SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for Nucleotide cyclase superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Nucleotide cyclase domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   87 65
Pan_troglodytes_76_2.1.4   (Chimpanzee)   25 17
Gorilla_gorilla_76_3.1   (Western gorilla)   38 26
Pongo_abelii_76_2   (Sumatran orangutan)   29 20
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   29 19
Papio_anubis_76   (Olive baboon)   34 22
Macaca_mulatta_76_1   (Rhesus monkey)   49 34
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   75 53
Otolemur_garnettii_76_3   (Small-eared galago)   33 22
Microcebus_murinus_76_1   (Gray mouse lemur)   29 19
Rattus_norvegicus_76_5.0   (Norway rat)   32 22
Mus_musculus_76_38   (House mouse)   62 40
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   28 18
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   28 19
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   30 20
Cavia_porcellus_76_3   (Domestic guinea pig)   29 20
Oryctolagus_cuniculus_76_2   (Rabbit)   34 23
Ochotona_princeps_76   (American pika)   28 18
Tupaia_belangeri_76   (Northern tree shrew)   28 19
Sus_scrofa_76_10.2   (Pig)   39 27
Bos_taurus_76_3.1   (Cattle)   33 22
Ovis_aries_76_3.1   (Sheep)   37 25
Vicugna_pacos_76_1   (Alpaca)   20 14
Tursiops_truncatus_76_1   (Bottlenose dolphin)   29 19
Mustela_putorius_furo_76_1.0   (Domestic ferret)   30 20
Ailuropoda_melanoleuca_76_1   (Giant panda)   35 24
Canis_familiaris_76_3.1   (Dog)   49 33
Felis_catus_76_6.2   (Domestic cat)   35 24
Equus_caballus_76_2   (Horse)   44 28
Myotis_lucifugus_76_2.0   (Little brown bat)   33 24
Pteropus_vampyrus_76_1   (Large flying fox)   27 19
Sorex_araneus_76_1   (European shrew)   18 15
Erinaceus_europaeus_76   (Western European hedgehog)   30 18
Procavia_capensis_76_1   (Cape rock hyrax)   28 19
Loxodonta_africana_76_3   (African savanna elephant)   42 28
Echinops_telfairi_76   (Small Madagascar hedgehog)   28 18
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   39 26
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   17 12
Macropus_eugenii_76_1.0   (Tammar wallaby)   30 18
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   37 25
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   30 21
Ornithorhynchus_anatinus_76_5   (Platypus)   33 29
Saccoglossus_kowalevskii_v3.0 79 72
Petromyzon_marinus_76_7.0   (Sea lamprey)   20 17
Meleagris_gallopavo_76_2   (Turkey)   31 23
Gallus_gallus_76_4   (Chicken)   34 23
Anas_platyrhynchos_76_1.0   (Mallard)   25 18
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   26 22
Ficedula_albicollis_76_1.0   (Collared flycatcher)   23 16
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   44 30
Anolis_carolinensis_76_2.0   (Green anole)   33 23
Xenopus_laevis_   (African clawed frog)   22 18
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   34 25
Latimeria_chalumnae_76_1   (Coelacanth)   36 27
Lepisosteus_oculatus_76   (Spotted gar)   55 39
Gadus_morhua_76_1   (Atlantic cod)   57 38
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   72 52
Takifugu_rubripes_76_4   (Torafugu)   279 171
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   50 37
Oryzias_latipes_76_1   (Japanese medaka)   54 36
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   46 30
Poecilia_formosa_76   (Amazon molly)   48 31
Oreochromis_niloticus_76_1.0   (Nile tilapia)   69 45
Astyanax_mexicanus_76   (Mexican tetra)   48 36
Danio_rerio_76_9   (Zebrafish)   69 48
Oikopleura_dioica 13 11
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   63 46
Ciona_intestinalis_76   (Vase tunicate)   19 15
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   51 45
Adineta_vaga 53 42
Octopus_bimaculoides_280 31 31
Crassostrea_gigas_22   (Pacific oyster)   54 48
Lottia_gigantea_   (Owl limpet)   54 49
Helobdella_robusta_ 45 44
Capitella_sp._I_ 93 88
Danaus_plexippus_OGS1.0   (Monarch butterfly)   33 25
Heliconius_melpomene_   (Postman butterfly)   23 19
Bombyx_mori_   (Domestic silkworm)   29 28
Nasonia_vitripennis_   (Jewel wasp)   21 16
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   84 64
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   30 22
Linepithema_humile_v1.1   (Argentine ant)   29 20
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   31 22
Solenopsis_invicta_v.2.2.3   (Red fire ant)   25 18
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   25 17
Atta_cephalotes_v1.1 29 21
Camponotus_floridanus_v3.3   (Florida carpenter ant)   23 17
Lucilia_cuprina   (Australian sheep blowfly)   22 17
Drosophila_grimshawi_1.3 34 24
Drosophila_willistoni_1.3 31 22
Drosophila_pseudoobscura_2.13 35 24
Drosophila_persimilis_1.3 31 22
Drosophila_suzukii 44 22
Drosophila_yakuba_1.3 41 27
Drosophila_simulans_1.3 36 26
Drosophila_sechellia_1.3 37 27
Drosophila_melanogaster_76_5   (Fruit fly)   90 62
Drosophila_erecta_1.3 38 25
Drosophila_ananassae_1.3 41 26
Drosophila_virilis_1.2 32 22
Drosophila_mojavensis_1.3 35 23
Megaselia_scalaris_22 16 15
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   31 24
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   31 26
Anopheles_darlingi_22   (American malaria mosquito)   26 21
Anopheles_gambiae_49_3j   (African malaria mosquito)   31 23
Tribolium_castaneum_3.0   (Red flour beetle)   35 24
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   25 17
Acyrthosiphon_pisum_   (Pea aphid)   17 13
Rhodnius_prolixus_22 21 15
Daphnia_pulex_   (Common water flea)   36 30
Strigamia_maritima_22 31 25
Sarcoptes_scabiei 23 22
Tetranychus_urticae_   (Two-spotted spider mite)   21 17
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   30 26
Pristionchus_pacificus_ 49 47
Meloidogyne_incognita_   (Southern root-knot nematode)   30 26
Meloidogyne_hapla_ 10 10
Onchocerca_volvulus_22 17 15
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   16 14
Caenorhabditis_japonica_ 58 54
Caenorhabditis_brenneri_ 44 40
Caenorhabditis_remanei_ 47 43
Caenorhabditis_elegans_76_235   (Roundworm)   55 51
Caenorhabditis_briggsae_2 43 37
Trichinella_spiralis_22 7 6
Hymenolepis_microstoma_ 9 7
Echinococcus_multilocularis_ 15 11
Echinococcus_granulosus_ 13 10
Taenia_solium_   (Pork tapeworm)   26 22
Schistosoma_mansoni_ 18 18
Mnemiopsis_leidyi   (Sea walnut)   20 17
Thelohanellus_kitauei 4 4
Acropora_digitifera_v1.0 24 20
Nematostella_vectensis_1.0   (Starlet sea anemone)   49 45
Hydra_vulgaris 21 18
Amphimedon_queenslandica 23 16
Trichoplax_adhaerens_ 36 31
Proterospongia_sp._ATCC_50818_ 37 33
Monosiga_brevicollis_ 23 20
Sphaeroforma_arctica_JP610_ 13 12
Capsaspora_owczarzaki_ATCC_30864_ 11 9
Conidiobolus_coronatus_NRRL28638_v1.0 2 2
Mortierella_verticillata_NRRL_6337_ 6 4
Phycomyces_blakesleeanus_ 6 4
Rhizopus_oryzae_RA_99-880_ 6 5
Mucor_circinelloides_ 6 4
Rhizomucor_miehei_CAU432_ 4 4
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 1 1
Piloderma_croceum_F_1598_v1.0 1 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 1 1
Hydnomerulius_pinastri_v2.0 1 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1 1
Pisolithus_microcarpus_441_v1.0 1 1
Pisolithus_tinctorius_Marx_270_v1.0 1 1
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 1 1
Pleurotus_ostreatus_   (Oyster mushroom)   1 1
Amanita_thiersii_Skay4041_v1.0 1 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Galerina_marginata_v1.0 2 2
Hebeloma_cylindrosporum_h7_v2.0 2 2
Laccaria_bicolor_S238N-H82_ 2 2
Agaricus_bisporus_var._bisporus_ 1 1
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2 2
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 1 1
Punctularia_strigosozonata_v1.0 1 1
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 3 3
Tulasnella_calospora_AL13/4D_v1.0 3 3
Postia_placenta_ 1 1
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Dichomitus_squalens 1 1
Trametes_versicolor_v1.0 1 1
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 1 1
Apiospora_montagnei_NRRL_25634_v1.0 1 1
Magnaporthe_grisea_70-15_ 1 1
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 1 1
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 1 1
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 1 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1 1
Fusarium_verticillioides_7600_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 2
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 1 1
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1 1
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 1 1
Stagonospora_nodorum_ 1 1
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 1 1
Dothistroma_septosporum 1 1
Septoria_musiva_v1.0 1 1
Mycosphaerella_fijiensis_CIRAD86_ 1 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 1 1
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_glaucus 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 1 1
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Hansenula_polymorpha_v2.0 1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Debaromyces_hansenii 1 1
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 1 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 1 1
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 1 1
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 19 16
Allomyces_macrogynus_ATCC_38327_ 30 26
Spizellomyces_punctatus_DAOM_BR117_ 19 14
Dictyostelium_discoideum 9 6
Dictyostelium_purpureum_ 8 5
Selaginella_moellendorffii_ 2 2
Physcomitrella_patens 1 1
Coccomyxa_subellipsoidea_sp._C-169_v2 7 4
Asterochloris_sp._Cgr/DA1pho_v1.0 29 21
Chlorella_variabilis_sp._NC64A_ 7 5
Chlorella_vulgaris_ 7 3
Volvox_carteri_f._nagariensis_ 153 120
Volvox_carteri_v199 103 76
Chlamydomonas_reinhardtii_4.0 161 126
Ostreococcus_sp._RCC809_ 4 4
Ostreococcus_lucimarinus_CCE9901_ 3 3
Ostreococcus_tauri_ 6 4
Bathycoccus_prasinos_ 5 3
Micromonas_sp._RCC299_ 8 5
Micromonas_pusilla_CCMP1545_v3.0 8 5
Thecamonas_trahens_ATCC_50062_ 94 69
Bigelowiella_natans_CCMP2755_22 14 10
Giardia_lamblia_2.3 3 2
Cyanophora_paradoxa_ 149 146
Leishmania_mexicana_2.4 12 11
Leishmania_major_strain_Friedlin_ 16 15
Leishmania_infantum_JPCM5_2.4 12 11
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 15 14
Trypanosoma_vivax_ 29 28
Trypanosoma_cruzi_strain_CL_Brener 12 11
Trypanosoma_congolense_2.4 65 65
Trypanosoma_brucei_gambiense_v4.1 50 49
Trypanosoma_brucei_TREU927_v4.1 68 67
Ectocarpus_siliculosus 16 10
Aureococcus_anophagefferens_ 10 6
Albugo_laibachii_22 13 10
Pythium_iwayamai_DAOM_BR242034_22 17 12
Pythium_arrhenomanes_ATCC_12531_22 20 15
Pythium_ultimum_v1.7-2 22 16
Pythium_aphanidermatum_DAOM_BR444_22 19 14
Pythium_irregulare_DAOM_BR486_22 20 14
Pythium_vexans_DAOM_BR484_22 19 14
Phytophthora_ramorum_1.1   (Sudden oak death agent)   20 15
Phytophthora_sojae_1.1 22 17
Phytophthora_infestans_T30-4_ 20 14
Phytophthora_capsici_ 20 18
Hyaloperonospora_arabidopsidis_22 12 10
Phaeodactylum_tricornutumCCAP_1055/1 29 27
Fragilariopsis_cylindrus 20 20
Thalassiosira_pseudonana_CCMP1335 28 24
Perkinsus_marinus_ATCC_50983_ 36 33
Paramecium_tetraurelia_ 103 62
