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Domain combinations for PYP-like sensor domain (PAS domain) superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a PYP-like sensor domain (PAS domain) domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   186 126
Pan_troglodytes_76_2.1.4   (Chimpanzee)   52 34
Gorilla_gorilla_76_3.1   (Western gorilla)   70 45
Pongo_abelii_76_2   (Sumatran orangutan)   49 32
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   56 37
Papio_anubis_76   (Olive baboon)   65 42
Macaca_mulatta_76_1   (Rhesus monkey)   106 68
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   115 80
Otolemur_garnettii_76_3   (Small-eared galago)   51 34
Microcebus_murinus_76_1   (Gray mouse lemur)   44 31
Rattus_norvegicus_76_5.0   (Norway rat)   59 38
Mus_musculus_76_38   (House mouse)   90 61
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   37 28
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   49 31
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   47 31
Cavia_porcellus_76_3   (Domestic guinea pig)   52 34
Oryctolagus_cuniculus_76_2   (Rabbit)   56 35
Ochotona_princeps_76   (American pika)   36 28
Tupaia_belangeri_76   (Northern tree shrew)   37 28
Sus_scrofa_76_10.2   (Pig)   63 42
Bos_taurus_76_3.1   (Cattle)   49 33
Ovis_aries_76_3.1   (Sheep)   57 36
Vicugna_pacos_76_1   (Alpaca)   26 18
Tursiops_truncatus_76_1   (Bottlenose dolphin)   46 32
Mustela_putorius_furo_76_1.0   (Domestic ferret)   54 37
Ailuropoda_melanoleuca_76_1   (Giant panda)   48 33
Canis_familiaris_76_3.1   (Dog)   69 47
Felis_catus_76_6.2   (Domestic cat)   53 36
Equus_caballus_76_2   (Horse)   55 37
Myotis_lucifugus_76_2.0   (Little brown bat)   46 31
Pteropus_vampyrus_76_1   (Large flying fox)   49 33
Sorex_araneus_76_1   (European shrew)   27 19
Erinaceus_europaeus_76   (Western European hedgehog)   27 22
Procavia_capensis_76_1   (Cape rock hyrax)   33 27
Loxodonta_africana_76_3   (African savanna elephant)   65 41
Echinops_telfairi_76   (Small Madagascar hedgehog)   36 22
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   60 38
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   28 20
Macropus_eugenii_76_1.0   (Tammar wallaby)   43 32
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   71 45
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   51 32
Ornithorhynchus_anatinus_76_5   (Platypus)   52 37
Saccoglossus_kowalevskii_v3.0 50 31
Petromyzon_marinus_76_7.0   (Sea lamprey)   35 23
Meleagris_gallopavo_76_2   (Turkey)   58 36
Gallus_gallus_76_4   (Chicken)   52 32
Anas_platyrhynchos_76_1.0   (Mallard)   45 29
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   48 33
Ficedula_albicollis_76_1.0   (Collared flycatcher)   45 29
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   63 41
Anolis_carolinensis_76_2.0   (Green anole)   49 33
Xenopus_laevis_   (African clawed frog)   100 53
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   58 35
Latimeria_chalumnae_76_1   (Coelacanth)   68 45
Lepisosteus_oculatus_76   (Spotted gar)   78 51
Gadus_morhua_76_1   (Atlantic cod)   64 44
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   86 55
Takifugu_rubripes_76_4   (Torafugu)   275 180
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   65 43
Oryzias_latipes_76_1   (Japanese medaka)   74 50
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   69 45
Poecilia_formosa_76   (Amazon molly)   72 47
Oreochromis_niloticus_76_1.0   (Nile tilapia)   99 61
Astyanax_mexicanus_76   (Mexican tetra)   83 54
Danio_rerio_76_9   (Zebrafish)   122 77
Oikopleura_dioica 7 6
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   26 15
Ciona_intestinalis_76   (Vase tunicate)   11 7
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   32 21
Adineta_vaga 52 34
Octopus_bimaculoides_280 24 17
Crassostrea_gigas_22   (Pacific oyster)   30 19
