SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for POZ domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a POZ domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   609 587
Pan_troglodytes_76_2.1.4   (Chimpanzee)   192 183
Gorilla_gorilla_76_3.1   (Western gorilla)   254 244
Pongo_abelii_76_2   (Sumatran orangutan)   197 186
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   184 173
Papio_anubis_76   (Olive baboon)   193 185
Macaca_mulatta_76_1   (Rhesus monkey)   259 246
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   344 328
Otolemur_garnettii_76_3   (Small-eared galago)   199 189
Microcebus_murinus_76_1   (Gray mouse lemur)   131 125
Rattus_norvegicus_76_5.0   (Norway rat)   228 215
Mus_musculus_76_38   (House mouse)   472 455
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   145 138
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   184 177
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   172 163
Cavia_porcellus_76_3   (Domestic guinea pig)   201 191
Oryctolagus_cuniculus_76_2   (Rabbit)   196 184
Ochotona_princeps_76   (American pika)   143 134
Tupaia_belangeri_76   (Northern tree shrew)   108 102
Sus_scrofa_76_10.2   (Pig)   203 194
Bos_taurus_76_3.1   (Cattle)   205 192
Ovis_aries_76_3.1   (Sheep)   194 183
Vicugna_pacos_76_1   (Alpaca)   94 89
Tursiops_truncatus_76_1   (Bottlenose dolphin)   167 158
Mustela_putorius_furo_76_1.0   (Domestic ferret)   189 180
Ailuropoda_melanoleuca_76_1   (Giant panda)   193 184
Canis_familiaris_76_3.1   (Dog)   228 217
Felis_catus_76_6.2   (Domestic cat)   189 178
Equus_caballus_76_2   (Horse)   186 174
Myotis_lucifugus_76_2.0   (Little brown bat)   205 196
Pteropus_vampyrus_76_1   (Large flying fox)   163 155
Sorex_araneus_76_1   (European shrew)   104 99
Erinaceus_europaeus_76   (Western European hedgehog)   118 113
Procavia_capensis_76_1   (Cape rock hyrax)   137 132
Loxodonta_africana_76_3   (African savanna elephant)   231 218
Echinops_telfairi_76   (Small Madagascar hedgehog)   135 128
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   224 212
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   95 91
Macropus_eugenii_76_1.0   (Tammar wallaby)   140 132
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   188 179
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   205 194
Ornithorhynchus_anatinus_76_5   (Platypus)   157 150
Saccoglossus_kowalevskii_v3.0 194 170
Petromyzon_marinus_76_7.0   (Sea lamprey)   87 83
Meleagris_gallopavo_76_2   (Turkey)   164 154
Gallus_gallus_76_4   (Chicken)   172 165
Anas_platyrhynchos_76_1.0   (Mallard)   165 158
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   159 153
Ficedula_albicollis_76_1.0   (Collared flycatcher)   170 163
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   194 182
Anolis_carolinensis_76_2.0   (Green anole)   184 174
Xenopus_laevis_   (African clawed frog)   251 240
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   194 186
Latimeria_chalumnae_76_1   (Coelacanth)   239 227
Lepisosteus_oculatus_76   (Spotted gar)   224 209
Gadus_morhua_76_1   (Atlantic cod)   209 202
