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Domain combinations for Homing endonucleases superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Homing endonucleases domain in that genome.

Complete genomes
Genome     Number   Proteins
Helobdella_robusta_ 2 1
Sphaeroforma_arctica_JP610_ 2 2
Mortierella_verticillata_NRRL_6337_ 2 1
Sporisorium_reilianum_22 10 6
Mixia_osmundae_IAM_14324_v1.0 2 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3 3
Sporobolomyces_roseus_IAM_13481_ 1 1
Piloderma_croceum_F_1598_v1.0 1 1
Scleroderma_citrinum_Foug_A_v1.0 1 1
Hebeloma_cylindrosporum_h7_v2.0 2 1
Fomitopsis_pinicolav1.0 2 1
Daldinia_eschscholzii_EC12_v1.0 4 4
Podospora_anserina_ 45 24
Chaetomium_globosum_CBS_148.51_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 2
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Botrytis_cinerea_B05.10_ 1 1
Didymella_exigua_CBS_183.55_v1.0 9 6
Leptosphaeria_maculans_22 9 7
Cochliobolus_miyabeanus_ATCC_44560_v1.0 36 26
Cochliobolus_victoriae_FI3_v1.0 29 22
Cochliobolus_carbonum_26-R-13_v1.0 35 27
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   5 3
Alternaria_brassicicola_ 1 1
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_tritici-repentis_ 1 1
Stagonospora_nodorum_ 1 1
Septoria_musiva_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 1 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Aspergillus_zonatus_v1.0 3 2
Aspergillus_acidus_v1.0 2 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 5 3
Aspergillus_nidulans_FGSC_A4_ 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Tuber_melanosporum_Mel28_22 8 5
Tuber_melanosporum_Vittad_   (Perigord truffle)   11 8
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 2 1
Candida_tropicalis_MYA-3404_ 2 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 4 2
Pichia_stipitis_CBS_6054_ 2 1
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3 2
Debaromyces_hansenii 3 2
Wickerhamomyces_anomalus 1 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 2
Vanderwaltozyma_polyspora_DSM_70294_ 3 2
Candida_glabrata_CBS138 4 2
Kluyveromyces_waltii 1 1
Zygosaccharomyces_rouxii_ 4 2
Saccharomyces_mikatae_MIT 2 1
Saccharomyces_paradoxus_MIT 2 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   19 11
Saccharomyces_bayanus_MIT 2 1
Kluyveromyces_lactis 3 2
Schizosaccharomyces_japonicus_yFS275_ 2 1
Schizosaccharomyces_pombe   (Fission yeast)   5 3
Dictyostelium_discoideum 7 4
Dictyostelium_purpureum_ 4 3
Selaginella_moellendorffii_ 4 4
Picea_abies   (Norway spruce)   1 1
Eucalyptus_grandis_v201   (Rose gum)   2 2
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 1 1
Citrus_clementina_v165 1 1
Citrus_sinensis_v154   (Sweet orange)   2 2
Thellungiella_halophila_v173 1 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1 1
Capsella_rubella_v183 1 1
Arabidopsis_lyrata_   (Lyrate rockcress)   1 1
Arabidopsis_thaliana_10   (Thale cress)   1 1
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   2 2
Phaseolus_vulgaris_v186   (French bean)   1 1
Glycine_max_v109   (Soybean)   2 2
Cucumis_sativus_v122   (Cucumber)   1 1
Fragaria_vesca_   (Wild strawberry)   1 1
Malus_domestica_v196   (Apple)   1 1
Prunus_persica_v139   (Peach)   1 1
Linum_usitatissimum_v200   (Flax)   4 4
Manihot_esculenta_v147   (Cassava)   1 1
Populus_trichocarpa_v156   (Black cottonwood)   1 1
Vitis_vinifera_   (Wine grape)   1 1
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Solanum_tuberosum_   (Potato)   3 3
Actinidia_chinensis_Hongyang_ 2 2
Aquilegia_coerulea_v195 1 1
Triticum_urartu_22 1 1
Triticum_aestivum_22   (Bread wheat)   3 3
Aegilops_tauschii_22 1 1
Brachypodium_distachyon_   (Stiff brome)   1 1
Oryza_barthii_22   (African wild rice)   1 1
Oryza_meridionalis_22 1 1
Oryza_glumaepatula_22 1 1
Oryza_glaberrima   (African rice)   1 1
Oryza_punctata_22 1 1
Oryza_nivara_22 1 1
Oryza_brachyantha_22   (Malo sina)   1 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1 1
Oryza_sativa_v193   (Rice)   1 1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2 2
Panicum_virgatum_v202   (Switchgrass)   2 2
Setaria_italica_v164   (Foxtail millet)   1 1
Zea_mays_subsp._mays_   (Maize)   1 1
Zea_mays_v181   (Maize)   1 1
Sorghum_bicolor_   (Sorghum)   1 1
Musa_balbisiana   (Balbis banana)   1 1
Musa_acuminata_22   (Wild Malaysian banana)   1 1
Amborella_trichopoda_22 1 1
Physcomitrella_patens 3 3
Coccomyxa_subellipsoidea_sp._C-169_v2 2 1
Chlorella_vulgaris_ 2 1
Volvox_carteri_f._nagariensis_ 2 1
Porphyridium_purpureum_02_2012 1 1
Aureococcus_anophagefferens_ 1 1
Pythium_vexans_DAOM_BR484_22 2 1
Symbiodinium_minutum_clade_B1_v1.2 8 4
Pseudanabaena_sp._PCC_7367 1 1
Synechocystis_sp._PCC_6803 2 2
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_6312 3 2
Synechococcus_elongatus_PCC_7942 1 1
Microcoleus_sp._PCC_7113 1 1
Trichodesmium_erythraeum_IMS101 9 5
Geitlerinema_sp._PCC_7407 2 1
Gloeocapsa_sp._PCC_7428 1 1
Halothece_sp._PCC_7418 2 2
Gloeobacter_violaceus_PCC_7421 3 1
Rivularia_sp._PCC_7116 2 2
Calothrix_sp._PCC_7507 4 4
Anabaena_variabilis_ATCC_29413 2 1
'Nostoc_azollae'_0708 2 1
Nostoc_sp._PCC_7107 4 3
Nostoc_punctiforme_PCC_73102 1 1
Nostoc_sp._PCC_7120 4 4
Nostoc_sp._PCC_7524 2 2
