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Domain combinations for Protease propeptides/inhibitors superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Protease propeptides/inhibitors domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   57 57
Pan_troglodytes_76_2.1.4   (Chimpanzee)   18 18
Gorilla_gorilla_76_3.1   (Western gorilla)   17 17
Pongo_abelii_76_2   (Sumatran orangutan)   15 15
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   15 15
Papio_anubis_76   (Olive baboon)   16 16
Macaca_mulatta_76_1   (Rhesus monkey)   21 21
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   30 30
Otolemur_garnettii_76_3   (Small-eared galago)   13 13
Microcebus_murinus_76_1   (Gray mouse lemur)   14 14
Rattus_norvegicus_76_5.0   (Norway rat)   16 16
Mus_musculus_76_38   (House mouse)   28 28
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   13 13
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   16 16
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   12 12
Cavia_porcellus_76_3   (Domestic guinea pig)   15 15
Oryctolagus_cuniculus_76_2   (Rabbit)   15 15
Ochotona_princeps_76   (American pika)   13 13
Tupaia_belangeri_76   (Northern tree shrew)   9 9
Sus_scrofa_76_10.2   (Pig)   19 19
Bos_taurus_76_3.1   (Cattle)   14 14
Ovis_aries_76_3.1   (Sheep)   17 17
Vicugna_pacos_76_1   (Alpaca)   11 11
Tursiops_truncatus_76_1   (Bottlenose dolphin)   15 15
Mustela_putorius_furo_76_1.0   (Domestic ferret)   15 15
Ailuropoda_melanoleuca_76_1   (Giant panda)   15 15
Canis_familiaris_76_3.1   (Dog)   18 18
Felis_catus_76_6.2   (Domestic cat)   13 13
Equus_caballus_76_2   (Horse)   15 14
Myotis_lucifugus_76_2.0   (Little brown bat)   12 12
Pteropus_vampyrus_76_1   (Large flying fox)   14 14
Sorex_araneus_76_1   (European shrew)   8 8
Erinaceus_europaeus_76   (Western European hedgehog)   11 11
Procavia_capensis_76_1   (Cape rock hyrax)   12 12
Loxodonta_africana_76_3   (African savanna elephant)   17 17
Echinops_telfairi_76   (Small Madagascar hedgehog)   12 12
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   14 14
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   10 10
Macropus_eugenii_76_1.0   (Tammar wallaby)   13 13
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   17 17
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   15 15
Ornithorhynchus_anatinus_76_5   (Platypus)   10 10
Saccoglossus_kowalevskii_v3.0 79 78
Petromyzon_marinus_76_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_76_2   (Turkey)   12 12
Gallus_gallus_76_4   (Chicken)   16 16
Anas_platyrhynchos_76_1.0   (Mallard)   13 13
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   12 12
Ficedula_albicollis_76_1.0   (Collared flycatcher)   14 14
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   17 17
Anolis_carolinensis_76_2.0   (Green anole)   15 15
Xenopus_laevis_   (African clawed frog)   57 57
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   20 20
Latimeria_chalumnae_76_1   (Coelacanth)   12 11
Lepisosteus_oculatus_76   (Spotted gar)   16 16
Gadus_morhua_76_1   (Atlantic cod)   13 13
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   19 19
Takifugu_rubripes_76_4   (Torafugu)   38 38
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   17 17
Oryzias_latipes_76_1   (Japanese medaka)   22 22
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   16 16
Poecilia_formosa_76   (Amazon molly)   14 14
Oreochromis_niloticus_76_1.0   (Nile tilapia)   14 14
Astyanax_mexicanus_76   (Mexican tetra)   14 14
Danio_rerio_76_9   (Zebrafish)   24 24
Oikopleura_dioica 11 11
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   15 14
Ciona_intestinalis_76   (Vase tunicate)   14 14
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   74 74
Adineta_vaga 22 22
Octopus_bimaculoides_280 8 8
Crassostrea_gigas_22   (Pacific oyster)   7 7
Lottia_gigantea_   (Owl limpet)   6 6
Helobdella_robusta_ 13 13
Capitella_sp._I_ 20 20
Danaus_plexippus_OGS1.0   (Monarch butterfly)   20 20
Heliconius_melpomene_   (Postman butterfly)   19 10
Bombyx_mori_   (Domestic silkworm)   11 10
Nasonia_vitripennis_   (Jewel wasp)   12 12
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   23 23
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   7 7
Linepithema_humile_v1.1   (Argentine ant)   12 10
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   12 12
Solenopsis_invicta_v.2.2.3   (Red fire ant)   8 8