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   214 206
Takifugu_rubripes_76_4   (Torafugu)   492 477
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   274 265
Oryzias_latipes_76_1   (Japanese medaka)   249 240
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   228 220
Poecilia_formosa_76   (Amazon molly)   232 223
Oreochromis_niloticus_76_1.0   (Nile tilapia)   265 255
Astyanax_mexicanus_76   (Mexican tetra)   233 221
Danio_rerio_76_9   (Zebrafish)   365 350
Oikopleura_dioica 64 64
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   98 96
Ciona_intestinalis_76   (Vase tunicate)   108 104
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   156 118
Adineta_vaga 176 171
Octopus_bimaculoides_280 132 127
Crassostrea_gigas_22   (Pacific oyster)   156 146
Lottia_gigantea_   (Owl limpet)   118 114
Helobdella_robusta_ 92 91
Capitella_sp._I_ 388 375
Danaus_plexippus_OGS1.0   (Monarch butterfly)   74 70
Heliconius_melpomene_   (Postman butterfly)   64 63
Bombyx_mori_   (Domestic silkworm)   61 61
Nasonia_vitripennis_   (Jewel wasp)   130 127
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   159 151
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   70 67
Linepithema_humile_v1.1   (Argentine ant)   73 69
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   66 64
Solenopsis_invicta_v.2.2.3   (Red fire ant)   67 64
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   81 77
Atta_cephalotes_v1.1 73 70
Camponotus_floridanus_v3.3   (Florida carpenter ant)   99 90
Lucilia_cuprina   (Australian sheep blowfly)   54 50
Drosophila_grimshawi_1.3 94 90
Drosophila_willistoni_1.3 92 88
Drosophila_pseudoobscura_2.13 125 120
Drosophila_persimilis_1.3 114 109
Drosophila_suzukii 97 88
Drosophila_yakuba_1.3 86 82
Drosophila_simulans_1.3 74 69
Drosophila_sechellia_1.3 82 78
Drosophila_melanogaster_76_5   (Fruit fly)   308 297
Drosophila_erecta_1.3 88 84
Drosophila_ananassae_1.3 91 87
Drosophila_virilis_1.2 95 91
Drosophila_mojavensis_1.3 93 89
Megaselia_scalaris_22 43 42
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   117 111
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   103 99
Anopheles_darlingi_22   (American malaria mosquito)   56 52
Anopheles_gambiae_49_3j   (African malaria mosquito)   123 119
Tribolium_castaneum_3.0   (Red flour beetle)   83 79
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   82 78
Acyrthosiphon_pisum_   (Pea aphid)   149 146
Rhodnius_prolixus_22 81 80
Daphnia_pulex_   (Common water flea)   268 232
Strigamia_maritima_22 155 147
Sarcoptes_scabiei 36 35
Tetranychus_urticae_   (Two-spotted spider mite)   133 129
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   62 59
Pristionchus_pacificus_ 190 164
Meloidogyne_incognita_   (Southern root-knot nematode)   95 94
Meloidogyne_hapla_ 77 75
Onchocerca_volvulus_22 55 52
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   87 84
Caenorhabditis_japonica_ 63 62
Caenorhabditis_brenneri_ 349 326
Caenorhabditis_remanei_ 407 376
Caenorhabditis_elegans_76_235   (Roundworm)   250 244
Caenorhabditis_briggsae_2 192 180
Trichinella_spiralis_22 35 34
Hymenolepis_microstoma_ 58 58
Echinococcus_multilocularis_ 39 38
