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Domain combinations for Copper amine oxidase, domain N superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Copper amine oxidase, domain N domain in that genome.

Complete genomes
Genome     Number   Proteins
Physcomitrella_patens 4 4
Gloeobacter_violaceus_PCC_7421 1 1
Deinococcus_gobiensis_I-0 1 1
Deinococcus_deserti_VCD115 1 1
Deinococcus_maricopensis_DSM_21211 1 1
Anaerococcus_prevotii_DSM_20548 1 1
Finegoldia_magna_ATCC_29328 1 1
Veillonella_parvula_DSM_2008 1 1
Megasphaera_elsdenii_DSM_20460 1 1
Acidaminococcus_intestini_RyC-MR95 1 1
Megamonas_hypermegale 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 32 30
Symbiobacterium_thermophilum_IAM_14863 23 16
Clostridium_clariflavum_DSM_19732 40 32
Clostridium_cellulolyticum_H10 12 11
Clostridium_thermocellum_ATCC_27405 36 32
Oscillibacter_valericigenes_Sjm18-20 4 4
Candidatus_Desulforudis_audaxviator_MP104C 20 16
Thermincola_potens_JR 9 8
Pelotomaculum_thermopropionicum_SI 25 17
Desulfotomaculum_reducens_MI-1 23 17
Desulfotomaculum_acetoxidans_DSM_771 30 23
Desulfotomaculum_kuznetsovii_DSM_6115 27 18
Desulfotomaculum_carboxydivorans_CO-1-SRB 17 14
Desulfotomaculum_ruminis_DSM_2154 40 31
Eubacterium_eligens_ATCC_27750 1 1
Clostridium_sticklandii_DSM_519 14 12
Filifactor_alocis_ATCC_35896 13 11
Clostridium_phytofermentans_ISDg 4 2
Clostridium_lentocellum_DSM_5427 55 45
Roseburia_hominis_A2-183 1 1
Roseburia_intestinalis 1 1
Syntrophothermus_lipocalidus_DSM_12680 15 12
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 13 9
Heliobacterium_modesticaldum_Ice1 15 10
Alkaliphilus_oremlandii_OhILAs 7 7
Alkaliphilus_metalliredigens_QYMF 15 14
Clostridium_sp._BNL1100 12 12
Clostridium_ljungdahlii_DSM_13528 2 2
Clostridium_kluyveri_DSM_555 1 1
Clostridium_cellulovorans_743B 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Thermosediminibacter_oceani_DSM_16646 10 10
Caldicellulosiruptor_obsidiansis_OB47 2 2
Caldicellulosiruptor_kronotskyensis_2002 2 2
Caldicellulosiruptor_hydrothermalis_108 3 2
Caldicellulosiruptor_owensensis_OL 2 2
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 2 2
Caldicellulosiruptor_saccharolyticus_DSM_8903 3 3
Caldicellulosiruptor_bescii_DSM_6725 3 3
Thermoanaerobacterium_xylanolyticum_LX-11 8 5
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 13 10
Thermodesulfobium_narugense_DSM_14796 1 1
Coprothermobacter_proteolyticus_DSM_5265 23 17
Tepidanaerobacter_acetatoxydans_Re1 8 8
Thermoanaerobacter_tengcongensis_MB4 8 7
Moorella_thermoacetica_ATCC_39073 18 14
Ammonifex_degensii_KC4 25 15
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 10 9
Thermoanaerobacter_pseudethanolicus_ATCC_33223 2 2
Thermoanaerobacter_sp._X514 1 1
Thermoanaerobacter_italicus_Ab9 5 5
Thermoanaerobacter_wiegelii_Rt8.B1 11 9
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 2 2
Acetohalobium_arabaticum_DSM_5501 2 2
Halothermothrix_orenii_H_168 2 2
Halanaerobium_hydrogeniformans 2 2
Halanaerobium_praevalens_DSM_2228 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Kyrpidia_tusciae_DSM_2912 15 11
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Brevibacillus_brevis_NBRC_100599 21 18
Paenibacillus_sp._JDR-2 29 24
Paenibacillus_terrae_HPL-003 35 31
Paenibacillus_mucilaginosus_3016 51 47
Paenibacillus_polymyxa_M1 48 43
Bacillus_selenitireducens_MLS10 1 1
Solibacillus_silvestris_StLB046 1 1
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Lysinibacillus_sphaericus_C3-41 14 11
Anoxybacillus_flavithermus_WK1 2 1
Geobacillus_kaustophilus_HTA426 2 1
Geobacillus_sp._WCH70 1 1
Bacillus_sp._1NLA3E 2 2
Bacillus_pseudofirmus_OF4 8 8
Bacillus_cellulosilyticus_DSM_2522 1 1
Melioribacter_roseus_P3M 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Opitutus_terrae_PB90-1 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Treponema_brennaborense_DSM_12168 1 1
Treponema_paraluiscuniculi_Cuniculi_A 1 1
Treponema_pallidum_subsp._pallidum_SS14 2 2
Treponema_denticola_ATCC_35405 1 1
Elusimicrobium_minutum_Pei191 1 1
Caldisericum_exile_AZM16c01 37 27
Pelobacter_carbinolicus_DSM_2380 1 1
Ralstonia_solanacearum_CFBP2957 1 1
Herbaspirillum_seropedicae_SmR1 1 1
Marinomonas_mediterranea_MMB-1 1 1
Escherichia_blattae_DSM_4481 1 1
Enterobacteriaceae_bacterium_strain_FGI_57 1 1
Klebsiella_oxytoca_E718 1 1
Klebsiella_variicola_At-22 1 1
Klebsiella_pneumoniae_NTUH-K2044 1 1
Enterobacter_aerogenes_KCTC_2190 1 1
Escherichia_fergusonii_ATCC_35469 1 1
Enterobacter_asburiae_LF7a 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Acinetobacter_oleivorans_DR1 1 1
Acinetobacter_calcoaceticus_PHEA-2 1 1
Acinetobacter_baumannii_ATCC_17978 1 1

