._SE50/110 1 1
Actinoplanes_missouriensis_431 3 3
Segniliparus_rotundus_DSM_44985 1 1
Tsukamurella_paurometabola_DSM_20162 1 1
Gordonia_sp._KTR9 2 2
Gordonia_polyisoprenivorans_VH2 1 1
Gordonia_bronchialis_DSM_43247 2 2
Rhodococcus_jostii_RHA1 6 6
Rhodococcus_equi_103S 3 3
Rhodococcus_opacus_B4 9 9
Rhodococcus_erythropolis_PR4 3 3
Nocardia_farcinica_IFM_10152 1 1
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_massiliense_str._GO_06 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_sp._JLS 3 3
Mycobacterium_vanbaalenii_PYR-1 3 3
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_africanum_GM041182 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_tuberculosis 1 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1
Mycobacterium_rhodesiae_NBB3 3 3
Mycobacterium_ulcerans_Agy99 4 4
Mycobacterium_gilvum_PYR-GCK 2 2
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_marinum_M 5 5
Mycobacterium_smegmatis_str._MC2_155 7 7
Corynebacterium_variabile_DSM_44702 1 1
Beutenbergia_cavernae_DSM_12333 1 1
Microbacterium_testaceum_StLB037 1 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1 1
Intrasporangium_calvum_DSM_43043 3 3
Cellulomonas_flavigena_DSM_20109 1 1
Arthrobacter_phenanthrenivorans_Sphe3 1 1
Arthrobacter_chlorophenolicus_A6 1 1
Arthrobacter_aurescens_TC1 2 2
Arthrobacter_arilaitensis_Re117 1 1
Kocuria_rhizophila_DC2201 1 1
Arthrobacter_sp._Rue61a 3 3
Arthrobacter_sp._FB24 2 2
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 4 4
Anaerolinea_thermophila_UNI-1 6 6
Thermomicrobium_roseum_DSM_5159 10 10
Sphaerobacter_thermophilus_DSM_20745 9 9
Roseiflexus_sp._RS-1 3 3
Roseiflexus_castenholzii_DSM_13941 3 3
Chloroflexus_sp._MS-G 3 3
Chloroflexus_sp._Y-400-fl 3 3
Chloroflexus_aggregans_DSM_9485 4 4
Chloroflexus_aurantiacus_J-10-fl 3 3
Truepera_radiovictrix_DSM_17093 1 1
Deinococcus_gobiensis_I-0 4 4
Deinococcus_geothermalis_DSM_11300 2 2
Deinococcus_proteolyticus_MRP 2 2
Deinococcus_radiodurans_R1 3 3
Meiothermus_silvanus_DSM_9946 3 3
Meiothermus_ruber_DSM_1279 4 4
Anaerococcus_prevotii_DSM_20548 2 2
Finegoldia_magna_ATCC_29328 1 1
Veillonella_parvula_DSM_2008 2 2
Megasphaera_elsdenii_DSM_20460 2 2
Megamonas_hypermegale 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 2 2
Ruminococcus_sp. 2 2
Thermaerobacter_marianensis_DSM_12885 4 4
Sulfobacillus_acidophilus_DSM_10332 7 7
Oscillibacter_valericigenes_Sjm18-20 7 7
butyrate-producing_bacterium_SS3/4 1 1
butyrate-producing_bacterium_SM4/1 1 1
Pelotomaculum_thermopropionicum_SI 3 3
Desulfosporosinus_acidiphilus_SJ4 6 6
Desulfosporosinus_orientis_DSM_765 11 11
Desulfitobacterium_hafniense_Y51 3 3
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Desulfotomaculum_reducens_MI-1 3 3
Desulfotomaculum_acetoxidans_DSM_771 2 2
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Acetobacterium_woodii_DSM_1030 6 6
Eubacterium_eligens_ATCC_27750 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_difficile_630 5 5
Clostridium_saccharolyticum_WM1 7 7
Clostridium_phytofermentans_ISDg 3 3
[Ruminococcus]_obeum 4 4
[Ruminococcus]_torques 4 4
Eubacterium_rectale_M104/1 1 1
Eubacterium_rectale_ATCC_33656 1 1
Coprococcus_sp._ART55/1 1 1
Roseburia_intestinalis 1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 2
Heliobacterium_modesticaldum_Ice1 2 2
Alkaliphilus_oremlandii_OhILAs 3 3
Alkaliphilus_metalliredigens_QYMF 5 5
Clostridium_ljungdahlii_DSM_13528 6 6
Clostridium_beijerinckii_NCIMB_8052 2 2
Clostridium_tetani_E88 1 1
Clostridium_botulinum_A_str._ATCC_3502 4 4
Tepidanaerobacter_acetatoxydans_Re1 1 1
Moorella_thermoacetica_ATCC_39073 3 3
Acetohalobium_arabaticum_DSM_5501 1 1
Halanaerobium_hydrogeniformans 2 2
Tetragenococcus_halophilus_NBRC_12172 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_faecalis_62 1 1
Kyrpidia_tusciae_DSM_2912 3 3
Paenibacillus_sp._JDR-2 1 1
Bacillus_selenitireducens_MLS10 1 1
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 2 2
Geobacillus_sp._GHH01 3 3
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_sp._JS 2 2
Bacillus_sp._1NLA3E 2 2
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_halodurans_C-125 2 2
Bacillus_clausii_KSM-K16 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_megaterium_DSM_319 1 1
Candidatus_Cloacamonas_acidaminovorans 3 3
Gemmatimonas_aurantiaca_T-27 1 1
Haliscomenobacter_hydrossis_DSM_1100 2 2
Niastella_koreensis_GR20-10 3 3
Chitinophaga_pinensis_DSM_2588 4 4
