SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for POZ domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a POZ domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   609 587
Pan_troglodytes_76_2.1.4   (Chimpanzee)   192 183
Gorilla_gorilla_76_3.1   (Western gorilla)   254 244
Pongo_abelii_76_2   (Sumatran orangutan)   197 186
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   184 173
Papio_anubis_76   (Olive baboon)   193 185
Macaca_mulatta_76_1   (Rhesus monkey)   259 246
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   344 328
Otolemur_garnettii_76_3   (Small-eared galago)   199 189
Microcebus_murinus_76_1   (Gray mouse lemur)   131 125
Rattus_norvegicus_76_5.0   (Norway rat)   228 215
Mus_musculus_76_38   (House mouse)   472 455
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   145 138
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   184 177
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   172 163
Cavia_porcellus_76_3   (Domestic guinea pig)   201 191
Oryctolagus_cuniculus_76_2   (Rabbit)   196 184
Ochotona_princeps_76   (American pika)   143 134
Tupaia_belangeri_76   (Northern tree shrew)   108 102
Sus_scrofa_76_10.2   (Pig)   203 194
Bos_taurus_76_3.1   (Cattle)   205 192
Ovis_aries_76_3.1   (Sheep)   194 183
Vicugna_pacos_76_1   (Alpaca)   94 89
Tursiops_truncatus_76_1   (Bottlenose dolphin)   167 158
Mustela_putorius_furo_76_1.0   (Domestic ferret)   189 180
Ailuropoda_melanoleuca_76_1   (Giant panda)   193 184
Canis_familiaris_76_3.1   (Dog)   228 217
Felis_catus_76_6.2   (Domestic cat)   189 178
Equus_caballus_76_2   (Horse)   186 174
Myotis_lucifugus_76_2.0   (Little brown bat)   205 196
Pteropus_vampyrus_76_1   (Large flying fox)   163 155
Sorex_araneus_76_1   (European shrew)   104 99
Erinaceus_europaeus_76   (Western European hedgehog)   118 113
Procavia_capensis_76_1   (Cape rock hyrax)   137 132
Loxodonta_africana_76_3   (African savanna elephant)   231 218
Echinops_telfairi_76   (Small Madagascar hedgehog)   135 128
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   224 212
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   95 91
Macropus_eugenii_76_1.0   (Tammar wallaby)   140 132
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   188 179
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   205 194
Ornithorhynchus_anatinus_76_5   (Platypus)   157 150
Saccoglossus_kowalevskii_v3.0 194 170
Petromyzon_marinus_76_7.0   (Sea lamprey)   87 83
Meleagris_gallopavo_76_2   (Turkey)   164 154
Gallus_gallus_76_4   (Chicken)   172 165
Anas_platyrhynchos_76_1.0   (Mallard)   165 158
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   159 153
Ficedula_albicollis_76_1.0   (Collared flycatcher)   170 163
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   194 182
Anolis_carolinensis_76_2.0   (Green anole)   184 174
Xenopus_laevis_   (African clawed frog)   251 240
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   194 186
Latimeria_chalumnae_76_1   (Coelacanth)   239 227
Lepisosteus_oculatus_76   (Spotted gar)   224 209
Gadus_morhua_76_1   (Atlantic cod)   209 202