Anabaena_sp._90 2 2
Aster_yellows_witches'-broom_phytoplasma_AYWB 1 1
Onion_yellows_phytoplasma_OY-M 1 1
Mesoplasma_florum_L1 1 1
Ureaplasma_parvum_serovar_3_str._ATCC_27815 1 1
Ureaplasma_urealyticum_serovar_10_str._ATCC_33699 1 1
Mycoplasma_leachii_99/014/6 1 1
Mycoplasma_mycoides_subsp._capri_LC_str._95010 1 1
Mycoplasma_capricolum_subsp._capricolum_ATCC_27343 1 1
Mycoplasma_crocodyli_MP145 1 1
Mycoplasma_conjunctivae_HRC/581 1 1
Mycoplasma_bovis_HB0801 1 1
Mycoplasma_penetrans_HF-2 1 1
Mycoplasma_putrefaciens_KS1 1 1
Mycoplasma_mobile_163K 1 1
Mycoplasma_fermentans_M64 2 1
Mycoplasma_arthritidis_158L3-1 1 1
Mycoplasma_agalactiae_PG2 1 1
Mycoplasma_synoviae_53 1 1
Mycoplasma_pulmonis_UAB_CTIP 1 1
Mycoplasma_pneumoniae_309 1 1
Mycoplasma_hyorhinis_GDL-1 1 1
Mycoplasma_hyopneumoniae_168 1 1
Mycoplasma_hominis_ATCC_23114 1 1
Mycoplasma_genitalium_G37 1 1
Mycoplasma_gallisepticum_str._F 1 1
Conexibacter_woesei_DSM_14684 1 1
Cryptobacterium_curtum_DSM_15641 1 1
Eggerthella_sp._YY7918 1 1
Eggerthella_lenta_DSM_2243 1 1
Slackia_heliotrinireducens_DSM_20476 1 1
Olsenella_uli_DSM_7084 1 1
Atopobium_parvulum_DSM_20469 1 1
Coriobacterium_glomerans_PW2 1 1
Acidimicrobium_ferrooxidans_DSM_10331 1 1
Nakamurella_multipartita_DSM_44233 1 1
Modestobacter_marinus 2 2
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 2 2
Kineococcus_radiotolerans_SRS30216 1 1
Catenulispora_acidiphila_DSM_44928 1 1
Frankia_alni_ACN14a 1 1
Thermobifida_fusca_YX 2 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 3 2
Thermomonospora_curvata_DSM_43183 4 4
Kitasatospora_setae_KM-6054 2 2
Streptomyces_sp._PAMC26508 1 1
Streptomyces_sp._SirexAA-E 1 1
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_scabiei_87.22 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1 1
Actinosynnema_mirum_DSM_43827 2 2
Kribbella_flavida_DSM_17836 1 1
Nocardioides_sp._JS614 2 2
Salinispora_arenicola_CNS-205 1 1
Verrucosispora_maris_AB-18-032 4 4
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 3 3
Actinoplanes_sp._N902-109 1 1
Actinoplanes_sp._SE50/110 1 1
Gordonia_sp._KTR9 1 1
Gordonia_polyisoprenivorans_VH2 3 2
Gordonia_bronchialis_DSM_43247 1 1
Rhodococcus_opacus_B4 2 2
Nocardia_farcinica_IFM_10152 2 2
Mycobacterium_intracellulare_ATCC_13950 1 1
Mycobacterium_avium_104 1 1
Mycobacterium_vanbaalenii_PYR-1 2 2
Mycobacterium_canettii_CIPT_140010059 2 2
Mycobacterium_africanum_GM041182 2 2
Mycobacterium_tuberculosis_KZN_1435 2 2
Mycobacterium_tuberculosis 2 2
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 2 2
Mycobacterium_rhodesiae_NBB3 2 2
Mycobacterium_gilvum_PYR-GCK 2 2
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Mycobacterium_leprae_Br4923 3 3
Tropheryma_whipplei_TW08/27 1 1
Isoptericola_variabilis_225 1 1
Cellulomonas_flavigena_DSM_20109 2 1
[Cellvibrio]_gilvus_ATCC_13127 1 1
Rothia_dentocariosa_ATCC_17931 1 1
Arthrobacter_sp._FB24 1 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1 1
Bifidobacterium_dentium_Bd1 1 1
Bifidobacterium_adolescentis_ATCC_15703 1 1
Arcanobacterium_haemolyticum_DSM_20595 1 1
Herpetosiphon_aurantiacus_DSM_785 3 2
Roseiflexus_castenholzii_DSM_13941 1 1
Truepera_radiovictrix_DSM_17093 2 2
Deinococcus_geothermalis_DSM_11300 1 1
Deinococcus_proteolyticus_MRP 1 1
Deinococcus_radiodurans_R1 3 3
Meiothermus_silvanus_DSM_9946 2 2
Meiothermus_ruber_DSM_1279 2 2
Thermus_sp._CCB_US3_UF1 1 1
Thermus_scotoductus_SA-01 3 3
Thermus_thermophilus_HB27 4 2
Anaerococcus_prevotii_DSM_20548 1 1
Finegoldia_magna_ATCC_29328 1 1
Veillonella_parvula_DSM_2008 1 1
Megasphaera_elsdenii_DSM_20460 1 1
Acidaminococcus_intestini_RyC-MR95 2 2
Acidaminococcus_fermentans_DSM_20731 1 1
Megamonas_hypermegale 1 1
Selenomonas_sputigena_ATCC_35185 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2 2
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Symbiobacterium_thermophilum_IAM_14863 1 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 1 1
Clostridium_clariflavum_DSM_19732 1 1
Eubacterium_siraeum 1 1
Clostridium_cellulolyticum_H10 1 1
Clostridium_thermocellum_ATCC_27405 2 2
Ethanoligenens_harbinense_YUAN-3 1 1
Faecalibacterium_prausnitzii 1 1
Ruminococcus_sp. 1 1
Ruminococcus_bromii 1 1
Ruminococcus_albus_7 1 1
Thermaerobacter_marianensis_DSM_12885 1 1
Sulfobacillus_acidophilus_DSM_10332 1 1
Oscillibacter_valericigenes_Sjm18-20 1 1
butyrate-producing_bacterium_SS3/4 1 1
Candidatus_Desulforudis_audaxviator_MP104C 2 2
Thermincola_potens_JR 1 1
Pelotomaculum_thermopropionicum_SI 1 1
Desulfosporosinus_acidiphilus_SJ4 1 1
Desulfosporosinus_orientis_DSM_765 1 1
Dehalobacter_sp._DCA 1 1
Dehalobacter_sp._CF 1 1
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfitobacterium_hafniense_Y51 2 2
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Desulfotomaculum_reducens_MI-1 1 1
Desulfotomaculum_acetoxidans_DSM_771 2 2
Desulfotomaculum_kuznetsovii_DSM_6115 6 6
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Acetobacterium_woodii_DSM_1030 1 1
Eubacterium_eligens_ATCC_27750 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_difficile_630 1 1
Clostridium_sticklandii_DSM_519 1 1
Filifactor_alocis_ATCC_35896 1 1
Clostridium_saccharolyticum_WM1 1 1
Clostridium_phytofermentans_ISDg 1 1