Lottia_gigantea_   (Owl limpet)   25 15
Helobdella_robusta_ 26 21
Capitella_sp._I_ 35 25
Danaus_plexippus_OGS1.0   (Monarch butterfly)   28 18
Heliconius_melpomene_   (Postman butterfly)   16 11
Bombyx_mori_   (Domestic silkworm)   18 14
Nasonia_vitripennis_   (Jewel wasp)   21 13
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   78 50
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   24 14
Linepithema_humile_v1.1   (Argentine ant)   23 15
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   18 13
Solenopsis_invicta_v.2.2.3   (Red fire ant)   17 12
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   22 13
Atta_cephalotes_v1.1 20 14
Camponotus_floridanus_v3.3   (Florida carpenter ant)   23 14
Lucilia_cuprina   (Australian sheep blowfly)   24 14
Drosophila_grimshawi_1.3 29 16
Drosophila_willistoni_1.3 28 16
Drosophila_pseudoobscura_2.13 27 15
Drosophila_persimilis_1.3 22 13
Drosophila_suzukii 25 15
Drosophila_yakuba_1.3 28 16
Drosophila_simulans_1.3 25 14
Drosophila_sechellia_1.3 28 16
Drosophila_melanogaster_76_5   (Fruit fly)   95 58
Drosophila_erecta_1.3 28 16
Drosophila_ananassae_1.3 28 16
Drosophila_virilis_1.2 27 15
Drosophila_mojavensis_1.3 25 14
Megaselia_scalaris_22 5 4
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   35 19
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   25 16
Anopheles_darlingi_22   (American malaria mosquito)   18 13
Anopheles_gambiae_49_3j   (African malaria mosquito)   31 20
Tribolium_castaneum_3.0   (Red flour beetle)   25 16
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   26 15
Acyrthosiphon_pisum_   (Pea aphid)   20 11
Rhodnius_prolixus_22 19 12
Daphnia_pulex_   (Common water flea)   29 17
Strigamia_maritima_22 22 13
Sarcoptes_scabiei 9 7
Tetranychus_urticae_   (Two-spotted spider mite)   25 16
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   22 16
Pristionchus_pacificus_ 8 7
Meloidogyne_incognita_   (Southern root-knot nematode)   3 2
Meloidogyne_hapla_ 5 5
Onchocerca_volvulus_22 14 9
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   23 15
Caenorhabditis_japonica_ 21 14
Caenorhabditis_brenneri_ 18 12
Caenorhabditis_remanei_ 13 8
Caenorhabditis_elegans_76_235   (Roundworm)   27 17
Caenorhabditis_briggsae_2 12 8
Trichinella_spiralis_22 14 10
Hymenolepis_microstoma_ 8 7
Echinococcus_multilocularis_ 7 6
Echinococcus_granulosus_ 7 6
Taenia_solium_   (Pork tapeworm)   6 5
Schistosoma_mansoni_ 14 10
Mnemiopsis_leidyi   (Sea walnut)   7 4
Thelohanellus_kitauei 4 4
Acropora_digitifera_v1.0 19 14
Nematostella_vectensis_1.0   (Starlet sea anemone)   30 20
Hydra_vulgaris 9 7
Amphimedon_queenslandica 14 9
Trichoplax_adhaerens_ 16 12
Monosiga_brevicollis_ 5 5
Sphaeroforma_arctica_JP610_ 18 17
Capsaspora_owczarzaki_ATCC_30864_ 24 18
Conidiobolus_coronatus_NRRL28638_v1.0 13 8
Mortierella_verticillata_NRRL_6337_ 11 9
Phycomyces_blakesleeanus_ 17 11
Rhizopus_oryzae_RA_99-880_ 25 16
Mucor_circinelloides_ 19 13
Rhizomucor_miehei_CAU432_ 14 9
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 10 8
Ustilago_maydis_ 8 7
Mixia_osmundae_IAM_14324_v1.0 16 13
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 15 13
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 8 6
Melampsora_laricis-populina_ 11 9
Rhodotorula_graminis_WP1_v1.0 18 14
Sporobolomyces_roseus_IAM_13481_ 14 10
Microbotryum_violaceum_22 16 12
Wallemia_sebi_v1.0 5 5
Sphaerobolus_stellatus_v1.0 10 9
Piloderma_croceum_F_1598_v1.0 9 7
Serpula_lacrymans_var._lacrymans_S7.9_ 4 4
Coniophora_puteana 8 6
Hydnomerulius_pinastri_v2.0 8 7
Paxillus_rubicundulus_Ve08.2h10_v1.0 7 6
Pisolithus_microcarpus_441_v1.0 7 6
Pisolithus_tinctorius_Marx_270_v1.0 6 5
Scleroderma_citrinum_Foug_A_v1.0 7 6
Coprinopsis_cinerea_okayama7_130_v3 7 6
Pleurotus_ostreatus_   (Oyster mushroom)   5 4
Amanita_thiersii_Skay4041_v1.0 7 5
Amanita_muscaria_Koide_v1.0   (Fly agaric)   6 5
Galerina_marginata_v1.0 6 5