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   14 12
Atta_cephalotes_v1.1 10 10
Camponotus_floridanus_v3.3   (Florida carpenter ant)   5 5
Lucilia_cuprina   (Australian sheep blowfly)   21 14
Drosophila_grimshawi_1.3 21 21
Drosophila_willistoni_1.3 23 23
Drosophila_pseudoobscura_2.13 22 22
Drosophila_persimilis_1.3 20 20
Drosophila_suzukii 22 17
Drosophila_yakuba_1.3 21 21
Drosophila_simulans_1.3 17 17
Drosophila_sechellia_1.3 18 18
Drosophila_melanogaster_76_5   (Fruit fly)   38 38
Drosophila_erecta_1.3 21 21
Drosophila_ananassae_1.3 20 20
Drosophila_virilis_1.2 22 22
Drosophila_mojavensis_1.3 23 23
Megaselia_scalaris_22 8 8
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   22 22
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   23 23
Anopheles_darlingi_22   (American malaria mosquito)   12 12
Anopheles_gambiae_49_3j   (African malaria mosquito)   18 18
Tribolium_castaneum_3.0   (Red flour beetle)   13 13
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   6 6
Acyrthosiphon_pisum_   (Pea aphid)   5 5
Rhodnius_prolixus_22 4 4
Daphnia_pulex_   (Common water flea)   27 26
Strigamia_maritima_22 11 11
Sarcoptes_scabiei 4 4
Tetranychus_urticae_   (Two-spotted spider mite)   8 8
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3 3
Pristionchus_pacificus_ 8 8
Meloidogyne_incognita_   (Southern root-knot nematode)   15 15
Meloidogyne_hapla_ 4 4
Onchocerca_volvulus_22 10 10
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   11 11
Caenorhabditis_japonica_ 11 11
Caenorhabditis_brenneri_ 13 12
Caenorhabditis_remanei_ 11 11
Caenorhabditis_elegans_76_235   (Roundworm)   33 33
Caenorhabditis_briggsae_2 9 9
Trichinella_spiralis_22 5 5
Hymenolepis_microstoma_ 2 2
Echinococcus_multilocularis_ 3 3
Echinococcus_granulosus_ 2 2
Taenia_solium_   (Pork tapeworm)   1 1
Schistosoma_mansoni_ 2 2
Mnemiopsis_leidyi   (Sea walnut)   9 8
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 11 11
Nematostella_vectensis_1.0   (Starlet sea anemone)   15 14
Hydra_vulgaris 13 13
Amphimedon_queenslandica 17 16
Trichoplax_adhaerens_ 2 2
Proterospongia_sp._ATCC_50818_ 3 3
Monosiga_brevicollis_ 3 3
Capsaspora_owczarzaki_ATCC_30864_ 8 8
Conidiobolus_coronatus_NRRL28638_v1.0 17 17
Mortierella_verticillata_NRRL_6337_ 20 20
Phycomyces_blakesleeanus_ 3 3
Rhizopus_oryzae_RA_99-880_ 5 5
Mucor_circinelloides_ 1 1
Rhizomucor_miehei_CAU432_ 4 4
Malassezia_globosa_CBS_7966_ 4 4
Sporisorium_reilianum_22 3 3
Ustilago_maydis_ 3 3
Mixia_osmundae_IAM_14324_v1.0 9 9
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6 6
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 9 9
Melampsora_laricis-populina_ 5 5
Rhodotorula_graminis_WP1_v1.0 2 2
Sporobolomyces_roseus_IAM_13481_ 3 3
Microbotryum_violaceum_22 2 2
Wallemia_sebi_v1.0 4 4
Sphaerobolus_stellatus_v1.0 25 23
Piloderma_croceum_F_1598_v1.0 9 9
Serpula_lacrymans_var._lacrymans_S7.9_ 11 11
Coniophora_puteana 21 20
Hydnomerulius_pinastri_v2.0 10 10
Paxillus_rubicundulus_Ve08.2h10_v1.0 6 6
Pisolithus_microcarpus_441_v1.0 4 4
Pisolithus_tinctorius_Marx_270_v1.0 4 4
Scleroderma_citrinum_Foug_A_v1.0 6 6
Coprinopsis_cinerea_okayama7_130_v3 8 8
Pleurotus_ostreatus_   (Oyster mushroom)   12 12
Amanita_thiersii_Skay4041_v1.0 13 13
Amanita_muscaria_Koide_v1.0   (Fly agaric)   8 8
Galerina_marginata_v1.0 22 22
Hebeloma_cylindrosporum_h7_v2.0 12 12
Laccaria_bicolor_S238N-H82_ 12 12
Agaricus_bisporus_var._bisporus_ 7 7
Schizophyllum_commune_ 9 9
Stereum_hirsutum_FP-91666_SS1__v1.0 22 21
Heterobasidion_annosum_ 18 18
Gloeophyllum_trabeumv1.0 12 12
Punctularia_strigosozonata_v1.0 13 13
Sebacina_vermifera_MAFF_305830_v1.0 12 12
Fomitiporia_mediterranea_v1.0 9 9
Tulasnella_calospora_AL13/4D_v1.0 7 7
Postia_placenta_ 36 36
Wolfiporia_cocos_MD-104_SS10__v1.0 20 20
Fomitopsis_pinicolav1.0 31 31
Fomitopsis_pinicola_FP-58527_SS1_v3.0 30 30
Phanerochaete_chrysosporium_RP-78_2.1 10 10
Dichomitus_squalens 29 29
Trametes_versicolor_v1.0 31 31
Tremella_mesenterica_   (Witches' butter)   2 2
Daldinia_eschscholzii_EC12_v1.0 17 17
Apiospora_montagnei_NRRL_25634_v1.0 19 19
Magnaporthe_poae_ATCC_64411_22 7 7
Magnaporthe_grisea_70-15_ 14 14
Podospora_anserina_ 11 11
Sporotrichum_thermophile_ATCC_42464_ 8 8
Thielavia_terrestris_NRRL_8126_ 10 10
Chaetomium_globosum_CBS_148.51_ 15 15
Neurospora_tetrasperma_ 9 9
Neurospora_discreta_FGSC_8579_ 8 8
Neurospora_crassa_OR74A_ 11 11
Cryphonectria_parasitica_   (Chestnut blight fungus)   16 16