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   214 206
Takifugu_rubripes_76_4   (Torafugu)   492 477
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   274 265
Oryzias_latipes_76_1   (Japanese medaka)   249 240
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   228 220
Poecilia_formosa_76   (Amazon molly)   232 223
Oreochromis_niloticus_76_1.0   (Nile tilapia)   265 255
Astyanax_mexicanus_76   (Mexican tetra)   233 221
Danio_rerio_76_9   (Zebrafish)   365 350
Oikopleura_dioica 64 64
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   98 96
Ciona_intestinalis_76   (Vase tunicate)   108 104
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   156 118
Adineta_vaga 176 171
Octopus_bimaculoides_280 132 127
Crassostrea_gigas_22   (Pacific oyster)   156 146
Lottia_gigantea_   (Owl limpet)   118 114
Helobdella_robusta_ 92 91
Capitella_sp._I_ 388 375
Danaus_plexippus_OGS1.0   (Monarch butterfly)   74 70
Heliconius_melpomene_   (Postman butterfly)   64 63
Bombyx_mori_   (Domestic silkworm)   61 61
Nasonia_vitripennis_   (Jewel wasp)   130 127
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   159 151
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   70 67
Linepithema_humile_v1.1   (Argentine ant)   73 69
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   66 64
Solenopsis_invicta_v.2.2.3   (Red fire ant)   67 64
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   81 77
Atta_cephalotes_v1.1 73 70
Camponotus_floridanus_v3.3   (Florida carpenter ant)   99 90
Lucilia_cuprina   (Australian sheep blowfly)   54 50
Drosophila_grimshawi_1.3 94 90
Drosophila_willistoni_1.3 92 88
Drosophila_pseudoobscura_2.13 125 120
Drosophila_persimilis_1.3 114 109
Drosophila_suzukii 97 88
Drosophila_yakuba_1.3 86 82
Drosophila_simulans_1.3 74 69
Drosophila_sechellia_1.3 82 78
Drosophila_melanogaster_76_5   (Fruit fly)   308 297
Drosophila_erecta_1.3 88 84
Drosophila_ananassae_1.3 91 87
Drosophila_virilis_1.2 95 91
Drosophila_mojavensis_1.3 93 89
Megaselia_scalaris_22 43 42
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   117 111
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   103 99
Anopheles_darlingi_22   (American malaria mosquito)   56 52
Anopheles_gambiae_49_3j   (African malaria mosquito)   123 119
Tribolium_castaneum_3.0   (Red flour beetle)   83 79
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   82 78
Acyrthosiphon_pisum_   (Pea aphid)   149 146
Rhodnius_prolixus_22 81 80
Daphnia_pulex_   (Common water flea)   268 232
Strigamia_maritima_22 155 147
Sarcoptes_scabiei 36 35
Tetranychus_urticae_   (Two-spotted spider mite)   133 129
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   62 59
Pristionchus_pacificus_ 190 164
Meloidogyne_incognita_   (Southern root-knot nematode)   95 94
Meloidogyne_hapla_ 77 75
Onchocerca_volvulus_22 55 52
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   87 84
Caenorhabditis_japonica_ 63 62
Caenorhabditis_brenneri_ 349 326
Caenorhabditis_remanei_ 407 376
Caenorhabditis_elegans_76_235   (Roundworm)   250 244
Caenorhabditis_briggsae_2 192 180
Trichinella_spiralis_22 35 34
Hymenolepis_microstoma_ 58 58
Echinococcus_multilocularis_ 39 38