Clostridium_lentocellum_DSM_5427 1 1
Eubacterium_rectale_M104/1 1 1
Eubacterium_rectale_ATCC_33656 1 1
Coprococcus_sp._ART55/1 1 1
Roseburia_hominis_A2-183 1 1
Roseburia_intestinalis 1 1
Butyrivibrio_proteoclasticus_B316 1 1
Syntrophothermus_lipocalidus_DSM_12680 1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1 1
Heliobacterium_modesticaldum_Ice1 1 1
Alkaliphilus_oremlandii_OhILAs 1 1
Alkaliphilus_metalliredigens_QYMF 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1 1
Clostridium_sp._BNL1100 1 1
Clostridium_novyi_NT 1 1
Clostridium_ljungdahlii_DSM_13528 1 1
Clostridium_kluyveri_DSM_555 2 2
Clostridium_beijerinckii_NCIMB_8052 1 1
Clostridium_tetani_E88 1 1
Clostridium_perfringens_ATCC_13124 3 2
Clostridium_cellulovorans_743B 1 1
Clostridium_botulinum_A_str._ATCC_3502 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Mahella_australiensis_50-1_BON 3 3
Thermosediminibacter_oceani_DSM_16646 1 1
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_owensensis_OL 1 1
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 2 2
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2 2
Thermodesulfobium_narugense_DSM_14796 1 1
Tepidanaerobacter_acetatoxydans_Re1 2 2
Thermoanaerobacter_tengcongensis_MB4 1 1
Carboxydothermus_hydrogenoformans_Z-2901 2 2
Moorella_thermoacetica_ATCC_39073 1 1
Ammonifex_degensii_KC4 3 3
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 2 2
Thermoanaerobacter_sp._X514 2 2
Thermoanaerobacter_italicus_Ab9 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 1 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 2 2
Acetohalobium_arabaticum_DSM_5501 1 1
Halothermothrix_orenii_H_168 1 1
Halanaerobium_hydrogeniformans 2 2
Halanaerobium_praevalens_DSM_2228 2 2
Carnobacterium_sp._17-4 1 1
Carnobacterium_sp._WN1359 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Melissococcus_plutonius_DAT561 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecium_Aus0004 1 1
Enterococcus_faecalis_62 1 1
Weissella_koreensis_KACC_15510 1 1
Oenococcus_oeni_PSU-1 1 1
Leuconostoc_sp._C2 1 1
Leuconostoc_kimchii_IMSNU_11154 1 1
Leuconostoc_citreum_KM20 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1 1
Leuconostoc_gasicomitatum_LMG_18811 1 1
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_kefiranofaciens_ZW3 1 1
Lactobacillus_crispatus_ST1 1 1
Lactobacillus_rhamnosus_Lc_705 1 1
Lactobacillus_johnsonii_FI9785 1 1
Lactobacillus_sanfranciscensis_TMW_1.1304 1 1
Lactobacillus_salivarius_CECT_5713 1 1
Lactobacillus_fermentum_IFO_3956 1 1
Lactobacillus_amylovorus_GRL1118 1 1
Lactobacillus_sakei_subsp._sakei_23K 1 1
Lactobacillus_reuteri_DSM_20016 1 1
Lactobacillus_gasseri_ATCC_33323 1 1
Lactobacillus_plantarum_JDM1 1 1
Lactobacillus_helveticus_DPC_4571 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 1 1
Lactobacillus_buchneri_NRRL_B-30929 1 1
Lactobacillus_buchneri 1 1
Lactobacillus_brevis_ATCC_367 1 1
Lactobacillus_acidophilus_30SC 1 1
Pediococcus_claussenii_ATCC_BAA-344 1 1
Pediococcus_pentosaceus_ATCC_25745 1 1
Lactococcus_garvieae_ATCC_49156 1 1
Lactococcus_lactis_subsp._cremoris_MG1363 1 1
Streptococcus_sp._I-P16 1 1
Streptococcus_sp._I-G2 1 1
Streptococcus_intermedius_JTH08 1 1
Streptococcus_gallolyticus_UCN34 1 1
Streptococcus_pseudopneumoniae_IS7493 1 1
Streptococcus_pasteurianus_ATCC_43144 1 1
Streptococcus_equi_subsp._equi_4047 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1 1
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Streptococcus_macedonicus_ACA-DC_198 1 1
Streptococcus_mitis_B6 1 1
Streptococcus_uberis_0140J 1 1
Streptococcus_parauberis_KCTC_11537 1 1
Streptococcus_parasanguinis_ATCC_15912 1 1
Streptococcus_pyogenes_str._Manfredo 1 1
Streptococcus_pneumoniae_P1031 1 1
Streptococcus_agalactiae_A909 1 1
Streptococcus_mutans_NN2025 1 1
Streptococcus_thermophilus_LMD-9 1 1
Streptococcus_suis_P1/7 1 1
Streptococcus_sanguinis_SK36 1 1
Streptococcus_salivarius_57.I 1 1
Streptococcus_oralis_Uo5 1 1
Streptococcus_gordonii_str._Challis_substr._CH1 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sp._AT1b 1 1
Exiguobacterium_sibiricum_255-15 2 2
Kyrpidia_tusciae_DSM_2912 2 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Brevibacillus_brevis_NBRC_100599 1 1
Paenibacillus_sp._JDR-2 1 1
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_mucilaginosus_3016 1 1
Paenibacillus_polymyxa_M1 1 1
Bacillus_selenitireducens_MLS10 3 3
Listeria_welshimeri_serovar_6b_str._SLCC5334 1 1
Listeria_innocua_Clip11262 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 1 1
Solibacillus_silvestris_StLB046 1 1
Geobacillus_thermoglucosidasius_C56-YS93 2 2
Lysinibacillus_sphaericus_C3-41 1 1
Oceanobacillus_iheyensis_HTE831 2 2
Anoxybacillus_flavithermus_WK1 2 2
Geobacillus_thermoleovorans_CCB_US3_UF5 3 2
Geobacillus_kaustophilus_HTA426 2 2
Geobacillus_sp._GHH01 1 1
Geobacillus_sp._WCH70 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Halobacillus_halophilus_DSM_2266 1 1
Bacillus_sp._JS 1 1
Bacillus_sp._1NLA3E 1 1
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 2 2
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_halodurans_C-125 1 1
Bacillus_weihenstephanensis_KBAB4 2 2
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 3 2