Rhodothermus_marinus_DSM_4252 2 2
Cyclobacterium_marinum_DSM_745 2 2
Fibrella_aestuarina 6 6
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 2 2
Spirosoma_linguale_DSM_74 6 6
Runella_slithyformis_DSM_19594 1 1
Zunongwangia_profunda_SM-A87 2 2
Gramella_forsetii_KT0803 2 2
Maribacter_sp._HTCC2170 2 2
Robiginitalea_biformata_HTCC2501 1 1
Zobellia_galactanivorans 1 1
Muricauda_ruestringensis_DSM_13258 1 1
Flavobacterium_johnsoniae_UW101 1 1
Phycisphaera_mikurensis_NBRC_102666 1 1
Isosphaera_pallida_ATCC_43644 1 1
Pirellula_staleyi_DSM_6068 1 1
Methylacidiphilum_infernorum_V4 1 1
Opitutus_terrae_PB90-1 2 2
Fretibacterium_fastidiosum 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 4 4
Anaerobaculum_mobile_DSM_13181 6 6
Turneriella_parva_DSM_21527 1 1
Brachyspira_murdochii_DSM_12563 2 2
Brachyspira_intermedia_PWS/A 2 2
Brachyspira_pilosicoli_95/1000 2 2
Brachyspira_hyodysenteriae_WA1 2 2
Spirochaeta_smaragdinae_DSM_11293 10 10
Sphaerochaeta_pleomorpha_str._Grapes 10 10
Sphaerochaeta_globus_str._Buddy 5 5
Sphaerochaeta_coccoides_DSM_17374 1 1
Spirochaeta_caldaria_DSM_7334 1 1
Treponema_azotonutricium_ZAS-9 1 1
Treponema_primitia_ZAS-2 1 1
Treponema_brennaborense_DSM_12168 1 1
Treponema_paraluiscuniculi_Cuniculi_A 1 1
Treponema_succinifaciens_DSM_2489 1 1
Treponema_pallidum_subsp._pallidum_SS14 2 2
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_africana_DSM_8902 1 1
Spirochaeta_thermophila_DSM_6192 1 1
Denitrovibrio_acetiphilus_DSM_12809 1 1
Marinitoga_piezophila_KA3 3 3
Petrotoga_mobilis_SJ95 2 2
Mesotoga_prima_MesG1.Ag.4.2 3 3
Kosmotoga_olearia_TBF_19.5.1 2 2
Thermosipho_melanesiensis_BI429 2 2
Thermosipho_africanus_TCF52B 2 2
Sulfurihydrogenibium_azorense_Az-Fu1 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Caldisericum_exile_AZM16c01 3 3
Candidatus_Solibacter_usitatus_Ellin6076 6 6
Granulicella_tundricola_MP5ACTX9 2 2
Granulicella_mallensis_MP5ACTX8 2 2
Candidatus_Koribacter_versatilis_Ellin345 2 2
Terriglobus_saanensis_SP1PR4 2 2
Terriglobus_roseus_DSM_18391 5 5
Acidobacterium_capsulatum_ATCC_51196 1 1
Sebaldella_termitidis_ATCC_33386 3 3
Ilyobacter_polytropus_DSM_2926 4 4
Acidithiobacillus_ferrivorans_SS3 1 1
Acidithiobacillus_caldus_SM-1 1 1
Acidithiobacillus_ferrooxidans_ATCC_53993 2 2
Bacteriovorax_marinus_SJ 1 1
Bdellovibrio_bacteriovorus_HD100 1 1
Sulfurospirillum_deleyianum_DSM_6946 1 1
Desulfarculus_baarsii_DSM_2075 1 1
Desulfomonile_tiedjei_DSM_6799 15 15
Syntrophobacter_fumaroxidans_MPOB 3 3
Desulfotalea_psychrophila_LSv54 4 4
Desulfobulbus_propionicus_DSM_2032 3 3
Desulfobacterium_autotrophicum_HRM2 3 3
Desulfohalobium_retbaense_DSM_5692 1 1
Desulfomicrobium_baculatum_DSM_4028 1 1
Desulfovibrio_piezophilus 3 3
Desulfovibrio_aespoeensis_Aspo-2 1 1
Desulfovibrio_magneticus_RS-1 2 2
Desulfovibrio_alaskensis_G20 1 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1 1
Desulfovibrio_salexigens_DSM_2638 1 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1 1
Desulfovibrio_africanus_str._Walvis_Bay 3 3
Geobacter_daltonii_FRC-32 1 1
Geobacter_sp._M21 1 1
Geobacter_uraniireducens_Rf4 1 1
Geobacter_lovleyi_SZ 1 1
Geobacter_metallireducens_GS-15 1 1
Pelobacter_propionicus_DSM_2379 3 3
Pelobacter_carbinolicus_DSM_2380 1 1
Haliangium_ochraceum_DSM_14365 6 6
Sorangium_cellulosum_'So_ce_56' 2 2
Stigmatella_aurantiaca_DW4/3-1 4 4
Corallococcus_coralloides_DSM_2259 2 2
Myxococcus_xanthus_DK_1622 1 1
Myxococcus_fulvus_HW-1 1 1
Thauera_sp._MZ1T 2 2
Azoarcus_sp._KH32C 1 1
Azoarcus_sp._BH72 1 1
Aromatoleum_aromaticum_EbN1 2 2
Pseudogulbenkiania_sp._NH8B 1 1
beta_proteobacterium_CB 1 1
Methylibium_petroleiphilum_PM1 2 2
Thiomonas_arsenitoxydans 1 1
Thiomonas_intermedia_K12 1 1
Rubrivivax_gelatinosus_IL144 2 2
Leptothrix_cholodnii_SP-6 1 1
Burkholderia_phytofirmans_PsJN 8 8
Burkholderia_phymatum_STM815 7 7
Burkholderia_xenovorans_LB400 13 13
Ralstonia_eutropha_JMP134 9 9
Cupriavidus_taiwanensis_LMG_19424 9 9
Cupriavidus_metallidurans_CH34 3 3
Cupriavidus_necator_N-1 7 7
Ralstonia_eutropha_H16 10 10
Ralstonia_pickettii_12D 4 4
Ralstonia_solanacearum_CFBP2957 2 2
Burkholderia_sp._RPE64 8 8
Burkholderia_sp._CCGE1002 6 6
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 6 6
Burkholderia_cenocepacia_HI2424 4 4
Burkholderia_multivorans_ATCC_17616 5 5
Burkholderia_vietnamiensis_G4 2 2
Burkholderia_gladioli_BSR3 3 3
Burkholderia_glumae_BGR1 1 1
Verminephrobacter_eiseniae_EF01-2 2 2