Echinococcus_granulosus_ 37 36
Taenia_solium_   (Pork tapeworm)   51 50
Schistosoma_mansoni_ 40 40
Mnemiopsis_leidyi   (Sea walnut)   166 158
Thelohanellus_kitauei 3 3
Acropora_digitifera_v1.0 199 185
Nematostella_vectensis_1.0   (Starlet sea anemone)   171 162
Hydra_vulgaris 78 75
Amphimedon_queenslandica 49 44
Trichoplax_adhaerens_ 42 40
Proterospongia_sp._ATCC_50818_ 22 22
Monosiga_brevicollis_ 14 13
Sphaeroforma_arctica_JP610_ 10 10
Capsaspora_owczarzaki_ATCC_30864_ 23 18
Conidiobolus_coronatus_NRRL28638_v1.0 13 12
Mortierella_verticillata_NRRL_6337_ 49 46
Phycomyces_blakesleeanus_ 48 45
Rhizopus_oryzae_RA_99-880_ 30 27
Mucor_circinelloides_ 26 23
Rhizomucor_miehei_CAU432_ 25 21
Malassezia_globosa_CBS_7966_ 10 10
Sporisorium_reilianum_22 11 10
Ustilago_maydis_ 9 8
Mixia_osmundae_IAM_14324_v1.0 8 7
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 10 10
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 8 8
Melampsora_laricis-populina_ 11 11
Rhodotorula_graminis_WP1_v1.0 8 7
Sporobolomyces_roseus_IAM_13481_ 8 8
Microbotryum_violaceum_22 11 11
Wallemia_sebi_v1.0 5 5
Sphaerobolus_stellatus_v1.0 62 60
Piloderma_croceum_F_1598_v1.0 72 71
Serpula_lacrymans_var._lacrymans_S7.9_ 33 33
Coniophora_puteana 59 56
Hydnomerulius_pinastri_v2.0 48 48
Paxillus_rubicundulus_Ve08.2h10_v1.0 26 25
Pisolithus_microcarpus_441_v1.0 42 41
Pisolithus_tinctorius_Marx_270_v1.0 62 60
Scleroderma_citrinum_Foug_A_v1.0 37 35
Coprinopsis_cinerea_okayama7_130_v3 47 45
Pleurotus_ostreatus_   (Oyster mushroom)   37 32
Amanita_thiersii_Skay4041_v1.0 36 34
Amanita_muscaria_Koide_v1.0   (Fly agaric)   44 42
Galerina_marginata_v1.0 101 100
Hebeloma_cylindrosporum_h7_v2.0 46 44
Laccaria_bicolor_S238N-H82_ 46 43
Agaricus_bisporus_var._bisporus_ 53 52
Schizophyllum_commune_ 62 52
Stereum_hirsutum_FP-91666_SS1__v1.0 76 73
Heterobasidion_annosum_ 39 38
Gloeophyllum_trabeumv1.0 40 40
Punctularia_strigosozonata_v1.0 54 53
Sebacina_vermifera_MAFF_305830_v1.0 65 64
Fomitiporia_mediterranea_v1.0 34 33
Tulasnella_calospora_AL13/4D_v1.0 49 47
Postia_placenta_ 94 72
Wolfiporia_cocos_MD-104_SS10__v1.0 51 48
Fomitopsis_pinicolav1.0 93 87
Fomitopsis_pinicola_FP-58527_SS1_v3.0 92 87
Phanerochaete_chrysosporium_RP-78_2.1 42 42
Dichomitus_squalens 69 63
Trametes_versicolor_v1.0 101 98
Tremella_mesenterica_   (Witches' butter)   16 15
Daldinia_eschscholzii_EC12_v1.0 17 16
Apiospora_montagnei_NRRL_25634_v1.0 30 29
Magnaporthe_poae_ATCC_64411_22 18 17
Magnaporthe_grisea_70-15_ 22 21
Podospora_anserina_ 19 18
Sporotrichum_thermophile_ATCC_42464_ 20 19
Thielavia_terrestris_NRRL_8126_ 17 16
Chaetomium_globosum_CBS_148.51_ 20 19
Neurospora_tetrasperma_ 21 19
Neurospora_discreta_FGSC_8579_ 20 18
Neurospora_crassa_OR74A_ 23 21
Cryphonectria_parasitica_   (Chestnut blight fungus)   19 18
Verticillium_albo-atrum_VaMs.102_ 14 14
Verticillium_dahliae_VdLs.17_ 18 17
Acremonium_alcalophilumv_1.0 13 12
Glomerella_graminicola_22 26 25
Fusarium_graminearum_ 31 29
Nectria_haematococca_mpVI_ 25 24
Fusarium_oxysporum_f._sp._lycopersici_4286_ 34 33
Fusarium_verticillioides_7600_ 29 28
Trichoderma_asperellum_CBS_433.97_v1.0 21 20