Tetrahymena_thermophila_SB210_1_ 38 23
Ichthyophthirius_multifiliis_strain_G5_ 47 34
Cryptosporidium_hominis 6 4
Cryptosporidium_muris 6 4
Cryptosporidium_parvum_Iowa_II 6 4
Neospora_caninum 7 5
Toxoplasma_gondii_VEG 7 5
Toxoplasma_gondii_ME49 7 5
Toxoplasma_gondii_GT1 7 5
Babesia_bovis_T2Bo_ 8 4
Theileria_parva__ 4 2
Theileria_annulata 4 2
Plasmodium_falciparum_3D7_ 9 6
Plasmodium_vivax_SaI-1_7.0 7 4
Plasmodium_knowlesi_strain_H_ 7 4
Plasmodium_yoelii_ssp._yoelii_1_ 8 6
Plasmodium_chabaudi_ 7 4
Plasmodium_berghei_ANKA_ 7 4
Symbiodinium_minutum_clade_B1_v1.2 58 50
Naegleria_gruberi_ 190 186
Trichomonas_vaginalis_ 116 116
Guillardia_theta_CCMP2712_v1.0_ 77 74
Emiliania_huxleyi_CCMP1516_ 27 25
Thermobaculum_terrenum_ATCC_BAA-798 6 6
Leptolyngbya_sp._PCC_7376 62 62
Pseudanabaena_sp._PCC_7367 30 29
Acaryochloris_marina_MBIC11017 63 62
Synechocystis_sp._PCC_6803 26 25
Thermosynechococcus_sp._NK55 12 12
Thermosynechococcus_elongatus_BP-1 12 12
Synechococcus_sp._PCC_7502 23 23
Synechococcus_sp._PCC_6312 17 17
Synechococcus_sp._CC9311 5 5
Synechococcus_elongatus_PCC_7942 19 19
Microcoleus_sp._PCC_7113 55 55
Trichodesmium_erythraeum_IMS101 17 17
Geitlerinema_sp._PCC_7407 36 36
Cyanothece_sp._PCC_8802 25 25
Gloeocapsa_sp._PCC_7428 18 18
Halothece_sp._PCC_7418 22 20
Microcystis_aeruginosa_NIES-843 3 3
Gloeobacter_violaceus_PCC_7421 2 2
Rivularia_sp._PCC_7116 24 24
Calothrix_sp._PCC_7507 21 20
Anabaena_variabilis_ATCC_29413 19 19
'Nostoc_azollae'_0708 6 6
Nostoc_sp._PCC_7107 27 26
Nostoc_punctiforme_PCC_73102 29 29
Nostoc_sp._PCC_7120 20 20
Nostoc_sp._PCC_7524 17 17
Anabaena_sp._90 5 5
Mycoplasma_mobile_163K 1 1
Mycoplasma_fermentans_M64 1 1
Mycoplasma_pulmonis_UAB_CTIP 1 1
Conexibacter_woesei_DSM_14684 25 25
Eggerthella_sp._YY7918 23 20
Eggerthella_lenta_DSM_2243 22 19
Slackia_heliotrinireducens_DSM_20476 2 2
Olsenella_uli_DSM_7084 1 1
Rubrobacter_xylanophilus_DSM_9941 9 9
Ilumatobacter_coccineus 33 33
Acidimicrobium_ferrooxidans_DSM_10331 11 11
Thermobispora_bispora_DSM_43833 4 4
Nakamurella_multipartita_DSM_44233 11 11
Acidothermus_cellulolyticus_11B 14 14
Modestobacter_marinus 38 38
Blastococcus_saxobsidens_DD2 30 30
Geodermatophilus_obscurus_DSM_43160 30 30
Kineococcus_radiotolerans_SRS30216 75 75
Catenulispora_acidiphila_DSM_44928 18 17
Stackebrandtia_nassauensis_DSM_44728 11 11
Frankia_symbiont_of_Datisca_glomerata 14 13
Frankia_sp._EAN1pec 49 42
Frankia_alni_ACN14a 22 19
Thermobifida_fusca_YX 4 4
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 5 5
Thermomonospora_curvata_DSM_43183 8 8
Streptosporangium_roseum_DSM_43021 5 5
Kitasatospora_setae_KM-6054 10 10
Streptomyces_coelicolor_A3(2) 11 11
Streptomyces_sp._PAMC26508 9 9
Streptomyces_flavogriseus_ATCC_33331 9 9
Streptomyces_sp._SirexAA-E 10 10
Streptomyces_griseus_subsp._griseus_NBRC_13350 9 9
Streptomyces_bingchenggensis_BCW-1 9 9
Streptomyces_violaceusniger_Tu_4113 10 10
Streptomyces_avermitilis_MA-4680 10 10
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 7 7
Streptomyces_scabiei_87.22 8 8
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 9 9
Actinosynnema_mirum_DSM_43827 23 23
Saccharomonospora_viridis_DSM_43017 7 7
Pseudonocardia_dioxanivorans_CB1190 9 9
Saccharopolyspora_erythraea_NRRL_2338 27 27
Amycolatopsis_mediterranei_U32 28 28
Kribbella_flavida_DSM_17836 7 7
Nocardioides_sp._JS614 5 5
Microlunatus_phosphovorus_NM-1 3 2
Salinispora_arenicola_CNS-205 18 18
Salinispora_tropica_CNB-440 16 16
Verrucosispora_maris_AB-18-032 24 24
Micromonospora_sp._L5 21 21
Micromonospora_aurantiaca_ATCC_27029 21 21
Actinoplanes_sp._N902-109 71 70
Actinoplanes_sp._SE50/110 110 107
Actinoplanes_missouriensis_431 60 59
Segniliparus_rotundus_DSM_44985 3 3
Tsukamurella_paurometabola_DSM_20162 13 13
Gordonia_sp._KTR9 9 9
Gordonia_polyisoprenivorans_VH2 13 13
Gordonia_bronchialis_DSM_43247 7 7
Rhodococcus_jostii_RHA1 16 15
Rhodococcus_equi_103S 4 4
Rhodococcus_opacus_B4 15 14
Rhodococcus_erythropolis_PR4 22 22
Nocardia_cyriacigeorgica_GUH-2 11 11
Nocardia_farcinica_IFM_10152 12 12
Amycolicicoccus_subflavus_DQS3-9A1 12 12
Mycobacterium_massiliense_str._GO_06 8 8
Mycobacterium_abscessus_ATCC_19977 9 9
Mycobacterium_sp._JLS 26 26
Mycobacterium_intracellulare_ATCC_13950 22 21
Mycobacterium_avium_104 19 18
Mycobacterium_vanbaalenii_PYR-1 25 25
Mycobacterium_canettii_CIPT_140010059 18 18
Mycobacterium_africanum_GM041182 16 16
Mycobacterium_tuberculosis_KZN_1435 18 18
Mycobacterium_tuberculosis 18 18
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 17 17
Mycobacterium_rhodesiae_NBB3 27 27
Mycobacterium_ulcerans_Agy99 15 15
Mycobacterium_gilvum_PYR-GCK 36 36
Mycobacterium_chubuense_NBB4 30 30
Mycobacterium_marinum_M 32 32
Mycobacterium_smegmatis_str._MC2_155 11 11
Mycobacterium_leprae_Br4923 7 7
Corynebacterium_resistens_DSM_45100 1 1
Corynebacterium_aurimucosum_ATCC_700975 1 1
Corynebacterium_kroppenstedtii_DSM_44385 1 1
Corynebacterium_efficiens_YS-314 1 1
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_urealyticum_DSM_7109 1 1
Corynebacterium_jeikeium_K411 1 1
Corynebacterium_variabile_DSM_44702 1 1
Corynebacterium_pseudotuberculosis_316 1 1
Corynebacterium_glutamicum_R 2 2
Corynebacterium_diphtheriae_NCTC_13129 1 1
Sanguibacter_keddieii_DSM_10542 3 3
Kytococcus_sedentarius_DSM_20547 3 3
Beutenbergia_cavernae_DSM_12333 3 3
Microbacterium_testaceum_StLB037 2 2
Jonesia_denitrificans_DSM_20603 1 1
Intrasporangium_calvum_DSM_43043 2 2
Brachybacterium_faecium_DSM_4810 1 1
Isoptericola_variabilis_225 1 1
Xylanimonas_cellulosilytica_DSM_15894 1 1
Cellulomonas_flavigena_DSM_20109 9 9
Cellulomonas_fimi_ATCC_484 10 10
[Cellvibrio]_gilvus_ATCC_13127 11 11
Arthrobacter_phenanthrenivorans_Sphe3 4 4
Arthrobacter_chlorophenolicus_A6 5 5
Arthrobacter_aurescens_TC1 7 7
Arthrobacter_arilaitensis_Re117 1 1
Kocuria_rhizophila_DC2201 1 1
Rothia_mucilaginosa_DY-18 1 1
Rothia_dentocariosa_ATCC_17931 1 1
Arthrobacter_sp._Rue61a 6 6
Arthrobacter_sp._FB24 6 6
Renibacterium_salmoninarum_ATCC_33209 1 1
Micrococcus_luteus_NCTC_2665 1 1
Bifidobacterium_longum_subsp._longum_JDM301 1 1
Bifidobacterium_breve_ACS-071-V-Sch8b 2 2
Arcanobacterium_haemolyticum_DSM_20595 1 1
Actinomyces_sp._F0330 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 3 2
Dehalococcoides_ethenogenes_195 1 1
Dehalococcoides_sp._BAV1 1 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 2 2
Anaerolinea_thermophila_UNI-1 21 21
Thermomicrobium_roseum_DSM_5159 5 5
Sphaerobacter_thermophilus_DSM_20745 10 10
Herpetosiphon_aurantiacus_DSM_785 34 29
Roseiflexus_sp._RS-1 16 15
Roseiflexus_castenholzii_DSM_13941 17 16
Chloroflexus_sp._MS-G 26 22
Chloroflexus_sp._Y-400-fl 32 27
Chloroflexus_aggregans_DSM_9485 26 22
Chloroflexus_aurantiacus_J-10-fl 32 27
Truepera_radiovictrix_DSM_17093 10 10
Deinococcus_gobiensis_I-0 27 27
Deinococcus_deserti_VCD115 36 36
Deinococcus_maricopensis_DSM_21211 48 48
Deinococcus_geothermalis_DSM_11300 13 13
Deinococcus_proteolyticus_MRP 17 17
Deinococcus_radiodurans_R1 16 16
Oceanithermus_profundus_DSM_14977 12 12
Marinithermus_hydrothermalis_DSM_14884 10 10
Meiothermus_silvanus_DSM_9946 19 18
Meiothermus_ruber_DSM_1279 16 16
Thermus_sp._CCB_US3_UF1 7 7
Thermus_scotoductus_SA-01 10 10
Thermus_thermophilus_HB27 9 9
Megasphaera_elsdenii_DSM_20460 7 5
Acidaminococcus_intestini_RyC-MR95 3 2
Acidaminococcus_fermentans_DSM_20731 12 8
Megamonas_hypermegale 1 1
Selenomonas_sputigena_ATCC_35185 11 11
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 16 16
Natranaerobius_thermophilus_JW/NM-WN-LF 12 12
Symbiobacterium_thermophilum_IAM_14863 10 10
Clostridium_clariflavum_DSM_19732 17 17
Eubacterium_siraeum 9 9
Clostridium_cellulolyticum_H10 4 4
Clostridium_thermocellum_ATCC_27405 10 10
Ethanoligenens_harbinense_YUAN-3 11 10
Faecalibacterium_prausnitzii 12 11
Ruminococcus_sp. 10 9
Ruminococcus_albus_7 36 36
Thermaerobacter_marianensis_DSM_12885 2 2
Sulfobacillus_acidophilus_DSM_10332 10 10
Oscillibacter_valericigenes_Sjm18-20 17 16
butyrate-producing_bacterium_SS3/4 1 1
butyrate-producing_bacterium_SM4/1 4 3
Candidatus_Desulforudis_audaxviator_MP104C 14 14
Thermincola_potens_JR 15 15
Pelotomaculum_thermopropionicum_SI 10 10
Desulfosporosinus_acidiphilus_SJ4 24 24
Desulfosporosinus_orientis_DSM_765 20 20
Dehalobacter_sp._DCA 19 19
Dehalobacter_sp._CF 17 17
Syntrophobotulus_glycolicus_DSM_8271 19 19
Desulfitobacterium_hafniense_Y51 21 20
Desulfitobacterium_dehalogenans_ATCC_51507 16 16
Desulfotomaculum_reducens_MI-1 15 15
Desulfotomaculum_acetoxidans_DSM_771 18 17
Desulfotomaculum_kuznetsovii_DSM_6115 18 18
Desulfotomaculum_carboxydivorans_CO-1-SRB 8 8
Desulfotomaculum_ruminis_DSM_2154 20 19
Acetobacterium_woodii_DSM_1030 62 62
Eubacterium_eligens_ATCC_27750 19 19
Eubacterium_limosum_KIST612 46 41
Clostridium_difficile_630 38 36
Clostridium_sticklandii_DSM_519 31 31
Clostridium_saccharolyticum_WM1 19 19
Clostridium_phytofermentans_ISDg 13 13
Clostridium_lentocellum_DSM_5427 7 7
[Ruminococcus]_obeum 9 9
[Ruminococcus]_torques 5 4
Eubacterium_rectale_M104/1 17 16
Eubacterium_rectale_ATCC_33656 19 18
Coprococcus_sp._ART55/1 13 11
Roseburia_hominis_A2-183 23 22
Roseburia_intestinalis 23 22
Butyrivibrio_proteoclasticus_B316 54 54
Butyrivibrio_fibrisolvens 21 21
Syntrophothermus_lipocalidus_DSM_12680 9 9
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 8 8
Heliobacterium_modesticaldum_Ice1 9 8
Alkaliphilus_oremlandii_OhILAs 14 14
Alkaliphilus_metalliredigens_QYMF 14 14
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1 1
Clostridium_sp._BNL1100 6 6
Clostridium_novyi_NT 6 6
Clostridium_ljungdahlii_DSM_13528 21 21
Clostridium_kluyveri_DSM_555 10 10
Clostridium_beijerinckii_NCIMB_8052 24 24
Clostridium_tetani_E88 6 6
Clostridium_perfringens_ATCC_13124 7 7
Clostridium_cellulovorans_743B 8 8
Clostridium_botulinum_A_str._ATCC_3502 9 9
Clostridium_acetobutylicum_ATCC_824 10 10
Mahella_australiensis_50-1_BON 4 4
Thermosediminibacter_oceani_DSM_16646 2 2
Caldicellulosiruptor_obsidiansis_OB47 7 7
Caldicellulosiruptor_kronotskyensis_2002 7 7
Caldicellulosiruptor_hydrothermalis_108 7 7
Caldicellulosiruptor_owensensis_OL 10 10
Caldicellulosiruptor_lactoaceticus_6A 5 5
Caldicellulosiruptor_kristjanssonii_177R1B 5 5
Caldicellulosiruptor_saccharolyticus_DSM_8903 8 8
Caldicellulosiruptor_bescii_DSM_6725 7 7
Thermoanaerobacterium_xylanolyticum_LX-11 8 8
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2 2
Thermodesulfobium_narugense_DSM_14796 20 20
Coprothermobacter_proteolyticus_DSM_5265 2 2
Tepidanaerobacter_acetatoxydans_Re1 4 4
Thermoanaerobacter_tengcongensis_MB4 6 6
Carboxydothermus_hydrogenoformans_Z-2901 11 11
Moorella_thermoacetica_ATCC_39073 9 9
Ammonifex_degensii_KC4 9 9
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 3 3
Thermoanaerobacter_pseudethanolicus_ATCC_33223 3 3
Thermoanaerobacter_sp._X514 4 4
Thermoanaerobacter_italicus_Ab9 5 5
Thermoanaerobacter_wiegelii_Rt8.B1 9 9
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 3 3
Acetohalobium_arabaticum_DSM_5501 7 6
Halothermothrix_orenii_H_168 6 6