Alicycliphilus_denitrificans_K601 3 3
Ramlibacter_tataouinensis_TTB310 6 6
Delftia_sp._Cs1-4 7 7
Delftia_acidovorans_SPH-1 6 6
Polaromonas_sp._JS666 5 5
Polaromonas_naphthalenivorans_CJ2 2 2
Variovorax_paradoxus_S110 8 8
Acidovorax_ebreus_TPSY 1 1
Acidovorax_sp._KKS102 6 6
Acidovorax_sp._JS42 1 1
Acidovorax_citrulli_AAC00-1 4 4
Acidovorax_avenae_subsp._avenae_ATCC_19860 4 4
Comamonas_testosteroni_CNB-2 5 5
Collimonas_fungivorans_Ter331 4 4
Janthinobacterium_sp._Marseille 2 2
Herbaspirillum_seropedicae_SmR1 3 3
Pusillimonas_sp._T7-7 1 1
Advenella_kashmirensis_WT001 2 2
Bordetella_petrii_DSM_12804 2 2
Bordetella_avium_197N 5 5
Bordetella_pertussis_Tohama_I 2 2
Bordetella_parapertussis_12822 1 1
Bordetella_bronchiseptica_RB50 3 3
Achromobacter_xylosoxidans_A8 1 1
Achromobacter_xylosoxidans 1 1
Parvularcula_bermudensis_HTCC2503 1 1
Asticcacaulis_excentricus_CB_48 1 1
Caulobacter_sp._K31 2 2
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 3 3
Phenylobacterium_zucineum_HLK1 2 2
Erythrobacter_litoralis_HTCC2594 1 1
Novosphingobium_sp._PP1Y 2 2
Novosphingobium_aromaticivorans_DSM_12444 1 1
Sphingobium_sp._SYK-6 2 2
Sphingobium_japonicum_UT26S 1 1
Sphingobium_chlorophenolicum_L-1 1 1
Sphingomonas_sp._MM-1 3 3
Sphingomonas_wittichii_RW1 4 4
Hirschia_baltica_ATCC_49814 1 1
Hyphomonas_neptunium_ATCC_15444 1 1
Dinoroseobacter_shibae_DFL_12 7 7
Phaeobacter_gallaeciensis_2.10 5 5
Pseudovibrio_sp._FO-BEG1 3 3
Jannaschia_sp._CCS1 7 7
Ruegeria_sp._TM1040 4 4
Ruegeria_pomeroyi_DSS-3 7 7
Ketogulonicigenium_vulgare_Y25 2 2
Ketogulonigenium_vulgarum_WSH-001 1 1
Roseobacter_litoralis_Och_149 6 6
Roseobacter_denitrificans_OCh_114 4 4
Rhodobacter_sphaeroides_ATCC_17029 3 3
Rhodobacter_capsulatus_SB_1003 1 1
Paracoccus_denitrificans_PD1222 1 1
Tistrella_mobilis_KA081020-065 5 5
Magnetospirillum_magneticum_AMB-1 3 3
Rhodospirillum_centenum_SW 2 2
Rhodospirillum_rubrum_F11 1 1
Azospirillum_lipoferum_4B 5 5
Azospirillum_sp._B510 4 4
Azospirillum_brasilense_Sp245 5 5
Gluconacetobacter_xylinus_NBRC_3288 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Acidiphilium_multivorum_AIU301 10 10
Acidiphilium_cryptum_JF-5 10 10
Gluconobacter_oxydans_621H 3 3
Acetobacter_pasteurianus_IFO_3283-01 2 2
Polymorphum_gilvum_SL003B-26A1 7 7
Candidatus_Puniceispirillum_marinum_IMCC1322 3 3
alpha_proteobacterium_HIMB5 1 1
Starkeya_novella_DSM_506 4 4
Xanthobacter_autotrophicus_Py2 4 4
Azorhizobium_caulinodans_ORS_571 5 5
Methylobacterium_chloromethanicum_CM4 8 8
Methylobacterium_extorquens_AM1 6 6
Methylobacterium_sp._4-46 10 10
Methylobacterium_populi_BJ001 8 8
Methylobacterium_nodulans_ORS_2060 10 10
Methylobacterium_radiotolerans_JCM_2831 12 12
Parvibaculum_lavamentivorans_DS-1 2 2
Ochrobactrum_anthropi_ATCC_49188 1 1
Brucella_microti_CCM_4915 1 1
Brucella_pinnipedialis_B2/94 1 1
Brucella_canis_ATCC_23365 1 1
Brucella_suis_ATCC_23445 1 1
Brucella_melitensis_ATCC_23457 1 1
Brucella_abortus_S19 1 1
Sinorhizobium_fredii_NGR234 8 8
Sinorhizobium_medicae_WSM419 6 6
Sinorhizobium_meliloti_AK83 9 9
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 3 3
Rhizobium_etli_CIAT_652 1 1
Rhizobium_leguminosarum_bv._viciae_3841 3 3
Agrobacterium_tumefaciens_str._C58 2 2
Agrobacterium_radiobacter_K84 6 6
Agrobacterium_sp._H13-3 2 2
Agrobacterium_vitis_S4 4 4
Mesorhizobium_sp._BNC1 6 6
Mesorhizobium_opportunistum_WSM2075 9 9
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 10 10
Mesorhizobium_loti_MAFF303099 7 7
Methylocella_silvestris_BL2 2 2
Pelagibacterium_halotolerans_B2 1 1
Hyphomicrobium_sp._MC1 5 5
Oligotropha_carboxidovorans_OM4 3 3
Rhodopseudomonas_palustris_BisA53 5 5
Nitrobacter_winogradskyi_Nb-255 1 1
Nitrobacter_hamburgensis_X14 3 3
Bradyrhizobium_japonicum_USDA_110 12 12
Bradyrhizobium_sp._ORS_278 13 13
Methylocystis_sp._SC2 2 2
Teredinibacter_turnerae_T7901 1 1
Cellvibrio_japonicus_Ueda107 1 1
Oceanimonas_sp._GK1 1 1
Aeromonas_veronii_B565 2 2
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2 2
Vibrio_furnissii_NCTC_11218 1 1
Photobacterium_profundum_SS9 3 3
Psychromonas_ingrahamii_37 1 1
Shewanella_halifaxensis_HAW-EB4 2 2
Shewanella_denitrificans_OS217 2 2
Shewanella_baltica_OS185 1 1
Shewanella_violacea_DSS12 1 1
Shewanella_frigidimarina_NCIMB_400 2 2
Colwellia_psychrerythraea_34H 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Glaciecola_sp._4H-3-7+YE-5 1 1
Marinobacter_sp._BSs20148 1 1
Alteromonas_sp._SN2 2 2
Alteromonas_macleodii_str._'Deep_ecotype' 2 2