Echinococcus_granulosus_ 37 36
Taenia_solium_   (Pork tapeworm)   51 50
Schistosoma_mansoni_ 40 40
Mnemiopsis_leidyi   (Sea walnut)   166 158
Thelohanellus_kitauei 3 3
Acropora_digitifera_v1.0 199 185
Nematostella_vectensis_1.0   (Starlet sea anemone)   171 162
Hydra_vulgaris 78 75
Amphimedon_queenslandica 49 44
Trichoplax_adhaerens_ 42 40
Proterospongia_sp._ATCC_50818_ 22 22
Monosiga_brevicollis_ 14 13
Sphaeroforma_arctica_JP610_ 10 10
Capsaspora_owczarzaki_ATCC_30864_ 23 18
Conidiobolus_coronatus_NRRL28638_v1.0 13 12
Mortierella_verticillata_NRRL_6337_ 49 46
Phycomyces_blakesleeanus_ 48 45
Rhizopus_oryzae_RA_99-880_ 30 27
Mucor_circinelloides_ 26 23
Rhizomucor_miehei_CAU432_ 25 21
Malassezia_globosa_CBS_7966_ 10 10
Sporisorium_reilianum_22 11 10
Ustilago_maydis_ 9 8
Mixia_osmundae_IAM_14324_v1.0 8 7
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 10 10
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 8 8
Melampsora_laricis-populina_ 11 11
Rhodotorula_graminis_WP1_v1.0 8 7
Sporobolomyces_roseus_IAM_13481_ 8 8
Microbotryum_violaceum_22 11 11
Wallemia_sebi_v1.0 5 5
Sphaerobolus_stellatus_v1.0 62 60
Piloderma_croceum_F_1598_v1.0 72 71
Serpula_lacrymans_var._lacrymans_S7.9_ 33 33
Coniophora_puteana 59 56
Hydnomerulius_pinastri_v2.0 48 48
Paxillus_rubicundulus_Ve08.2h10_v1.0 26 25
Pisolithus_microcarpus_441_v1.0 42 41
Pisolithus_tinctorius_Marx_270_v1.0 62 60
Scleroderma_citrinum_Foug_A_v1.0 37 35
Coprinopsis_cinerea_okayama7_130_v3 47 45
Pleurotus_ostreatus_   (Oyster mushroom)   37 32
Amanita_thiersii_Skay4041_v1.0 36 34
Amanita_muscaria_Koide_v1.0   (Fly agaric)   44 42
Galerina_marginata_v1.0 101 100
Hebeloma_cylindrosporum_h7_v2.0 46 44
Laccaria_bicolor_S238N-H82_ 46 43
Agaricus_bisporus_var._bisporus_ 53 52
Schizophyllum_commune_ 62 52
Stereum_hirsutum_FP-91666_SS1__v1.0 76 73
Heterobasidion_annosum_ 39 38
Gloeophyllum_trabeumv1.0 40 40
Punctularia_strigosozonata_v1.0 54 53
Sebacina_vermifera_MAFF_305830_v1.0 65 64
Fomitiporia_mediterranea_v1.0 34 33
Tulasnella_calospora_AL13/4D_v1.0 49 47
Postia_placenta_ 94 72
Wolfiporia_cocos_MD-104_SS10__v1.0 51 48
Fomitopsis_pinicolav1.0 93 87
Fomitopsis_pinicola_FP-58527_SS1_v3.0 92 87
Phanerochaete_chrysosporium_RP-78_2.1 42 42
Dichomitus_squalens 69 63
Trametes_versicolor_v1.0 101 98
Tremella_mesenterica_   (Witches' butter)   16 15
Daldinia_eschscholzii_EC12_v1.0 17 16
Apiospora_montagnei_NRRL_25634_v1.0 30 29
Magnaporthe_poae_ATCC_64411_22 18 17
Magnaporthe_grisea_70-15_ 22 21
Podospora_anserina_ 19 18
Sporotrichum_thermophile_ATCC_42464_ 20 19
Thielavia_terrestris_NRRL_8126_ 17 16
Chaetomium_globosum_CBS_148.51_ 20 19
Neurospora_tetrasperma_ 21 19
Neurospora_discreta_FGSC_8579_ 20 18
Neurospora_crassa_OR74A_ 23 21
Cryphonectria_parasitica_   (Chestnut blight fungus)   19 18
Verticillium_albo-atrum_VaMs.102_ 14 14
Verticillium_dahliae_VdLs.17_ 18 17
Acremonium_alcalophilumv_1.0 13 12
Glomerella_graminicola_22 26 25
Fusarium_graminearum_ 31 29
Nectria_haematococca_mpVI_ 25 24
Fusarium_oxysporum_f._sp._lycopersici_4286_ 34 33
Fusarium_verticillioides_7600_ 29 28
Trichoderma_asperellum_CBS_433.97_v1.0 21 20