Verticillium_albo-atrum_VaMs.102_ 10 10
Verticillium_dahliae_VdLs.17_ 11 11
Acremonium_alcalophilumv_1.0 8 8
Glomerella_graminicola_22 17 17
Fusarium_graminearum_ 19 19
Nectria_haematococca_mpVI_ 15 15
Fusarium_oxysporum_f._sp._lycopersici_4286_ 20 20
Fusarium_verticillioides_7600_ 18 18
Trichoderma_asperellum_CBS_433.97_v1.0 19 19
Trichoderma_atroviride_ 22 22
Trichoderma_citrinoviride_v1.0 14 14
Trichoderma_reesei_1.2 12 12
Trichoderma_virens_Gv29-8_ 16 16
Trichoderma_longibrachiatum_ATCC_18648_v1.0 10 10
Trichoderma_harzianum_CBS_226.95_v1.0 20 20
Amorphotheca_resinae_v1.0   (Creosote fungus)   14 14
Botrytis_cinerea_B05.10_ 14 14
Sclerotinia_sclerotiorum_ 12 12
Blumeria_graminis_22 3 3
Didymella_exigua_CBS_183.55_v1.0 11 11
Leptosphaeria_maculans_22 12 12
Setosphaeria_turcica_v1.0 15 15
Cochliobolus_miyabeanus_ATCC_44560_v1.0 12 12
Cochliobolus_victoriae_FI3_v1.0 14 14
Cochliobolus_carbonum_26-R-13_v1.0 13 13
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   8 8
Alternaria_brassicicola_ 15 15
Cochliobolus_lunatus_m118_v2.0 12 12
Pyrenophora_teres_f._teres_22 14 14
Pyrenophora_tritici-repentis_ 13 13
Stagonospora_nodorum_ 16 16
Mycosphaerella_graminicola_IPO323_ 14 14
Zasmidium_cellare_ATCC_36951_v1.0 31 31
Dothistroma_septosporum 12 12
Septoria_musiva_v1.0 12 12
Mycosphaerella_fijiensis_CIRAD86_ 10 10
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 8 8
Paracoccidioides_brasiliensis_Pb18_ 7 7
Coccidioides_posadasii_RMSCC_3488_ 17 17
Coccidioides_immitis_RS_ 17 17
Ajellomyces_dermatitidis_SLH14081_ 7 7
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 5 5
Microsporum_canis_CBS_113480_ 15 15
Trichophyton_equinum_CBS_127.97_ 15 15
Trichophyton_verrucosum_HKI_0517_ 17 17
Arthroderma_benhamiae_CBS_112371_ 16 16
Trichophyton_tonsurans_CBS_112818_ 18 18
Trichophyton_rubrum_CBS_118892_ 17 17
Uncinocarpus_reesii_1704_ 17 17
Aspergillus_zonatus_v1.0 9 9
Penicillium_chrysogenum_Wisconsin_54-1255_ 8 8
Penicillium_chrysogenum_v1.0 9 9
Aspergillus_acidus_v1.0 12 12
Aspergillus_fumigatus_Af293 11 11
Aspergillus_brasiliensis_v1.0 10 10
Aspergillus_nidulans_FGSC_A4_ 8 8
Aspergillus_sydowii_v1.0 7 7
Aspergillus_versicolor_v1.0 7 7
Aspergillus_glaucus 6 6
Aspergillus_carbonarius_ITEM_5010_ 8 8
Neosartorya_fischeri_NRRL_181_ 8 8
Aspergillus_terreus_NIH2624_ 6 6
Aspergillus_tubingensis_v1.0 11 11
Aspergillus_wentii_v1.0 8 8
Aspergillus_oryzae_RIB40_ 8 8
Aspergillus_niger_22 11 11
Aspergillus_niger_ATCC_1015_ 5 5
Aspergillus_flavus_NRRL3357_ 9 9
Aspergillus_clavatus_NRRL_1_ 7 7
Penicillium_marneffei_ATCC_18224_ 11 11
Tuber_melanosporum_Mel28_22 3 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   3 3
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Pichia_membranifaciensv1.0 3 3
Candida_tanzawaensis_NRRL_Y-17324__v1.0 4 4
Candida_dubliniensis_CD36_ 3 3
Candida_tropicalis_MYA-3404_ 5 5
Candida_parapsilosis_ 3 3
Candida_albicans_SC5314 4 4
Lodderomyces_elongisporus_NRRL_YB-4239_ 3 3
Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 3
Pichia_stipitis_CBS_6054_ 4 4
Candida_guilliermondii_ATCC_6260_ 3 3
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 5 5
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 3 3
Pichia_pastoris_GS115_ 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 9 9
Candida_lusitaniae_ATCC_42720_ 3 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 3
Vanderwaltozyma_polyspora_DSM_70294_ 2 2
Candida_glabrata_CBS138 5 5
Kluyveromyces_thermotolerans_CBS_6340 3 3
Lachancea_kluyveri_ 4 4
Kluyveromyces_waltii 3 3
Ashbya_gossypii_ATCC_10895_ 3 3
Zygosaccharomyces_rouxii_ 3 3
Saccharomyces_mikatae_MIT 5 5
Saccharomyces_paradoxus_MIT 6 6
Saccharomyces_cerevisiae_76   (Baker's yeast)   5 5
Saccharomyces_bayanus_MIT 5 5
Kluyveromyces_lactis 3 3
Schizosaccharomyces_cryophilus_OY26_22 4 4
Schizosaccharomyces_octosporus_yFS286_ 3 3
Schizosaccharomyces_japonicus_yFS275_ 3 3
Schizosaccharomyces_pombe   (Fission yeast)   2 2
Catenaria_anguillulae_PL171_v1.0 26 26
Allomyces_macrogynus_ATCC_38327_ 18 18
Spizellomyces_punctatus_DAOM_BR117_ 10 10
Dictyostelium_discoideum 8 8
Dictyostelium_purpureum_ 8 8
Selaginella_moellendorffii_ 6 6
Pinus_taeda   (Loblolly pine)   8 8
Picea_abies   (Norway spruce)   4 4
Eucalyptus_grandis_v201   (Rose gum)   11 11
Theobroma_cacao_B97-61/B2_v1   (Cacao)   4 4
Gossypium_raimondii_v221 16 16
Citrus_clementina_v165 11 11