Hahella_chejuensis_KCTC_2396 1 1
Marinomonas_posidonica_IVIA-Po-181 1 1
Marinomonas_sp._MWYL1 1 1
Marinomonas_mediterranea_MMB-1 1 1
Chromohalobacter_salexigens_DSM_3043 2 2
Halomonas_elongata_DSM_2581 2 2
Methylomicrobium_alcaliphilum 1 1
Rhodanobacter_denitrificans 1 1
Frateuria_aurantia_DSM_6220 1 1
Pseudoxanthomonas_spadix_BD-a59 2 2
Stenotrophomonas_maltophilia_K279a 1 1
Xanthomonas_axonopodis_pv._citri_str._306 2 2
Xanthomonas_campestris_pv._campestris_str._B100 3 3
Halothiobacillus_neapolitanus_c2 1 1
Alkalilimnicola_ehrlichii_MLHE-1 1 1
Edwardsiella_ictaluri_93-146 2 2
Edwardsiella_tarda_EIB202 2 2
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 2 2
Serratia_sp._AS12 3 3
Serratia_plymuthica_AS9 3 3
Serratia_proteamaculans_568 4 4
Pantoea_sp._At-9b 3 3
Pantoea_vagans_C9-1 2 2
Pantoea_ananatis_LMG_20103 2 2
Erwinia_billingiae_Eb661 1 1
Escherichia_blattae_DSM_4481 1 1
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Enterobacteriaceae_bacterium_strain_FGI_57 1 1
Shigella_sonnei_Ss046 2 2
Shigella_flexneri_5_str._8401 1 1
Klebsiella_oxytoca_E718 1 1
Enterobacter_aerogenes_KCTC_2190 1 1
Escherichia_fergusonii_ATCC_35469 1 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 3 3
Citrobacter_rodentium_ICC168 2 2
Azotobacter_vinelandii_DJ 2 2
Pseudomonas_sp._TKP 3 3
Pseudomonas_sp._UW4 3 3
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 3 3
Pseudomonas_entomophila_L48 2 2
Pseudomonas_syringae_pv._tomato_str._DC3000 4 4
Pseudomonas_stutzeri_A1501 2 2
Pseudomonas_fulva_12-X 1 1
Pseudomonas_putida_F1 4 4
Pseudomonas_protegens_Pf-5 1 1
Pseudomonas_fluorescens_SBW25 3 3
Pseudomonas_mendocina_ymp 3 3
Pseudomonas_aeruginosa_UCBPP-PA14 3 3
Pseudomonas_sp._VLB120 1 1
Psychrobacter_sp._G 2 2
Psychrobacter_sp._PRwf-1 1 1
Psychrobacter_cryohalolentis_K5 2 2
Acinetobacter_oleivorans_DR1 1 1
Acinetobacter_calcoaceticus_PHEA-2 1 1
Acinetobacter_baumannii_ATCC_17978 1 1
Acinetobacter_sp._ADP1 1 1
Candidatus_Caldiarchaeum_subterraneum 15 15
Thermogladius_cellulolyticus_1633 3 3
Aeropyrum_pernix_K1 2 2
Thermosphaera_aggregans_DSM_11486 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_fermentans_DSM_16532 3 3
Desulfurococcus_kamchatkensis_1221n 3 3
Desulfurococcus_mucosus_DSM_2162 3 3
Metallosphaera_cuprina_Ar-4 6 6
Metallosphaera_sedula_DSM_5348 7 7
Acidianus_hospitalis_W1 3 3
Sulfolobus_tokodaii_str._7 9 9
Sulfolobus_islandicus_Y.N.15.51 9 9
Sulfolobus_solfataricus_P2 8 8
Sulfolobus_acidocaldarius_DSM_639 8 8
Vulcanisaeta_moutnovskia_768-28 4 4
Vulcanisaeta_distributa_DSM_14429 3 3
Pyrobaculum_sp._1860 2 2
Pyrobaculum_calidifontis_JCM_11548 1 1
Pyrobaculum_arsenaticum_DSM_13514 1 1
Pyrobaculum_oguniense_TE7 3 3
Thermoproteus_neutrophilus_V24Sta 1 1
Pyrobaculum_aerophilum_str._IM2 2 2
Pyrobaculum_islandicum_DSM_4184 1 1
Thermoproteus_uzoniensis_768-20 1 1
Thermoproteus_tenax_Kra_1 1 1
halophilic_archaeon_DL31 1 1
Picrophilus_torridus_DSM_9790 1 1
Haloterrigena_turkmenica_DSM_5511 2 2
Haloquadratum_walsbyi_DSM_16790 1 1
Haloferax_volcanii_DS2 1 1
Haloarcula_hispanica_ATCC_33960 2 2
Haloarcula_marismortui_ATCC_43049 2 2
Halalkalicoccus_jeotgali_B3 2 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   3 3
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   6 6
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   10 10
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3 3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3 3
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H143 2 2
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   5 5
Hordeum_vulgare_22   (Domesticated barley)   11 11
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   9 9
Chroococcidiopsis_thermalis_PCC_7203 2 2
Chamaesiphon_minutus_PCC_6605 1 1
Crinalium_epipsammum_PCC_9333 1 1
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._ATCC_51142 1 1
Cyanothece_sp._PCC_8801 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Cylindrospermum_stagnale_PCC_7417 1 1
Frankia_sp._EuI1c 3 3
Frankia_sp._CcI3 1 1
Nocardiopsis_alba_ATCC_BAA-2165 2 2
Streptomyces_albus_J1074 5 5
Streptomyces_rapamycinicus_NRRL_5491 10 10
Streptomyces_davawensis_JCM_4913 5 5
Streptomyces_fulvissimus_DSM_40593 5 5
Streptomyces_venezuelae_ATCC_10712 3 3
Streptomyces_collinus_Tu_365 5 5
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4 4
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 5 5
Saccharothrix_espanaensis_DSM_44229 4 4