Trichoderma_atroviride_ 21 20
Trichoderma_citrinoviride_v1.0 19 18
Trichoderma_reesei_1.2 19 18
Trichoderma_virens_Gv29-8_ 22 21
Trichoderma_longibrachiatum_ATCC_18648_v1.0 22 21
Trichoderma_harzianum_CBS_226.95_v1.0 22 21
Amorphotheca_resinae_v1.0   (Creosote fungus)   25 23
Botrytis_cinerea_B05.10_ 52 51
Sclerotinia_sclerotiorum_ 29 28
Blumeria_graminis_22 9 8
Didymella_exigua_CBS_183.55_v1.0 30 28
Leptosphaeria_maculans_22 34 32
Setosphaeria_turcica_v1.0 39 37
Cochliobolus_miyabeanus_ATCC_44560_v1.0 36 34
Cochliobolus_victoriae_FI3_v1.0 39 37
Cochliobolus_carbonum_26-R-13_v1.0 36 35
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   23 22
Alternaria_brassicicola_ 20 19
Cochliobolus_lunatus_m118_v2.0 26 24
Pyrenophora_teres_f._teres_22 38 34
Pyrenophora_tritici-repentis_ 40 38
Stagonospora_nodorum_ 58 57
Mycosphaerella_graminicola_IPO323_ 41 37
Zasmidium_cellare_ATCC_36951_v1.0 77 73
Dothistroma_septosporum 46 45
Septoria_musiva_v1.0 25 24
Mycosphaerella_fijiensis_CIRAD86_ 34 32
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 43 42
Paracoccidioides_brasiliensis_Pb18_ 14 13
Coccidioides_posadasii_RMSCC_3488_ 20 18
Coccidioides_immitis_RS_ 22 20
Ajellomyces_dermatitidis_SLH14081_ 19 17
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 17 15
Microsporum_canis_CBS_113480_ 18 16
Trichophyton_equinum_CBS_127.97_ 14 12
Trichophyton_verrucosum_HKI_0517_ 12 12
Arthroderma_benhamiae_CBS_112371_ 14 13
Trichophyton_tonsurans_CBS_112818_ 16 14
Trichophyton_rubrum_CBS_118892_ 15 13
Uncinocarpus_reesii_1704_ 20 19
Aspergillus_zonatus_v1.0 18 16
Penicillium_chrysogenum_Wisconsin_54-1255_ 18 16
Penicillium_chrysogenum_v1.0 24 22
Aspergillus_acidus_v1.0 20 18
Aspergillus_fumigatus_Af293 14 13
Aspergillus_brasiliensis_v1.0 20 18
Aspergillus_nidulans_FGSC_A4_ 15 15
Aspergillus_sydowii_v1.0 24 23
Aspergillus_versicolor_v1.0 22 21
Aspergillus_glaucus 22 20
Aspergillus_carbonarius_ITEM_5010_ 17 16
Neosartorya_fischeri_NRRL_181_ 16 14
Aspergillus_terreus_NIH2624_ 18 17
Aspergillus_tubingensis_v1.0 16 14
Aspergillus_wentii_v1.0 27 25
Aspergillus_oryzae_RIB40_ 15 13
Aspergillus_niger_22 16 14
Aspergillus_niger_ATCC_1015_ 10 9
Aspergillus_flavus_NRRL3357_ 17 16
Aspergillus_clavatus_NRRL_1_ 17 15
Penicillium_marneffei_ATCC_18224_ 22 21
Tuber_melanosporum_Mel28_22 17 14
Tuber_melanosporum_Vittad_   (Perigord truffle)   18 15
Hansenula_polymorpha_v2.0 9 7
Dekkera_bruxellensis_CBS_2499_v2.0 9 7
Pichia_membranifaciensv1.0 8 7
Candida_tanzawaensis_NRRL_Y-17324__v1.0 9 7
Candida_dubliniensis_CD36_ 9 7
Candida_tropicalis_MYA-3404_ 9 7
Candida_parapsilosis_ 9 7
Candida_albicans_SC5314 10 8
Lodderomyces_elongisporus_NRRL_YB-4239_ 9 7
Babjeviella_inositovora_NRRL_Y-12698_v1.0 8 6
Pichia_stipitis_CBS_6054_ 9 7
Candida_guilliermondii_ATCC_6260_ 8 6
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 10 8
Debaromyces_hansenii 9 7
Wickerhamomyces_anomalus 9 7
Pichia_pastoris_GS115_ 5 4
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3 2
Yarrowia_lipolytica_CLIB122 27 25
Candida_lusitaniae_ATCC_42720_ 8 6
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 5 4
Vanderwaltozyma_polyspora_DSM_70294_ 8 7