Hebeloma_cylindrosporum_h7_v2.0 5 4
Laccaria_bicolor_S238N-H82_ 3 3
Agaricus_bisporus_var._bisporus_ 6 5
Schizophyllum_commune_ 10 9
Stereum_hirsutum_FP-91666_SS1__v1.0 11 10
Heterobasidion_annosum_ 8 6
Gloeophyllum_trabeumv1.0 7 6
Punctularia_strigosozonata_v1.0 11 9
Sebacina_vermifera_MAFF_305830_v1.0 10 9
Fomitiporia_mediterranea_v1.0 8 6
Tulasnella_calospora_AL13/4D_v1.0 9 7
Postia_placenta_ 6 6
Wolfiporia_cocos_MD-104_SS10__v1.0 9 7
Fomitopsis_pinicolav1.0 8 7
Fomitopsis_pinicola_FP-58527_SS1_v3.0 9 7
Phanerochaete_chrysosporium_RP-78_2.1 5 5
Dichomitus_squalens 8 7
Trametes_versicolor_v1.0 5 4
Tremella_mesenterica_   (Witches' butter)   8 6
Daldinia_eschscholzii_EC12_v1.0 18 12
Apiospora_montagnei_NRRL_25634_v1.0 35 24
Magnaporthe_poae_ATCC_64411_22 13 10
Magnaporthe_grisea_70-15_ 18 14
Podospora_anserina_ 17 13
Sporotrichum_thermophile_ATCC_42464_ 15 9
Thielavia_terrestris_NRRL_8126_ 14 9
Chaetomium_globosum_CBS_148.51_ 14 9
Neurospora_tetrasperma_ 17 13
Neurospora_discreta_FGSC_8579_ 16 12
Neurospora_crassa_OR74A_ 18 13
Cryphonectria_parasitica_   (Chestnut blight fungus)   19 15
Verticillium_albo-atrum_VaMs.102_ 14 10
Verticillium_dahliae_VdLs.17_ 18 14
Acremonium_alcalophilumv_1.0 14 10
Glomerella_graminicola_22 18 13
Fusarium_graminearum_ 16 11
Nectria_haematococca_mpVI_ 18 14
Fusarium_oxysporum_f._sp._lycopersici_4286_ 24 16
Fusarium_verticillioides_7600_ 20 15
Trichoderma_asperellum_CBS_433.97_v1.0 13 9
Trichoderma_atroviride_ 11 9
Trichoderma_citrinoviride_v1.0 17 13
Trichoderma_reesei_1.2 14 9
Trichoderma_virens_Gv29-8_ 12 9
Trichoderma_longibrachiatum_ATCC_18648_v1.0 11 8
Trichoderma_harzianum_CBS_226.95_v1.0 12 9
Amorphotheca_resinae_v1.0   (Creosote fungus)   13 10
Botrytis_cinerea_B05.10_ 19 16
Sclerotinia_sclerotiorum_ 22 18
Blumeria_graminis_22 14 10
Didymella_exigua_CBS_183.55_v1.0 26 19
Leptosphaeria_maculans_22 19 15
Setosphaeria_turcica_v1.0 25 17
Cochliobolus_miyabeanus_ATCC_44560_v1.0 23 17
Cochliobolus_victoriae_FI3_v1.0 23 17
Cochliobolus_carbonum_26-R-13_v1.0 24 17
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   23 17
Alternaria_brassicicola_ 21 15
Cochliobolus_lunatus_m118_v2.0 23 16
Pyrenophora_teres_f._teres_22 25 18
Pyrenophora_tritici-repentis_ 24 18
Stagonospora_nodorum_ 24 19
Mycosphaerella_graminicola_IPO323_ 22 18
Zasmidium_cellare_ATCC_36951_v1.0 22 17
Dothistroma_septosporum 23 19
Septoria_musiva_v1.0 19 16
Mycosphaerella_fijiensis_CIRAD86_ 18 14
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 41 29
Paracoccidioides_brasiliensis_Pb18_ 8 6
Coccidioides_posadasii_RMSCC_3488_ 5 4
Coccidioides_immitis_RS_ 6 4
Ajellomyces_dermatitidis_SLH14081_ 8 5
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 7 5
Microsporum_canis_CBS_113480_ 3 3
Trichophyton_equinum_CBS_127.97_ 4 3
Trichophyton_verrucosum_HKI_0517_ 3 2
Arthroderma_benhamiae_CBS_112371_ 3 2
Trichophyton_tonsurans_CBS_112818_ 4 3
Trichophyton_rubrum_CBS_118892_ 4 3
Uncinocarpus_reesii_1704_ 3 2
Aspergillus_zonatus_v1.0 15 11
Penicillium_chrysogenum_Wisconsin_54-1255_ 14 10
Penicillium_chrysogenum_v1.0 15 10
Aspergillus_acidus_v1.0 13 8
Aspergillus_fumigatus_Af293 11 7
Aspergillus_brasiliensis_v1.0 13 8
Aspergillus_nidulans_FGSC_A4_ 11 7
Aspergillus_sydowii_v1.0 15 10
Aspergillus_versicolor_v1.0 10 7
Aspergillus_glaucus 11 8
Aspergillus_carbonarius_ITEM_5010_ 12 8
Neosartorya_fischeri_NRRL_181_ 12 8
Aspergillus_terreus_NIH2624_ 12 8
Aspergillus_tubingensis_v1.0 13 8
Aspergillus_wentii_v1.0 13 9
Aspergillus_oryzae_RIB40_ 10 8
Aspergillus_niger_22 13 8
Aspergillus_niger_ATCC_1015_ 12 7
Aspergillus_flavus_NRRL3357_ 12 8
Aspergillus_clavatus_NRRL_1_ 12 8
Penicillium_marneffei_ATCC_18224_ 14 8
Tuber_melanosporum_Mel28_22 11 8
Tuber_melanosporum_Vittad_   (Perigord truffle)   11 8
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 2 2
Candida_albicans_SC5314 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Debaromyces_hansenii 1 1