Amycolatopsis_mediterranei_RB 9 9
Amycolatopsis_mediterranei_S699 9 9
Amycolatopsis_mediterranei_S699 9 9
Amycolatopsis_orientalis_HCCB10007 5 5
Actinoplanes_friuliensis_DSM_7358 4 4
Rhodococcus_pyridinivorans_SB3094 5 5
Rhodococcus_erythropolis_CCM2595 3 3
Nocardia_brasiliensis_ATCC_700358 3 3
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_liflandii_128FXT 3 3
Mycobacterium_sp._KMS 3 3
Mycobacterium_sp._MCS 3 3
Mycobacterium_canettii_CIPT_140070017 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_canettii_CIPT_140070008 1 1
Mycobacterium_canettii_CIPT_140070010 2 2
Mycobacterium_tuberculosis_EAI5/NITR206 1 1
Mycobacterium_tuberculosis_EAI5 1 1
Mycobacterium_tuberculosis_CAS/NITR204 1 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 1 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_CCDC5180 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_H37Ra 1 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1 1
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_H37Rv 1 1
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_bovis_AF2122/97 1 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1 1
Mycobacterium_bovis_BCG_str._Mexico 1 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_gilvum_Spyr1 2 2
Mycobacterium_smegmatis_str._MC2_155 7 7
Mycobacterium_kansasii_ATCC_12478 4 4
Corynebacterium_maris_DSM_45190 1 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Clavibacter_michiganensis_subsp._sepedonicus 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1 1
Deinococcus_peraridilitoris_DSM_19664 1 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1 1
Faecalibacterium_prausnitzii_L2-6 1 1
Sulfobacillus_acidophilus_TPY 7 7
Clostridium_acidurici_9a 3 3
Desulfosporosinus_meridiei_DSM_13257 8 8
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 12 12
Clostridium_difficile_BI1 5 5
Clostridium_difficile_R20291 5 5
Clostridium_difficile_CD196 5 5
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Coprococcus_catus_GD/7 4 4
Roseburia_intestinalis_XB6B4 1 1
Clostridium_sp._SY8519 4 4
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_autoethanogenum_DSM_10061 5 5
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 2 2
Clostridium_tetani_genome_12124569 1 1
Clostridium_pasteurianum_BC1 3 3
Clostridium_botulinum_H04402_065 4 4
Clostridium_botulinum_F_str._230613 4 4
Clostridium_botulinum_F_str._Langeland 4 4
Clostridium_botulinum_E3_str._Alaska_E43 4 4
Clostridium_botulinum_B1_str._Okra 4 4
Clostridium_botulinum_Ba4_str._657 3 3
Clostridium_botulinum_A2_str._Kyoto 3 3
Clostridium_botulinum_A3_str._Loch_Maree 4 4
Clostridium_botulinum_A_str._Hall 4 4
Clostridium_botulinum_A_str._ATCC_19397 4 4
Halobacteroides_halobius_DSM_5150 2 2
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Paenibacillus_mucilaginosus_KNP414 1 1
Paenibacillus_mucilaginosus_K02 1 1
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y4.1MC1 2 2
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_megaterium_QM_B1551 1 1
Rhodothermus_marinus_SG0.5JP17-172 2 2
Emticicia_oligotrophica_DSM_17448 1 1
Singulisphaera_acidiphila_DSM_18658 2 2
Brachyspira_pilosicoli_WesB 2 2
Brachyspira_pilosicoli_B2904 2 2
Brachyspira_pilosicoli_P43/6/78 2 2
Treponema_pedis_str._T_A4 1 1
Treponema_pallidum_str._Fribourg-Blanc 1 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1 1
Spirochaeta_thermophila_DSM_6578 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Acidithiobacillus_ferrooxidans_ATCC_23270 2 2
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Desulfocapsa_sulfexigens_DSM_10523 2 2
Desulfobacula_toluolica_Tol2 4 4
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2
Desulfovibrio_vulgaris_RCH1 1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1 1
Desulfovibrio_vulgaris_str._Hildenborough 1 1
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 3 3
Desulfovibrio_desulfuricans_ND132 1 1
Sorangium_cellulosum_So0157-2 2 2
Myxococcus_stipitatus_DSM_14675 1 1
Burkholderia_phenoliruptrix_BR3459a 8 8
Pandoraea_pnomenusa_3kgm 2 2
Ralstonia_pickettii_12J 4 4
Ralstonia_solanacearum_FQY_4 2 2
Ralstonia_solanacearum_Po82 2 2
Ralstonia_solanacearum_PSI07 2 2
Ralstonia_solanacearum_CMR15 2 2
Ralstonia_solanacearum_GMI1000 2 2
Burkholderia_sp._YI23 11 11
Burkholderia_sp._CCGE1003 8 8
Burkholderia_sp._CCGE1001 7 7
Burkholderia_sp._KJ006 2 2
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 2 2