Candida_glabrata_CBS138 7 6
Kluyveromyces_thermotolerans_CBS_6340 7 6
Lachancea_kluyveri_ 8 6
Kluyveromyces_waltii 7 6
Ashbya_gossypii_ATCC_10895_ 6 5
Zygosaccharomyces_rouxii_ 6 5
Saccharomyces_mikatae_MIT 8 6
Saccharomyces_paradoxus_MIT 8 6
Saccharomyces_cerevisiae_76   (Baker's yeast)   9 6
Saccharomyces_bayanus_MIT 8 6
Kluyveromyces_lactis 8 6
Schizosaccharomyces_cryophilus_OY26_22 8 6
Schizosaccharomyces_octosporus_yFS286_ 8 6
Schizosaccharomyces_japonicus_yFS275_ 8 6
Schizosaccharomyces_pombe   (Fission yeast)   8 6
Catenaria_anguillulae_PL171_v1.0 30 30
Allomyces_macrogynus_ATCC_38327_ 30 29
Spizellomyces_punctatus_DAOM_BR117_ 17 15
Dictyostelium_discoideum 43 38
Dictyostelium_purpureum_ 37 34
Entamoeba_dispar_1.2 9 9
Entamoeba_invadens_1.2 8 8
Entamoeba_histolytica_1 10 10
Selaginella_moellendorffii_ 85 82
Pinus_taeda   (Loblolly pine)   124 114
Picea_abies   (Norway spruce)   68 66
Eucalyptus_grandis_v201   (Rose gum)   123 117
Theobroma_cacao_B97-61/B2_v1   (Cacao)   73 70
Gossypium_raimondii_v221 236 232
Citrus_clementina_v165 145 140
Citrus_sinensis_v154   (Sweet orange)   168 163
Thellungiella_halophila_v173 119 117
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   136 132
Capsella_rubella_v183 117 115
Arabidopsis_lyrata_   (Lyrate rockcress)   97 95
Arabidopsis_thaliana_10   (Thale cress)   136 128
Carica_papaya_   (Papaya)   66 64
Medicago_truncatula_   (Barrel medic)   191 183
Phaseolus_vulgaris_v186   (French bean)   116 111
Glycine_max_v109   (Soybean)   180 174
Cucumis_sativus_v122   (Cucumber)   81 78
Fragaria_vesca_   (Wild strawberry)   91 88
Malus_domestica_v196   (Apple)   174 169
Prunus_persica_v139   (Peach)   84 82
Linum_usitatissimum_v200   (Flax)   126 122
Manihot_esculenta_v147   (Cassava)   103 102
Populus_trichocarpa_v156   (Black cottonwood)   131 127
Vitis_vinifera_   (Wine grape)   66 65
Mimulus_guttatus_v140   (Spotted monkey flower)   85 83
Solanum_lycopersicum_v.2.3   (Tomato)   92 90
Solanum_tuberosum_   (Potato)   159 155
Actinidia_chinensis_Hongyang_ 96 94
Aquilegia_coerulea_v195 162 149
Triticum_urartu_22 196 174
Triticum_aestivum_22   (Bread wheat)   353 342
Aegilops_tauschii_22 369 351
Brachypodium_distachyon_   (Stiff brome)   139 136
Oryza_barthii_22   (African wild rice)   239 173
Oryza_meridionalis_22 208 150
Oryza_glumaepatula_22 236 188
Oryza_glaberrima   (African rice)   159 158
Oryza_punctata_22 191 157
Oryza_nivara_22 246 188
Oryza_brachyantha_22   (Malo sina)   112 108
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   235 229
Oryza_sativa_v193   (Rice)   235 229
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   115 109
Panicum_virgatum_v202   (Switchgrass)   413 404
Setaria_italica_v164   (Foxtail millet)   194 191
Zea_mays_subsp._mays_   (Maize)   161 158
Zea_mays_v181   (Maize)   178 175
Sorghum_bicolor_   (Sorghum)   187 179
Musa_balbisiana   (Balbis banana)   120 117
Musa_acuminata_22   (Wild Malaysian banana)   115 112
Amborella_trichopoda_22 57 54
Physcomitrella_patens 77 74
Coccomyxa_subellipsoidea_sp._C-169_v2 17 16
Asterochloris_sp._Cgr/DA1pho_v1.0 12 12
Chlorella_variabilis_sp._NC64A_ 9 9