Bacillus_anthracis_str._A0248 3 2
Bacillus_pseudofirmus_OF4 4 3
Bacillus_clausii_KSM-K16 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_pumilus_SAFR-032 1 1
Bacillus_megaterium_DSM_319 1 1
Bacillus_coagulans_2-6 1 1
Macrococcus_caseolyticus_JCSC5402 1 1
Staphylococcus_pseudintermedius_HKU10-03 1 1
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1 1
Staphylococcus_lugdunensis_HKU09-01 1 1
Staphylococcus_haemolyticus_JCSC1435 1 1
Staphylococcus_epidermidis_RP62A 3 2
Staphylococcus_carnosus_subsp._carnosus_TM300 1 1
Staphylococcus_aureus_subsp._aureus_JH1 1 1
Staphylococcus_aureus 1 1
Ignavibacterium_album_JCM_16511 2 1
Chlorobium_luteolum_DSM_273 1 1
Chlorobium_chlorochromatii_CaD3 1 1
Chloroherpeton_thalassium_ATCC_35110 2 1
Haliscomenobacter_hydrossis_DSM_1100 1 1
Salinibacter_ruber_M8 2 2
Rhodothermus_marinus_DSM_4252 3 3
Flexibacter_litoralis_DSM_6794 3 2
Fibrella_aestuarina 1 1
Thermovirga_lienii_DSM_17291 1 1
Aminobacterium_colombiense_DSM_12261 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Anaerobaculum_mobile_DSM_13181 1 1
Turneriella_parva_DSM_21527 1 1
Sphaerochaeta_globus_str._Buddy 1 1
Treponema_azotonutricium_ZAS-9 1 1
Thermodesulfatator_indicus_DSM_15286 1 1
Thermodesulfobacterium_sp._OPB45 1 1
Deferribacter_desulfuricans_SSM1 1 1
Marinitoga_piezophila_KA3 1 1
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Kosmotoga_olearia_TBF_19.5.1 1 1
Fervidobacterium_pennivorans_DSM_9078 1 1
Fervidobacterium_nodosum_Rt17-B1 1 1
Thermosipho_melanesiensis_BI429 1 1
Thermosipho_africanus_TCF52B 1 1
Thermotoga_lettingae_TMO 2 2
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 1 1
Thermotoga_naphthophila_RKU-10 2 2
Thermotoga_petrophila_RKU-1 2 2
Thermotoga_neapolitana_DSM_4359 1 1
Thermotoga_maritima_MSB8 1 1
Desulfurobacterium_thermolithotrophum_DSM_11699 3 2
Sulfurihydrogenibium_sp._YO3AOP1 1 1
Sulfurihydrogenibium_azorense_Az-Fu1 2 2
Persephonella_marina_EX-H1 3 3
Thermocrinis_albus_DSM_14484 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Dictyoglomus_thermophilum_H-6-12 1 1
Caldisericum_exile_AZM16c01 1 1
Candidatus_Chloracidobacterium_thermophilum_B 2 1
Thermodesulfovibrio_yellowstonii_DSM_11347 2 1
Streptobacillus_moniliformis_DSM_12112 1 1
Sebaldella_termitidis_ATCC_33386 1 1
Leptotrichia_buccalis_C-1013-b 1 1
Ilyobacter_polytropus_DSM_2926 1 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
Candidatus_Methylomirabilis_oxyfera 1 1
candidate_division_WWE3_bacterium_RAAC2_WWE3_1 2 2
Acidithiobacillus_caldus_SM-1 1 1
Sulfurovum_sp._NBC37-1 1 1
Desulfovibrio_magneticus_RS-1 1 1
Hippea_maritima_DSM_10411 2 2
Haliangium_ochraceum_DSM_14365 1 1
Myxococcus_xanthus_DK_1622 1 1
beta_proteobacterium_CB 1 1
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 1 1
Burkholderia_gladioli_BSR3 1 1
Delftia_sp._Cs1-4 1 1
Polaromonas_sp._JS666 2 2
Polaromonas_naphthalenivorans_CJ2 1 1
Acidovorax_citrulli_AAC00-1 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Rhodospirillum_centenum_SW 1 1
Azospirillum_sp._B510 1 1
Polymorphum_gilvum_SL003B-26A1 1 1
Methylobacterium_extorquens_AM1 1 1
Methylobacterium_nodulans_ORS_2060 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 1 1
Methylomicrobium_alcaliphilum 1 1
Methylococcus_capsulatus_str._Bath 1 1
Rhodanobacter_denitrificans 1 1
Spiribacter_sp._UAH-SP71 1 1
Alkalilimnicola_ehrlichii_MLHE-1 3 2
Thioalkalivibrio_sulfidophilus_HL-EbGr7 2 2
Thioalkalivibrio_sp._K90mix 1 1
Halorhodospira_halophila_SL1 1 1
Allochromatium_vinosum_DSM_180 5 3
Thiocystis_violascens_DSM_198 2 2
Nitrosococcus_watsonii_C-113 1 1
Nitrosococcus_halophilus_Nc4 3 2
Nitrosococcus_oceani_ATCC_19707 1 1
Coxiella_burnetii_Dugway_5J108-111 1 1
Shigella_flexneri_5_str._8401 1 1
Azotobacter_vinelandii_DJ 1 1
Methylophaga_sp._JAM1 2 2
Candidatus_Caldiarchaeum_subterraneum 8 6
Hyperthermus_butylicus_DSM_5456 1 1
Thermogladius_cellulolyticus_1633 1 1
Aeropyrum_pernix_K1 4 3
Staphylothermus_marinus_F1 1 1
Vulcanisaeta_moutnovskia_768-28 2 2
Vulcanisaeta_distributa_DSM_14429 1 1
Caldivirga_maquilingensis_IC-167 1 1
Pyrobaculum_sp._1860 1 1
Pyrobaculum_calidifontis_JCM_11548 3 2
Pyrobaculum_arsenaticum_DSM_13514 2 2
Pyrobaculum_oguniense_TE7 3 2
Thermoproteus_neutrophilus_V24Sta 5 3
Pyrobaculum_aerophilum_str._IM2 1 1
halophilic_archaeon_DL31 4 3
Methanosaeta_harundinacea_6Ac 1 1
Methanohalobium_evestigatum_Z-7303 1 1
Methanosphaerula_palustris_E1-9c 1 1
Methanoculleus_bourgensis_MS2 3 2
Methanoculleus_marisnigri_JR1 1 1
Methanopyrus_kandleri_AV19 9 7
Ferroglobus_placidus_DSM_10642 2 1
Archaeoglobus_profundus_DSM_5631 17 13
Archaeoglobus_veneficus_SNP6 5 2
Thermococcus_sp._4557 8 5
Thermococcus_onnurineus_NA1 5 4
Thermococcus_kodakarensis_KOD1 17 12
Thermococcus_gammatolerans_EJ3 4 2
Thermococcus_sibiricus_MM_739 11 7
Thermococcus_barophilus_MP 7 6
Pyrococcus_sp._ST04 12 10
Pyrococcus_yayanosii_CH1 7 6
Pyrococcus_horikoshii_OT3 13 11
Pyrococcus_abyssi_GE5 13 6
Pyrococcus_furiosus_COM1 13 8
Natrinema_sp._J7-2 3 1
Natrialba_magadii_ATCC_43099 5 4
Halorubrum_lacusprofundi_ATCC_49239 2 2
Haloquadratum_walsbyi_DSM_16790 9 5
Halogeometricum_borinquense_DSM_11551 3 1
Haloferax_mediterranei_ATCC_33500 5 3
Haloferax_volcanii_DS2 3 3