Burkholderia_ambifaria_MC40-6 6 6
Burkholderia_cenocepacia_MC0-3 4 4
Burkholderia_cenocepacia_AU_1054 4 4
Burkholderia_cenocepacia_J2315 5 5
Burkholderia_multivorans_ATCC_17616 5 5
Burkholderia_cepacia_GG4 2 2
Alicycliphilus_denitrificans_BC 2 2
Variovorax_paradoxus_B4 7 7
Variovorax_paradoxus_EPS 6 6
Bordetella_pertussis_CS 2 2
Bordetella_parapertussis_18323 2 2
Bordetella_bronchiseptica_MO149 3 3
Bordetella_bronchiseptica_253 3 3
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Caulobacter_crescentus_CB15 1 1
Phaeobacter_gallaeciensis_DSM_17395 5 5
Phaeobacter_gallaeciensis_DSM_26640 6 6
Leisingera_methylohalidivorans_DSM_14336 4 4
Octadecabacter_antarcticus_307 6 6
Octadecabacter_arcticus_238 6 6
Rhodobacter_sphaeroides_KD131 3 3
Rhodobacter_sphaeroides_ATCC_17025 3 3
Rhodobacter_sphaeroides_2.4.1 3 3
Paracoccus_aminophilus_JCM_7686 1 1
Rhodospirillum_rubrum_ATCC_11170 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Gluconobacter_oxydans_H24 3 3
Acetobacter_pasteurianus_386B 3 3
Acetobacter_pasteurianus_IFO_3283-12 2 2
Acetobacter_pasteurianus_IFO_3283-01-42C 2 2
Acetobacter_pasteurianus_IFO_3283-32 2 2
Acetobacter_pasteurianus_IFO_3283-26 2 2
Acetobacter_pasteurianus_IFO_3283-22 2 2
Acetobacter_pasteurianus_IFO_3283-07 2 2
Acetobacter_pasteurianus_IFO_3283-03 2 2
Methylobacterium_extorquens_DM4 7 7
Methylobacterium_extorquens_PA1 6 6
Brucella_ceti_TE10759-12 1 1
Brucella_ceti_TE28753-12 1 1
Brucella_canis_HSK_A52141 1 1
Brucella_suis_VBI22 1 1
Brucella_suis_1330 1 1
Brucella_suis_1330 1 1
Brucella_melitensis_NI 1 1
Brucella_melitensis_M5-90 1 1
Brucella_melitensis_M28 1 1
Brucella_melitensis_bv._1_str._16M 1 1
Brucella_abortus_A13334 1 1
Brucella_abortus_bv._1_str._9-941 1 1
Sinorhizobium_fredii_USDA_257 6 6
Sinorhizobium_fredii_HH103 5 5
Sinorhizobium_meliloti_2011 7 7
Sinorhizobium_meliloti_GR4 11 11
Sinorhizobium_meliloti_Rm41 10 10
Sinorhizobium_meliloti_SM11 10 10
Sinorhizobium_meliloti_BL225C 9 9
Sinorhizobium_meliloti_1021 10 10
Rhizobium_etli_CFN_42 1 1
Rhizobium_etli_bv._mimosae_str._Mim1 1 1
Rhizobium_tropici_CIAT_899 8 8
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 3 3
Mesorhizobium_australicum_WSM2073 9 9
Oligotropha_carboxidovorans_OM5 3 3
Oligotropha_carboxidovorans_OM5 3 3
Rhodopseudomonas_palustris_DX-1 6 6
Rhodopseudomonas_palustris_TIE-1 5 5
Rhodopseudomonas_palustris_HaA2 10 10
Rhodopseudomonas_palustris_BisB5 6 6
Rhodopseudomonas_palustris_BisB18 7 7
Rhodopseudomonas_palustris_CGA009 5 5
Bradyrhizobium_sp._S23321 14 14
Bradyrhizobium_sp._BTAi1 15 15
Bradyrhizobium_oligotrophicum_S58 15 15
Bradyrhizobium_japonicum_USDA_6 14 14
Aeromonas_hydrophila_ML09-119 2 2
Vibrio_sp._EJY3 1 1
Vibrio_nigripulchritudo_VibrioScope 1 1
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS117 1 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 1 1
Shewanella_baltica_OS155 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_U8' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_U7' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_U4' 2 2
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 2 2
Alteromonas_macleodii_str._'English_Channel_615' 2 2
Alteromonas_macleodii_AltDE1 2 2
Alteromonas_macleodii_str._'English_Channel_673' 2 2
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 2 2
Alteromonas_macleodii_str._'Black_Sea_11' 2 2
Alteromonas_macleodii_ATCC_27126 2 2
Alcanivorax_dieselolei_B5 2 2
Thalassolituus_oleivorans_MIL-1 1 1
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 1 1
Stenotrophomonas_maltophilia_R551-3 1 1
Xanthomonas_citri_subsp._citri_Aw12879 2 2
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2 2
Xanthomonas_axonopodis_pv._citrumelo_F1 2 2
Xanthomonas_axonopodis_Xac29-1 2 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 1 1
Xanthomonas_campestris_pv._raphani_756C 3 3
Xanthomonas_campestris_pv._campestris_str._8004 3 3
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 3 3
Thioalkalivibrio_nitratireducens_DSM_14787 1 1
Morganella_morganii_subsp._morganii_KT 2 2
Edwardsiella_tarda_C07-087 2 2
Edwardsiella_tarda_FL6-60 2 2
Rahnella_aquatilis_HX2 1 1
Serratia_sp._AS13 3 3
Serratia_plymuthica_S13 3 3
Serratia_plymuthica_4Rx13 3 3
Serratia_marcescens_FGI94 3 3
Serratia_marcescens_WW4 3 3
Serratia_liquefaciens_ATCC_27592 4 4
Pantoea_ananatis_LMG_5342 2 2
Pantoea_ananatis_PA13 2 2