Chlorella_vulgaris_ 19 17
Volvox_carteri_f._nagariensis_ 30 30
Volvox_carteri_v199 24 24
Chlamydomonas_reinhardtii_4.0 46 46
Ostreococcus_sp._RCC809_ 3 3
Ostreococcus_lucimarinus_CCE9901_ 4 4
Ostreococcus_tauri_ 5 5
Bathycoccus_prasinos_ 4 4
Micromonas_sp._RCC299_ 6 6
Micromonas_pusilla_CCMP1545_v3.0 8 8
Cyanidioschyzon_merolae_strain_10D_22 5 4
Cyanidioschyzon_merolae 5 4
Porphyridium_purpureum_02_2012 10 10
Thecamonas_trahens_ATCC_50062_ 28 26
Bigelowiella_natans_CCMP2755_22 26 26
Giardia_lamblia_2.3 1 1
Cyanophora_paradoxa_ 38 38
Leishmania_mexicana_2.4 11 10
Leishmania_major_strain_Friedlin_ 11 10
Leishmania_infantum_JPCM5_2.4 11 10
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 12 11
Trypanosoma_vivax_ 14 13
Trypanosoma_cruzi_strain_CL_Brener 13 12
Trypanosoma_congolense_2.4 18 17
Trypanosoma_brucei_gambiense_v4.1 15 14
Trypanosoma_brucei_TREU927_v4.1 14 13
Ectocarpus_siliculosus 30 28
Aureococcus_anophagefferens_ 14 14
Albugo_laibachii_22 31 29
Pythium_iwayamai_DAOM_BR242034_22 18 17
Pythium_arrhenomanes_ATCC_12531_22 16 15
Pythium_ultimum_v1.7-2 20 18
Pythium_aphanidermatum_DAOM_BR444_22 16 16
Pythium_irregulare_DAOM_BR486_22 21 19
Pythium_vexans_DAOM_BR484_22 21 19
Phytophthora_ramorum_1.1   (Sudden oak death agent)   21 20
Phytophthora_sojae_1.1 19 18
Phytophthora_infestans_T30-4_ 22 20
Phytophthora_capsici_ 19 18
Hyaloperonospora_arabidopsidis_22 14 13
Phaeodactylum_tricornutumCCAP_1055/1 16 15
Fragilariopsis_cylindrus 78 78
Thalassiosira_pseudonana_CCMP1335 23 23
Perkinsus_marinus_ATCC_50983_ 29 29
Paramecium_tetraurelia_ 27 27
Tetrahymena_thermophila_SB210_1_ 13 12
Ichthyophthirius_multifiliis_strain_G5_ 4 4
Cryptosporidium_hominis 5 5
Cryptosporidium_muris 7 7
Cryptosporidium_parvum_Iowa_II 5 5
Neospora_caninum 13 13
Toxoplasma_gondii_VEG 14 13
Toxoplasma_gondii_ME49 15 14
Toxoplasma_gondii_GT1 15 14
Babesia_bovis_T2Bo_ 8 8
Theileria_parva__ 4 4
Theileria_annulata 4 4
Plasmodium_falciparum_3D7_ 3 3
Plasmodium_vivax_SaI-1_7.0 4 4
Plasmodium_knowlesi_strain_H_ 4 4
Plasmodium_yoelii_ssp._yoelii_1_ 3 3
Plasmodium_chabaudi_ 4 4
Plasmodium_berghei_ANKA_ 4 4
Symbiodinium_minutum_clade_B1_v1.2 149 124
Naegleria_gruberi_ 173 152
Trichomonas_vaginalis_ 48 48
Guillardia_theta_CCMP2712_v1.0_ 31 29
Emiliania_huxleyi_CCMP1516_ 227 210
Candidatus_Protochlamydia_amoebophila_UWE25 42 42
Parachlamydia_acanthamoebae_UV-7 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   295 285
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   257 250
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   130 126
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   65 62
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   222 216
Cryptococcus_neoformans_var._grubii_H99_ 11 10
Cryptococcus_neoformans_B-3501A_ 9 8
Cryptococcus_neoformans_JEC21_ 5 5
Paracoccidioides_brasiliensis_Pb01_ 15 14
Paracoccidioides_brasiliensis_Pb03_ 16 15
Coccidioides_posadasii_str._Silveira_ 18 17
Coccidioides_immitis_RMSCC_3703_ 18 18
Coccidioides_immitis_RMSCC_2394_ 18 16
Coccidioides_immitis_H538.4_ 14 13
Ajellomyces_dermatitidis_ER-3_ 18 16
Histoplasma_capsulatum_H143 18 16