Halomicrobium_mukohataei_DSM_12286 1 1
Halorhabdus_utahensis_DSM_12940 4 3
Natronomonas_pharaonis_DSM_2160 4 2
Haloarcula_hispanica_ATCC_33960 3 2
Haloarcula_marismortui_ATCC_43049 4 3
Halobacterium_salinarum_R1 2 1
Halobacterium_sp._NRC-1 2 1
Methanotorris_igneus_Kol_5 10 8
Methanocaldococcus_sp._FS406-22 12 7
Methanocaldococcus_fervens_AG86 2 1
Methanocaldococcus_vulcanius_M7 11 10
methanocaldococcus_infernus_ME 6 5
Methanocaldococcus_jannaschii_DSM_2661 24 16
Methanothermococcus_okinawensis_IH1 6 4
Methanococcus_aeolicus_Nankai-3 8 6
Methanothermus_fervidus_DSM_2088 3 2
Methanothermobacter_marburgensis_str._Marburg 2 1
Acholeplasma_laidlawii_PG-8A 1 1

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Strains
Genome     Number   Proteins
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H143 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 1 1
Saccharomyces_cerevisiae_UC5 2 1
Saccharomyces_cerevisiae_PW5 2 1
Saccharomyces_cerevisiae_YJM269 2 1
Saccharomyces_cerevisiae_T7 2 1
Saccharomyces_cerevisiae_FostersB 4 2
Saccharomyces_cerevisiae_FostersO 3 2
Saccharomyces_cerevisiae_VL3 4 2
Saccharomyces_cerevisiae_Vin13 4 2
Saccharomyces_cerevisiae_LalvinQA23 3 2
Saccharomyces_cerevisiae_AWRI796 4 2
Saccharomyces_cerevisiae_Sigma1278b 4 2
Saccharomyces_cerevisiae_W303 2 1
Saccharomyces_cerevisiae_JAY291 4 3
Saccharomyces_cerevisiae_M22 2 1
Saccharomyces_cerevisiae_CLIB215 4 2
Saccharomyces_cerevisiae_YJM789_ 7 4
Saccharomyces_cerevisiae_YJM789 2 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   19 11
Batrachochytrium_dendrobatidis_JEL423_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2 2
Hordeum_vulgare_22   (Domesticated barley)   4 4
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2 1
Chroococcidiopsis_thermalis_PCC_7203 4 2
Chamaesiphon_minutus_PCC_6605 1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1 1
Synechocystis_sp._PCC_6803_substr._GT-I 1 1
Synechocystis_sp._PCC_6803 2 2
Dactylococcopsis_salina_PCC_8305 8 5
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._PCC_7002 1 1
Synechococcus_elongatus_PCC_6301 1 1
Crinalium_epipsammum_PCC_9333 1 1
Oscillatoria_nigro-viridis_PCC_7112 5 3
Oscillatoria_acuminata_PCC_6304 6 5
Cyanothece_sp._PCC_7822 2 2
Cyanothece_sp._PCC_7425 2 1
Cyanothece_sp._PCC_7424 2 2
Cyanothece_sp._ATCC_51142 1 1
Cyanobacterium_aponinum_PCC_10605 1 1
Cyanobacterium_stanieri_PCC_7202 4 3
Calothrix_parietina_Calothrix_sp._PCC_6303 2 2
Cylindrospermum_stagnale_PCC_7417 2 2
Anabaena_cylindrica_PCC_7122 3 3
Candidatus_Phytoplasma_solani_tobfin_28409 1 1
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 1 1
Candidatus_Phytoplasma_australiense 1 1
Mesoplasma_florum_W37 1 1
Spiroplasma_syrphidicola_EA-1 1 1
Spiroplasma_diminutum_CUAS-1 1 1
Spiroplasma_chrysopicola_DF-1 1 1
Spiroplasma_taiwanense_CT-1 1 1
Spiroplasma_apis_B31 1 1
Ureaplasma_parvum_serovar_3_str._ATCC_700970 1 1
Mycoplasma_leachii_PG50 1 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._Gladysdale 1 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1 1 1
Mycoplasma_cynos_C142 1 1
Mycoplasma_bovis_Hubei-1 1 1
Mycoplasma_bovis_PG45 1 1
Mycoplasma_putrefaciens_Mput9231 1 1
Mycoplasma_fermentans_JER 2 1
Mycoplasma_fermentans_PG18 2 1
Mycoplasma_agalactiae 1 1
Mycoplasma_pneumoniae_M129-B7 1 1
Mycoplasma_pneumoniae_FH 1 1
Mycoplasma_pneumoniae_M129 1 1
Mycoplasma_hyorhinis_SK76 1 1
Mycoplasma_hyorhinis_MCLD 1 1
Mycoplasma_hyorhinis_HUB-1 1 1
Mycoplasma_hyorhinis_DBS_1050 1 1
Mycoplasma_hyopneumoniae_168-L 1 1
Mycoplasma_hyopneumoniae_7422 1 1
Mycoplasma_hyopneumoniae_7448 1 1
Mycoplasma_hyopneumoniae_J 1 1
Mycoplasma_genitalium_M2321 1 1
Mycoplasma_genitalium_M2288 1 1
Mycoplasma_genitalium_M6282 1 1
Mycoplasma_genitalium_M6320 1 1
Mycoplasma_gallisepticum_NC08_2008.031-4-3P 1 1
Mycoplasma_gallisepticum_CA06_2006.052-5-2P 1 1
Mycoplasma_gallisepticum_NC06_2006.080-5-2P 1 1
Mycoplasma_gallisepticum_WI01_2001.043-13-2P 1 1
Mycoplasma_gallisepticum_NY01_2001.047-5-1P 1 1
Mycoplasma_gallisepticum_NC96_1596-4-2P 1 1
Mycoplasma_gallisepticum_NC95_13295-2-2P 1 1
Mycoplasma_gallisepticum_VA94_7994-1-7P 1 1
Mycoplasma_gallisepticum_S6 1 1
Mycoplasma_gallisepticum_str._R(high) 1 1
Mycoplasma_gallisepticum_str._R(low) 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Adlercreutzia_equolifaciens_DSM_19450 1 1
Frankia_sp._CcI3 1 1
Nocardiopsis_alba_ATCC_BAA-2165 4 4
Streptomyces_fulvissimus_DSM_40593 1 1
Streptomyces_venezuelae_ATCC_10712 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1 1
Saccharothrix_espanaensis_DSM_44229 2 2
Rhodococcus_pyridinivorans_SB3094 1 1
Nocardia_brasiliensis_ATCC_700358 1 1
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_sp._JDM601 2 2
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_sp._KMS 2 2
Mycobacterium_sp._MCS 2 2
Mycobacterium_yongonense_05-1390 1 1
Mycobacterium_intracellulare_MOTT-64 2 2
Mycobacterium_indicus_pranii_MTCC_9506 1 1
Mycobacterium_intracellulare_MOTT-02 2 2
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1 1
Mycobacterium_canettii_CIPT_140070017 2 2
Mycobacterium_canettii_CIPT_140060008 2 2
Mycobacterium_canettii_CIPT_140070008 2 2
Mycobacterium_canettii_CIPT_140070010 3 3
Mycobacterium_tuberculosis_EAI5/NITR206 2 2