Wickerhamomyces_anomalus 2 2
Pichia_pastoris_GS115_ 1 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 5 4
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 2 2
Candida_glabrata_CBS138 3 3
Kluyveromyces_thermotolerans_CBS_6340 2 2
Lachancea_kluyveri_ 3 3
Kluyveromyces_waltii 3 3
Ashbya_gossypii_ATCC_10895_ 2 2
Zygosaccharomyces_rouxii_ 3 3
Saccharomyces_mikatae_MIT 2 2
Saccharomyces_paradoxus_MIT 3 3
Saccharomyces_cerevisiae_76   (Baker's yeast)   3 3
Saccharomyces_bayanus_MIT 2 2
Kluyveromyces_lactis 3 3
Schizosaccharomyces_cryophilus_OY26_22 5 4
Schizosaccharomyces_octosporus_yFS286_ 5 4
Schizosaccharomyces_japonicus_yFS275_ 7 4
Schizosaccharomyces_pombe   (Fission yeast)   5 4
Catenaria_anguillulae_PL171_v1.0 27 20
Allomyces_macrogynus_ATCC_38327_ 30 28
Spizellomyces_punctatus_DAOM_BR117_ 34 21
Dictyostelium_discoideum 17 13
Dictyostelium_purpureum_ 14 11
Selaginella_moellendorffii_ 30 17
Pinus_taeda   (Loblolly pine)   25 17
Picea_abies   (Norway spruce)   11 7
Eucalyptus_grandis_v201   (Rose gum)   51 27
Theobroma_cacao_B97-61/B2_v1   (Cacao)   22 11
Gossypium_raimondii_v221 103 57
Citrus_clementina_v165 68 46
Citrus_sinensis_v154   (Sweet orange)   90 49
Thellungiella_halophila_v173 44 24
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   35 20
Capsella_rubella_v183 32 19
Arabidopsis_lyrata_   (Lyrate rockcress)   35 22
Arabidopsis_thaliana_10   (Thale cress)   52 31
Carica_papaya_   (Papaya)   17 11
Medicago_truncatula_   (Barrel medic)   48 26
Phaseolus_vulgaris_v186   (French bean)   54 28
Glycine_max_v109   (Soybean)   62 35
Cucumis_sativus_v122   (Cucumber)   46 23
Fragaria_vesca_   (Wild strawberry)   29 14
Malus_domestica_v196   (Apple)   48 27
Prunus_persica_v139   (Peach)   25 12
Linum_usitatissimum_v200   (Flax)   52 31
Manihot_esculenta_v147   (Cassava)   28 16
Populus_trichocarpa_v156   (Black cottonwood)   32 18
Vitis_vinifera_   (Wine grape)   21 11
Mimulus_guttatus_v140   (Spotted monkey flower)   24 13
Solanum_lycopersicum_v.2.3   (Tomato)   31 17
Solanum_tuberosum_   (Potato)   50 31
Actinidia_chinensis_Hongyang_ 47 25
Aquilegia_coerulea_v195 63 33
Triticum_urartu_22 22 16
Triticum_aestivum_22   (Bread wheat)   68 47
Aegilops_tauschii_22 21 15
Brachypodium_distachyon_   (Stiff brome)   28 16
Oryza_barthii_22   (African wild rice)   24 15
Oryza_meridionalis_22 33 19
Oryza_glumaepatula_22 41 22
Oryza_glaberrima   (African rice)   18 11
Oryza_punctata_22 30 17
Oryza_nivara_22 54 29
Oryza_brachyantha_22   (Malo sina)   18 12
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   52 31
Oryza_sativa_v193   (Rice)   52 31
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   28 19
Panicum_virgatum_v202   (Switchgrass)   51 29
Setaria_italica_v164   (Foxtail millet)   66 34
Zea_mays_subsp._mays_   (Maize)   49 31
Zea_mays_v181   (Maize)   46 29
Sorghum_bicolor_   (Sorghum)   28 14
Musa_balbisiana   (Balbis banana)   31 20
Musa_acuminata_22   (Wild Malaysian banana)   28 18
Amborella_trichopoda_22 20 12
Physcomitrella_patens 51 28
Coccomyxa_subellipsoidea_sp._C-169_v2 15 8
Asterochloris_sp._Cgr/DA1pho_v1.0 12 10
Chlorella_variabilis_sp._NC64A_ 12 7
Chlorella_vulgaris_ 14 8
Volvox_carteri_f._nagariensis_ 22 19
Volvox_carteri_v199 21 17
Chlamydomonas_reinhardtii_4.0 24 23
Ostreococcus_sp._RCC809_ 4 3
Ostreococcus_lucimarinus_CCE9901_ 4 3
Ostreococcus_tauri_ 6 4
Bathycoccus_prasinos_ 5 4
Micromonas_sp._RCC299_ 6 5
Micromonas_pusilla_CCMP1545_v3.0 6 5
Porphyridium_purpureum_02_2012 2 2
Thecamonas_trahens_ATCC_50062_ 13 10
Bigelowiella_natans_CCMP2755_22 17 9
Cyanophora_paradoxa_ 124 105
Leishmania_mexicana_2.4 5 5
Leishmania_major_strain_Friedlin_ 6 6
Leishmania_infantum_JPCM5_2.4 6 6
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 5 5
Trypanosoma_vivax_ 3 3
Trypanosoma_cruzi_strain_CL_Brener 4 4
Trypanosoma_congolense_2.4 4 4