Halanaerobium_hydrogeniformans 27 27
Halanaerobium_praevalens_DSM_2228 18 18
Carnobacterium_sp._17-4 5 5
Carnobacterium_sp._WN1359 1 1
Enterococcus_faecalis_62 1 1
Weissella_koreensis_KACC_15510 5 5
Oenococcus_oeni_PSU-1 1 1
Leuconostoc_citreum_KM20 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1 1
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_rhamnosus_Lc_705 3 3
Lactobacillus_salivarius_CECT_5713 2 2
Lactobacillus_amylovorus_GRL1118 1 1
Lactobacillus_reuteri_DSM_20016 1 1
Lactobacillus_plantarum_JDM1 4 4
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 6 6
Lactobacillus_brevis_ATCC_367 2 2
Pediococcus_claussenii_ATCC_BAA-344 3 3
Pediococcus_pentosaceus_ATCC_25745 2 2
Lactococcus_garvieae_ATCC_49156 2 2
Streptococcus_gallolyticus_UCN34 1 1
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Exiguobacterium_sp._MH3 27 27
Exiguobacterium_sp._AT1b 26 25
Exiguobacterium_sibiricum_255-15 25 25
Kyrpidia_tusciae_DSM_2912 3 3
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 9 8
Brevibacillus_brevis_NBRC_100599 14 14
Paenibacillus_sp._JDR-2 16 16
Paenibacillus_terrae_HPL-003 9 9
Paenibacillus_mucilaginosus_3016 35 34
Paenibacillus_polymyxa_M1 10 10
Bacillus_selenitireducens_MLS10 47 47
Listeria_welshimeri_serovar_6b_str._SLCC5334 4 4
Listeria_innocua_Clip11262 4 4
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 4 4
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 4 4
Listeria_ivanovii_subsp._ivanovii_PAM_55 3 3
Solibacillus_silvestris_StLB046 19 19
Geobacillus_thermoglucosidasius_C56-YS93 8 8
Lysinibacillus_sphaericus_C3-41 19 19
Oceanobacillus_iheyensis_HTE831 3 3
Anoxybacillus_flavithermus_WK1 14 14
Geobacillus_thermoleovorans_CCB_US3_UF5 7 7
Geobacillus_kaustophilus_HTA426 8 8
Geobacillus_sp._GHH01 7 7
Geobacillus_sp._WCH70 5 5
Geobacillus_thermodenitrificans_NG80-2 7 7
Halobacillus_halophilus_DSM_2266 7 7
Bacillus_sp._JS 4 4
Bacillus_sp._1NLA3E 12 12
Bacillus_amyloliquefaciens_FZB42 3 3
Bacillus_atrophaeus_1942 3 3
Bacillus_subtilis_subsp._subtilis_str._168 4 4
Bacillus_licheniformis_DSM_13_=_ATCC_14580 4 4
Bacillus_halodurans_C-125 6 6
Bacillus_weihenstephanensis_KBAB4 10 10
Bacillus_thuringiensis_str._Al_Hakam 10 10
Bacillus_cereus_03BB102 10 10
Bacillus_anthracis_str._A0248 9 9
Bacillus_pseudofirmus_OF4 13 13
Bacillus_clausii_KSM-K16 1 1
Bacillus_cellulosilyticus_DSM_2522 21 21
Bacillus_pumilus_SAFR-032 4 4
Bacillus_megaterium_DSM_319 7 7
Bacillus_coagulans_2-6 3 3
Macrococcus_caseolyticus_JCSC5402 1 1
Staphylococcus_pseudintermedius_HKU10-03 1 1
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1 1
Staphylococcus_lugdunensis_HKU09-01 1 1
Staphylococcus_haemolyticus_JCSC1435 1 1
Staphylococcus_epidermidis_RP62A 1 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1 1
Staphylococcus_aureus_subsp._aureus_JH1 1 1
Staphylococcus_aureus 1 1
Candidatus_Cloacamonas_acidaminovorans 6 5
Gemmatimonas_aurantiaca_T-27 14 14
Melioribacter_roseus_P3M 2 2
Ignavibacterium_album_JCM_16511 4 4
Pelodictyon_phaeoclathratiforme_BU-1 1 1
Chlorobium_luteolum_DSM_273 1 1
Chlorobium_chlorochromatii_CaD3 1 1
Chlorobium_phaeobacteroides_DSM_266 2 2
Chlorobium_phaeovibrioides_DSM_265 1 1
Chlorobium_limicola_DSM_245 3 3
Chlorobaculum_parvum_NCIB_8327 2 2
Chlorobium_tepidum_TLS 2 2
Chloroherpeton_thalassium_ATCC_35110 12 12
Prosthecochloris_aestuarii_DSM_271 3 3
Haliscomenobacter_hydrossis_DSM_1100 11 10
Niastella_koreensis_GR20-10 3 3
Rhodothermus_marinus_DSM_4252 2 2
Flexibacter_litoralis_DSM_6794 2 2
Cyclobacterium_marinum_DSM_745 3 3
Fibrella_aestuarina 1 1
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 2 2
Spirosoma_linguale_DSM_74 1 1
Runella_slithyformis_DSM_19594 2 2
Tannerella_forsythia_ATCC_43037 1 1
Bacteroides_salanitronis_DSM_18170 1 1
Pedobacter_saltans_DSM_12145 1 1
Solitalea_canadensis_DSM_3403 3 3
Sphingobacterium_sp._21 2 2
Fluviicola_taffensis_DSM_16823 3 3
Owenweeksia_hongkongensis_DSM_17368 3 3
Zunongwangia_profunda_SM-A87 5 5
Krokinobacter_sp._4H-3-7-5 1 1
Gramella_forsetii_KT0803 3 3
Lacinutrix_sp._5H-3-7-4 1 1
Maribacter_sp._HTCC2170 6 6
Robiginitalea_biformata_HTCC2501 2 2
Aequorivita_sublithincola_DSM_14238 1 1
Flavobacterium_branchiophilum_FL-15 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 27 27
Parachlamydia_acanthamoebae_UV-7 1 1
Simkania_negevensis_Z 4 4
Phycisphaera_mikurensis_NBRC_102666 12 12
Isosphaera_pallida_ATCC_43644 6 6
Planctomyces_brasiliensis_DSM_5305 6 6
Planctomyces_limnophilus_DSM_3776 6 6
Rhodopirellula_baltica_SH_1 13 13
Pirellula_staleyi_DSM_6068 10 9
Coraliomargarita_akajimensis_DSM_45221 2 2
Opitutus_terrae_PB90-1 5 5
Fretibacterium_fastidiosum 4 4
Thermovirga_lienii_DSM_17291 10 10
Aminobacterium_colombiense_DSM_12261 3 3
Thermanaerovibrio_acidaminovorans_DSM_6589 13 13
Anaerobaculum_mobile_DSM_13181 2 2
Turneriella_parva_DSM_21527 60 60
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 15 15
Leptospira_interrogans_serovar_Lai_str._IPAV 35 34
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 37 37
Brachyspira_murdochii_DSM_12563 4 4
Brachyspira_intermedia_PWS/A 4 4
Brachyspira_pilosicoli_95/1000 6 6
Brachyspira_hyodysenteriae_WA1 4 4
Borrelia_garinii_PBi 1 1
Borrelia_bissettii_DN127 1 1
Borrelia_afzelii_PKo 1 1
Borrelia_burgdorferi_B31 1 1
Borrelia_recurrentis_A1 1 1
Borrelia_duttonii_Ly 1 1
Borrelia_crocidurae_str._Achema 1 1
Borrelia_turicatae_91E135 1 1
Borrelia_hermsii_DAH 1 1
Spirochaeta_smaragdinae_DSM_11293 25 25
Sphaerochaeta_pleomorpha_str._Grapes 28 26
Sphaerochaeta_globus_str._Buddy 31 30
Spirochaeta_caldaria_DSM_7334 22 22
Treponema_azotonutricium_ZAS-9 18 18
Treponema_primitia_ZAS-2 15 15
Treponema_brennaborense_DSM_12168 21 20
Treponema_paraluiscuniculi_Cuniculi_A 3 3
Treponema_succinifaciens_DSM_2489 8 8
Treponema_pallidum_subsp._pallidum_SS14 5 5
Treponema_denticola_ATCC_35405 18 18
Spirochaeta_africana_DSM_8902 38 38
Spirochaeta_thermophila_DSM_6192 18 18
Thermodesulfatator_indicus_DSM_15286 6 6
Thermodesulfobacterium_sp._OPB45 13 13
Desulfurispirillum_indicum_S5 22 22
Calditerrivibrio_nitroreducens_DSM_19672 15 15
Denitrovibrio_acetiphilus_DSM_12809 27 27
Deferribacter_desulfuricans_SSM1 20 20
Flexistipes_sinusarabici_DSM_4947 12 12
Marinitoga_piezophila_KA3 15 15
Petrotoga_mobilis_SJ95 5 5
Mesotoga_prima_MesG1.Ag.4.2 16 16
Kosmotoga_olearia_TBF_19.5.1 9 9
Fervidobacterium_pennivorans_DSM_9078 19 19
Fervidobacterium_nodosum_Rt17-B1 19 19
Thermosipho_melanesiensis_BI429 16 16
Thermosipho_africanus_TCF52B 19 19
Thermotoga_lettingae_TMO 10 10
Thermotoga_thermarum_DSM_5069 7 7
Thermotoga_sp._RQ2 11 11
Thermotoga_naphthophila_RKU-10 10 10
Thermotoga_petrophila_RKU-1 11 11
Thermotoga_neapolitana_DSM_4359 10 10
Thermotoga_maritima_MSB8 11 11
Thermovibrio_ammonificans_HB-1 12 12
Desulfurobacterium_thermolithotrophum_DSM_11699 8 8
Sulfurihydrogenibium_sp._YO3AOP1 11 11
Sulfurihydrogenibium_azorense_Az-Fu1 11 11
Persephonella_marina_EX-H1 27 27
Hydrogenobaculum_sp._SN 10 10
Hydrogenobaculum_sp._HO 11 11
Hydrogenobaculum_sp._Y04AAS1 16 16
Thermocrinis_albus_DSM_14484 7 7
Aquifex_aeolicus_VF5 11 11
Hydrogenobacter_thermophilus_TK-6 4 4
Elusimicrobium_minutum_Pei191 2 2
Dictyoglomus_turgidum_DSM_6724 9 9
Dictyoglomus_thermophilum_H-6-12 10 10
Caldisericum_exile_AZM16c01 6 6
Candidatus_Chloracidobacterium_thermophilum_B 8 8
Candidatus_Solibacter_usitatus_Ellin6076 8 8
Granulicella_tundricola_MP5ACTX9 20 20
Granulicella_mallensis_MP5ACTX8 2 2
Candidatus_Koribacter_versatilis_Ellin345 17 17
Terriglobus_saanensis_SP1PR4 24 24
Terriglobus_roseus_DSM_18391 28 28
Acidobacterium_capsulatum_ATCC_51196 18 18
Thermodesulfovibrio_yellowstonii_DSM_11347 8 8
Candidatus_Nitrospira_defluvii 8 8
Leptospirillum_ferrooxidans_C2-3 39 38
Ilyobacter_polytropus_DSM_2926 23 23
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
Candidatus_Methylomirabilis_oxyfera 4 4
Acidithiobacillus_ferrivorans_SS3 16 16
Acidithiobacillus_caldus_SM-1 14 14
Acidithiobacillus_ferrooxidans_ATCC_53993 3 3
Bacteriovorax_marinus_SJ 3 3
Bdellovibrio_bacteriovorus_HD100 9 9
Nautilia_profundicola_AmH 31 31
Nitratifractor_salsuginis_DSM_16511 11 11
Sulfurospirillum_deleyianum_DSM_6946 33 33
Sulfurospirillum_barnesii_SES-3 28 28
Arcobacter_sp._L 45 45
Arcobacter_nitrofigilis_DSM_7299 40 40
Arcobacter_butzleri_RM4018 25 25
Campylobacter_hominis_ATCC_BAA-381 1 1
Campylobacter_lari_RM2100 4 4
Campylobacter_curvus_525.92 11 11
Campylobacter_concisus_13826 10 10
Campylobacter_jejuni_subsp._doylei_269.97 1 1
Campylobacter_sp._03-427 9 9
Campylobacter_fetus_subsp._fetus_82-40 9 9
uncultured_Sulfuricurvum_sp._RIFRC-1 62 62
Sulfuricurvum_kujiense_DSM_16994 82 82
Sulfurimonas_autotrophica_DSM_16294 53 52
Sulfurimonas_denitrificans_DSM_1251 40 39
Wolinella_succinogenes_DSM_1740 22 22
Helicobacter_cetorum_MIT_00-7128 1 1
Helicobacter_hepaticus_ATCC_51449 1 1
Helicobacter_mustelae_12198 2 2
Helicobacter_cinaedi_PAGU611 1 1
Nitratiruptor_sp._SB155-2 34 34
Sulfurovum_sp._NBC37-1 19 19
Desulfarculus_baarsii_DSM_2075 20 19
Desulfobacca_acetoxidans_DSM_11109 11 11
Syntrophus_aciditrophicus_SB 11 11
Desulfomonile_tiedjei_DSM_6799 16 16
Syntrophobacter_fumaroxidans_MPOB 14 14
Desulfurivibrio_alkaliphilus_AHT2 29 29
Desulfotalea_psychrophila_LSv54 25 25
Desulfobulbus_propionicus_DSM_2032 26 26
Desulfatibacillum_alkenivorans_AK-01 34 34
Desulfobacterium_autotrophicum_HRM2 36 36
Desulfococcus_oleovorans_Hxd3 21 21
Desulfohalobium_retbaense_DSM_5692 25 24
Desulfomicrobium_baculatum_DSM_4028 31 30
Desulfovibrio_piezophilus 29 29
Desulfovibrio_aespoeensis_Aspo-2 21 21
Lawsonia_intracellularis_PHE/MN1-00 2 2
Desulfovibrio_magneticus_RS-1 61 61
Desulfovibrio_alaskensis_G20 31 31
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 28 28
Desulfovibrio_salexigens_DSM_2638 37 37
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 18 17
Desulfovibrio_africanus_str._Walvis_Bay 21 21
Hippea_maritima_DSM_10411 21 21
Geobacter_daltonii_FRC-32 21 21
Geobacter_sp._M21 23 23
Geobacter_uraniireducens_Rf4 19 19
Geobacter_lovleyi_SZ 46 45
Geobacter_bemidjiensis_Bem 22 22
Geobacter_sulfurreducens_KN400 30 30
Geobacter_metallireducens_GS-15 22 22
Pelobacter_propionicus_DSM_2379 31 30
Pelobacter_carbinolicus_DSM_2380 37 37
Haliangium_ochraceum_DSM_14365 27 26
Sorangium_cellulosum_'So_ce_56' 35 33
Anaeromyxobacter_sp._Fw109-5 12 12
Anaeromyxobacter_dehalogenans_2CP-1 11 11
Stigmatella_aurantiaca_DW4/3-1 42 41
Corallococcus_coralloides_DSM_2259 37 35
Myxococcus_xanthus_DK_1622 33 32
Myxococcus_fulvus_HW-1 35 34
Dechloromonas_aromatica_RCB 62 62
Thauera_sp._MZ1T 36 36
Azoarcus_sp._KH32C 78 78
Azoarcus_sp._BH72 54 54
Aromatoleum_aromaticum_EbN1 28 28
Dechlorosoma_suillum_PS 60 60
Pseudogulbenkiania_sp._NH8B 36 36
Laribacter_hongkongensis_HLHK9 28 28
Chromobacterium_violaceum_ATCC_12472 43 43
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 42 42
beta_proteobacterium_CB 9 9
Methylibium_petroleiphilum_PM1 23 23
Thiomonas_arsenitoxydans 32 31
Thiomonas_intermedia_K12 25 25
Rubrivivax_gelatinosus_IL144 41 40