Histoplasma_capsulatum_H88 20 18
Histoplasma_capsulatum_G186AR 21 19
Aspergillus_fumigatus_A1163_ 18 17
Candida_albicans_WO-1_ 9 7
Saccharomyces_cerevisiae_UC5 9 6
Saccharomyces_cerevisiae_PW5 8 6
Saccharomyces_cerevisiae_FL100 6 4
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 7 4
Saccharomyces_cerevisiae_CBS7960 8 5
Saccharomyces_cerevisiae_YJM269 7 4
Saccharomyces_cerevisiae_T7 9 6
Saccharomyces_cerevisiae_FostersB 6 5
Saccharomyces_cerevisiae_FostersO 7 5
Saccharomyces_cerevisiae_VL3 8 6
Saccharomyces_cerevisiae_Vin13 8 6
Saccharomyces_cerevisiae_LalvinQA23 7 5
Saccharomyces_cerevisiae_AWRI796 4 4
Saccharomyces_cerevisiae_Sigma1278b 9 6
Saccharomyces_cerevisiae_W303 9 6
Saccharomyces_cerevisiae_JAY291 9 6
Saccharomyces_cerevisiae_AWRI1631 7 5
Saccharomyces_cerevisiae_YPS163 5 3
Saccharomyces_cerevisiae_M22 5 3
Saccharomyces_cerevisiae_T73 6 4
Saccharomyces_cerevisiae_CLIB215 8 6
Saccharomyces_cerevisiae_Y10 5 4
Saccharomyces_cerevisiae_YJM789_ 9 6
Saccharomyces_cerevisiae_YJM789 9 6
Saccharomyces_cerevisiae_RM11-1a 9 6
Saccharomyces_cerevisiae_RM11-1a_ 9 6
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   9 6
Schizosaccharomyces_pombe_972h-_ 8 6
Batrachochytrium_dendrobatidis_JEL423_ 11 10
Batrachochytrium_dendrobatidis_JAM81_ 13 12
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   72 69
Hordeum_vulgare_22   (Domesticated barley)   204 187
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   235 227
Trypanosoma_brucei_Lister_427_v4.1 13 12
Neospora_caninum_Nc-Liverpool_6.2 13 13
Plasmodium_falciparum_HB3_ 2 2
Plasmodium_falciparum_Dd2_ 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   208 198
Pan_troglodytes_69_2.1.4   (Chimpanzee)   185 176
Gorilla_gorilla_69_3.1   (Western gorilla)   189 181
Pongo_abelii_69_2   (Sumatran orangutan)   189 179
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   171 161
Macaca_mulatta_69_1   (Rhesus monkey)   186 176
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   187 178
Otolemur_garnettii_69_3   (Small-eared galago)   198 188
Microcebus_murinus_69_1   (Gray mouse lemur)   131 125
Rattus_norvegicus_69_3.4   (Norway rat)   195 186
Mus_musculus_69_38   (House mouse)   245 234
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   144 137
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   181 174
Cavia_porcellus_69_3   (Domestic guinea pig)   199 190
Oryctolagus_cuniculus_69_2   (Rabbit)   181 171
Ochotona_princeps_69   (American pika)   143 134
Tupaia_belangeri_69   (Northern tree shrew)   108 102
Sus_scrofa_69_10.2   (Pig)   185 176
Bos_taurus_69_3.1   (Cattle)   195 183
Vicugna_pacos_69_1   (Alpaca)   93 88
Tursiops_truncatus_69_1   (Bottlenose dolphin)   166 157
Mustela_putorius_furo_69_1.0   (Domestic ferret)   189 180
Ailuropoda_melanoleuca_69_1   (Giant panda)   181 172
Canis_familiaris_69_3.1   (Dog)   185 176
Felis_catus_69   (Domestic cat)   113 107
Equus_caballus_69_2   (Horse)   173 163
Myotis_lucifugus_69_2.0   (Little brown bat)   199 190
Pteropus_vampyrus_69_1   (Large flying fox)   162 154
Sorex_araneus_69_1   (European shrew)   104 99
Erinaceus_europaeus_69   (Western European hedgehog)   118 113