Trypanosoma_brucei_gambiense_v4.1 2 2
Trypanosoma_brucei_TREU927_v4.1 2 2
Ectocarpus_siliculosus 24 21
Aureococcus_anophagefferens_ 25 16
Albugo_laibachii_22 14 7
Pythium_iwayamai_DAOM_BR242034_22 16 5
Pythium_arrhenomanes_ATCC_12531_22 3 3
Pythium_ultimum_v1.7-2 28 4
Pythium_aphanidermatum_DAOM_BR444_22 5 5
Pythium_irregulare_DAOM_BR486_22 8 5
Pythium_vexans_DAOM_BR484_22 15 6
Phytophthora_ramorum_1.1   (Sudden oak death agent)   69 9
Phytophthora_sojae_1.1 54 7
Phytophthora_infestans_T30-4_ 46 11
Phytophthora_capsici_ 56 22
Hyaloperonospora_arabidopsidis_22 21 7
Phaeodactylum_tricornutumCCAP_1055/1 21 16
Fragilariopsis_cylindrus 33 25
Thalassiosira_pseudonana_CCMP1335 31 25
Perkinsus_marinus_ATCC_50983_ 6 6
Paramecium_tetraurelia_ 54 54
Tetrahymena_thermophila_SB210_1_ 57 56
Ichthyophthirius_multifiliis_strain_G5_ 31 31
Cryptosporidium_hominis 1 1
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Symbiodinium_minutum_clade_B1_v1.2 27 25
Naegleria_gruberi_ 80 76
Trichomonas_vaginalis_ 94 94
Guillardia_theta_CCMP2712_v1.0_ 74 37
Emiliania_huxleyi_CCMP1516_ 66 45
Thermobaculum_terrenum_ATCC_BAA-798 29 12
Leptolyngbya_sp._PCC_7376 70 44
Pseudanabaena_sp._PCC_7367 102 40
Acaryochloris_marina_MBIC11017 105 47
Synechocystis_sp._PCC_6803 66 30
Thermosynechococcus_sp._NK55 21 13
Thermosynechococcus_elongatus_BP-1 24 13
Synechococcus_sp._PCC_7502 76 29
Synechococcus_sp._PCC_6312 39 17
Synechococcus_sp._CC9311 4 4
Synechococcus_elongatus_PCC_7942 37 15
Prochlorococcus_marinus_str._MIT_9515 1 1
Microcoleus_sp._PCC_7113 322 137
Trichodesmium_erythraeum_IMS101 22 11
Geitlerinema_sp._PCC_7407 145 56
Cyanothece_sp._PCC_8802 54 28
Gloeocapsa_sp._PCC_7428 136 60
cyanobacterium_UCYN-A 1 1
Halothece_sp._PCC_7418 58 27
Microcystis_aeruginosa_NIES-843 7 7
Gloeobacter_violaceus_PCC_7421 38 26
Rivularia_sp._PCC_7116 144 61
Calothrix_sp._PCC_7507 99 52
Anabaena_variabilis_ATCC_29413 142 60
'Nostoc_azollae'_0708 35 18
Nostoc_sp._PCC_7107 111 56
Nostoc_punctiforme_PCC_73102 177 82
Nostoc_sp._PCC_7120 141 61
Nostoc_sp._PCC_7524 145 54
Anabaena_sp._90 17 11
Conexibacter_woesei_DSM_14684 21 15
Eggerthella_sp._YY7918 15 8
Eggerthella_lenta_DSM_2243 16 10
Slackia_heliotrinireducens_DSM_20476 3 2
Olsenella_uli_DSM_7084 2 2
Atopobium_parvulum_DSM_20469 2 2
Rubrobacter_xylanophilus_DSM_9941 27 14
Ilumatobacter_coccineus 24 18
Acidimicrobium_ferrooxidans_DSM_10331 2 2
Thermobispora_bispora_DSM_43833 9 7
Nakamurella_multipartita_DSM_44233 13 11
Acidothermus_cellulolyticus_11B 9 7
Modestobacter_marinus 55 40
Blastococcus_saxobsidens_DD2 31 27
Geodermatophilus_obscurus_DSM_43160 34 28
Kineococcus_radiotolerans_SRS30216 58 43
Catenulispora_acidiphila_DSM_44928 22 17
Stackebrandtia_nassauensis_DSM_44728 5 4
Frankia_symbiont_of_Datisca_glomerata 20 14
Frankia_sp._EAN1pec 31 22
Frankia_alni_ACN14a 25 16
Thermobifida_fusca_YX 15 11
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 14 11
Thermomonospora_curvata_DSM_43183 14 12
Streptosporangium_roseum_DSM_43021 19 16
Kitasatospora_setae_KM-6054 39 29
Streptomyces_coelicolor_A3(2) 42 35
Streptomyces_sp._PAMC26508 34 30
Streptomyces_flavogriseus_ATCC_33331 33 29
Streptomyces_sp._SirexAA-E 26 23
Streptomyces_griseus_subsp._griseus_NBRC_13350 28 22
Streptomyces_bingchenggensis_BCW-1 47 35
Streptomyces_violaceusniger_Tu_4113 44 34
Streptomyces_avermitilis_MA-4680 53 41
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 35 29
Streptomyces_scabiei_87.22 54 41
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 59 46
Actinosynnema_mirum_DSM_43827 31 21
Saccharomonospora_viridis_DSM_43017 10 7
Pseudonocardia_dioxanivorans_CB1190 14 10
Saccharopolyspora_erythraea_NRRL_2338 29 17
Amycolatopsis_mediterranei_U32 19 14
Kribbella_flavida_DSM_17836 6 5
Nocardioides_sp._JS614 28 17
Propionibacterium_propionicum_F0230a 1 1
Propionibacterium_acnes_SK137 1 1
Microlunatus_phosphovorus_NM-1 3 3