Trichoderma_atroviride_ 21 20
Trichoderma_citrinoviride_v1.0 19 18
Trichoderma_reesei_1.2 19 18
Trichoderma_virens_Gv29-8_ 22 21
Trichoderma_longibrachiatum_ATCC_18648_v1.0 22 21
Trichoderma_harzianum_CBS_226.95_v1.0 22 21
Amorphotheca_resinae_v1.0   (Creosote fungus)   25 23
Botrytis_cinerea_B05.10_ 52 51
Sclerotinia_sclerotiorum_ 29 28
Blumeria_graminis_22 9 8
Didymella_exigua_CBS_183.55_v1.0 30 28
Leptosphaeria_maculans_22 34 32
Setosphaeria_turcica_v1.0 39 37
Cochliobolus_miyabeanus_ATCC_44560_v1.0 36 34
Cochliobolus_victoriae_FI3_v1.0 39 37
Cochliobolus_carbonum_26-R-13_v1.0 36 35
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   23 22
Alternaria_brassicicola_ 20 19
Cochliobolus_lunatus_m118_v2.0 26 24
Pyrenophora_teres_f._teres_22 38 34
Pyrenophora_tritici-repentis_ 40 38
Stagonospora_nodorum_ 58 57
Mycosphaerella_graminicola_IPO323_ 41 37
Zasmidium_cellare_ATCC_36951_v1.0 77 73
Dothistroma_septosporum 46 45
Septoria_musiva_v1.0 25 24
Mycosphaerella_fijiensis_CIRAD86_ 34 32
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 43 42
Paracoccidioides_brasiliensis_Pb18_ 14 13
Coccidioides_posadasii_RMSCC_3488_ 20 18
Coccidioides_immitis_RS_ 22 20
Ajellomyces_dermatitidis_SLH14081_ 19 17
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 17 15
Microsporum_canis_CBS_113480_ 18 16
Trichophyton_equinum_CBS_127.97_ 14 12
Trichophyton_verrucosum_HKI_0517_ 12 12
Arthroderma_benhamiae_CBS_112371_ 14 13
Trichophyton_tonsurans_CBS_112818_ 16 14
Trichophyton_rubrum_CBS_118892_ 15 13
Uncinocarpus_reesii_1704_ 20 19
Aspergillus_zonatus_v1.0 18 16
Penicillium_chrysogenum_Wisconsin_54-1255_ 18 16
Penicillium_chrysogenum_v1.0 24 22
Aspergillus_acidus_v1.0 20 18
Aspergillus_fumigatus_Af293 14 13
Aspergillus_brasiliensis_v1.0 20 18
Aspergillus_nidulans_FGSC_A4_ 15 15
Aspergillus_sydowii_v1.0 24 23
Aspergillus_versicolor_v1.0 22 21
Aspergillus_glaucus 22 20
Aspergillus_carbonarius_ITEM_5010_ 17 16
Neosartorya_fischeri_NRRL_181_ 16 14
Aspergillus_terreus_NIH2624_ 18 17
Aspergillus_tubingensis_v1.0 16 14
Aspergillus_wentii_v1.0 27 25
Aspergillus_oryzae_RIB40_ 15 13
Aspergillus_niger_22 16 14
Aspergillus_niger_ATCC_1015_ 10 9
Aspergillus_flavus_NRRL3357_ 17 16
Aspergillus_clavatus_NRRL_1_ 17 15
Penicillium_marneffei_ATCC_18224_ 22 21
Tuber_melanosporum_Mel28_22 17 14
Tuber_melanosporum_Vittad_   (Perigord truffle)   18 15
Hansenula_polymorpha_v2.0 9 7
Dekkera_bruxellensis_CBS_2499_v2.0 9 7
Pichia_membranifaciensv1.0 8 7
Candida_tanzawaensis_NRRL_Y-17324__v1.0 9 7
Candida_dubliniensis_CD36_ 9 7
Candida_tropicalis_MYA-3404_ 9 7
Candida_parapsilosis_ 9 7
Candida_albicans_SC5314 10 8
Lodderomyces_elongisporus_NRRL_YB-4239_ 9 7
Babjeviella_inositovora_NRRL_Y-12698_v1.0 8 6
Pichia_stipitis_CBS_6054_ 9 7
Candida_guilliermondii_ATCC_6260_ 8 6
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 10 8
Debaromyces_hansenii 9 7
Wickerhamomyces_anomalus 9 7
Pichia_pastoris_GS115_ 5 4
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3 2
Yarrowia_lipolytica_CLIB122 27 25
Candida_lusitaniae_ATCC_42720_ 8 6
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 5 4
Vanderwaltozyma_polyspora_DSM_70294_ 8 7