Pantoea_ananatis_AJ13355 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Raoultella_ornithinolytica_B6 1 1
Shigella_sonnei_53G 2 2
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 1 1
Shigella_boydii_Sb227 1 1
Klebsiella_oxytoca_KCTC_1686 1 1
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_E24377A 3 3
Escherichia_coli_E._coli_PMV-1 2 2
Escherichia_coli_JJ1886 2 2
Escherichia_coli_LY180 3 3
Escherichia_coli_APEC_O78 3 3
Escherichia_coli_O7:K1_str._CE10 2 2
Escherichia_coli_O104:H4_str._2009EL-2050 3 3
Escherichia_coli_O104:H4_str._2009EL-2071 3 3
Escherichia_coli_O104:H4_str._2011C-3493 3 3
Escherichia_coli_NA114 2 2
Escherichia_coli_P12b 2 2
Escherichia_coli_str._'clone_D_i2' 2 2
Escherichia_coli_str._'clone_D_i14' 2 2
Escherichia_coli_UM146 2 2
Escherichia_coli_042 2 2
Escherichia_coli_Xuzhou21 3 3
Escherichia_coli_IHE3034 2 2
Escherichia_coli_UMNK88 3 3
Escherichia_coli_O83:H1_str._NRG_857C 2 2
Escherichia_coli_ABU_83972 2 2
Escherichia_coli_KO11FL 3 3
Escherichia_coli_KO11FL 3 3
Escherichia_coli_LF82 2 2
Escherichia_coli_ED1a 2 2
Escherichia_coli_IAI39 2 2
Escherichia_coli_UMN026 3 3
Escherichia_coli_55989 3 3
Escherichia_coli_S88 2 2
Escherichia_coli_IAI1 3 3
Escherichia_coli_W 3 3
Escherichia_coli_W 3 3
Escherichia_coli_DH1 3 3
Escherichia_coli_DH1 3 3
Escherichia_coli_ATCC_8739 3 3
Escherichia_coli_BL21(DE3) 3 3
Escherichia_coli_BL21(DE3) 3 3
Escherichia_coli_SMS-3-5 2 2
Escherichia_coli_SE15 2 2
Escherichia_coli_SE11 3 3
Escherichia_coli_APEC_O1 2 2
Escherichia_coli_O103:H2_str._12009 3 3
Escherichia_coli_UTI89 2 2
Escherichia_coli_536 2 2
Escherichia_coli_HS 2 2
Escherichia_coli_ETEC_H10407 3 3
Escherichia_coli_O55:H7_str._RM12579 3 3
Escherichia_coli_O55:H7_str._CB9615 3 3
Escherichia_coli_O26:H11_str._11368 3 3
Escherichia_coli_CFT073 2 2
Escherichia_coli_O111:H-_str._11128 2 2
Escherichia_coli_O127:H6_str._E2348/69 1 1
Escherichia_coli_O157:H7_str._TW14359 3 3
Escherichia_coli_O157:H7_str._EC4115 3 3
Escherichia_coli_O157:H7_str._Sakai 3 3
Escherichia_coli_O157:H7_str._EDL933 3 3
Escherichia_coli_str._K-12_substr._MDS42 2 2
Escherichia_coli_BW2952 2 2
Escherichia_coli_str._K-12_substr._MG1655 3 3
Escherichia_coli_str._K-12_substr._W3110 3 3
Escherichia_coli_str._K-12_substr._DH10B 3 3
Escherichia_coli_B_str._REL606 3 3
Enterobacter_cloacae_SCF1 3 3
Azotobacter_vinelandii_CA6 2 2
Azotobacter_vinelandii_CA 2 2
Pseudomonas_denitrificans_ATCC_13867 4 4
Pseudomonas_syringae_pv._phaseolicola_1448A 2 2
Pseudomonas_syringae_pv._syringae_B728a 3 3
Pseudomonas_stutzeri_CCUG_29243 3 3
Pseudomonas_stutzeri_DSM_10701 2 2
Pseudomonas_stutzeri_DSM_4166 2 2
Pseudomonas_stutzeri_RCH2 2 2
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 2 2
Pseudomonas_monteilii_SB3101 4 4
Pseudomonas_monteilii_SB3078 4 4
Pseudomonas_putida_H8234 5 5
Pseudomonas_putida_HB3267 2 2
Pseudomonas_putida_NBRC_14164 4 4
Pseudomonas_putida_DOT-T1E 5 5
Pseudomonas_putida_S16 3 3
Pseudomonas_putida_BIRD-1 4 4
Pseudomonas_putida_W619 4 4
Pseudomonas_putida_ND6 4 4
Pseudomonas_putida_KT2440 3 3
Pseudomonas_putida_GB-1 3 3
Pseudomonas_protegens_CHA0 1 1
Pseudomonas_poae_RE*1-1-14 2 2
Pseudomonas_fluorescens_F113 2 2
Pseudomonas_fluorescens_A506 3 3
Pseudomonas_fluorescens_R124 3 3
Pseudomonas_fluorescens_Pf0-1 3 3
Pseudomonas_resinovorans_NBRC_106553 3 3
Pseudomonas_mendocina_NK-01 1 1
Pseudomonas_aeruginosa_SCV20265 3 3
Pseudomonas_aeruginosa_MTB-1 3 3
Pseudomonas_aeruginosa_LES431 3 3
Pseudomonas_aeruginosa_RP73 3 3
Pseudomonas_aeruginosa_B136-33 3 3
Pseudomonas_aeruginosa_PA1R 3 3
Pseudomonas_aeruginosa_PA1 3 3
Pseudomonas_aeruginosa_DK2 1 1
Pseudomonas_aeruginosa_NCGM2.S1 3 3
Pseudomonas_aeruginosa_M18 3 3
Pseudomonas_aeruginosa_LESB58 3 3
Pseudomonas_aeruginosa_PA7 3 3
Pseudomonas_aeruginosa_PAO1 3 3
Acinetobacter_genomosp._13TU__RUH2624 1 1
Acinetobacter_sp.__SH024 1 1
Acinetobacter_calcoaceticus_ruh2202 1 1
Acinetobacter_baumannii_ZW85-1 1 1
Acinetobacter_baumannii_TYTH-1 1 1
Acinetobacter_baumannii_BJAB0868 1 1
Acinetobacter_baumannii_BJAB0715 1 1
Acinetobacter_baumannii_BJAB07104 1 1
Acinetobacter_baumannii_TCDC-AB0715 1 1
Acinetobacter_baumannii_D1279779 1 1
Acinetobacter_baumannii_MDR-TJ 1 1
Acinetobacter_baumannii_1656-2 1 1
Acinetobacter_baumannii__ATCC_19606 1 1
Acinetobacter_baumannii_AB307-0294 1 1
Acinetobacter_baumannii_AYE 1 1
Acinetobacter_baumannii_SDF 1 1
Acinetobacter_baumannii_MDR-ZJ06 1 1
Acinetobacter_baumannii_AB0057 1 1
Acinetobacter_baumannii_ACICU 1 1