Leptothrix_cholodnii_SP-6 47 47
Burkholderia_rhizoxinica_HKI_454 1 1
Burkholderia_phytofirmans_PsJN 34 34
Burkholderia_phymatum_STM815 41 41
Burkholderia_xenovorans_LB400 33 33
Ralstonia_eutropha_JMP134 35 35
Cupriavidus_taiwanensis_LMG_19424 21 21
Cupriavidus_metallidurans_CH34 31 31
Cupriavidus_necator_N-1 36 36
Ralstonia_eutropha_H16 30 30
Ralstonia_pickettii_12D 28 28
Ralstonia_solanacearum_CFBP2957 23 23
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 3 3
Burkholderia_sp._RPE64 24 24
Burkholderia_sp._CCGE1002 35 35
Burkholderia_thailandensis_E264 11 11
Burkholderia_pseudomallei_1106a 12 12
Burkholderia_mallei_SAVP1 9 9
Burkholderia_ambifaria_AMMD 22 22
Burkholderia_cenocepacia_HI2424 19 19
Burkholderia_multivorans_ATCC_17616 16 16
Burkholderia_vietnamiensis_G4 31 31
Burkholderia_gladioli_BSR3 20 20
Burkholderia_glumae_BGR1 17 17
Verminephrobacter_eiseniae_EF01-2 8 8
Alicycliphilus_denitrificans_K601 26 26
Ramlibacter_tataouinensis_TTB310 10 10
Delftia_sp._Cs1-4 45 45
Delftia_acidovorans_SPH-1 43 43
Polaromonas_sp._JS666 10 10
Polaromonas_naphthalenivorans_CJ2 3 3
Variovorax_paradoxus_S110 14 14
Rhodoferax_ferrireducens_T118 56 56
Acidovorax_ebreus_TPSY 26 26
Acidovorax_sp._KKS102 68 68
Acidovorax_sp._JS42 22 22
Acidovorax_citrulli_AAC00-1 44 43
Acidovorax_avenae_subsp._avenae_ATCC_19860 52 51
Comamonas_testosteroni_CNB-2 43 43
Herminiimonas_arsenicoxydans 34 34
Collimonas_fungivorans_Ter331 13 13
Janthinobacterium_sp._Marseille 35 35
Herbaspirillum_seropedicae_SmR1 43 43
Pusillimonas_sp._T7-7 1 1
Bordetella_petrii_DSM_12804 3 3
Bordetella_avium_197N 14 14
Bordetella_pertussis_Tohama_I 7 7
Bordetella_parapertussis_12822 13 13
Bordetella_bronchiseptica_RB50 16 16
Achromobacter_xylosoxidans_A8 29 29
Achromobacter_xylosoxidans 25 25
Thiobacillus_denitrificans_ATCC_25259 33 33
Nitrosospira_multiformis_ATCC_25196 17 17
Nitrosomonas_sp._Is79A3 32 32
Nitrosomonas_eutropha_C91 9 9
Nitrosomonas_europaea_ATCC_19718 10 9
Sideroxydans_lithotrophicus_ES-1 59 59
Gallionella_capsiferriformans_ES-2 63 63
Methylotenera_versatilis_301 49 49
Methylotenera_mobilis_JLW8 42 42
Methylovorus_sp._MP688 39 39
Methylovorus_glucosetrophus_SIP3-4 41 41
Methylobacillus_flagellatus_KT 24 24
Magnetococcus_marinus_MC-1 56 56
Parvularcula_bermudensis_HTCC2503 6 6
Asticcacaulis_excentricus_CB_48 12 12
Brevundimonas_subvibrioides_ATCC_15264 7 7
Caulobacter_sp._K31 9 9
Caulobacter_crescentus_NA1000 15 14
Caulobacter_segnis_ATCC_21756 10 10
Phenylobacterium_zucineum_HLK1 8 8
Erythrobacter_litoralis_HTCC2594 10 10
Sphingopyxis_alaskensis_RB2256 13 13
Novosphingobium_sp._PP1Y 25 25
Novosphingobium_aromaticivorans_DSM_12444 10 10
Sphingobium_sp._SYK-6 10 10
Sphingobium_japonicum_UT26S 18 18
Sphingobium_chlorophenolicum_L-1 15 15
Sphingomonas_sp._MM-1 15 15
Sphingomonas_wittichii_RW1 21 21
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 3 3
Maricaulis_maris_MCS10 13 13
Hirschia_baltica_ATCC_49814 10 10
Hyphomonas_neptunium_ATCC_15444 18 18
Dinoroseobacter_shibae_DFL_12 3 3
Phaeobacter_gallaeciensis_2.10 12 12
Pseudovibrio_sp._FO-BEG1 16 16
Jannaschia_sp._CCS1 12 12
Ruegeria_sp._TM1040 18 18
Ruegeria_pomeroyi_DSS-3 16 16
Ketogulonicigenium_vulgare_Y25 4 4
Ketogulonigenium_vulgarum_WSH-001 4 4
Roseobacter_litoralis_Och_149 13 13
Roseobacter_denitrificans_OCh_114 11 11
Rhodobacter_sphaeroides_ATCC_17029 13 13
Rhodobacter_capsulatus_SB_1003 19 19
Paracoccus_denitrificans_PD1222 3 3
Rhodospirillum_photometricum_DSM_122 39 39
Tistrella_mobilis_KA081020-065 30 30
Magnetospirillum_magneticum_AMB-1 53 53
Rhodospirillum_centenum_SW 19 19
Rhodospirillum_rubrum_F11 37 37
Azospirillum_lipoferum_4B 39 39
Azospirillum_sp._B510 40 40
Azospirillum_brasilense_Sp245 42 42
Gluconacetobacter_xylinus_NBRC_3288 14 14
Granulibacter_bethesdensis_CGDNIH1 1 1
Gluconacetobacter_diazotrophicus_PAl_5 18 18
Acidiphilium_multivorum_AIU301 17 17
Acidiphilium_cryptum_JF-5 15 15
Gluconobacter_oxydans_621H 7 7
Acetobacter_pasteurianus_IFO_3283-01 1 1
Polymorphum_gilvum_SL003B-26A1 32 32
Micavibrio_aeruginosavorus_ARL-13 10 9
Candidatus_Puniceispirillum_marinum_IMCC1322 2 2
Neorickettsia_sennetsu_str._Miyayama 1 1
Neorickettsia_risticii_str._Illinois 1 1
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 1 1
Wolbachia_sp._wRi 1 1
Ehrlichia_chaffeensis_str._Arkansas 2 2
Ehrlichia_canis_str._Jake 2 2
Ehrlichia_ruminantium_str._Gardel 2 2
Anaplasma_phagocytophilum_HZ 2 2
Anaplasma_marginale_str._Florida 1 1
Anaplasma_centrale_str._Israel 1 1
Orientia_tsutsugamushi_str._Boryong 1 1
Rickettsia_bellii_OSU_85-389 1 1
Rickettsia_canadensis_str._McKiel 1 1
Rickettsia_typhi_str._Wilmington 1 1
Rickettsia_prowazekii_str._BuV67-CWPP 1 1
Rickettsia_philipii_str._364D 1 1
Rickettsia_heilongjiangensis_054 1 1
Rickettsia_peacockii_str._Rustic 1 1
Rickettsia_felis_URRWXCal2 1 1
Rickettsia_slovaca_13-B 1 1
Rickettsia_parkeri_str._Portsmouth 1 1
Rickettsia_massiliae_MTU5 1 1
Rickettsia_japonica_YH 1 1
Rickettsia_africae_ESF-5 1 1
Rickettsia_rhipicephali_str._3-7-female6-CWPP 1 1
Rickettsia_montanensis_str._OSU_85-930 1 1
Candidatus_Rickettsia_amblyommii_str._GAT-30V 1 1
Rickettsia_australis_str._Cutlack 1 1
Rickettsia_akari_str._Hartford 1 1
Rickettsia_conorii_str._Malish_7 1 1
Starkeya_novella_DSM_506 23 23
Xanthobacter_autotrophicus_Py2 19 19
Azorhizobium_caulinodans_ORS_571 35 35
Methylobacterium_chloromethanicum_CM4 44 42
Methylobacterium_extorquens_AM1 38 37
Methylobacterium_sp._4-46 51 51
Methylobacterium_populi_BJ001 38 37
Methylobacterium_nodulans_ORS_2060 29 29
Methylobacterium_radiotolerans_JCM_2831 45 45
Parvibaculum_lavamentivorans_DS-1 8 8
Ochrobactrum_anthropi_ATCC_49188 19 19
Brucella_microti_CCM_4915 9 9
Brucella_pinnipedialis_B2/94 9 9
Brucella_canis_ATCC_23365 9 9
Brucella_suis_ATCC_23445 9 9
Brucella_melitensis_ATCC_23457 8 8
Brucella_ovis_ATCC_25840 7 7
Brucella_abortus_S19 7 7
Sinorhizobium_fredii_NGR234 61 61
Sinorhizobium_medicae_WSM419 44 44
Sinorhizobium_meliloti_AK83 44 44
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 31 31
Rhizobium_etli_CIAT_652 62 62
Rhizobium_leguminosarum_bv._viciae_3841 67 67
Agrobacterium_tumefaciens_str._C58 31 31
Agrobacterium_radiobacter_K84 36 36
Agrobacterium_sp._H13-3 35 35
Agrobacterium_vitis_S4 35 35
Candidatus_Liberibacter_asiaticus_str._psy62 2 2
Mesorhizobium_sp._BNC1 11 11
Mesorhizobium_opportunistum_WSM2075 27 27
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 25 25
Mesorhizobium_loti_MAFF303099 45 45
Methylocella_silvestris_BL2 12 12
Beijerinckia_indica_subsp._indica_ATCC_9039 3 3
Pelagibacterium_halotolerans_B2 20 20
Rhodomicrobium_vannielii_ATCC_17100 2 2
Hyphomicrobium_sp._MC1 17 17
Hyphomicrobium_denitrificans_ATCC_51888 9 9
Oligotropha_carboxidovorans_OM4 21 21
Rhodopseudomonas_palustris_BisA53 43 42
Nitrobacter_winogradskyi_Nb-255 10 10
Nitrobacter_hamburgensis_X14 12 12
Bradyrhizobium_japonicum_USDA_110 73 72
Bradyrhizobium_sp._ORS_278 45 45
Methylocystis_sp._SC2 10 10
Bartonella_tribocorum_CIP_105476 1 1
Bartonella_clarridgeiae_73 1 1
Bartonella_henselae_str._Houston-1 1 1
Bartonella_grahamii_as4aup 1 1
Bartonella_quintana_str._Toulouse 1 1
Bartonella_bacilliformis_KC583 1 1
Saccharophagus_degradans_2-40 45 45
Teredinibacter_turnerae_T7901 39 39
Cellvibrio_japonicus_Ueda107 45 45
Oceanimonas_sp._GK1 30 30
Tolumonas_auensis_DSM_9187 21 21
Aeromonas_veronii_B565 47 47
Aeromonas_salmonicida_subsp._salmonicida_A449 41 41
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 45 45
Aliivibrio_salmonicida_LFI1238 32 32
Vibrio_fischeri_MJ11 41 41
Vibrio_sp._Ex25 45 45
Vibrio_harveyi_ATCC_BAA-1116 43 43
Vibrio_parahaemolyticus_RIMD_2210633 44 44
Vibrio_splendidus_LGP32 48 48
Vibrio_anguillarum_775 35 35
Vibrio_furnissii_NCTC_11218 53 53
Vibrio_vulnificus_MO6-24/O 63 63
Vibrio_cholerae_O395 41 41
Photobacterium_profundum_SS9 31 31
Psychromonas_ingrahamii_37 56 56
Psychromonas_sp._CNPT3 12 12
Idiomarina_loihiensis_L2TR 32 32
Ferrimonas_balearica_DSM_9799 28 28
Shewanella_piezotolerans_WP3 46 46
Shewanella_loihica_PV-4 55 55
Shewanella_halifaxensis_HAW-EB4 50 50
Shewanella_sediminis_HAW-EB3 76 76
Shewanella_denitrificans_OS217 58 58
Shewanella_pealeana_ATCC_700345 49 49
Shewanella_oneidensis_MR-1 53 53
Shewanella_baltica_OS185 61 61
Shewanella_woodyi_ATCC_51908 68 68
Shewanella_sp._MR-4 60 60
Shewanella_amazonensis_SB2B 69 69
Shewanella_violacea_DSS12 40 40
Shewanella_frigidimarina_NCIMB_400 65 65
Shewanella_putrefaciens_CN-32 44 44
Colwellia_psychrerythraea_34H 61 61
Pseudoalteromonas_sp._SM9913 55 55
Pseudoalteromonas_atlantica_T6c 62 62
Pseudoalteromonas_haloplanktis_TAC125 38 38
Glaciecola_sp._4H-3-7+YE-5 67 67
Glaciecola_nitratireducens_FR1064 79 79
Marinobacter_adhaerens_HP15 64 64
Marinobacter_sp._BSs20148 46 46
Marinobacter_hydrocarbonoclasticus_ATCC_49840 53 53
Marinobacter_aquaeolei_VT8 50 50
Alteromonas_sp._SN2 63 63
Alteromonas_macleodii_str._'Deep_ecotype' 49 49
Kangiella_koreensis_DSM_16069 35 35
Hahella_chejuensis_KCTC_2396 69 69
Alcanivorax_borkumensis_SK2 15 15
Marinomonas_posidonica_IVIA-Po-181 44 44
Marinomonas_sp._MWYL1 58 58
Marinomonas_mediterranea_MMB-1 63 63
Chromohalobacter_salexigens_DSM_3043 21 21
Halomonas_elongata_DSM_2581 6 6
Methylomicrobium_alcaliphilum 54 54
Methylomonas_methanica_MC09 62 62
Methylococcus_capsulatus_str._Bath 16 16
Dichelobacter_nodosus_VCS1703A 1 1
Rhodanobacter_denitrificans 27 27
Frateuria_aurantia_DSM_6220 18 18
Pseudoxanthomonas_spadix_BD-a59 19 19
Pseudoxanthomonas_suwonensis_11-1 22 22
Stenotrophomonas_maltophilia_K279a 29 29
Xylella_fastidiosa_M23 3 3
Xanthomonas_axonopodis_pv._citri_str._306 32 32
Xanthomonas_albilineans_GPE_PC73 24 24
Xanthomonas_oryzae_pv._oryzae_PXO99A 26 26
Xanthomonas_campestris_pv._campestris_str._B100 30 30
Halothiobacillus_neapolitanus_c2 22 22
Spiribacter_sp._UAH-SP71 13 13
Alkalilimnicola_ehrlichii_MLHE-1 42 42
Thioalkalivibrio_sulfidophilus_HL-EbGr7 49 48
Thioalkalivibrio_sp._K90mix 44 43
Halorhodospira_halophila_SL1 21 21
Allochromatium_vinosum_DSM_180 40 40
Thiocystis_violascens_DSM_198 49 49
Nitrosococcus_watsonii_C-113 14 14
Nitrosococcus_halophilus_Nc4 16 16
Nitrosococcus_oceani_ATCC_19707 15 15
Coxiella_burnetii_Dugway_5J108-111 3 3
Legionella_longbeachae_NSW150 24 24
Legionella_pneumophila_str._Corby 26 26
gamma_proteobacterium_HdN1 46 46
Xenorhabdus_nematophila_ATCC_19061 1 1
Providencia_stuartii_MRSN_2154 2 2
Proteus_mirabilis_HI4320 1 1
Edwardsiella_ictaluri_93-146 6 6
Edwardsiella_tarda_EIB202 12 12
Rahnella_sp._Y9602 19 19
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 17 17
Yersinia_pseudotuberculosis_IP_31758 6 6
Yersinia_pestis_Pestoides_F 5 5
Yersinia_enterocolitica_subsp._enterocolitica_8081 15 15
Serratia_sp._AS12 15 15
Serratia_sp._ATCC_39006 10 10
Serratia_plymuthica_AS9 15 15
Serratia_proteamaculans_568 15 15
Dickeya_dadantii_Ech703 20 20
Dickeya_zeae_Ech1591 13 13
Pectobacterium_wasabiae_WPP163 17 17
Pectobacterium_sp._SCC3193 17 17
Pectobacterium_atrosepticum_SCRI1043 17 17
Pectobacterium_carotovorum_subsp._carotovorum_PC1 18 18