Mycobacterium_tuberculosis_EAI5 2 2
Mycobacterium_tuberculosis_CAS/NITR204 2 2
Mycobacterium_tuberculosis_str._Beijing/NITR203 2 2
Mycobacterium_tuberculosis_UT205 2 2
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 2 2
Mycobacterium_tuberculosis_CTRI-2 2 2
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 2 2
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 2 2
Mycobacterium_tuberculosis_CCDC5180 2 2
Mycobacterium_tuberculosis_CCDC5079 2 2
Mycobacterium_tuberculosis_CCDC5079 2 2
Mycobacterium_tuberculosis_H37Ra 2 2
Mycobacterium_tuberculosis_str._Haarlem/NITR202 2 2
Mycobacterium_tuberculosis_str._Haarlem 2 2
Mycobacterium_tuberculosis_F11 2 2
Mycobacterium_tuberculosis_H37Rv 2 2
Mycobacterium_tuberculosis_CDC1551 2 2
Mycobacterium_bovis_AF2122/97 2 2
Mycobacterium_bovis_BCG_str._Korea_1168P 2 2
Mycobacterium_bovis_BCG_str._Mexico 2 2
Mycobacterium_bovis_BCG_str._Tokyo_172 2 2
Mycobacterium_gilvum_Spyr1 2 2
Mycobacterium_smegmatis_str._MC2_155 1 1
Mycobacterium_leprae_TN 3 3
Mycobacterium_kansasii_ATCC_12478 1 1
Tropheryma_whipplei_str._Twist 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2 2
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2 2
Bifidobacterium_longum_subsp._longum_JCM_1217 2 2
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1 1
Bifidobacterium_animalis_subsp._lactis_B420 1 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1 1
Bifidobacterium_animalis_subsp._lactis_V9 1 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1 1
Bifidobacterium_animalis_subsp._lactis_AD011 1 1
Deinococcus_peraridilitoris_DSM_19664 2 2
Thermus_oshimai_JL-2 1 1
Thermus_thermophilus_JL-18 2 1
Thermus_thermophilus_SG0.5JP17-16 5 2
Thermus_thermophilus_HB8 5 2
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1 1
Erysipelothrix_rhusiopathiae_SY1027 1 1
Eubacterium_siraeum_V10Sc8a 1 1
Clostridium_thermocellum_DSM_1313 2 2
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1 1
Ruminococcus_champanellensis_18P13 1 1
Sulfobacillus_acidophilus_TPY 1 1
Clostridium_acidurici_9a 1 1
Desulfosporosinus_meridiei_DSM_13257 1 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 2 2
Desulfotomaculum_gibsoniae_DSM_7213 2 2
Clostridium_difficile_BI1 1 1
Clostridium_difficile_R20291 1 1
Clostridium_difficile_CD196 1 1
Coprococcus_catus_GD/7 1 1
Roseburia_intestinalis_XB6B4 1 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1 1
Clostridium_sp._SY8519 1 1
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_autoethanogenum_DSM_10061 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1
Clostridium_kluyveri_NBRC_12016 2 2
Clostridium_tetani_genome_12124569 1 1
Clostridium_perfringens_SM101 1 1
Clostridium_perfringens_str._13 1 1
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_H04402_065 2 2
Clostridium_botulinum_BKT015925 2 2
Clostridium_botulinum_F_str._230613 2 2
Clostridium_botulinum_F_str._Langeland 2 2
Clostridium_botulinum_E3_str._Alaska_E43 1 1
Clostridium_botulinum_B1_str._Okra 2 2
Clostridium_botulinum_Ba4_str._657 1 1
Clostridium_botulinum_A2_str._Kyoto 2 2
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_botulinum_A_str._Hall 1 1
Clostridium_botulinum_A_str._ATCC_19397 1 1
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 2 2
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Thermacetogenium_phaeum_DSM_12270 2 2
Thermoanaerobacter_sp._X513 2 2
Halobacteroides_halobius_DSM_5150 4 2
Carnobacterium_maltaromaticum_LMA28 1 1
Melissococcus_plutonius_ATCC_35311 1 1
Enterococcus_mundtii_QU_25 1 1
Enterococcus_casseliflavus_EC20 1 1
Enterococcus_faecium_Aus0085 1 1
Enterococcus_faecium_NRRL_B-2354 1 1
Enterococcus_faecium_DO 1 1
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Leuconostoc_carnosum_JB16 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 1 1
Leuconostoc_gelidum_JB7 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_W56 1 1
Lactobacillus_casei_LC2W 1 1
Lactobacillus_casei_BD-II 1 1
Lactobacillus_casei_BL23 1 1
Lactobacillus_casei_str._Zhang 1 1
Lactobacillus_rhamnosus_LOCK908 1 1
Lactobacillus_rhamnosus_LOCK900 1 1
Lactobacillus_rhamnosus_ATCC_8530 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_johnsonii_N6.2 1 1
Lactobacillus_johnsonii_DPC_6026 1 1
Lactobacillus_johnsonii_NCC_533 1 1
Lactobacillus_salivarius_UCC118 1 1
Lactobacillus_fermentum_F-6 1 1
Lactobacillus_fermentum_CECT_5716 1 1
Lactobacillus_amylovorus_GRL_1112 1 1
Lactobacillus_reuteri_TD1 1 1
Lactobacillus_reuteri_I5007 1 1
Lactobacillus_reuteri_JCM_1112 1 1
Lactobacillus_reuteri_SD2112 1 1
Lactobacillus_plantarum_16 1 1
Lactobacillus_plantarum_ZJ316 1 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1 1
Lactobacillus_plantarum_WCFS1 1 1
Lactobacillus_helveticus_R0052 1 1
Lactobacillus_helveticus_H10 1 1
Lactobacillus_helveticus_CNRZ32 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 1 1
Lactobacillus_brevis_KB290 1 1
Lactobacillus_acidophilus_La-14 1 1
Lactobacillus_acidophilus_NCFM 1 1
Pediococcus_pentosaceus_SL4 1 1
Lactococcus_garvieae_Lg2 1 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1 1
Lactococcus_lactis_subsp._lactis_IO-1 1 1
Lactococcus_lactis_subsp._lactis_CV56 1 1
Lactococcus_lactis_subsp._lactis_KF147 1 1