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Strains
Genome     Number   Proteins
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1 1
Chthonomonas_calidirosea_T49 2 2
Deinococcus_peraridilitoris_DSM_19664 3 3
Clostridium_thermocellum_DSM_1313 40 36
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 8 8
Clostridium_acidurici_9a 16 14
Desulfotomaculum_gibsoniae_DSM_7213 45 36
Roseburia_intestinalis_XB6B4 1 1
Clostridium_sp._SY8519 1 1
Clostridium_autoethanogenum_DSM_10061 2 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1
Clostridium_kluyveri_NBRC_12016 1 1
Clostridium_botulinum_E3_str._Alaska_E43 1 1
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 12 9
Thermoanaerobacterium_thermosaccharolyticum_M0795 8 7
Thermacetogenium_phaeum_DSM_12270 13 9
Thermoanaerobacter_sp._X513 1 1
Halobacteroides_halobius_DSM_5150 2 2
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pneumoniae_AP200 1 1
Streptococcus_agalactiae_ILRI112 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1
Thermobacillus_composti_KWC4 23 23
Paenibacillus_sp._Y412MC10 45 42
Paenibacillus_mucilaginosus_KNP414 54 50
Paenibacillus_mucilaginosus_K02 52 48
Paenibacillus_larvae_subsp._larvae_DSM_25430 7 7
Paenibacillus_polymyxa_CR1 33 29
Paenibacillus_polymyxa_SC2 43 38
Paenibacillus_polymyxa_E681 35 32
Geobacillus_sp._Y4.1MC1 1 1
Geobacillus_sp._Y412MC52 2 1
Geobacillus_sp._Y412MC61 2 1
Amphibacillus_xylanus_NBRC_15112 1 1
Bacillus_infantis_NRRL_B-14911 3 3
Bacillus_thuringiensis_Bt407 1 1
Bacillus_megaterium_WSH-002 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Treponema_pedis_str._T_A4 1 1
Treponema_pallidum_str._Fribourg-Blanc 1 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1 1
Ralstonia_solanacearum_Po82 1 1
Raoultella_ornithinolytica_B6 1 1
Klebsiella_oxytoca_KCTC_1686 1 1
Klebsiella_pneumoniae_CG43 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Klebsiella_pneumoniae_342 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_E24377A 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_APEC_O78 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_P12b 1 1
Escherichia_coli_UMNK88 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_55989 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_O103:H2_str._12009 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 1 1
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 1 1
Escherichia_coli_str._K-12_substr._W3110 1 1
Escherichia_coli_str._K-12_substr._DH10B 1 1
Enterobacter_cloacae_SCF1 1 1
Enterobacter_cloacae_EcWSU1 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Pseudomonas_putida_ND6 1 1
Acinetobacter_genomosp._13TU__RUH2624 1 1
Acinetobacter_sp.__SH024 1 1
Acinetobacter_calcoaceticus_ruh2202 1 1
Acinetobacter_baumannii_ZW85-1 1 1
Acinetobacter_baumannii_TYTH-1 1 1
Acinetobacter_baumannii_BJAB0868 1 1
Acinetobacter_baumannii_BJAB0715 1 1
Acinetobacter_baumannii_BJAB07104 1 1
Acinetobacter_baumannii_TCDC-AB0715 1 1
Acinetobacter_baumannii_D1279779 1 1
Acinetobacter_baumannii_MDR-TJ 1 1
Acinetobacter_baumannii_1656-2 1 1
Acinetobacter_baumannii__ATCC_19606 1 1
Acinetobacter_baumannii_AB307-0294 1 1
Acinetobacter_baumannii_AYE 1 1
Acinetobacter_baumannii_MDR-ZJ06 1 1
Acinetobacter_baumannii_AB0057 1 1
Acinetobacter_baumannii_ACICU 1 1

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Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 21 20
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 96 96
Protein_Data_Bank_(all_PDB_sequenc) 36 36
STRING_v9.0.5_(STRING) 502 413
PDB_chains_(SCOP_1.75)_(PDB) 5 5
Uniprot_2018_03_genome 14142 12673
NCBI_viral_sequences_(Viral) 14 11
NCBI_2017_08_genome 30594 28487
UniProt__viral_sequences_(Viral) 1 1
TargetDB__(Targets) 18 16

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