Citrus_sinensis_v154   (Sweet orange)   9 9
Thellungiella_halophila_v173 7 7
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8 8
Capsella_rubella_v183 8 8
Arabidopsis_lyrata_   (Lyrate rockcress)   7 7
Arabidopsis_thaliana_10   (Thale cress)   5 5
Carica_papaya_   (Papaya)   4 4
Medicago_truncatula_   (Barrel medic)   13 13
Phaseolus_vulgaris_v186   (French bean)   8 8
Glycine_max_v109   (Soybean)   17 17
Cucumis_sativus_v122   (Cucumber)   9 9
Fragaria_vesca_   (Wild strawberry)   6 6
Malus_domestica_v196   (Apple)   10 10
Prunus_persica_v139   (Peach)   6 6
Linum_usitatissimum_v200   (Flax)   9 9
Manihot_esculenta_v147   (Cassava)   11 11
Populus_trichocarpa_v156   (Black cottonwood)   11 11
Vitis_vinifera_   (Wine grape)   3 3
Mimulus_guttatus_v140   (Spotted monkey flower)   7 7
Solanum_lycopersicum_v.2.3   (Tomato)   7 7
Solanum_tuberosum_   (Potato)   7 7
Actinidia_chinensis_Hongyang_ 4 4
Aquilegia_coerulea_v195 9 9
Triticum_urartu_22 5 5
Triticum_aestivum_22   (Bread wheat)   7 7
Aegilops_tauschii_22 4 4
Brachypodium_distachyon_   (Stiff brome)   7 7
Oryza_barthii_22   (African wild rice)   3 3
Oryza_meridionalis_22 5 5
Oryza_glumaepatula_22 4 4
Oryza_glaberrima   (African rice)   5 5
Oryza_punctata_22 5 5
Oryza_nivara_22 7 7
Oryza_brachyantha_22   (Malo sina)   6 6
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   5 5
Oryza_sativa_v193   (Rice)   5 5
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2 2
Panicum_virgatum_v202   (Switchgrass)   7 7
Setaria_italica_v164   (Foxtail millet)   3 3
Zea_mays_subsp._mays_   (Maize)   5 5
Zea_mays_v181   (Maize)   5 5
Sorghum_bicolor_   (Sorghum)   4 4
Musa_balbisiana   (Balbis banana)   4 4
Musa_acuminata_22   (Wild Malaysian banana)   5 5
Amborella_trichopoda_22 3 3
Physcomitrella_patens 2 2
Micromonas_sp._RCC299_ 1 1
Thecamonas_trahens_ATCC_50062_ 7 7
Bigelowiella_natans_CCMP2755_22 5 5
Cyanophora_paradoxa_ 10 10
Aureococcus_anophagefferens_ 4 4
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 3 3
Pythium_arrhenomanes_ATCC_12531_22 2 2
Pythium_ultimum_v1.7-2 2 2
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2 2
Phytophthora_sojae_1.1 2 2
Phytophthora_infestans_T30-4_ 2 2
Phytophthora_capsici_ 2 2
Hyaloperonospora_arabidopsidis_22 2 2
Phaeodactylum_tricornutumCCAP_1055/1 11 11
Fragilariopsis_cylindrus 1 1
Symbiodinium_minutum_clade_B1_v1.2 1 1
Naegleria_gruberi_ 4 4
Emiliania_huxleyi_CCMP1516_ 2 2
Gloeobacter_violaceus_PCC_7421 1 1
Acidimicrobium_ferrooxidans_DSM_10331 3 3
Acidothermus_cellulolyticus_11B 2 2
Catenulispora_acidiphila_DSM_44928 11 11
Stackebrandtia_nassauensis_DSM_44728 7 7
Frankia_sp._EAN1pec 1 1
Frankia_alni_ACN14a 3 3
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1 1
Thermomonospora_curvata_DSM_43183 2 2
Streptosporangium_roseum_DSM_43021 1 1
Kitasatospora_setae_KM-6054 3 3
Streptomyces_coelicolor_A3(2) 1 1
Streptomyces_sp._PAMC26508 3 3
Streptomyces_flavogriseus_ATCC_33331 3 3
Streptomyces_sp._SirexAA-E 3 3
Streptomyces_griseus_subsp._griseus_NBRC_13350 5 5
Streptomyces_bingchenggensis_BCW-1 3 3
Streptomyces_violaceusniger_Tu_4113 3 3
Streptomyces_avermitilis_MA-4680 3 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2
Streptomyces_scabiei_87.22 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2
Actinosynnema_mirum_DSM_43827 8 8
Saccharomonospora_viridis_DSM_43017 2 2
Saccharopolyspora_erythraea_NRRL_2338 4 4
Amycolatopsis_mediterranei_U32 4 4
Kribbella_flavida_DSM_17836 2 2
Microlunatus_phosphovorus_NM-1 1 1
Salinispora_arenicola_CNS-205 3 3
Salinispora_tropica_CNB-440 1 1
Verrucosispora_maris_AB-18-032 8 8
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 2 2
Actinoplanes_sp._N902-109 3 3
Actinoplanes_sp._SE50/110 4 4
Actinoplanes_missouriensis_431 4 4
Segniliparus_rotundus_DSM_44985 2 2
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_vanbaalenii_PYR-1 1 1
Mycobacterium_rhodesiae_NBB3 2 2
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Kytococcus_sedentarius_DSM_20547 1 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 2 2
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 4 4
Intrasporangium_calvum_DSM_43043 2 2
Kocuria_rhizophila_DC2201 1 1
Arthrobacter_sp._FB24 1 1
Renibacterium_salmoninarum_ATCC_33209 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1
Truepera_radiovictrix_DSM_17093 1 1
Deinococcus_gobiensis_I-0 3 3
Deinococcus_deserti_VCD115 5 5
Deinococcus_maricopensis_DSM_21211 5 5