Candida_glabrata_CBS138 7 6
Kluyveromyces_thermotolerans_CBS_6340 7 6
Lachancea_kluyveri_ 8 6
Kluyveromyces_waltii 7 6
Ashbya_gossypii_ATCC_10895_ 6 5
Zygosaccharomyces_rouxii_ 6 5
Saccharomyces_mikatae_MIT 8 6
Saccharomyces_paradoxus_MIT 8 6
Saccharomyces_cerevisiae_76   (Baker's yeast)   9 6
Saccharomyces_bayanus_MIT 8 6
Kluyveromyces_lactis 8 6
Schizosaccharomyces_cryophilus_OY26_22 8 6
Schizosaccharomyces_octosporus_yFS286_ 8 6
Schizosaccharomyces_japonicus_yFS275_ 8 6
Schizosaccharomyces_pombe   (Fission yeast)   8 6
Catenaria_anguillulae_PL171_v1.0 30 30
Allomyces_macrogynus_ATCC_38327_ 30 29
Spizellomyces_punctatus_DAOM_BR117_ 17 15
Dictyostelium_discoideum 43 38
Dictyostelium_purpureum_ 37 34
Entamoeba_dispar_1.2 9 9
Entamoeba_invadens_1.2 8 8
Entamoeba_histolytica_1 10 10
Selaginella_moellendorffii_ 85 82
Pinus_taeda   (Loblolly pine)   124 114
Picea_abies   (Norway spruce)   68 66
Eucalyptus_grandis_v201   (Rose gum)   123 117
Theobroma_cacao_B97-61/B2_v1   (Cacao)   73 70
Gossypium_raimondii_v221 236 232
Citrus_clementina_v165 145 140
Citrus_sinensis_v154   (Sweet orange)   168 163
Thellungiella_halophila_v173 119 117
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   136 132
Capsella_rubella_v183 117 115
Arabidopsis_lyrata_   (Lyrate rockcress)   97 95
Arabidopsis_thaliana_10   (Thale cress)   136 128
Carica_papaya_   (Papaya)   66 64
Medicago_truncatula_   (Barrel medic)   191 183
Phaseolus_vulgaris_v186   (French bean)   116 111
Glycine_max_v109   (Soybean)   180 174
Cucumis_sativus_v122   (Cucumber)   81 78
Fragaria_vesca_   (Wild strawberry)   91 88
Malus_domestica_v196   (Apple)   174 169
Prunus_persica_v139   (Peach)   84 82
Linum_usitatissimum_v200   (Flax)   126 122
Manihot_esculenta_v147   (Cassava)   103 102
Populus_trichocarpa_v156   (Black cottonwood)   131 127
Vitis_vinifera_   (Wine grape)   66 65
Mimulus_guttatus_v140   (Spotted monkey flower)   85 83
Solanum_lycopersicum_v.2.3   (Tomato)   92 90
Solanum_tuberosum_   (Potato)   159 155
Actinidia_chinensis_Hongyang_ 96 94
Aquilegia_coerulea_v195 162 149
Triticum_urartu_22 196 174
Triticum_aestivum_22   (Bread wheat)   353 342
Aegilops_tauschii_22 369 351
Brachypodium_distachyon_   (Stiff brome)   139 136
Oryza_barthii_22   (African wild rice)   239 173
Oryza_meridionalis_22 208 150
Oryza_glumaepatula_22 236 188
Oryza_glaberrima   (African rice)   159 158
Oryza_punctata_22 191 157
Oryza_nivara_22 246 188
Oryza_brachyantha_22   (Malo sina)   112 108
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   235 229
Oryza_sativa_v193   (Rice)   235 229
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   115 109
Panicum_virgatum_v202   (Switchgrass)   413 404
Setaria_italica_v164   (Foxtail millet)   194 191
Zea_mays_subsp._mays_   (Maize)   161 158
Zea_mays_v181   (Maize)   178 175
Sorghum_bicolor_   (Sorghum)   187 179
Musa_balbisiana   (Balbis banana)   120 117
Musa_acuminata_22   (Wild Malaysian banana)   115 112
Amborella_trichopoda_22 57 54
Physcomitrella_patens 77 74
Coccomyxa_subellipsoidea_sp._C-169_v2 17 16
Asterochloris_sp._Cgr/DA1pho_v1.0 12 12
Chlorella_variabilis_sp._NC64A_ 9 9