Sodalis_glossinidius_str._'morsitans' 2 2
Pantoea_sp._At-9b 27 27
Pantoea_vagans_C9-1 30 30
Pantoea_ananatis_LMG_20103 21 21
Erwinia_tasmaniensis_Et1/99 9 9
Erwinia_sp._Ejp617 6 6
Erwinia_billingiae_Eb661 25 25
Erwinia_pyrifoliae_Ep1/96 7 7
Erwinia_amylovora_ATCC_49946 7 7
Escherichia_blattae_DSM_4481 13 13
Cronobacter_turicensis_z3032 18 18
Cronobacter_sakazakii_ES15 19 19
Enterobacteriaceae_bacterium_strain_FGI_57 20 20
Shigella_sonnei_Ss046 14 14
Shigella_flexneri_5_str._8401 11 11
Shigella_dysenteriae_Sd197 11 11
Shigella_boydii_CDC_3083-94 12 12
Salmonella_bongori_NCTC_12419 11 11
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 10 10
Klebsiella_oxytoca_E718 18 18
Klebsiella_variicola_At-22 20 20
Klebsiella_pneumoniae_NTUH-K2044 17 17
Enterobacter_aerogenes_KCTC_2190 19 19
Escherichia_fergusonii_ATCC_35469 20 20
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 18 18
Enterobacter_sp._R4-368 32 32
Enterobacter_sp._638 25 25
Enterobacter_asburiae_LF7a 27 27
Enterobacter_cloacae_subsp._dissolvens_SDM 24 24
Citrobacter_rodentium_ICC168 14 14
Citrobacter_koseri_ATCC_BAA-895 16 16
Azotobacter_vinelandii_DJ 25 24
Pseudomonas_sp._TKP 35 35
Pseudomonas_sp._UW4 40 40
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 42 42
Pseudomonas_entomophila_L48 38 38
Pseudomonas_syringae_pv._tomato_str._DC3000 35 35
Pseudomonas_stutzeri_A1501 35 35
Pseudomonas_fulva_12-X 40 40
Pseudomonas_putida_F1 35 35
Pseudomonas_protegens_Pf-5 38 38
Pseudomonas_fluorescens_SBW25 38 38
Pseudomonas_mendocina_ymp 49 49
Pseudomonas_aeruginosa_UCBPP-PA14 33 33
Pseudomonas_sp._VLB120 36 36
Psychrobacter_sp._G 4 4
Psychrobacter_arcticus_273-4 1 1
Psychrobacter_cryohalolentis_K5 4 4
Acinetobacter_oleivorans_DR1 11 11
Acinetobacter_calcoaceticus_PHEA-2 11 11
Acinetobacter_baumannii_ATCC_17978 12 12
Acinetobacter_sp._ADP1 11 11
Methylophaga_sp._JAM1 42 41
Cycloclasticus_sp._P1 24 24
Thiomicrospira_crunogena_XCL-2 41 41
Thioalkalimicrobium_cyclicum_ALM1 1 1
Francisella_novicida_U112 2 2
Cenarchaeum_symbiosum_A 3 3
Candidatus_Nitrosopumilus_sp._AR2 8 8
Nitrosopumilus_maritimus_SCM1 4 4
Pyrobaculum_sp._1860 2 2
Pyrobaculum_aerophilum_str._IM2 1 1
Thermoproteus_uzoniensis_768-20 1 1
Thermoproteus_tenax_Kra_1 1 1
Methanocella_arvoryzae_MRE50 1 1
Methanosarcina_acetivorans_C2A 1 1
Methanopyrus_kandleri_AV19 2 2
Acholeplasma_laidlawii_PG-8A 14 14

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   38 27
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   57 42
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   31 23
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   25 21
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   50 46
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H143 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 1 1
Candida_albicans_WO-1_ 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 11 9
Batrachochytrium_dendrobatidis_JAM81_ 11 8
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   17 17
Trypanosoma_brucei_Lister_427_v4.1 71 70
Neospora_caninum_Nc-Liverpool_6.2 7 5
Plasmodium_falciparum_HB3_ 7 4
Plasmodium_falciparum_Dd2_ 6 3
Chroococcidiopsis_thermalis_PCC_7203 21 21
Chamaesiphon_minutus_PCC_6605 4 4
Synechocystis_sp._PCC_6803_substr._PCC-P 26 25
Synechocystis_sp._PCC_6803_substr._PCC-N 26 25
Synechocystis_sp._PCC_6803_substr._GT-I 26 25
Synechocystis_sp._PCC_6803 26 25
Cyanobium_gracile_PCC_6307 19 19
Dactylococcopsis_salina_PCC_8305 3 3
Synechococcus_sp._JA-2-3B'a(2-13) 6 6
Synechococcus_sp._JA-3-3Ab 4 4
Synechococcus_sp._CC9605 1 1
Synechococcus_sp._WH_7803 1 1
Synechococcus_sp._PCC_7002 14 14
Synechococcus_elongatus_PCC_6301 19 19
Prochlorococcus_marinus_str._MIT_9313 2 2
Prochlorococcus_marinus_str._MIT_9303 2 2
Crinalium_epipsammum_PCC_9333 18 18
Oscillatoria_nigro-viridis_PCC_7112 58 56
Oscillatoria_acuminata_PCC_6304 62 62
Arthrospira_platensis_NIES-39 55 55
Cyanothece_sp._PCC_7822 41 40
Cyanothece_sp._PCC_7425 24 24
Cyanothece_sp._PCC_7424 36 35
Cyanothece_sp._ATCC_51142 35 34
Cyanothece_sp._PCC_8801 25 25
Cyanobacterium_aponinum_PCC_10605 27 27
Cyanobacterium_stanieri_PCC_7202 14 13
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 4 4
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 20 20
Stanieria_cyanosphaera_PCC_7437 24 23
Calothrix_parietina_Calothrix_sp._PCC_6303 12 12
Cylindrospermum_stagnale_PCC_7417 22 22
Anabaena_cylindrica_PCC_7122 30 30
Spiroplasma_syrphidicola_EA-1 1 1
Mycoplasma_fermentans_JER 1 1
Mycoplasma_fermentans_PG18 1 1
Gordonibacter_pamelaeae_7-10-1-b 19 16
Adlercreutzia_equolifaciens_DSM_19450 3 3
Frankia_sp._EuI1c 35 34
Frankia_sp._CcI3 19 16
Nocardiopsis_alba_ATCC_BAA-2165 4 4
Streptomyces_albus_J1074 9 9
Streptomyces_rapamycinicus_NRRL_5491 12 12
Streptomyces_davawensis_JCM_4913 9 9
Streptomyces_fulvissimus_DSM_40593 11 11
Streptomyces_venezuelae_ATCC_10712 11 11
Streptomyces_collinus_Tu_365 8 8
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 7 7
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 9 9
Saccharothrix_espanaensis_DSM_44229 32 32
Amycolatopsis_mediterranei_RB 28 28
Amycolatopsis_mediterranei_S699 28 28
Amycolatopsis_mediterranei_S699 28 28
Amycolatopsis_orientalis_HCCB10007 23 23
Actinoplanes_friuliensis_DSM_7358 83 83
Rhodococcus_pyridinivorans_SB3094 5 5
Rhodococcus_erythropolis_CCM2595 22 22
Nocardia_brasiliensis_ATCC_700358 20 20
Mycobacterium_sp._MOTT36Y 22 21
Mycobacterium_sp._JDM601 12 12
Mycobacterium_abscessus_subsp._bolletii_50594 10 10
Mycobacterium_liflandii_128FXT 20 20
Mycobacterium_sp._KMS 26 26
Mycobacterium_sp._MCS 23 23
Mycobacterium_yongonense_05-1390 20 19
Mycobacterium_intracellulare_MOTT-64 21 20
Mycobacterium_indicus_pranii_MTCC_9506 22 21
Mycobacterium_intracellulare_MOTT-02 22 21
Mycobacterium_avium_subsp._paratuberculosis_MAP4 15 15
Mycobacterium_avium_subsp._paratuberculosis_K-10 17 17
Mycobacterium_canettii_CIPT_140070017 17 17
Mycobacterium_canettii_CIPT_140060008 18 18
Mycobacterium_canettii_CIPT_140070008 18 18
Mycobacterium_canettii_CIPT_140070010 18 18
Mycobacterium_tuberculosis_EAI5/NITR206 16 16
Mycobacterium_tuberculosis_EAI5 15 15
Mycobacterium_tuberculosis_CAS/NITR204 11 11
Mycobacterium_tuberculosis_str._Beijing/NITR203 17 17
Mycobacterium_tuberculosis_UT205 16 16
Mycobacterium_tuberculosis_RGTB423 11 11
Mycobacterium_tuberculosis_RGTB327 11 11
Mycobacterium_tuberculosis_CTRI-2 17 17
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 17 17
Mycobacterium_tuberculosis_KZN_605 17 17
Mycobacterium_tuberculosis_KZN_4207 18 18
Mycobacterium_tuberculosis_CCDC5180 18 18
Mycobacterium_tuberculosis_CCDC5079 18 18
Mycobacterium_tuberculosis_CCDC5079 18 18
Mycobacterium_tuberculosis_H37Ra 17 17
Mycobacterium_tuberculosis_str._Haarlem/NITR202 10 10
Mycobacterium_tuberculosis_str._Haarlem 18 18
Mycobacterium_tuberculosis_F11 18 18
Mycobacterium_tuberculosis_H37Rv 17 17
Mycobacterium_tuberculosis_CDC1551 19 19
Mycobacterium_bovis_AF2122/97 17 17
Mycobacterium_bovis_BCG_str._Korea_1168P 17 17
Mycobacterium_bovis_BCG_str._Mexico 17 17
Mycobacterium_bovis_BCG_str._Tokyo_172 17 17
Mycobacterium_gilvum_Spyr1 34 34
Mycobacterium_smegmatis_str._MC2_155 11 11
Mycobacterium_leprae_TN 7 7
Mycobacterium_kansasii_ATCC_12478 26 25
Corynebacterium_maris_DSM_45190 2 2
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Corynebacterium_ulcerans_BR-AD22 1 1
Corynebacterium_ulcerans_809 1 1
Corynebacterium_urealyticum_DSM_7111 1 1
Corynebacterium_argentoratense_DSM_44202 1 1
Corynebacterium_callunae_DSM_20147 1 1
Corynebacterium_pseudotuberculosis_258 1 1
Corynebacterium_pseudotuberculosis_Cp162 1 1
Corynebacterium_pseudotuberculosis_P54B96 1 1
Corynebacterium_pseudotuberculosis_267 1 1
Corynebacterium_pseudotuberculosis_1/06-A 1 1
Corynebacterium_pseudotuberculosis_42/02-A 1 1
Corynebacterium_pseudotuberculosis_3/99-5 1 1
Corynebacterium_pseudotuberculosis_31 1 1
Corynebacterium_pseudotuberculosis_CIP_52.97 1 1
Corynebacterium_pseudotuberculosis_PAT10 1 1
Corynebacterium_pseudotuberculosis_I19 1 1
Corynebacterium_pseudotuberculosis_FRC41 1 1
Corynebacterium_pseudotuberculosis_C231 1 1
Corynebacterium_pseudotuberculosis_1002 1 1
Corynebacterium_glutamicum_MB001 2 2
Corynebacterium_glutamicum_SCgG2 2 2
Corynebacterium_glutamicum_SCgG1 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_diphtheriae_BH8 1 1
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_VA01 1 1
Corynebacterium_diphtheriae_HC04 1 1
Corynebacterium_diphtheriae_HC03 1 1
Corynebacterium_diphtheriae_HC02 1 1
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Corynebacterium_diphtheriae_CDCE_8392 1 1
Corynebacterium_diphtheriae_PW8 1 1
Corynebacterium_diphtheriae_C7_(beta) 1 1
Corynebacterium_diphtheriae_31A 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_thermophilum_RBL67 1 1
Bifidobacterium_breve_UCC2003 2 2
Actinomyces_graevenitzii_C83_ 1 1
Actinomyces_odontolyticus_ATCC_17982 1 1
Actinomyces_viscosus_C505 1 1
Dehalococcoides_mccartyi_GY50 1 1
Dehalococcoides_mccartyi_DCMB5 1 1
Dehalococcoides_mccartyi_BTF08 1 1
Dehalococcoides_sp._GT 1 1
Dehalococcoides_sp._VS 1 1
Dehalococcoides_sp._CBDB1 1 1
Chthonomonas_calidirosea_T49 14 14
Deinococcus_peraridilitoris_DSM_19664 32 32
Thermus_oshimai_JL-2 8 8
Thermus_thermophilus_JL-18 6 6
Thermus_thermophilus_SG0.5JP17-16 6 6
Thermus_thermophilus_HB8 4 4
Eubacterium_siraeum_V10Sc8a 11 10
Clostridium_thermocellum_DSM_1313 9 9
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 5 5
Faecalibacterium_prausnitzii_L2-6 6 6
Ruminococcus_champanellensis_18P13 8 8
Sulfobacillus_acidophilus_TPY 11 11
Clostridium_acidurici_9a 10 10
Desulfosporosinus_meridiei_DSM_13257 21 21
Desulfitobacterium_dichloroeliminans_LMG_P-21439 15 15
Desulfitobacterium_hafniense_DCB-2 18 18
Desulfotomaculum_gibsoniae_DSM_7213 7 7
Clostridium_difficile_BI1 30 29
Clostridium_difficile_R20291 31 30
Clostridium_difficile_CD196 31 30
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 7 6
Coprococcus_catus_GD/7 12 11
Roseburia_intestinalis_XB6B4 23 22
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1 1
Clostridium_sp._SY8519 2 1
Clostridium_saccharobutylicum_DSM_13864 17 16
Clostridium_autoethanogenum_DSM_10061 18 18
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 23 23
Clostridium_kluyveri_NBRC_12016 10 10
Clostridium_tetani_genome_12124569 6 6
Clostridium_perfringens_SM101 6 6
Clostridium_perfringens_str._13 6 6
Clostridium_pasteurianum_BC1 5 5
Clostridium_botulinum_H04402_065 9 9
Clostridium_botulinum_BKT015925 5 5
Clostridium_botulinum_F_str._230613 6 6
Clostridium_botulinum_F_str._Langeland 9 9
Clostridium_botulinum_E3_str._Alaska_E43 16 14
Clostridium_botulinum_B1_str._Okra 9 9
Clostridium_botulinum_Ba4_str._657 8 8
Clostridium_botulinum_A2_str._Kyoto 9 9
Clostridium_botulinum_A3_str._Loch_Maree 10 10
Clostridium_botulinum_A_str._Hall 9 9
Clostridium_botulinum_A_str._ATCC_19397 9 9
Clostridium_acetobutylicum_DSM_1731 10 10
Clostridium_acetobutylicum_EA_2018 10 10
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 4 4