Deinococcus_geothermalis_DSM_11300 1 1
Deinococcus_proteolyticus_MRP 2 2
Deinococcus_radiodurans_R1 2 2
Oceanithermus_profundus_DSM_14977 1 1
Marinithermus_hydrothermalis_DSM_14884 1 1
Meiothermus_silvanus_DSM_9946 2 2
Meiothermus_ruber_DSM_1279 1 1
Thermus_sp._CCB_US3_UF1 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Symbiobacterium_thermophilum_IAM_14863 1 1
Sulfobacillus_acidophilus_DSM_10332 3 3
Thermincola_potens_JR 2 2
Clostridium_kluyveri_DSM_555 1 1
Clostridium_beijerinckii_NCIMB_8052 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 1 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1
Coprothermobacter_proteolyticus_DSM_5265 1 1
Moorella_thermoacetica_ATCC_39073 1 1
Lactobacillus_buchneri_NRRL_B-30929 7 7
Lactobacillus_buchneri 8 8
Lactobacillus_brevis_ATCC_367 1 1
Exiguobacterium_sp._AT1b 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 3 3
Geobacillus_sp._WCH70 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_sp._JS 2 2
Bacillus_sp._1NLA3E 1 1
Bacillus_amyloliquefaciens_FZB42 2 2
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 2 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_halodurans_C-125 2 2
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Bacillus_pseudofirmus_OF4 2 2
Bacillus_clausii_KSM-K16 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_pumilus_SAFR-032 2 2
Haliscomenobacter_hydrossis_DSM_1100 1 1
Niastella_koreensis_GR20-10 1 1
Flexibacter_litoralis_DSM_6794 1 1
Belliella_baltica_DSM_15883 1 1
Marivirga_tractuosa_DSM_4126 1 1
Spirosoma_linguale_DSM_74 2 2
Runella_slithyformis_DSM_19594 1 1
Prevotella_intermedia_17 1 1
Croceibacter_atlanticus_HTCC2559 1 1
Waddlia_chondrophila_WSU_86-1044 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Candidatus_Solibacter_usitatus_Ellin6076 4 4
Granulicella_tundricola_MP5ACTX9 10 10
Granulicella_mallensis_MP5ACTX8 11 11
Candidatus_Koribacter_versatilis_Ellin345 6 6
Terriglobus_saanensis_SP1PR4 5 5
Terriglobus_roseus_DSM_18391 3 3
Acidobacterium_capsulatum_ATCC_51196 6 6
Bacteriovorax_marinus_SJ 1 1
Geobacter_sp._M21 1 1
Geobacter_bemidjiensis_Bem 1 1
Geobacter_sulfurreducens_KN400 1 1
Geobacter_metallireducens_GS-15 1 1
Haliangium_ochraceum_DSM_14365 9 9
Sorangium_cellulosum_'So_ce_56' 3 3
Stigmatella_aurantiaca_DW4/3-1 12 12
Corallococcus_coralloides_DSM_2259 5 5
Myxococcus_xanthus_DK_1622 3 3
Myxococcus_fulvus_HW-1 1 1
Chromobacterium_violaceum_ATCC_12472 3 3
Rubrivivax_gelatinosus_IL144 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_phymatum_STM815 2 2
Burkholderia_xenovorans_LB400 1 1
Ralstonia_eutropha_JMP134 1 1
Burkholderia_sp._RPE64 1 1
Burkholderia_sp._CCGE1002 1 1
Burkholderia_thailandensis_E264 5 5
Burkholderia_pseudomallei_1106a 4 4
Burkholderia_mallei_SAVP1 2 2
Burkholderia_ambifaria_AMMD 4 4
Burkholderia_cenocepacia_HI2424 3 3
Burkholderia_multivorans_ATCC_17616 2 2
Burkholderia_vietnamiensis_G4 2 2
Burkholderia_gladioli_BSR3 3 3
Burkholderia_glumae_BGR1 3 3
Polaromonas_sp._JS666 1 1
Collimonas_fungivorans_Ter331 2 2
Azorhizobium_caulinodans_ORS_571 1 1
Methylocella_silvestris_BL2 1 1
Teredinibacter_turnerae_T7901 3 3
Cellvibrio_japonicus_Ueda107 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_harveyi_ATCC_BAA-1116 2 2
Vibrio_splendidus_LGP32 1 1
Vibrio_furnissii_NCTC_11218 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Vibrio_cholerae_O395 1 1
Photobacterium_profundum_SS9 1 1
Ferrimonas_balearica_DSM_9799 1 1
Shewanella_piezotolerans_WP3 1 1
Shewanella_loihica_PV-4 1 1
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_denitrificans_OS217 2 2
Shewanella_oneidensis_MR-1 1 1
Shewanella_baltica_OS185 2 2
Shewanella_woodyi_ATCC_51908 3 3
Shewanella_sp._MR-4 1 1
Shewanella_amazonensis_SB2B 3 3
Shewanella_violacea_DSS12 2 2
Shewanella_frigidimarina_NCIMB_400 1 1
Shewanella_putrefaciens_CN-32 1 1
Colwellia_psychrerythraea_34H 1 1
Glaciecola_sp._4H-3-7+YE-5 1 1
Alteromonas_sp._SN2 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 1 1
Kangiella_koreensis_DSM_16069 3 3
Marinomonas_mediterranea_MMB-1 1 1
Methylococcus_capsulatus_str._Bath 1 1
Frateuria_aurantia_DSM_6220 1 1
Xanthomonas_axonopodis_pv._citri_str._306 3 3
Xanthomonas_albilineans_GPE_PC73 5 5
Xanthomonas_oryzae_pv._oryzae_PXO99A 2 2
Legionella_longbeachae_NSW150 1 1
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1
Acinetobacter_oleivorans_DR1 1 1
Acinetobacter_calcoaceticus_PHEA-2 1 1
Acidilobus_saccharovorans_345-15 3 3