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1 1
Salinispora_arenicola_CNS-205 2 2
Salinispora_tropica_CNB-440 2 2
Verrucosispora_maris_AB-18-032 2 2
Micromonospora_sp._L5 5 5
Micromonospora_aurantiaca_ATCC_27029 4 4
Actinoplanes_sp._N902-109 38 31
Actinoplanes_sp._SE50/110 82 59
Actinoplanes_missouriensis_431 70 53
Tsukamurella_paurometabola_DSM_20162 7 4
Gordonia_sp._KTR9 9 6
Gordonia_polyisoprenivorans_VH2 2 2
Gordonia_bronchialis_DSM_43247 2 2
Rhodococcus_jostii_RHA1 19 18
Rhodococcus_equi_103S 1 1
Rhodococcus_opacus_B4 10 9
Rhodococcus_erythropolis_PR4 9 9
Nocardia_cyriacigeorgica_GUH-2 6 5
Nocardia_farcinica_IFM_10152 14 11
Amycolicicoccus_subflavus_DQS3-9A1 5 5
Mycobacterium_massiliense_str._GO_06 3 3
Mycobacterium_abscessus_ATCC_19977 3 3
Mycobacterium_sp._JLS 10 9
Mycobacterium_intracellulare_ATCC_13950 8 8
Mycobacterium_avium_104 11 9
Mycobacterium_vanbaalenii_PYR-1 12 8
Mycobacterium_canettii_CIPT_140010059 2 2
Mycobacterium_africanum_GM041182 2 2
Mycobacterium_tuberculosis_KZN_1435 2 2
Mycobacterium_tuberculosis 2 2
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 3 3
Mycobacterium_rhodesiae_NBB3 9 7
Mycobacterium_ulcerans_Agy99 3 3
Mycobacterium_gilvum_PYR-GCK 14 11
Mycobacterium_chubuense_NBB4 14 10
Mycobacterium_marinum_M 5 5
Mycobacterium_smegmatis_str._MC2_155 10 9
Mycobacterium_leprae_Br4923 5 3
Corynebacterium_efficiens_YS-314 1 1
Corynebacterium_variabile_DSM_44702 2 2
Corynebacterium_glutamicum_R 3 3
Corynebacterium_diphtheriae_NCTC_13129 1 1
Sanguibacter_keddieii_DSM_10542 11 10
Beutenbergia_cavernae_DSM_12333 5 5
Leifsonia_xyli_subsp._xyli_str._CTCB07 2 2
Microbacterium_testaceum_StLB037 7 7
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 4 4
Jonesia_denitrificans_DSM_20603 1 1
Intrasporangium_calvum_DSM_43043 6 6
Brachybacterium_faecium_DSM_4810 1 1
Isoptericola_variabilis_225 6 6
Xylanimonas_cellulosilytica_DSM_15894 4 4
Cellulomonas_flavigena_DSM_20109 10 9
Cellulomonas_fimi_ATCC_484 19 14
[Cellvibrio]_gilvus_ATCC_13127 12 9
Arthrobacter_phenanthrenivorans_Sphe3 9 8
Arthrobacter_chlorophenolicus_A6 10 9
Arthrobacter_aurescens_TC1 7 7
Arthrobacter_arilaitensis_Re117 2 2
Kocuria_rhizophila_DC2201 2 2
Arthrobacter_sp._Rue61a 6 6
Arthrobacter_sp._FB24 16 12
Renibacterium_salmoninarum_ATCC_33209 2 2
Micrococcus_luteus_NCTC_2665 1 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1 1
Bifidobacterium_dentium_Bd1 1 1
Bifidobacterium_breve_ACS-071-V-Sch8b 1 1
Bifidobacterium_adolescentis_ATCC_15703 1 1
Arcanobacterium_haemolyticum_DSM_20595 3 3
Actinomyces_sp._F0330 5 5
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 32 17
Dehalococcoides_ethenogenes_195 33 16
Dehalococcoides_sp._BAV1 28 11
Dehalogenimonas_lykanthroporepellens_BL-DC-9 39 18
Anaerolinea_thermophila_UNI-1 43 31
Thermomicrobium_roseum_DSM_5159 17 6
Sphaerobacter_thermophilus_DSM_20745 14 11
Herpetosiphon_aurantiacus_DSM_785 75 45
Roseiflexus_sp._RS-1 61 41
Roseiflexus_castenholzii_DSM_13941 63 44
Chloroflexus_sp._MS-G 58 38
Chloroflexus_sp._Y-400-fl 65 41
Chloroflexus_aggregans_DSM_9485 74 46
Chloroflexus_aurantiacus_J-10-fl 69 45
Truepera_radiovictrix_DSM_17093 25 13
Deinococcus_gobiensis_I-0 33 25
Deinococcus_deserti_VCD115 71 35
Deinococcus_maricopensis_DSM_21211 63 34
Deinococcus_geothermalis_DSM_11300 16 11
Deinococcus_proteolyticus_MRP 13 9
Deinococcus_radiodurans_R1 12 7
Oceanithermus_profundus_DSM_14977 12 6
Marinithermus_hydrothermalis_DSM_14884 8 4
Meiothermus_silvanus_DSM_9946 6 6
Meiothermus_ruber_DSM_1279 6 4
Thermus_sp._CCB_US3_UF1 10 5
Thermus_scotoductus_SA-01 3 3
Thermus_thermophilus_HB27 5 3
Anaerococcus_prevotii_DSM_20548 3 3
Finegoldia_magna_ATCC_29328 2 2
Veillonella_parvula_DSM_2008 2 2
Megasphaera_elsdenii_DSM_20460 4 4
Acidaminococcus_intestini_RyC-MR95 3 3
Acidaminococcus_fermentans_DSM_20731 8 8
Megamonas_hypermegale 3 3
Selenomonas_sputigena_ATCC_35185 8 7