Thermoanaerobacterium_thermosaccharolyticum_M0795 3 3
Thermacetogenium_phaeum_DSM_12270 6 6
Thermoanaerobacter_sp._X513 4 4
Halobacteroides_halobius_DSM_5150 6 6
Carnobacterium_maltaromaticum_LMA28 7 7
Enterococcus_casseliflavus_EC20 3 3
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_W56 1 1
Lactobacillus_casei_LC2W 1 1
Lactobacillus_casei_BD-II 1 1
Lactobacillus_casei_BL23 1 1
Lactobacillus_casei_str._Zhang 1 1
Lactobacillus_rhamnosus_LOCK908 3 3
Lactobacillus_rhamnosus_LOCK900 3 3
Lactobacillus_rhamnosus_ATCC_8530 3 3
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_salivarius_UCC118 2 2
Lactobacillus_reuteri_TD1 1 1
Lactobacillus_reuteri_I5007 1 1
Lactobacillus_reuteri_JCM_1112 1 1
Lactobacillus_plantarum_16 4 4
Lactobacillus_plantarum_ZJ316 4 4
Lactobacillus_plantarum_subsp._plantarum_ST-III 5 5
Lactobacillus_plantarum_subsp._plantarum_P-8 4 4
Lactobacillus_plantarum_WCFS1 4 4
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 5 5
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 3 3
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 8 8
Lactobacillus_brevis_KB290 2 2
Lactobacillus_acidophilus_La-14 1 1
Lactobacillus_acidophilus_NCFM 1 1
Pediococcus_pentosaceus_SL4 2 2
Lactococcus_garvieae_Lg2 2 2
Lactococcus_lactis_subsp._lactis_KF147 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 1 1
Streptococcus_lutetiensis_033 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1 1
Streptococcus_salivarius_JIM8777 1 1
Exiguobacterium_antarcticum_B7 22 22
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 10 9
Thermobacillus_composti_KWC4 12 12
Paenibacillus_sp._Y412MC10 13 13
Paenibacillus_mucilaginosus_KNP414 42 41
Paenibacillus_mucilaginosus_K02 42 41
Paenibacillus_larvae_subsp._larvae_DSM_25430 4 4
Paenibacillus_polymyxa_CR1 8 8
Paenibacillus_polymyxa_SC2 9 9
Paenibacillus_polymyxa_E681 9 9
Listeria_monocytogenes_EGD_sequence 4 4
Listeria_monocytogenes_N53-1 4 4
Listeria_monocytogenes_La111 4 4
Listeria_monocytogenes_serotype_4b_str._LL195 4 4
Listeria_monocytogenes_07PF0776 4 4
Listeria_monocytogenes_M7 4 4
Listeria_monocytogenes_J1-220 4 4
Listeria_monocytogenes_J1816 4 4
Listeria_monocytogenes_SLCC2376 4 4
Listeria_monocytogenes_SLCC5850 4 4
Listeria_monocytogenes_ATCC_19117 4 4
Listeria_monocytogenes_L312 4 4
Listeria_monocytogenes_SLCC2479 4 4
Listeria_monocytogenes_SLCC7179 4 4
Listeria_monocytogenes_SLCC2540 4 4
Listeria_monocytogenes_SLCC2378 4 4
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 4 4
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 4 4
Listeria_monocytogenes_serotype_7_str._SLCC2482 4 4
Listeria_monocytogenes_08-5578 4 4
Listeria_monocytogenes_08-5923 4 4
Listeria_monocytogenes_L99 4 4
Listeria_monocytogenes_HCC23 4 4
Listeria_monocytogenes_10403S 4 4
Listeria_monocytogenes_J0161 4 4
Listeria_monocytogenes_Finland_1998 4 4
Listeria_monocytogenes_FSL_R2-561 4 4
Listeria_monocytogenes_serotype_4b_str._F2365 4 4
Listeria_monocytogenes_EGD-e 4 4
Geobacillus_sp._C56-T3 8 8
Geobacillus_sp._Y4.1MC1 8 8
Geobacillus_sp._Y412MC52 9 9
Geobacillus_sp._Y412MC61 8 8
Amphibacillus_xylanus_NBRC_15112 8 8
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 3 3
Bacillus_amyloliquefaciens_LFB112 3 3
Bacillus_amyloliquefaciens_CC178 3 3
Bacillus_amyloliquefaciens_Y2 3 3
Bacillus_amyloliquefaciens_IT-45 3 3
Bacillus_amyloliquefaciens_XH7 5 5
Bacillus_amyloliquefaciens_LL3 4 4
Bacillus_amyloliquefaciens_TA208 5 5
Bacillus_amyloliquefaciens_DSM_7 4 4
Bacillus_licheniformis_9945A 4 4
Bacillus_subtilis_PY79 3 3
Bacillus_subtilis_XF-1 4 4
Bacillus_subtilis_QB928 4 4
Bacillus_subtilis_BSn5 4 4
Bacillus_subtilis_subsp._subtilis_str._BAB-1 4 4
Bacillus_subtilis_subsp._subtilis_str._BSP1 4 4
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 4 4
Bacillus_subtilis_subsp._subtilis_6051-HGW 4 4
Bacillus_subtilis_subsp._spizizenii_TU-B-10 4 4
Bacillus_subtilis_subsp._spizizenii_str._W23 4 4
Bacillus_subtilis_subsp._natto_BEST195 3 3
Bacillus_licheniformis_DSM_13_=_ATCC_14580 4 4
Bacillus_infantis_NRRL_B-14911 17 17
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 4 4
Bacillus_toyonensis_BCT-7112 10 10
Bacillus_thuringiensis_HD-771 10 10
Bacillus_thuringiensis_HD-789 10 10
Bacillus_thuringiensis_MC28 10 10
Bacillus_thuringiensis_serovar_chinensis_CT-43 10 10
Bacillus_thuringiensis_YBT-1518 10 10
Bacillus_thuringiensis_Bt407 10 10
Bacillus_thuringiensis_serovar_konkukian_str._97-27 10 10
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 10 10
Bacillus_thuringiensis_BMB171 12 12
Bacillus_thuringiensis_serovar_finitimus_YBT-020 11 11
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 11 11
Bacillus_cereus_FRI-35 11 11
Bacillus_cereus_biovar_anthracis_str._CI 9 9
Bacillus_cereus_AH820 10 10
Bacillus_cereus_AH187 10 10
Bacillus_cereus_B4264 10 10
Bacillus_cereus_G9842 10 10
Bacillus_cereus_Q1 9 9
Bacillus_cereus_F837/76 11 11
Bacillus_cereus_NC7401 10 10
Bacillus_cereus_E33L 10 10
Bacillus_cereus_ATCC_14579 8 8
Bacillus_cereus_ATCC_10987 10 10
Bacillus_anthracis_str._H9401 10 10
Bacillus_anthracis_str._CDC_684 10 10
Bacillus_anthracis_str._'Ames_Ancestor' 9 9
Bacillus_anthracis_str._Sterne 10 10
Bacillus_anthracis_str._Ames 10 10
Bacillus_megaterium_WSH-002 11 11
Bacillus_megaterium_QM_B1551 8 8
Bacillus_coagulans_36D1 4 4
Staphylococcus_aureus_subsp._aureus_MSHR1132 1 1
Staphylococcus_pseudintermedius_ED99 1 1
Staphylococcus_pasteuri_SP1 1 1
Staphylococcus_lugdunensis_N920143 1 1
Staphylococcus_warneri_SG1 1 1
Staphylococcus_epidermidis_ATCC_12228 1 1
Staphylococcus_aureus_CA-347 1 1
Staphylococcus_aureus_Bmb9393 1 1
Staphylococcus_aureus_M1 1 1
Staphylococcus_aureus_08BA02176 1 1
Staphylococcus_aureus_ST228/18412 1 1
Staphylococcus_aureus_ST228/18341 1 1
Staphylococcus_aureus_ST228/16125 1 1
Staphylococcus_aureus_ST228/16035 1 1
Staphylococcus_aureus_ST228/15532 1 1
Staphylococcus_aureus_ST228/10497 1 1
Staphylococcus_aureus_ST228/10388 1 1
Staphylococcus_aureus_04-02981 1 1
Staphylococcus_aureus_RF122 1 1
Staphylococcus_aureus_subsp._aureus_Z172 1 1
Staphylococcus_aureus_subsp._aureus_6850 1 1
Staphylococcus_aureus_subsp._aureus_SA957 1 1
Staphylococcus_aureus_subsp._aureus_CN1 1 1
Staphylococcus_aureus_subsp._aureus_SA40 1 1
Staphylococcus_aureus_subsp._aureus_11819-97 1 1
Staphylococcus_aureus_subsp._aureus_M013 1 1
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 2 2
Staphylococcus_aureus_subsp._aureus_VC40 1 1
Staphylococcus_aureus_subsp._aureus_T0131 1 1
Staphylococcus_aureus_subsp._aureus_LGA251 2 2
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1 1
Staphylococcus_aureus_subsp._aureus_JKD6159 1 1
Staphylococcus_aureus_subsp._aureus_ED133 1 1
Staphylococcus_aureus_subsp._aureus_ED98 1 1
Staphylococcus_aureus_subsp._aureus_TW20 1 1
Staphylococcus_aureus_subsp._aureus_55/2053 1 1
Staphylococcus_aureus_subsp._aureus_TCH60 1 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1 1
Staphylococcus_aureus_subsp._aureus_71193 1 1
Staphylococcus_aureus_subsp._aureus_S0385 1 1
Staphylococcus_aureus_subsp._aureus_str._Newman 1 1
Staphylococcus_aureus_subsp._aureus_Mu3 1 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1 1
Staphylococcus_aureus_subsp._aureus_JH9 1 1
Staphylococcus_aureus_subsp._aureus_MSSA476 1 1
Staphylococcus_aureus_subsp._aureus_MRSA252 1 1
Staphylococcus_aureus_subsp._aureus_MW2 1 1
Staphylococcus_aureus_subsp._aureus_N315 1 1
Staphylococcus_aureus_subsp._aureus_Mu50 1 1
Staphylococcus_aureus_subsp._aureus_COL 1 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1 1
Chlorobium_phaeobacteroides_BS1 3 3
Salinibacter_ruber_DSM_13855 1 1
Rhodothermus_marinus_SG0.5JP17-172 2 2
Emticicia_oligotrophica_DSM_17448 1 1
Psychroflexus_torquis_ATCC_700755 3 3
Fibrobacter_succinogenes_subsp._succinogenes_S85 27 27
Singulisphaera_acidiphila_DSM_18658 12 12
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 16 16
Leptospira_interrogans_serovar_Lai_str._56601 35 34
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 36 35
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 37 37
Brachyspira_pilosicoli_WesB 6 6
Brachyspira_pilosicoli_B2904 6 6
Brachyspira_pilosicoli_P43/6/78 6 6
Borrelia_garinii_NMJW1 1 1
Borrelia_garinii_BgVir 1 1
Borrelia_afzelii_HLJ01 1 1
Borrelia_afzelii_PKo 1 1
Borrelia_burgdorferi_CA382 1 1
Borrelia_burgdorferi_JD1 1 1
Borrelia_burgdorferi_N40 1 1
Borrelia_burgdorferi_ZS7 1 1
Borrelia_miyamotoi_LB-2001 1 1
Treponema_pedis_str._T_A4 17 17
Treponema_pallidum_str._Fribourg-Blanc 3 3
Treponema_pallidum_subsp._pertenue_str._Gauthier 3 3
Treponema_pallidum_subsp._pertenue_str._CDC2 3 3
Treponema_pallidum_subsp._pertenue_str._SamoaD 3 3
Treponema_pallidum_subsp._pallidum_str._Mexico_A 3 3
Treponema_pallidum_subsp._pallidum_str._Chicago 2 2
Treponema_pallidum_subsp._pallidum_DAL-1 3 3
Treponema_pallidum_subsp._pallidum_str._Nichols 2 2
Spirochaeta_thermophila_DSM_6578 18 18
Thermotoga_maritima_MSB8 11 11
Hydrogenobacter_thermophilus_TK-6 4 4
Leptospirillum_ferriphilum_ML-04 26 26
Acidithiobacillus_ferrooxidans_ATCC_23270 4 4
Bdellovibrio_exovorus_JSS 8 8
Bdellovibrio_bacteriovorus_str._Tiberius 8 8
Arcobacter_butzleri_7h1h 21 21
Arcobacter_butzleri_ED-1 25 25
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 2 2
Campylobacter_jejuni_RM1221 2 2
Campylobacter_jejuni_subsp._jejuni_00-2544 2 2
Campylobacter_jejuni_subsp._jejuni_00-2538 2 2
Campylobacter_jejuni_subsp._jejuni_00-2426 2 2
Campylobacter_jejuni_subsp._jejuni_00-2425 2 2
Campylobacter_jejuni_subsp._jejuni_PT14 2 2
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1 1
Campylobacter_jejuni_subsp._jejuni_S3 2 2
Campylobacter_jejuni_subsp._jejuni_M1 2 2
Campylobacter_jejuni_subsp._jejuni_IA3902 2 2
Campylobacter_jejuni_subsp._jejuni_81116 2 2
Campylobacter_jejuni_subsp._jejuni_81-176 2 2
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 2 2
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 2 2
Campylobacter_coli_76339 2 2
Campylobacter_coli_15-537360 2 2
Campylobacter_coli_CVM_N29710 2 2
Desulfocapsa_sulfexigens_DSM_10523 34 33
Desulfobacula_toluolica_Tol2 24 24
Lawsonia_intracellularis_N343 2 2
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 60 60
Desulfovibrio_vulgaris_RCH1 25 25
Desulfovibrio_vulgaris_str._'Miyazaki_F' 28 28
Desulfovibrio_vulgaris_str._Hildenborough 27 27
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 36 36
Desulfovibrio_desulfuricans_ND132 20 20
Geobacter_sp._M18 33 33
Geobacter_sulfurreducens_PCA 29 29
Sorangium_cellulosum_So0157-2 28 26
Anaeromyxobacter_sp._K 11 11
Anaeromyxobacter_dehalogenans_2CP-C 11 11
Myxococcus_stipitatus_DSM_14675 38 37
Burkholderia_phenoliruptrix_BR3459a 31 31
Pandoraea_pnomenusa_3kgm 28 28
Ralstonia_pickettii_12J 26 26
Ralstonia_solanacearum_FQY_4 24 24
Ralstonia_solanacearum_Po82 23 23
Ralstonia_solanacearum_PSI07 26 26
Ralstonia_solanacearum_CMR15 25 24
Ralstonia_solanacearum_GMI1000 23 23
Burkholderia_sp._YI23 32 32
Burkholderia_sp._CCGE1003 27 27
Burkholderia_sp._CCGE1001 30 30
Burkholderia_sp._KJ006 21 21