Chlorella_vulgaris_ 19 17
Volvox_carteri_f._nagariensis_ 30 30
Volvox_carteri_v199 24 24
Chlamydomonas_reinhardtii_4.0 46 46
Ostreococcus_sp._RCC809_ 3 3
Ostreococcus_lucimarinus_CCE9901_ 4 4
Ostreococcus_tauri_ 5 5
Bathycoccus_prasinos_ 4 4
Micromonas_sp._RCC299_ 6 6
Micromonas_pusilla_CCMP1545_v3.0 8 8
Cyanidioschyzon_merolae_strain_10D_22 5 4
Cyanidioschyzon_merolae 5 4
Porphyridium_purpureum_02_2012 10 10
Thecamonas_trahens_ATCC_50062_ 28 26
Bigelowiella_natans_CCMP2755_22 26 26
Giardia_lamblia_2.3 1 1
Cyanophora_paradoxa_ 38 38
Leishmania_mexicana_2.4 11 10
Leishmania_major_strain_Friedlin_ 11 10
Leishmania_infantum_JPCM5_2.4 11 10
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 12 11
Trypanosoma_vivax_ 14 13
Trypanosoma_cruzi_strain_CL_Brener 13 12
Trypanosoma_congolense_2.4 18 17
Trypanosoma_brucei_gambiense_v4.1 15 14
Trypanosoma_brucei_TREU927_v4.1 14 13
Ectocarpus_siliculosus 30 28
Aureococcus_anophagefferens_ 14 14
Albugo_laibachii_22 31 29
Pythium_iwayamai_DAOM_BR242034_22 18 17
Pythium_arrhenomanes_ATCC_12531_22 16 15
Pythium_ultimum_v1.7-2 20 18
Pythium_aphanidermatum_DAOM_BR444_22 16 16
Pythium_irregulare_DAOM_BR486_22 21 19
Pythium_vexans_DAOM_BR484_22 21 19
Phytophthora_ramorum_1.1   (Sudden oak death agent)   21 20
Phytophthora_sojae_1.1 19 18
Phytophthora_infestans_T30-4_ 22 20
Phytophthora_capsici_ 19 18
Hyaloperonospora_arabidopsidis_22 14 13
Phaeodactylum_tricornutumCCAP_1055/1 16 15
Fragilariopsis_cylindrus 78 78
Thalassiosira_pseudonana_CCMP1335 23 23
Perkinsus_marinus_ATCC_50983_ 29 29
Paramecium_tetraurelia_ 27 27
Tetrahymena_thermophila_SB210_1_ 13 12
Ichthyophthirius_multifiliis_strain_G5_ 4 4
Cryptosporidium_hominis 5 5
Cryptosporidium_muris 7 7
Cryptosporidium_parvum_Iowa_II 5 5
Neospora_caninum 13 13
Toxoplasma_gondii_VEG 14 13
Toxoplasma_gondii_ME49 15 14
Toxoplasma_gondii_GT1 15 14
Babesia_bovis_T2Bo_ 8 8
Theileria_parva__ 4 4
Theileria_annulata 4 4
Plasmodium_falciparum_3D7_ 3 3
Plasmodium_vivax_SaI-1_7.0 4 4
Plasmodium_knowlesi_strain_H_ 4 4
Plasmodium_yoelii_ssp._yoelii_1_ 3 3
Plasmodium_chabaudi_ 4 4
Plasmodium_berghei_ANKA_ 4 4
Symbiodinium_minutum_clade_B1_v1.2 149 124
Naegleria_gruberi_ 173 152
Trichomonas_vaginalis_ 48 48
Guillardia_theta_CCMP2712_v1.0_ 31 29
Emiliania_huxleyi_CCMP1516_ 227 210
Candidatus_Protochlamydia_amoebophila_UWE25 42 42
Parachlamydia_acanthamoebae_UV-7 2 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   295 285
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   257 250
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   130 126
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   65 62
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   222 216
Cryptococcus_neoformans_var._grubii_H99_ 11 10
Cryptococcus_neoformans_B-3501A_ 9 8
Cryptococcus_neoformans_JEC21_ 5 5
Paracoccidioides_brasiliensis_Pb01_ 15 14
Paracoccidioides_brasiliensis_Pb03_ 16 15
Coccidioides_posadasii_str._Silveira_ 18 17
Coccidioides_immitis_RMSCC_3703_ 18 18
Coccidioides_immitis_RMSCC_2394_ 18 16
Coccidioides_immitis_H538.4_ 14 13
Ajellomyces_dermatitidis_ER-3_ 18 16
Histoplasma_capsulatum_H143 18 16