Metallosphaera_cuprina_Ar-4 3 3
Metallosphaera_sedula_DSM_5348 4 4
Acidianus_hospitalis_W1 2 2
Sulfolobus_tokodaii_str._7 4 4
Sulfolobus_islandicus_Y.N.15.51 4 4
Sulfolobus_solfataricus_P2 3 3
Sulfolobus_acidocaldarius_DSM_639 2 2
Vulcanisaeta_moutnovskia_768-28 1 1
Vulcanisaeta_distributa_DSM_14429 1 1
Caldivirga_maquilingensis_IC-167 1 1
Thermoproteus_uzoniensis_768-20 1 1
Thermoproteus_tenax_Kra_1 1 1
halophilic_archaeon_DL31 1 1
Methanocella_arvoryzae_MRE50 2 2
Methanocella_conradii_HZ254 3 3
Methanocella_paludicola_SANAE 4 4
Thermococcus_onnurineus_NA1 2 2
Thermococcus_kodakarensis_KOD1 1 1
Thermoplasma_volcanium_GSS1 3 3
Thermoplasma_acidophilum_DSM_1728 2 2
Picrophilus_torridus_DSM_9790 2 2
Aciduliprofundum_sp._MAR08-339 2 2
Aciduliprofundum_boonei_T469 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   26 26
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   33 33
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   22 22
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   7 7
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   23 23
Cryptococcus_neoformans_var._grubii_H99_ 2 2
Cryptococcus_neoformans_B-3501A_ 2 2
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb01_ 6 6
Paracoccidioides_brasiliensis_Pb03_ 5 5
Coccidioides_posadasii_str._Silveira_ 17 17
Coccidioides_immitis_RMSCC_3703_ 16 16
Coccidioides_immitis_RMSCC_2394_ 17 17
Coccidioides_immitis_H538.4_ 17 17
Ajellomyces_dermatitidis_ER-3_ 7 7
Histoplasma_capsulatum_H143 5 5
Histoplasma_capsulatum_H88 6 6
Histoplasma_capsulatum_G186AR 6 6
Aspergillus_fumigatus_A1163_ 10 10
Candida_albicans_WO-1_ 4 4
Saccharomyces_cerevisiae_UC5 5 5
Saccharomyces_cerevisiae_PW5 4 4
Saccharomyces_cerevisiae_FL100 2 2
Saccharomyces_cerevisiae_CLIB382 2 2
Saccharomyces_cerevisiae_CLIB324 3 3
Saccharomyces_cerevisiae_CBS7960 5 5
Saccharomyces_cerevisiae_YJM269 5 5
Saccharomyces_cerevisiae_T7 5 5
Saccharomyces_cerevisiae_FostersB 3 3
Saccharomyces_cerevisiae_FostersO 4 4
Saccharomyces_cerevisiae_VL3 4 4
Saccharomyces_cerevisiae_Vin13 4 4
Saccharomyces_cerevisiae_LalvinQA23 4 4
Saccharomyces_cerevisiae_AWRI796 4 4
Saccharomyces_cerevisiae_Sigma1278b 5 5
Saccharomyces_cerevisiae_W303 5 5
Saccharomyces_cerevisiae_JAY291 5 5
Saccharomyces_cerevisiae_AWRI1631 4 4
Saccharomyces_cerevisiae_YPS163 4 4
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 4 4
Saccharomyces_cerevisiae_Y10 2 2
Saccharomyces_cerevisiae_YJM789_ 5 5
Saccharomyces_cerevisiae_YJM789 5 5
Saccharomyces_cerevisiae_RM11-1a 5 5
Saccharomyces_cerevisiae_RM11-1a_ 5 5
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   5 5
Schizosaccharomyces_pombe_972h-_ 2 2
Batrachochytrium_dendrobatidis_JEL423_ 3 3
Batrachochytrium_dendrobatidis_JAM81_ 4 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4 4
Hordeum_vulgare_22   (Domesticated barley)   6 6
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4 4
Oscillatoria_nigro-viridis_PCC_7112 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 6 6
Nocardiopsis_alba_ATCC_BAA-2165 1 1
Streptomyces_albus_J1074 3 3
Streptomyces_rapamycinicus_NRRL_5491 3 3
Streptomyces_davawensis_JCM_4913 2 2
Streptomyces_fulvissimus_DSM_40593 6 6
Streptomyces_venezuelae_ATCC_10712 1 1
Streptomyces_collinus_Tu_365 3 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2 2
Saccharothrix_espanaensis_DSM_44229 16 16
Amycolatopsis_mediterranei_RB 4 4
Amycolatopsis_mediterranei_S699 4 4
Amycolatopsis_mediterranei_S699 4 4
Amycolatopsis_orientalis_HCCB10007 7 7
Actinoplanes_friuliensis_DSM_7358 4 4
Mycobacterium_smegmatis_str._MC2_155 1 1
Clavibacter_michiganensis_subsp._sepedonicus 3 3
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 3 3
Chthonomonas_calidirosea_T49 2 2
Deinococcus_peraridilitoris_DSM_19664 2 2
Sulfobacillus_acidophilus_TPY 3 3
Clostridium_acidurici_9a 1 1
Clostridium_kluyveri_NBRC_12016 1 1
Clostridium_pasteurianum_BC1 1 1
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Lactobacillus_brevis_KB290 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 3 3
Paenibacillus_polymyxa_SC2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2 2
Bacillus_amyloliquefaciens_LFB112 2 2
Bacillus_amyloliquefaciens_CC178 2 2
Bacillus_amyloliquefaciens_Y2 2 2
Bacillus_amyloliquefaciens_IT-45 2 2
Bacillus_amyloliquefaciens_XH7 2 2
Bacillus_amyloliquefaciens_LL3 2 2
Bacillus_amyloliquefaciens_TA208 2 2
Bacillus_amyloliquefaciens_DSM_7 2 2