Burkholderia_thailandensis_MSMB121 12 12
Burkholderia_pseudomallei_MSHR305 12 12
Burkholderia_pseudomallei_NCTC_13179 13 13
Burkholderia_pseudomallei_BPC006 12 12
Burkholderia_pseudomallei_1026b 12 12
Burkholderia_pseudomallei_MSHR346 5 5
Burkholderia_pseudomallei_668 12 12
Burkholderia_pseudomallei_1710b 12 12
Burkholderia_pseudomallei_K96243 12 12
Burkholderia_mallei_NCTC_10229 10 10
Burkholderia_mallei_NCTC_10247 10 10
Burkholderia_mallei_ATCC_23344 10 10
Burkholderia_lata 24 24
Burkholderia_ambifaria_MC40-6 23 23
Burkholderia_cenocepacia_MC0-3 21 21
Burkholderia_cenocepacia_AU_1054 19 19
Burkholderia_cenocepacia_J2315 20 20
Burkholderia_multivorans_ATCC_17616 16 16
Burkholderia_cepacia_GG4 18 18
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 51 51
Alicycliphilus_denitrificans_BC 27 27
Variovorax_paradoxus_B4 11 11
Variovorax_paradoxus_EPS 9 9
Bordetella_pertussis_CS 7 7
Bordetella_parapertussis_18323 5 5
Bordetella_parapertussis_Bpp5 13 13
Bordetella_bronchiseptica_MO149 16 16
Bordetella_bronchiseptica_253 16 16
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 24 24
Nitrosomonas_sp._AL212 23 23
Sulfuricella_denitrificans_skB26 49 49
Caulobacter_crescentus_CB15 15 14
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 3 3
Zymomonas_mobilis_subsp._mobilis_CP4 4 4
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 2 2
Zymomonas_mobilis_subsp._mobilis_ZM4 4 4
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 4 4
Phaeobacter_gallaeciensis_DSM_17395 12 12
Phaeobacter_gallaeciensis_DSM_26640 12 12
Leisingera_methylohalidivorans_DSM_14336 13 13
Octadecabacter_antarcticus_307 7 7
Octadecabacter_arcticus_238 3 3
Rhodobacter_sphaeroides_KD131 14 14
Rhodobacter_sphaeroides_ATCC_17025 16 15
Rhodobacter_sphaeroides_2.4.1 16 16
Paracoccus_aminophilus_JCM_7686 4 4
Magnetospirillum_gryphiswaldense_MSR-1_v2 58 58
Rhodospirillum_rubrum_ATCC_11170 37 37
Gluconacetobacter_diazotrophicus_PAl_5 18 18
Gluconobacter_oxydans_H24 9 9
Acetobacter_pasteurianus_386B 1 1
Acetobacter_pasteurianus_IFO_3283-12 1 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1 1
Acetobacter_pasteurianus_IFO_3283-32 1 1
Acetobacter_pasteurianus_IFO_3283-26 1 1
Acetobacter_pasteurianus_IFO_3283-22 1 1
Acetobacter_pasteurianus_IFO_3283-07 1 1
Acetobacter_pasteurianus_IFO_3283-03 1 1
Micavibrio_aeruginosavorus_EPB 11 10
Wolbachia_endosymbiont_of_Drosophila_melanogaster 1 1
Wolbachia_endosymbiont_of_Onchocerca_ochengi_str._Adamawa_Cameroon 1 1
Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi 1 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 1 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 1 1
Ehrlichia_muris_AS145 2 2
Ehrlichia_ruminantium_str._Welgevonden 2 2
Ehrlichia_ruminantium_str._Welgevonden 2 2
Anaplasma_phagocytophilum_str._Dog2 2 2
Anaplasma_phagocytophilum_str._HZ2 2 2
Anaplasma_phagocytophilum_str._JM 2 2
Anaplasma_marginale_str._Dawn 1 1
Anaplasma_marginale_str._Gypsy_Plains 1 1
Anaplasma_marginale_str._St._Maries 1 1
Orientia_tsutsugamushi_str._Ikeda 1 1
Rickettsia_bellii_RML369-C 1 1
Rickettsia_canadensis_str._CA410 1 1
Rickettsia_typhi_str._B9991CWPP 1 1
Rickettsia_typhi_str._TH1527 1 1
Rickettsia_prowazekii_str._Breinl 1 1
Rickettsia_prowazekii_str._NMRC_Madrid_E 1 1
Rickettsia_prowazekii_str._RpGvF24 1 1
Rickettsia_prowazekii_str._GvV257 1 1
Rickettsia_prowazekii_str._Dachau 1 1
Rickettsia_prowazekii_str._Katsinyian 1 1
Rickettsia_prowazekii_str._Chernikova 1 1
Rickettsia_prowazekii_Rp22 1 1
Rickettsia_prowazekii_str._Madrid_E 1 1
Rickettsia_slovaca_str._D-CWPP 1 1
Rickettsia_massiliae_str._AZT80 1 1
Rickettsia_rickettsii_str._Arizona 1 1
Rickettsia_rickettsii_str._Brazil 1 1
Rickettsia_rickettsii_str._Hauke 1 1
Rickettsia_rickettsii_str._Colombia 1 1
Rickettsia_rickettsii__str._Hlp#2 1 1
Rickettsia_rickettsii_str._Hino 1 1
Rickettsia_rickettsii_str._Iowa 1 1
Methylobacterium_extorquens_DM4 39 39
Methylobacterium_extorquens_PA1 37 36
Brucella_ceti_TE10759-12 9 9
Brucella_ceti_TE28753-12 7 7
Brucella_canis_HSK_A52141 10 10
Brucella_suis_VBI22 8 8
Brucella_suis_1330 8 8
Brucella_suis_1330 8 8
Brucella_melitensis_NI 10 10
Brucella_melitensis_M5-90 10 10
Brucella_melitensis_M28 10 10
Brucella_melitensis_bv._1_str._16M 9 9
Brucella_abortus_A13334 8 8
Brucella_melitensis_biovar_Abortus_2308 4 4
Brucella_abortus_bv._1_str._9-941 4 4
Sinorhizobium_fredii_USDA_257 57 57
Sinorhizobium_fredii_HH103 69 69
Sinorhizobium_meliloti_2011 36 36
Sinorhizobium_meliloti_GR4 58 58
Sinorhizobium_meliloti_Rm41 46 46
Sinorhizobium_meliloti_SM11 51 51
Sinorhizobium_meliloti_BL225C 50 50
Sinorhizobium_meliloti_1021 49 49
Rhizobium_etli_CFN_42 57 57
Rhizobium_etli_bv._mimosae_str._Mim1 58 58
Rhizobium_tropici_CIAT_899 41 41
Rhizobium_leguminosarum_bv._trifolii_WSM2304 65 65
Rhizobium_leguminosarum_bv._trifolii_WSM1325 64 64
Liberibacter_crescens_BT-1 4 4
Candidatus_Liberibacter_solanacearum_CLso-ZC1 2 2
Candidatus_Liberibacter_americanus_str._Sao_Paulo 2 2
Candidatus_Liberibacter_asiaticus_str._gxpsy 2 2
Mesorhizobium_australicum_WSM2073 27 27
Hyphomicrobium_nitrativorans_NL23 21 21
Hyphomicrobium_denitrificans_1NES1 11 11
Oligotropha_carboxidovorans_OM5 21 21
Oligotropha_carboxidovorans_OM5 21 21
Rhodopseudomonas_palustris_DX-1 40 40
Rhodopseudomonas_palustris_TIE-1 40 40
Rhodopseudomonas_palustris_HaA2 42 42
Rhodopseudomonas_palustris_BisB5 28 28
Rhodopseudomonas_palustris_BisB18 31 31
Rhodopseudomonas_palustris_CGA009 43 43
Bradyrhizobium_sp._S23321 55 55
Bradyrhizobium_sp._BTAi1 43 43
Bradyrhizobium_oligotrophicum_S58 50 49
Bradyrhizobium_japonicum_USDA_6 71 71
Bartonella_australis_Aust/NH1 1 1
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 1 1
Bartonella_quintana_RM-11 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 39 39
Aeromonas_hydrophila_ML09-119 43 43
Vibrio_fischeri_ES114 41 41
Vibrio_sp._EJY3 35 35
Vibrio_parahaemolyticus_BB22OP 44 44
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 43 43
Vibrio_anguillarum_Listonella_anguillarum_M3 35 35
Vibrio_nigripulchritudo_VibrioScope 62 62
Vibrio_vulnificus_CMCP6 65 65
Vibrio_vulnificus_YJ016 66 66
Vibrio_cholerae_LMA3984-4 38 38
Vibrio_cholerae_M66-2 40 40
Vibrio_cholerae_O395 41 41
Vibrio_cholerae_IEC224 41 41
Vibrio_cholerae_O1_str._2010EL-1786 41 41
Vibrio_cholerae_MJ-1236 40 40
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 39 39
Idiomarina_loihiensis_GSL_199 33 33
Shewanella_sp._W3-18-1 45 45
Shewanella_sp._ANA-3 61 61
Shewanella_baltica_BA175 60 60
Shewanella_baltica_OS678 62 62
Shewanella_baltica_OS117 58 58
Shewanella_baltica_OS223 61 61
Shewanella_baltica_OS195 62 62
Shewanella_baltica_OS155 62 62
Shewanella_sp._MR-7 58 58
Shewanella_putrefaciens_200 44 44
Glaciecola_psychrophila_170 48 48
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 51 51
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 52 52
Alteromonas_macleodii_str._'Ionian_Sea_U8' 53 53
Alteromonas_macleodii_str._'Ionian_Sea_U7' 53 53
Alteromonas_macleodii_str._'Ionian_Sea_U4' 55 55
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 50 50
Alteromonas_macleodii_str._'English_Channel_615' 49 49
Alteromonas_macleodii_AltDE1 52 52
Alteromonas_macleodii_str._'English_Channel_673' 57 57
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 59 59
Alteromonas_macleodii_str._'Black_Sea_11' 55 55
Alteromonas_macleodii_ATCC_27126 56 56
Alcanivorax_dieselolei_B5 13 13
Thalassolituus_oleivorans_MIL-1 43 43
Stenotrophomonas_maltophilia_D457 28 28
Stenotrophomonas_maltophilia_JV3 29 29
Stenotrophomonas_maltophilia_R551-3 29 29
Xylella_fastidiosa_subsp._fastidiosa_GB514 3 3
Xylella_fastidiosa_M12 3 3
Xylella_fastidiosa_Temecula1 3 3
Xylella_fastidiosa_9a5c 3 3
Xanthomonas_citri_subsp._citri_Aw12879 33 33
Xanthomonas_campestris_pv._vesicatoria_str._85-10 31 31
Xanthomonas_axonopodis_pv._citrumelo_F1 31 31
Xanthomonas_axonopodis_Xac29-1 29 29
Xanthomonas_oryzae_pv._oryzicola_BLS256 27 27
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 22 22
Xanthomonas_oryzae_pv._oryzae_KACC_10331 20 20
Xanthomonas_campestris_pv._raphani_756C 32 32
Xanthomonas_campestris_pv._campestris_str._8004 33 33
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 33 33
Spiribacter_salinus_M19-40 2 2
Thioalkalivibrio_nitratireducens_DSM_14787 20 20
Thioflavicoccus_mobilis_8321 24 24
Coxiella_burnetii_CbuK_Q154 1 1
Coxiella_burnetii_CbuG_Q212 2 2
Coxiella_burnetii_RSA_331 1 1
Coxiella_burnetii_RSA_493 2 2
Legionella_pneumophila_str._Paris 25 25
Legionella_pneumophila_str._Lens 24 24
Legionella_pneumophila_subsp._pneumophila_LPE509 26 26
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 24 24
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 24 24
Legionella_pneumophila_subsp._pneumophila 26 26
Legionella_pneumophila_subsp._pneumophila 25 25
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 22 22
Legionella_pneumophila_2300/99_Alcoy 28 28
Proteus_mirabilis_BB2000 1 1
Edwardsiella_tarda_C07-087 12 12
Edwardsiella_tarda_FL6-60 11 11
Rahnella_aquatilis_HX2 19 19
Yersinia_pseudotuberculosis_PB1/+ 6 6
Yersinia_pseudotuberculosis_YPIII 6 6
Yersinia_pseudotuberculosis_IP_32953 6 6
Yersinia_pestis_biovar_Microtus_str._91001 6 6
Yersinia_pestis_A1122 6 6
Yersinia_pestis_Z176003 6 6
Yersinia_pestis_D182038 6 6
Yersinia_pestis_D106004 6 6
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 6 6
Yersinia_pestis_Nepal516 6 6
Yersinia_pestis_Antiqua 6 6
Yersinia_pestis_Angola 5 5
Yersinia_pestis_CO92 6 6
Yersinia_pestis_KIM10+ 6 6
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 15 15
Yersinia_enterocolitica_subsp._palearctica_Y11 16 16
Serratia_sp._AS13 15 15
Serratia_plymuthica_S13 16 16
Serratia_plymuthica_4Rx13 16 16
Serratia_marcescens_FGI94 8 8
Serratia_marcescens_WW4 15 15
Serratia_liquefaciens_ATCC_27592 14 14
Dickeya_dadantii_Ech586 17 17
Dickeya_dadantii_3937 14 14
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 16 16
Pantoea_ananatis_LMG_5342 19 19
Pantoea_ananatis_PA13 19 19
Pantoea_ananatis_AJ13355 19 19
Erwinia_pyrifoliae_DSM_12163 7 7
Erwinia_amylovora_CFBP1430 7 7
Cronobacter_sakazakii_CMCC_45402 20 20
Cronobacter_sakazakii_SP291 20 20
Cronobacter_sakazakii_ATCC_BAA-894 19 19
Raoultella_ornithinolytica_B6 19 19
Shigella_sonnei_53G 15 15
Shigella_flexneri_2002017 9 9
Shigella_flexneri_2a_str._2457T 6 6
Shigella_flexneri_2a_str._301 8 8
Shigella_dysenteriae_1617 13 13
Shigella_boydii_Sb227 13 13
Salmonella_bongori_N268-08 12 12
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 7 7
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 11 11
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 11 11
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 11 11
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 10 10
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 11 11
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 10 10
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 11 11
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 11 11
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 12 12