Aeropyrum_camini_SY1_=_JCM_12091 2 2
Sulfolobus_islandicus_LAL14/1 8 8
Sulfolobus_islandicus_REY15A 8 8
Sulfolobus_islandicus_HVE10/4 9 9
Sulfolobus_islandicus_Y.G.57.14 10 10
Sulfolobus_islandicus_L.S.2.15 9 9
Sulfolobus_islandicus_M.16.27 9 9
Sulfolobus_islandicus_M.14.25 9 9
Sulfolobus_islandicus_M.16.4 8 8
Sulfolobus_islandicus_L.D.8.5 8 8
Sulfolobus_solfataricus_98/2 8 8
Sulfolobus_acidocaldarius_SUSAZ 9 9
Sulfolobus_acidocaldarius_Ron12/I 8 8
Sulfolobus_acidocaldarius_N8 7 7
Ferroplasma_acidarmanus_fer1 2 2
Natronococcus_occultus_SP4 1 1
Haloquadratum_walsbyi_C23 2 2
Natronomonas_moolapensis_8.8.11 1 1
Haloarcula_hispanica_N601 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   2 2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   2 2
Gorilla_gorilla_69_3.1   (Western gorilla)   2 2
Pongo_abelii_69_2   (Sumatran orangutan)   2 2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1 1
Macaca_mulatta_69_1   (Rhesus monkey)   4 4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   3 3
Otolemur_garnettii_69_3   (Small-eared galago)   4 4
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   5 5
Mus_musculus_69_38   (House mouse)   5 5
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   4 4
Cavia_porcellus_69_3   (Domestic guinea pig)   3 3
Oryctolagus_cuniculus_69_2   (Rabbit)   4 4
Ochotona_princeps_69   (American pika)   2 2
Tupaia_belangeri_69   (Northern tree shrew)   2 2
Sus_scrofa_69_10.2   (Pig)   3 3
Bos_taurus_69_3.1   (Cattle)   4 4
Vicugna_pacos_69_1   (Alpaca)   2 2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   3 3
Ailuropoda_melanoleuca_69_1   (Giant panda)   4 4
Canis_familiaris_69_3.1   (Dog)   3 3
Felis_catus_69   (Domestic cat)   2 2
Equus_caballus_69_2   (Horse)   7 7
Myotis_lucifugus_69_2.0   (Little brown bat)   4 4
Pteropus_vampyrus_69_1   (Large flying fox)   2 2
Sorex_araneus_69_1   (European shrew)   2 2
Erinaceus_europaeus_69   (Western European hedgehog)   2 2
Procavia_capensis_69_1   (Cape rock hyrax)   2 2
Loxodonta_africana_69_3   (African savanna elephant)   4 4
Echinops_telfairi_69   (Small Madagascar hedgehog)   2 2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   2 2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   2 2
Macropus_eugenii_69_1.0   (Tammar wallaby)   2 2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5 5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   3 3
Ornithorhynchus_anatinus_69_5   (Platypus)   8 8
Petromyzon_marinus_69_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_69_2   (Turkey)   2 2
Gallus_gallus_69_2   (Chicken)   3 3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2 2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_69_2.0   (Green anole)   3 3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   2 2
Latimeria_chalumnae_69_1   (Coelacanth)   2 2
Gadus_morhua_69_1   (Atlantic cod)   2 2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   3 3
Takifugu_rubripes_69_4   (Torafugu)   2 2
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2 2
Oryzias_latipes_69_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2 2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2 2
Danio_rerio_69_9   (Zebrafish)   3 3
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4 4
Ciona_intestinalis_69   (Vase tunicate)   3 3
Drosophila_melanogaster_69_5   (Fruit fly)   5 5
Caenorhabditis_elegans_69_215   (Roundworm)   3 3
Arabidopsis_thaliana_10   (Thale cress)   6 6

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2 2
Homo_sapiens__(NCBI_version)   (Human)   2 2
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   5 5
Heliconius_numata__(Incomplete) 1 1
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   3 3
Ricinus_communis__(Early_assembly)   (Castor bean)   7 7
Nicotiana_benthamiana_0.4.4_(Early_draft) 6 6
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   7 7
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   9 9
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1
NCBI_plasmid_sequences_(Plasmids) 154 154
STRING_v9.0.5_(STRING) 1464 1463
Uniprot_2018_03_genome 35688 35601
NCBI_2017_08_genome 90264 90250
Protein_Data_Bank_(all_PDB_sequenc) 139 139
Protozoadb_2010_08_(Protozoadb) 6 6
PDB_chains_(SCOP_1.75)_(PDB) 11 11
TargetDB__(Targets) 56 56
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 330 330

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