Bacillus_licheniformis_9945A 2 2
Bacillus_subtilis_PY79 2 2
Bacillus_subtilis_XF-1 2 2
Bacillus_subtilis_QB928 2 2
Bacillus_subtilis_BSn5 2 2
Bacillus_subtilis_subsp._subtilis_str._BAB-1 2 2
Bacillus_subtilis_subsp._subtilis_str._BSP1 2 2
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 2 2
Bacillus_subtilis_subsp._subtilis_6051-HGW 2 2
Bacillus_subtilis_subsp._spizizenii_TU-B-10 2 2
Bacillus_subtilis_subsp._spizizenii_str._W23 2 2
Bacillus_subtilis_subsp._natto_BEST195 2 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_megaterium_WSH-002 1 1
Echinicola_vietnamensis_DSM_17526 1 1
Geobacter_sp._M18 2 2
Geobacter_sulfurreducens_PCA 1 1
Sorangium_cellulosum_So0157-2 2 2
Myxococcus_stipitatus_DSM_14675 4 4
Burkholderia_phenoliruptrix_BR3459a 1 1
Burkholderia_sp._YI23 1 1
Burkholderia_sp._CCGE1003 1 1
Burkholderia_sp._CCGE1001 1 1
Burkholderia_sp._KJ006 3 3
Burkholderia_thailandensis_MSMB121 3 3
Burkholderia_pseudomallei_MSHR305 4 4
Burkholderia_pseudomallei_NCTC_13179 4 4
Burkholderia_pseudomallei_BPC006 4 4
Burkholderia_pseudomallei_1026b 4 4
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 4 4
Burkholderia_pseudomallei_1710b 4 4
Burkholderia_pseudomallei_K96243 4 4
Burkholderia_mallei_NCTC_10229 3 3
Burkholderia_mallei_NCTC_10247 3 3
Burkholderia_mallei_ATCC_23344 3 3
Burkholderia_lata 4 4
Burkholderia_ambifaria_MC40-6 4 4
Burkholderia_cenocepacia_MC0-3 3 3
Burkholderia_cenocepacia_AU_1054 3 3
Burkholderia_cenocepacia_J2315 3 3
Burkholderia_multivorans_ATCC_17616 2 2
Burkholderia_cepacia_GG4 4 4
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1 1
Bradyrhizobium_oligotrophicum_S58 1 1
Bradyrhizobium_japonicum_USDA_6 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 3 3
Vibrio_fischeri_ES114 1 1
Vibrio_sp._EJY3 1 1
Vibrio_nigripulchritudo_VibrioScope 1 1
Vibrio_vulnificus_CMCP6 1 1
Vibrio_vulnificus_YJ016 1 1
Vibrio_cholerae_LMA3984-4 1 1
Vibrio_cholerae_M66-2 1 1
Vibrio_cholerae_O395 1 1
Vibrio_cholerae_IEC224 1 1
Vibrio_cholerae_O1_str._2010EL-1786 1 1
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1 1
Shewanella_sp._W3-18-1 1 1
Shewanella_sp._ANA-3 1 1
Shewanella_baltica_BA175 2 2
Shewanella_baltica_OS678 2 2
Shewanella_baltica_OS117 2 2
Shewanella_baltica_OS223 2 2
Shewanella_baltica_OS195 2 2
Shewanella_baltica_OS155 2 2
Shewanella_sp._MR-7 1 1
Shewanella_putrefaciens_200 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1 1
Alteromonas_macleodii_AltDE1 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_str._'Black_Sea_11' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Xanthomonas_citri_subsp._citri_Aw12879 3 3
Xanthomonas_campestris_pv._vesicatoria_str._85-10 3 3
Xanthomonas_axonopodis_pv._citrumelo_F1 3 3
Xanthomonas_axonopodis_Xac29-1 3 3
Xanthomonas_oryzae_pv._oryzicola_BLS256 3 3
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 2 2
Xanthomonas_oryzae_pv._oryzae_KACC_10331 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Acinetobacter_genomosp._13TU__RUH2624 1 1
Acinetobacter_sp.__SH024 1 1
Acinetobacter_baumannii_ZW85-1 1 1
Acinetobacter_baumannii_TYTH-1 1 1
Acinetobacter_baumannii_BJAB0868 1 1
Acinetobacter_baumannii_BJAB0715 1 1
Acinetobacter_baumannii_BJAB07104 1 1
Acinetobacter_baumannii_TCDC-AB0715 1 1
Acinetobacter_baumannii_D1279779 1 1
Acinetobacter_baumannii_MDR-TJ 1 1
Acinetobacter_baumannii_1656-2 1 1
Acinetobacter_baumannii__ATCC_19606 1 1
Acinetobacter_baumannii_AB307-0294 1 1
Acinetobacter_baumannii_AYE 1 1
Acinetobacter_baumannii_MDR-ZJ06 1 1
Acinetobacter_baumannii_AB0057 1 1
Acinetobacter_baumannii_ACICU 1 1
Acinetobacter_junii__SH205 1 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 1 1
Caldisphaera_lagunensis_DSM_15908 1 1
Sulfolobus_islandicus_LAL14/1 4 4
Sulfolobus_islandicus_REY15A 4 4
Sulfolobus_islandicus_HVE10/4 4 4
Sulfolobus_islandicus_Y.G.57.14 4 4
Sulfolobus_islandicus_L.S.2.15 4 4
Sulfolobus_islandicus_M.16.27 4 4
Sulfolobus_islandicus_M.14.25 4 4
Sulfolobus_islandicus_M.16.4 4 4
Sulfolobus_islandicus_L.D.8.5 4 4
Sulfolobus_solfataricus_98/2 3 3
Sulfolobus_acidocaldarius_SUSAZ 2 2
Sulfolobus_acidocaldarius_Ron12/I 2 2
Sulfolobus_acidocaldarius_N8 2 2
Methanomethylovorans_hollandica_DSM_15978 1 1
Methanolobus_psychrophilus_R15 1 1
Thermococcus_sp._CL1 1 1
Pyrococcus_sp._NA2 1 1
Halovivax_ruber_XH-70 2 2
Natronococcus_occultus_SP4 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   19 19
Pan_troglodytes_69_2.1.4   (Chimpanzee)   17 17