Lactococcus_lactis_subsp._lactis_Il1403 1 1
Lactococcus_lactis_subsp._cremoris_KW2 1 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1 1
Lactococcus_lactis_subsp._cremoris_A76 1 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1 1
Lactococcus_lactis_subsp._cremoris_SK11 1 1
Streptococcus_constellatus_subsp._pharyngis_C1050 1 1
Streptococcus_constellatus_subsp._pharyngis_C818 1 1
Streptococcus_constellatus_subsp._pharyngis_C232 1 1
Streptococcus_intermedius_B196 1 1
Streptococcus_intermedius_C270 1 1
Streptococcus_anginosus_C238 1 1
Streptococcus_anginosus_C1051 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 1 1
Streptococcus_lutetiensis_033 1 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1 1
Streptococcus_equi_subsp._zooepidemicus 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1 1
Streptococcus_oligofermentans_AS_1.3089 1 1
Streptococcus_iniae_SF1 1 1
Streptococcus_parasanguinis_FW213 1 1
Streptococcus_pyogenes_HSC5 1 1
Streptococcus_pyogenes_A20 1 1
Streptococcus_pyogenes_MGAS1882 1 1
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_Alab49 1 1
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pyogenes_MGAS10270 1 1
Streptococcus_pyogenes_MGAS2096 1 1
Streptococcus_pyogenes_MGAS9429 1 1
Streptococcus_pyogenes_MGAS6180 1 1
Streptococcus_pyogenes_NZ131 1 1
Streptococcus_pyogenes_MGAS8232 1 1
Streptococcus_pyogenes_MGAS10394 1 1
Streptococcus_pyogenes_MGAS315 1 1
Streptococcus_pyogenes_SSI-1 1 1
Streptococcus_pyogenes_M1_476 1 1
Streptococcus_pyogenes_MGAS5005 1 1
Streptococcus_pyogenes_M1_GAS 1 1
Streptococcus_pneumoniae_A026 1 1
Streptococcus_pneumoniae_ST556 1 1
Streptococcus_pneumoniae_SPNA45 1 1
Streptococcus_pneumoniae_SPN994039 1 1
Streptococcus_pneumoniae_SPN994038 1 1
Streptococcus_pneumoniae_SPN034183 1 1
Streptococcus_pneumoniae_SPN034156 1 1
Streptococcus_pneumoniae_INV104 1 1
Streptococcus_pneumoniae_INV200 1 1
Streptococcus_pneumoniae_OXC141 1 1
Streptococcus_pneumoniae_gamPNI0373 1 1
Streptococcus_pneumoniae_AP200 1 1
Streptococcus_pneumoniae_ATCC_700669 1 1
Streptococcus_pneumoniae_TCH8431/19A 1 1
Streptococcus_pneumoniae_CGSP14 1 1
Streptococcus_pneumoniae_G54 1 1
Streptococcus_pneumoniae_JJA 1 1
Streptococcus_pneumoniae_70585 1 1
Streptococcus_pneumoniae_Hungary19A-6 1 1
Streptococcus_pneumoniae_Taiwan19F-14 1 1
Streptococcus_pneumoniae_D39 1 1
Streptococcus_pneumoniae_670-6B 1 1
Streptococcus_pneumoniae_R6 1 1
Streptococcus_pneumoniae_TIGR4 1 1
Streptococcus_agalactiae_ILRI112 1 1
Streptococcus_agalactiae_ILRI005 1 1
Streptococcus_agalactiae_09mas018883 1 1
Streptococcus_agalactiae_2-22 1 1
Streptococcus_agalactiae_SA20-06 1 1
Streptococcus_agalactiae_GD201008-001 1 1
Streptococcus_agalactiae_NEM316 1 1
Streptococcus_agalactiae_2603V/R 1 1
Streptococcus_mutans_GS-5 1 1
Streptococcus_mutans_LJ23 1 1
Streptococcus_mutans_UA159 1 1
Streptococcus_thermophilus_MN-ZLW-002 1 1
Streptococcus_thermophilus_JIM_8232 1 1
Streptococcus_thermophilus_ND03 1 1
Streptococcus_thermophilus_CNRZ1066 1 1
Streptococcus_thermophilus_LMG_18311 1 1
Streptococcus_suis_T15 1 1
Streptococcus_suis_TL13 1 1
Streptococcus_suis_SC070731 1 1
Streptococcus_suis_S735 1 1
Streptococcus_suis_ST3 1 1
Streptococcus_suis_D9 1 1
Streptococcus_suis_SS12 1 1
Streptococcus_suis_D12 1 1
Streptococcus_suis_ST1 1 1
Streptococcus_suis_A7 1 1
Streptococcus_suis_JS14 1 1
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 1 1
Streptococcus_suis_98HAH33 1 1
Streptococcus_suis_05ZYH33 1 1
Streptococcus_salivarius_CCHSS3 1 1
Streptococcus_salivarius_JIM8777 1 1
Exiguobacterium_antarcticum_B7 2 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1
Thermobacillus_composti_KWC4 1 1
Paenibacillus_sp._Y412MC10 1 1
Paenibacillus_mucilaginosus_KNP414 1 1
Paenibacillus_mucilaginosus_K02 1 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1
Paenibacillus_polymyxa_CR1 1 1
Paenibacillus_polymyxa_SC2 1 1
Paenibacillus_polymyxa_E681 1 1
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_N53-1 1 1
Listeria_monocytogenes_La111 1 1
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_M7 1 1
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_SLCC7179 1 1
Listeria_monocytogenes_SLCC2540 1 1
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_08-5578 1 1
Listeria_monocytogenes_08-5923 1 1
Listeria_monocytogenes_L99 1 1
Listeria_monocytogenes_HCC23 1 1
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_J0161 1 1
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Listeria_monocytogenes_EGD-e 1 1
Geobacillus_sp._C56-T3 2 2
Geobacillus_sp._Y4.1MC1 3 3
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Amphibacillus_xylanus_NBRC_15112 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 2 2
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 2 2
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_licheniformis_9945A 1 1
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 6 4
Bacillus_thuringiensis_MC28 3 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 3 2
Bacillus_thuringiensis_YBT-1518 3 2
Bacillus_thuringiensis_Bt407 3 2
Bacillus_thuringiensis_serovar_konkukian_str._97-27 3 2
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 3 2