Procavia_capensis_69_1   (Cape rock hyrax)   137 132
Loxodonta_africana_69_3   (African savanna elephant)   182 172
Echinops_telfairi_69   (Small Madagascar hedgehog)   135 128
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   116 109
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   95 91
Macropus_eugenii_69_1.0   (Tammar wallaby)   140 132
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   167 160
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   195 184
Ornithorhynchus_anatinus_69_5   (Platypus)   141 136
Petromyzon_marinus_69_7.0   (Sea lamprey)   81 77
Meleagris_gallopavo_69_2   (Turkey)   151 143
Gallus_gallus_69_2   (Chicken)   166 157
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   158 152
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   175 165
Anolis_carolinensis_69_2.0   (Green anole)   175 166
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   176 169
Latimeria_chalumnae_69_1   (Coelacanth)   202 193
Gadus_morhua_69_1   (Atlantic cod)   197 190
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   205 197
Takifugu_rubripes_69_4   (Torafugu)   216 208
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   207 200
Oryzias_latipes_69_1   (Japanese medaka)   191 184
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   228 220
Oreochromis_niloticus_69_1.0   (Nile tilapia)   235 227
Danio_rerio_69_9   (Zebrafish)   241 229
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   65 63
Ciona_intestinalis_69   (Vase tunicate)   103 100
Drosophila_melanogaster_69_5   (Fruit fly)   89 85
Caenorhabditis_elegans_69_215   (Roundworm)   182 177
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   9 6
Arabidopsis_thaliana_10   (Thale cress)   105 101

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   632 610
Homo_sapiens__(NCBI_version)   (Human)   288 273
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   232 222
Heliconius_numata__(Incomplete) 20 20
Loa_loa_v3.3_(Request)   (Eye worm)   65 62
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   50 48
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   53 50
Moniliophthora_perniciosa_FA553__(Genome_survey) 6 6
Encephalitozoon_intestinalis__(endoparasite) 1 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   9 9
Lotus_japonicus__(Early_assembly) 84 81
Malus_x_domestica_(Duplicate)   (Apple)   174 169
Ricinus_communis__(Early_assembly)   (Castor bean)   71 68
Nicotiana_benthamiana_0.4.4_(Early_draft) 175 165
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   91 89
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   92 90
Phoenix_dactylifera__(Early_draft)   (Date palm)   53 51
Protein_Data_Bank_(all_PDB_sequenc) 555 549
PDB_chains_(SCOP_1.75)_(PDB) 24 24
NCBI_viral_sequences_(Viral) 178 173
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1076 1076
UniProt__viral_sequences_(Viral) 170 169
Protozoadb_2010_08_(Protozoadb) 329 320
STRING_v9.0.5_(STRING) 10662 10094
Uniprot_2018_03_genome 105779 100007
NCBI_2017_08_genome 136594 129679
TargetDB__(Targets) 391 374

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]