Gorilla_gorilla_69_3.1   (Western gorilla)   15 15
Pongo_abelii_69_2   (Sumatran orangutan)   15 15
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   14 14
Macaca_mulatta_69_1   (Rhesus monkey)   16 16
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   17 17
Otolemur_garnettii_69_3   (Small-eared galago)   13 13
Microcebus_murinus_69_1   (Gray mouse lemur)   14 14
Rattus_norvegicus_69_3.4   (Norway rat)   20 20
Mus_musculus_69_38   (House mouse)   17 17
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   13 13
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   16 16
Cavia_porcellus_69_3   (Domestic guinea pig)   15 15
Oryctolagus_cuniculus_69_2   (Rabbit)   13 13
Ochotona_princeps_69   (American pika)   13 13
Tupaia_belangeri_69   (Northern tree shrew)   9 9
Sus_scrofa_69_10.2   (Pig)   17 17
Bos_taurus_69_3.1   (Cattle)   13 13
Vicugna_pacos_69_1   (Alpaca)   11 11
Tursiops_truncatus_69_1   (Bottlenose dolphin)   15 15
Mustela_putorius_furo_69_1.0   (Domestic ferret)   14 14
Ailuropoda_melanoleuca_69_1   (Giant panda)   15 15
Canis_familiaris_69_3.1   (Dog)   14 14
Felis_catus_69   (Domestic cat)   9 9
Equus_caballus_69_2   (Horse)   14 13
Myotis_lucifugus_69_2.0   (Little brown bat)   12 12
Pteropus_vampyrus_69_1   (Large flying fox)   14 14
Sorex_araneus_69_1   (European shrew)   8 8
Erinaceus_europaeus_69   (Western European hedgehog)   11 11
Procavia_capensis_69_1   (Cape rock hyrax)   12 12
Loxodonta_africana_69_3   (African savanna elephant)   13 13
Echinops_telfairi_69   (Small Madagascar hedgehog)   12 12
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   11 11
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   10 10
Macropus_eugenii_69_1.0   (Tammar wallaby)   13 13
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   17 17
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   15 15
Ornithorhynchus_anatinus_69_5   (Platypus)   10 10
Petromyzon_marinus_69_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_69_2   (Turkey)   11 11
Gallus_gallus_69_2   (Chicken)   12 12
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   12 12
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   13 13
Anolis_carolinensis_69_2.0   (Green anole)   12 12
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   16 16
Latimeria_chalumnae_69_1   (Coelacanth)   10 9
Gadus_morhua_69_1   (Atlantic cod)   11 11
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   13 13
Takifugu_rubripes_69_4   (Torafugu)   11 11
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   14 14
Oryzias_latipes_69_1   (Japanese medaka)   15 15
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   16 16
Oreochromis_niloticus_69_1.0   (Nile tilapia)   13 13
Danio_rerio_69_9   (Zebrafish)   16 16
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   11 10
Ciona_intestinalis_69   (Vase tunicate)   11 11
Drosophila_melanogaster_69_5   (Fruit fly)   20 20
Caenorhabditis_elegans_69_215   (Roundworm)   11 11
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   5 5
Arabidopsis_thaliana_10   (Thale cress)   5 5

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   62 62
Homo_sapiens__(NCBI_version)   (Human)   31 31
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   17 17
Heliconius_numata__(Incomplete) 3 3
Loa_loa_v3.3_(Request)   (Eye worm)   6 6
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   5 5
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   5 5
Moniliophthora_perniciosa_FA553__(Genome_survey) 5 5
Encephalitozoon_intestinalis__(endoparasite) 1 1
Encephalitozoon_cuniculi_(endoparasite) 1 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1 1
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   10 10
Ricinus_communis__(Early_assembly)   (Castor bean)   5 5
Nicotiana_benthamiana_0.4.4_(Early_draft) 7 7
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   7 7
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   7 7
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 2 2
NCBI_plasmid_sequences_(Plasmids) 12 12
NCBI_viral_sequences_(Viral) 1 1
PDB_chains_(SCOP_1.75)_(PDB) 16 16
Protein_Data_Bank_(all_PDB_sequenc) 110 110
TargetDB__(Targets) 162 162
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 212 212
STRING_v9.0.5_(STRING) 1464 1456
Uniprot_2018_03_genome 22481 22308
NCBI_2017_08_genome 30782 30742

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