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 9 8
Natranaerobius_thermophilus_JW/NM-WN-LF 37 25
Symbiobacterium_thermophilum_IAM_14863 22 18
Clostridiales_genomosp._BVAB3_str._UPII9-5 2 2
Clostridium_clariflavum_DSM_19732 15 11
Eubacterium_siraeum 7 6
Clostridium_cellulolyticum_H10 6 6
Clostridium_thermocellum_ATCC_27405 10 9
Ethanoligenens_harbinense_YUAN-3 6 6
Faecalibacterium_prausnitzii 2 2
Ruminococcus_sp. 4 4
Ruminococcus_albus_7 5 4
Thermaerobacter_marianensis_DSM_12885 2 2
Sulfobacillus_acidophilus_DSM_10332 6 6
Oscillibacter_valericigenes_Sjm18-20 20 15
butyrate-producing_bacterium_SS3/4 2 2
butyrate-producing_bacterium_SM4/1 1 1
Candidatus_Desulforudis_audaxviator_MP104C 20 11
Thermincola_potens_JR 21 16
Pelotomaculum_thermopropionicum_SI 27 21
Desulfosporosinus_acidiphilus_SJ4 82 56
Desulfosporosinus_orientis_DSM_765 126 91
Dehalobacter_sp._DCA 15 10
Dehalobacter_sp._CF 15 10
Syntrophobotulus_glycolicus_DSM_8271 21 14
Desulfitobacterium_hafniense_Y51 53 48
Desulfitobacterium_dehalogenans_ATCC_51507 40 34
Desulfotomaculum_reducens_MI-1 44 33
Desulfotomaculum_acetoxidans_DSM_771 48 28
Desulfotomaculum_kuznetsovii_DSM_6115 30 25
Desulfotomaculum_carboxydivorans_CO-1-SRB 23 18
Desulfotomaculum_ruminis_DSM_2154 44 31
Acetobacterium_woodii_DSM_1030 78 48
Eubacterium_eligens_ATCC_27750 6 6
Eubacterium_limosum_KIST612 57 39
Clostridium_difficile_630 31 23
Clostridium_sticklandii_DSM_519 27 22
Filifactor_alocis_ATCC_35896 1 1
Clostridium_saccharolyticum_WM1 20 12
Clostridium_phytofermentans_ISDg 4 4
Clostridium_lentocellum_DSM_5427 8 7
[Ruminococcus]_obeum 4 4
[Ruminococcus]_torques 3 3
Eubacterium_rectale_M104/1 3 3
Eubacterium_rectale_ATCC_33656 3 3
Coprococcus_sp._ART55/1 3 3
Roseburia_hominis_A2-183 6 6
Roseburia_intestinalis 7 6
Butyrivibrio_proteoclasticus_B316 7 6
Butyrivibrio_fibrisolvens 2 2
Syntrophothermus_lipocalidus_DSM_12680 32 21
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 62 28
Heliobacterium_modesticaldum_Ice1 27 18
Alkaliphilus_oremlandii_OhILAs 25 22
Alkaliphilus_metalliredigens_QYMF 54 35
Clostridium_sp._BNL1100 9 9
Clostridium_novyi_NT 12 11
Clostridium_ljungdahlii_DSM_13528 27 25
Clostridium_kluyveri_DSM_555 17 13
Clostridium_beijerinckii_NCIMB_8052 54 37
Clostridium_tetani_E88 8 8
Clostridium_perfringens_ATCC_13124 11 8
Clostridium_cellulovorans_743B 16 10
Clostridium_botulinum_A_str._ATCC_3502 16 14
Clostridium_acetobutylicum_ATCC_824 8 6
Mahella_australiensis_50-1_BON 2 2
Thermosediminibacter_oceani_DSM_16646 16 15
Caldicellulosiruptor_obsidiansis_OB47 5 4
Caldicellulosiruptor_kronotskyensis_2002 6 5
Caldicellulosiruptor_hydrothermalis_108 5 4
Caldicellulosiruptor_owensensis_OL 6 5
Caldicellulosiruptor_lactoaceticus_6A 5 4
Caldicellulosiruptor_kristjanssonii_177R1B 5 4
Caldicellulosiruptor_saccharolyticus_DSM_8903 6 5
Caldicellulosiruptor_bescii_DSM_6725 6 5
Thermoanaerobacterium_xylanolyticum_LX-11 10 6
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 5 5
Thermodesulfobium_narugense_DSM_14796 34 17
Coprothermobacter_proteolyticus_DSM_5265 4 3
Tepidanaerobacter_acetatoxydans_Re1 15 14
Thermoanaerobacter_tengcongensis_MB4 17 13
Carboxydothermus_hydrogenoformans_Z-2901 22 17
Moorella_thermoacetica_ATCC_39073 11 7
Ammonifex_degensii_KC4 3 3
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 10 8
Thermoanaerobacter_pseudethanolicus_ATCC_33223 8 7
Thermoanaerobacter_sp._X514 12 9
Thermoanaerobacter_italicus_Ab9 13 9
Thermoanaerobacter_wiegelii_Rt8.B1 21 15
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 9 8
Acetohalobium_arabaticum_DSM_5501 21 15
Halothermothrix_orenii_H_168 7 6
Halanaerobium_hydrogeniformans 67 32
Halanaerobium_praevalens_DSM_2228 31 20
Carnobacterium_sp._17-4 6 6
Carnobacterium_sp._WN1359 3 3
Aerococcus_urinae_ACS-120-V-Col10a 3 3
Tetragenococcus_halophilus_NBRC_12172 2 2
Melissococcus_plutonius_DAT561 1 1