Histoplasma_capsulatum_H88 20 18
Histoplasma_capsulatum_G186AR 21 19
Aspergillus_fumigatus_A1163_ 18 17
Candida_albicans_WO-1_ 9 7
Saccharomyces_cerevisiae_UC5 9 6
Saccharomyces_cerevisiae_PW5 8 6
Saccharomyces_cerevisiae_FL100 6 4
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 7 4
Saccharomyces_cerevisiae_CBS7960 8 5
Saccharomyces_cerevisiae_YJM269 7 4
Saccharomyces_cerevisiae_T7 9 6
Saccharomyces_cerevisiae_FostersB 6 5
Saccharomyces_cerevisiae_FostersO 7 5
Saccharomyces_cerevisiae_VL3 8 6
Saccharomyces_cerevisiae_Vin13 8 6
Saccharomyces_cerevisiae_LalvinQA23 7 5
Saccharomyces_cerevisiae_AWRI796 4 4
Saccharomyces_cerevisiae_Sigma1278b 9 6
Saccharomyces_cerevisiae_W303 9 6
Saccharomyces_cerevisiae_JAY291 9 6
Saccharomyces_cerevisiae_AWRI1631 7 5
Saccharomyces_cerevisiae_YPS163 5 3
Saccharomyces_cerevisiae_M22 5 3
Saccharomyces_cerevisiae_T73 6 4
Saccharomyces_cerevisiae_CLIB215 8 6
Saccharomyces_cerevisiae_Y10 5 4
Saccharomyces_cerevisiae_YJM789_ 9 6
Saccharomyces_cerevisiae_YJM789 9 6
Saccharomyces_cerevisiae_RM11-1a 9 6
Saccharomyces_cerevisiae_RM11-1a_ 9 6
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   9 6
Schizosaccharomyces_pombe_972h-_ 8 6
Batrachochytrium_dendrobatidis_JEL423_ 11 10
Batrachochytrium_dendrobatidis_JAM81_ 13 12
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   72 69
Hordeum_vulgare_22   (Domesticated barley)   204 187
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   235 227
Trypanosoma_brucei_Lister_427_v4.1 13 12
Neospora_caninum_Nc-Liverpool_6.2 13 13
Plasmodium_falciparum_HB3_ 2 2
Plasmodium_falciparum_Dd2_ 2 2

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   208 198
Pan_troglodytes_69_2.1.4   (Chimpanzee)   185 176
Gorilla_gorilla_69_3.1   (Western gorilla)   189 181
Pongo_abelii_69_2   (Sumatran orangutan)   189 179
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   171 161
Macaca_mulatta_69_1   (Rhesus monkey)   186 176
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   187 178
Otolemur_garnettii_69_3   (Small-eared galago)   198 188
Microcebus_murinus_69_1   (Gray mouse lemur)   131 125
Rattus_norvegicus_69_3.4   (Norway rat)   195 186
Mus_musculus_69_38   (House mouse)   245 234
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   144 137
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   181 174
Cavia_porcellus_69_3   (Domestic guinea pig)   199 190
Oryctolagus_cuniculus_69_2   (Rabbit)   181 171
Ochotona_princeps_69   (American pika)   143 134
Tupaia_belangeri_69   (Northern tree shrew)   108 102
Sus_scrofa_69_10.2   (Pig)   185 176
Bos_taurus_69_3.1   (Cattle)   195 183
Vicugna_pacos_69_1   (Alpaca)   93 88
Tursiops_truncatus_69_1   (Bottlenose dolphin)   166 157
Mustela_putorius_furo_69_1.0   (Domestic ferret)   189 180
Ailuropoda_melanoleuca_69_1   (Giant panda)   181 172
Canis_familiaris_69_3.1   (Dog)   185 176
Felis_catus_69   (Domestic cat)   113 107
Equus_caballus_69_2   (Horse)   173 163
Myotis_lucifugus_69_2.0   (Little brown bat)   199 190
Pteropus_vampyrus_69_1   (Large flying fox)   162 154
Sorex_araneus_69_1   (European shrew)   104 99
Erinaceus_europaeus_69   (Western European hedgehog)   118 113