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 11 11
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 12 12
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 12 12
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 11 11
Salmonella_enterica_serovar_Bovismorbificans_genomics 12 12
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 11 11
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 10 10
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 11 11
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 12 12
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 11 11
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 12 12
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 12 12
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 11 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 11 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 11 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 11 11
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 11 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 11 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 11 11
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 10 10
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 10 10
Klebsiella_oxytoca_KCTC_1686 18 18
Klebsiella_pneumoniae_JM45 16 16
Klebsiella_pneumoniae_CG43 16 16
Klebsiella_pneumoniae_KCTC_2242 16 16
Klebsiella_pneumoniae_342 22 22
Klebsiella_pneumoniae_subsp._pneumoniae_1084 18 18
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 16 16
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 18 18
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 16 16
Enterobacter_aerogenes_EA1509E 20 20
Escherichia_coli_E24377A 19 19
Escherichia_coli_E._coli_PMV-1 17 17
Escherichia_coli_JJ1886 18 18
Escherichia_coli_LY180 16 16
Escherichia_coli_APEC_O78 18 18
Escherichia_coli_O7:K1_str._CE10 18 18
Escherichia_coli_O104:H4_str._2009EL-2050 19 19
Escherichia_coli_O104:H4_str._2009EL-2071 19 19
Escherichia_coli_O104:H4_str._2011C-3493 19 19
Escherichia_coli_NA114 17 17
Escherichia_coli_P12b 17 17
Escherichia_coli_str._'clone_D_i2' 18 18
Escherichia_coli_str._'clone_D_i14' 18 18
Escherichia_coli_UM146 18 18
Escherichia_coli_042 16 16
Escherichia_coli_Xuzhou21 16 16
Escherichia_coli_IHE3034 18 18
Escherichia_coli_UMNK88 17 17
Escherichia_coli_O83:H1_str._NRG_857C 18 18
Escherichia_coli_ABU_83972 18 18
Escherichia_coli_KO11FL 18 18
Escherichia_coli_KO11FL 18 18
Escherichia_coli_LF82 18 18
Escherichia_coli_ED1a 13 13
Escherichia_coli_IAI39 17 17
Escherichia_coli_UMN026 17 17
Escherichia_coli_55989 17 17
Escherichia_coli_S88 17 17
Escherichia_coli_IAI1 17 17
Escherichia_coli_W 18 18
Escherichia_coli_W 18 18
Escherichia_coli_DH1 17 17
Escherichia_coli_DH1 17 17
Escherichia_coli_ATCC_8739 18 18
Escherichia_coli_BL21(DE3) 17 17
Escherichia_coli_BL21(DE3) 17 17
Escherichia_coli_SMS-3-5 18 18
Escherichia_coli_SE15 18 18
Escherichia_coli_SE11 19 19
Escherichia_coli_APEC_O1 17 17
Escherichia_coli_O103:H2_str._12009 16 16
Escherichia_coli_UTI89 18 18
Escherichia_coli_536 18 18
Escherichia_coli_HS 16 16
Escherichia_coli_ETEC_H10407 18 18
Escherichia_coli_O55:H7_str._RM12579 17 17
Escherichia_coli_O55:H7_str._CB9615 17 17
Escherichia_coli_O26:H11_str._11368 15 15
Escherichia_coli_CFT073 18 18
Escherichia_coli_O111:H-_str._11128 16 16
Escherichia_coli_O127:H6_str._E2348/69 13 13
Escherichia_coli_O157:H7_str._TW14359 16 16
Escherichia_coli_O157:H7_str._EC4115 15 15
Escherichia_coli_O157:H7_str._Sakai 16 16
Escherichia_coli_O157:H7_str._EDL933 18 18
Escherichia_coli_str._K-12_substr._MDS42 14 14
Escherichia_coli_BW2952 18 18
Escherichia_coli_str._K-12_substr._MG1655 18 18
Escherichia_coli_str._K-12_substr._W3110 18 18
Escherichia_coli_str._K-12_substr._DH10B 17 17
Escherichia_coli_B_str._REL606 17 17
Enterobacter_cloacae_SCF1 26 26
Enterobacter_cloacae_EcWSU1 24 24
Enterobacter_cloacae_subsp._cloacae_ENHKU01 22 22
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 14 14
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 23 23
Azotobacter_vinelandii_CA6 25 24
Azotobacter_vinelandii_CA 25 24
Pseudomonas_denitrificans_ATCC_13867 42 42
Pseudomonas_syringae_pv._phaseolicola_1448A 35 35
Pseudomonas_syringae_pv._syringae_B728a 38 38
Pseudomonas_stutzeri_CCUG_29243 37 37
Pseudomonas_stutzeri_DSM_10701 25 25
Pseudomonas_stutzeri_DSM_4166 37 37
Pseudomonas_stutzeri_RCH2 37 37
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 37 37
Pseudomonas_monteilii_SB3101 35 35
Pseudomonas_monteilii_SB3078 35 35
Pseudomonas_putida_H8234 37 37
Pseudomonas_putida_HB3267 35 35
Pseudomonas_putida_NBRC_14164 38 38
Pseudomonas_putida_DOT-T1E 37 37
Pseudomonas_putida_S16 35 35
Pseudomonas_putida_BIRD-1 38 38
Pseudomonas_putida_W619 36 36
Pseudomonas_putida_ND6 36 36
Pseudomonas_putida_KT2440 37 37
Pseudomonas_putida_GB-1 35 35
Pseudomonas_protegens_CHA0 38 38
Pseudomonas_poae_RE*1-1-14 31 31
Pseudomonas_fluorescens_F113 41 41
Pseudomonas_fluorescens_A506 31 31
Pseudomonas_fluorescens_R124 36 36
Pseudomonas_fluorescens_Pf0-1 39 39
Pseudomonas_resinovorans_NBRC_106553 50 50
Pseudomonas_mendocina_NK-01 54 54
Pseudomonas_aeruginosa_SCV20265 36 35
Pseudomonas_aeruginosa_MTB-1 33 33
Pseudomonas_aeruginosa_LES431 34 34
Pseudomonas_aeruginosa_RP73 33 33
Pseudomonas_aeruginosa_B136-33 34 34
Pseudomonas_aeruginosa_PA1R 31 31
Pseudomonas_aeruginosa_PA1 33 33
Pseudomonas_aeruginosa_DK2 32 32
Pseudomonas_aeruginosa_NCGM2.S1 33 33
Pseudomonas_aeruginosa_M18 34 34
Pseudomonas_aeruginosa_LESB58 33 33
Pseudomonas_aeruginosa_PA7 33 33
Pseudomonas_aeruginosa_PAO1 34 34
Acinetobacter_genomosp._13TU__RUH2624 11 11
Acinetobacter_sp.__SH024 11 11
Acinetobacter_calcoaceticus_ruh2202 12 12
Acinetobacter_baumannii_ZW85-1 11 11
Acinetobacter_baumannii_TYTH-1 11 11
Acinetobacter_baumannii_BJAB0868 11 11
Acinetobacter_baumannii_BJAB0715 11 11
Acinetobacter_baumannii_BJAB07104 11 11
Acinetobacter_baumannii_TCDC-AB0715 11 11
Acinetobacter_baumannii_D1279779 11 11
Acinetobacter_baumannii_MDR-TJ 11 11
Acinetobacter_baumannii_1656-2 11 11
Acinetobacter_baumannii__ATCC_19606 11 11
Acinetobacter_baumannii_AB307-0294 10 10
Acinetobacter_baumannii_AYE 11 11
Acinetobacter_baumannii_SDF 5 5
Acinetobacter_baumannii_MDR-ZJ06 10 10
Acinetobacter_baumannii_AB0057 11 11
Acinetobacter_baumannii_ACICU 11 11
Acinetobacter_radioresistens__SH164 17 17
Acinetobacter_junii__SH205 12 12
Acinetobacter_johnsonii__SH046 16 16
Acinetobacter_lwoffii__SH145 18 18
Methylophaga_sp._JAM7 31 31
Cycloclasticus_zancles_7-ME 25 25
Candidatus_Nitrososphaera_gargensis_Ga9.2 6 6
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 5 5
Methanomethylovorans_hollandica_DSM_15978 2 2
Thermococcus_sp._CL1 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   28 18
Pan_troglodytes_69_2.1.4   (Chimpanzee)   25 17
Gorilla_gorilla_69_3.1   (Western gorilla)   29 19
Pongo_abelii_69_2   (Sumatran orangutan)   27 19
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   29 19
Macaca_mulatta_69_1   (Rhesus monkey)   28 19
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   29 19
Otolemur_garnettii_69_3   (Small-eared galago)   33 22
Microcebus_murinus_69_1   (Gray mouse lemur)   29 19
Rattus_norvegicus_69_3.4   (Norway rat)   30 21
Mus_musculus_69_38   (House mouse)   31 21
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   28 18
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   28 19
Cavia_porcellus_69_3   (Domestic guinea pig)   28 19
Oryctolagus_cuniculus_69_2   (Rabbit)   32 21
Ochotona_princeps_69   (American pika)   28 18
Tupaia_belangeri_69   (Northern tree shrew)   28 19
Sus_scrofa_69_10.2   (Pig)   34 24
Bos_taurus_69_3.1   (Cattle)   33 22
Vicugna_pacos_69_1   (Alpaca)   20 14
Tursiops_truncatus_69_1   (Bottlenose dolphin)   29 19
Mustela_putorius_furo_69_1.0   (Domestic ferret)   30 20
Ailuropoda_melanoleuca_69_1   (Giant panda)   30 21
Canis_familiaris_69_3.1   (Dog)   34 22
Felis_catus_69   (Domestic cat)   23 16
Equus_caballus_69_2   (Horse)   32 21
Myotis_lucifugus_69_2.0   (Little brown bat)   30 21
Pteropus_vampyrus_69_1   (Large flying fox)   27 19
Sorex_araneus_69_1   (European shrew)   18 15
Erinaceus_europaeus_69   (Western European hedgehog)   30 18
Procavia_capensis_69_1   (Cape rock hyrax)   28 19
Loxodonta_africana_69_3   (African savanna elephant)   32 22
Echinops_telfairi_69   (Small Madagascar hedgehog)   28 18
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   26 16
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   17 12
Macropus_eugenii_69_1.0   (Tammar wallaby)   30 18
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   30 20
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   29 20
Ornithorhynchus_anatinus_69_5   (Platypus)   32 28
Petromyzon_marinus_69_7.0   (Sea lamprey)   18 15
Meleagris_gallopavo_69_2   (Turkey)   25 19
Gallus_gallus_69_2   (Chicken)   23 15
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   24 20
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   32 22
Anolis_carolinensis_69_2.0   (Green anole)   32 22
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   28 20
Latimeria_chalumnae_69_1   (Coelacanth)   30 23
Gadus_morhua_69_1   (Atlantic cod)   47 33
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   49 37
Takifugu_rubripes_69_4   (Torafugu)   50 34
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   45 32
Oryzias_latipes_69_1   (Japanese medaka)   44 30
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   46 30
Oreochromis_niloticus_69_1.0   (Nile tilapia)   49 32
Danio_rerio_69_9   (Zebrafish)   43 30
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   20 16
Ciona_intestinalis_69   (Vase tunicate)   17 14
Drosophila_melanogaster_69_5   (Fruit fly)   39 26
Caenorhabditis_elegans_69_215   (Roundworm)   42 38
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   88 66
Homo_sapiens__(NCBI_version)   (Human)   42 28
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   31 21
Loa_loa_v3.3_(Request)   (Eye worm)   15 15
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   16 15
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   10 9
Encephalitozoon_intestinalis__(endoparasite) 2 2
Encephalitozoon_cuniculi_(endoparasite) 2 2
Lotus_japonicus__(Early_assembly) 1 1
Ricinus_communis__(Early_assembly)   (Castor bean)   24 24
Acholeplasma_laidlawii_PG-8A_(duplicate) 14 14
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 17 17
Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 43 43
NCBI_plasmid_sequences_(Plasmids) 976 974
UniProt__viral_sequences_(Viral) 5 5
TargetDB__(Targets) 759 755
Protozoadb_2010_08_(Protozoadb) 502 452
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 510 510
NCBI_viral_sequences_(Viral) 26 26
STRING_v9.0.5_(STRING) 15270 14668
PDB_chains_(SCOP_1.75)_(PDB) 11 11
Protein_Data_Bank_(all_PDB_sequenc) 324 294
Uniprot_2018_03_genome 310022 303642
NCBI_2017_08_genome 1125003 1113412

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]