Bacillus_thuringiensis_BMB171 3 2
Bacillus_thuringiensis_serovar_finitimus_YBT-020 3 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 3 2
Bacillus_cereus_FRI-35 3 2
Bacillus_cereus_biovar_anthracis_str._CI 2 2
Bacillus_cereus_AH820 3 2
Bacillus_cereus_AH187 3 2
Bacillus_cereus_B4264 4 3
Bacillus_cereus_G9842 3 2
Bacillus_cereus_Q1 3 2
Bacillus_cereus_F837/76 2 2
Bacillus_cereus_NC7401 3 2
Bacillus_cereus_E33L 1 1
Bacillus_cereus_ATCC_14579 3 2
Bacillus_cereus_ATCC_10987 1 1
Bacillus_anthracis_str._H9401 3 2
Bacillus_anthracis_str._CDC_684 3 2
Bacillus_anthracis_str._'Ames_Ancestor' 3 2
Bacillus_anthracis_str._Sterne 3 2
Bacillus_anthracis_str._Ames 3 2
Bacillus_megaterium_WSH-002 1 1
Bacillus_megaterium_QM_B1551 1 1
Bacillus_coagulans_36D1 1 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 1 1
Staphylococcus_pseudintermedius_ED99 1 1
Staphylococcus_pasteuri_SP1 1 1
Staphylococcus_lugdunensis_N920143 1 1
Staphylococcus_warneri_SG1 1 1
Staphylococcus_epidermidis_ATCC_12228 1 1
Staphylococcus_aureus_CA-347 1 1
Staphylococcus_aureus_Bmb9393 1 1
Staphylococcus_aureus_M1 1 1
Staphylococcus_aureus_08BA02176 1 1
Staphylococcus_aureus_ST228/18412 1 1
Staphylococcus_aureus_ST228/18341 1 1
Staphylococcus_aureus_ST228/16125 1 1
Staphylococcus_aureus_ST228/16035 1 1
Staphylococcus_aureus_ST228/15532 1 1
Staphylococcus_aureus_ST228/10497 1 1
Staphylococcus_aureus_ST228/10388 1 1
Staphylococcus_aureus_04-02981 1 1
Staphylococcus_aureus_RF122 1 1
Staphylococcus_aureus_subsp._aureus_Z172 3 2
Staphylococcus_aureus_subsp._aureus_6850 1 1
Staphylococcus_aureus_subsp._aureus_SA957 1 1
Staphylococcus_aureus_subsp._aureus_CN1 1 1
Staphylococcus_aureus_subsp._aureus_SA40 1 1
Staphylococcus_aureus_subsp._aureus_11819-97 1 1
Staphylococcus_aureus_subsp._aureus_M013 1 1
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1 1
Staphylococcus_aureus_subsp._aureus_VC40 1 1
Staphylococcus_aureus_subsp._aureus_T0131 1 1
Staphylococcus_aureus_subsp._aureus_LGA251 1 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1 1
Staphylococcus_aureus_subsp._aureus_JKD6159 1 1
Staphylococcus_aureus_subsp._aureus_ED133 1 1
Staphylococcus_aureus_subsp._aureus_ED98 1 1
Staphylococcus_aureus_subsp._aureus_TW20 3 2
Staphylococcus_aureus_subsp._aureus_55/2053 1 1
Staphylococcus_aureus_subsp._aureus_TCH60 1 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1 1
Staphylococcus_aureus_subsp._aureus_71193 1 1
Staphylococcus_aureus_subsp._aureus_S0385 1 1
Staphylococcus_aureus_subsp._aureus_str._Newman 1 1
Staphylococcus_aureus_subsp._aureus_Mu3 1 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1 1
Staphylococcus_aureus_subsp._aureus_JH9 1 1
Staphylococcus_aureus_subsp._aureus_MSSA476 1 1
Staphylococcus_aureus_subsp._aureus_MRSA252 1 1
Staphylococcus_aureus_subsp._aureus_MW2 1 1
Staphylococcus_aureus_subsp._aureus_N315 1 1
Staphylococcus_aureus_subsp._aureus_Mu50 1 1
Staphylococcus_aureus_subsp._aureus_COL 1 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1 1
Salinibacter_ruber_DSM_13855 2 2
Rhodothermus_marinus_SG0.5JP17-172 3 2
Thermotoga_maritima_MSB8 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1 1
Burkholderia_cenocepacia_MC0-3 1 1
Thioalkalivibrio_nitratireducens_DSM_14787 1 1
Coxiella_burnetii_CbuK_Q154 1 1
Coxiella_burnetii_CbuG_Q212 1 1
Coxiella_burnetii_RSA_331 1 1
Coxiella_burnetii_RSA_493 1 1
Shigella_flexneri_2002017 1 1
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 1 1
Escherichia_coli_Xuzhou21 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Azotobacter_vinelandii_CA6 1 1
Azotobacter_vinelandii_CA 1 1
Acinetobacter_baumannii_ZW85-1 1 1
Acinetobacter_baumannii_MDR-TJ 1 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 3 2
Archaeoglobus_sulfaticallidus_PM70-1 1 1
Thermococcus_sp._AM4 12 10
Thermococcus_sp._CL1 9 5
Thermococcus_litoralis_DSM_5473 18 13
Pyrococcus_sp._NA2 13 9
Pyrococcus_furiosus_DSM_3638 13 8
Ferroplasma_acidarmanus_fer1 1 1
Natrinema_pellirubrum_DSM_15624 5 4
Natronococcus_occultus_SP4 5 4
Natronobacterium_gregoryi_SP2 1 1
Haloquadratum_walsbyi_C23 7 4
Halorhabdus_tiamatea_SARL4B 10 5
Natronomonas_moolapensis_8.8.11 6 3
Haloarcula_hispanica_N601 3 2

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Longest transcript per gene
Genome     Number   Proteins
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   19 11
Arabidopsis_thaliana_10   (Thale cress)   1 1

Others
Genome     Number   Proteins
Lotus_japonicus__(Early_assembly) 3 2
Malus_x_domestica_(Duplicate)   (Apple)   1 1
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
Nicotiana_benthamiana_0.4.4_(Early_draft) 2 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
Acholeplasma_laidlawii_PG-8A_(duplicate) 1 1
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 2 2
NCBI_plasmid_sequences_(Plasmids) 28 24
Uniprot_2018_03_genome 22527 18275
PDB_chains_(SCOP_1.75)_(PDB) 26 18
NCBI_2017_08_genome 53089 51274
TargetDB__(Targets) 66 55
NCBI_viral_sequences_(Viral) 126 116
Protein_Data_Bank_(all_PDB_sequenc) 344 229
UniProt__viral_sequences_(Viral) 40 36
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 641 641
STRING_v9.0.5_(STRING) 745 613

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