Procavia_capensis_69_1   (Cape rock hyrax)   137 132
Loxodonta_africana_69_3   (African savanna elephant)   182 172
Echinops_telfairi_69   (Small Madagascar hedgehog)   135 128
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   116 109
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   95 91
Macropus_eugenii_69_1.0   (Tammar wallaby)   140 132
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   167 160
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   195 184
Ornithorhynchus_anatinus_69_5   (Platypus)   141 136
Petromyzon_marinus_69_7.0   (Sea lamprey)   81 77
Meleagris_gallopavo_69_2   (Turkey)   151 143
Gallus_gallus_69_2   (Chicken)   166 157
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   158 152
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   175 165
Anolis_carolinensis_69_2.0   (Green anole)   175 166
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   176 169
Latimeria_chalumnae_69_1   (Coelacanth)   202 193
Gadus_morhua_69_1   (Atlantic cod)   197 190
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   205 197
Takifugu_rubripes_69_4   (Torafugu)   216 208
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   207 200
Oryzias_latipes_69_1   (Japanese medaka)   191 184
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   228 220
Oreochromis_niloticus_69_1.0   (Nile tilapia)   235 227
Danio_rerio_69_9   (Zebrafish)   241 229
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   65 63
Ciona_intestinalis_69   (Vase tunicate)   103 100
Drosophila_melanogaster_69_5   (Fruit fly)   89 85
Caenorhabditis_elegans_69_215   (Roundworm)   182 177
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   9 6
Arabidopsis_thaliana_10   (Thale cress)   105 101

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   632 610
Homo_sapiens__(NCBI_version)   (Human)   288 273
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   232 222
Heliconius_numata__(Incomplete) 20 20
Loa_loa_v3.3_(Request)   (Eye worm)   65 62
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   50 48
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   53 50
Moniliophthora_perniciosa_FA553__(Genome_survey) 6 6
Encephalitozoon_intestinalis__(endoparasite) 1 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   9 9
Lotus_japonicus__(Early_assembly) 84 81
Malus_x_domestica_(Duplicate)   (Apple)   174 169
Ricinus_communis__(Early_assembly)   (Castor bean)   71 68
Nicotiana_benthamiana_0.4.4_(Early_draft) 175 165
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   91 89
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   92 90
Phoenix_dactylifera__(Early_draft)   (Date palm)   53 51
NCBI_viral_sequences_(Viral) 178 173
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1076 1076
UniProt__viral_sequences_(Viral) 170 169
Protozoadb_2010_08_(Protozoadb) 329 320
STRING_v9.0.5_(STRING) 10662 10094
Uniprot_2018_03_genome 105779 100007
NCBI_2017_08_genome 136594 129679
TargetDB__(Targets) 391 374
Protein_Data_Bank_(all_PDB_sequenc) 555 549
PDB_chains_(SCOP_1.75)_(PDB) 24 24

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