Enterococcus_sp._7L76 3 3
Enterococcus_hirae_ATCC_9790 2 2
Enterococcus_faecium_Aus0004 1 1
Enterococcus_faecalis_62 3 3
Weissella_koreensis_KACC_15510 2 2
Oenococcus_oeni_PSU-1 1 1
Leuconostoc_sp._C2 1 1
Leuconostoc_kimchii_IMSNU_11154 1 1
Leuconostoc_citreum_KM20 3 3
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1 1
Leuconostoc_gasicomitatum_LMG_18811 1 1
Lactobacillus_casei_ATCC_334 3 3
Lactobacillus_kefiranofaciens_ZW3 3 3
Lactobacillus_crispatus_ST1 3 3
Lactobacillus_rhamnosus_Lc_705 3 3
Lactobacillus_johnsonii_FI9785 2 2
Lactobacillus_sanfranciscensis_TMW_1.1304 1 1
Lactobacillus_salivarius_CECT_5713 1 1
Lactobacillus_ruminis_ATCC_27782 2 2
Lactobacillus_fermentum_IFO_3956 2 2
Lactobacillus_amylovorus_GRL1118 1 1
Lactobacillus_sakei_subsp._sakei_23K 2 2
Lactobacillus_reuteri_DSM_20016 2 2
Lactobacillus_gasseri_ATCC_33323 2 2
Lactobacillus_plantarum_JDM1 2 2
Lactobacillus_helveticus_DPC_4571 2 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 3 3
Lactobacillus_buchneri_NRRL_B-30929 2 2
Lactobacillus_buchneri 2 2
Lactobacillus_brevis_ATCC_367 3 3
Lactobacillus_acidophilus_30SC 3 3
Pediococcus_claussenii_ATCC_BAA-344 1 1
Pediococcus_pentosaceus_ATCC_25745 1 1
Lactococcus_garvieae_ATCC_49156 1 1
Lactococcus_lactis_subsp._cremoris_MG1363 1 1
Streptococcus_sp._I-P16 2 2
Streptococcus_sp._I-G2 2 2
Streptococcus_intermedius_JTH08 2 2
Streptococcus_gallolyticus_UCN34 4 4
Streptococcus_pseudopneumoniae_IS7493 2 2
Streptococcus_pasteurianus_ATCC_43144 3 3
Streptococcus_equi_subsp._equi_4047 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1 1
Streptococcus_infantarius_subsp._infantarius_CJ18 3 3
Streptococcus_macedonicus_ACA-DC_198 3 3
Streptococcus_mitis_B6 2 2
Streptococcus_uberis_0140J 1 1
Streptococcus_parauberis_KCTC_11537 1 1
Streptococcus_parasanguinis_ATCC_15912 2 2
Streptococcus_pyogenes_str._Manfredo 1 1
Streptococcus_pneumoniae_P1031 2 2
Streptococcus_agalactiae_A909 2 2
Streptococcus_mutans_NN2025 2 2
Streptococcus_thermophilus_LMD-9 1 1
Streptococcus_suis_P1/7 1 1
Streptococcus_sanguinis_SK36 2 2
Streptococcus_salivarius_57.I 2 2
Streptococcus_oralis_Uo5 2 2
Streptococcus_gordonii_str._Challis_substr._CH1 2 2
Exiguobacterium_sp._MH3 22 16
Exiguobacterium_sp._AT1b 24 17
Exiguobacterium_sibiricum_255-15 25 17
Kyrpidia_tusciae_DSM_2912 18 16
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 18 15
Brevibacillus_brevis_NBRC_100599 50 39
Paenibacillus_sp._JDR-2 37 26
Paenibacillus_terrae_HPL-003 19 14
Paenibacillus_mucilaginosus_3016 52 33
Paenibacillus_polymyxa_M1 18 13
Bacillus_selenitireducens_MLS10 53 32
Listeria_welshimeri_serovar_6b_str._SLCC5334 5 5
Listeria_innocua_Clip11262 5 5
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 4 4
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 6 6
Listeria_ivanovii_subsp._ivanovii_PAM_55 5 5
Solibacillus_silvestris_StLB046 24 21
Geobacillus_thermoglucosidasius_C56-YS93 31 20
Lysinibacillus_sphaericus_C3-41 23 19
Oceanobacillus_iheyensis_HTE831 15 14
Anoxybacillus_flavithermus_WK1 22 16
Geobacillus_thermoleovorans_CCB_US3_UF5 27 20
Geobacillus_kaustophilus_HTA426 29 22
Geobacillus_sp._GHH01 29 22
Geobacillus_sp._WCH70 21 13
Geobacillus_thermodenitrificans_NG80-2 29 21
Halobacillus_halophilus_DSM_2266 17 14
Bacillus_sp._JS 19 13
Bacillus_sp._1NLA3E 24 20
Bacillus_amyloliquefaciens_FZB42 18 12
Bacillus_atrophaeus_1942 20 13
Bacillus_subtilis_subsp._subtilis_str._168 19 13
Bacillus_licheniformis_DSM_13_=_ATCC_14580 21 15
Bacillus_halodurans_C-125 17 15
Bacillus_weihenstephanensis_KBAB4 30 23
Bacillus_thuringiensis_str._Al_Hakam 29 22
Bacillus_cereus_03BB102 27 22
Bacillus_anthracis_str._A0248 21 18
Bacillus_pseudofirmus_OF4 43 32
Bacillus_clausii_KSM-K16 16 14
Bacillus_cellulosilyticus_DSM_2522 31 20
Bacillus_pumilus_SAFR-032 24 17
Bacillus_megaterium_DSM_319 48 35
Bacillus_coagulans_2-6 9 8
Macrococcus_caseolyticus_JCSC5402 2 2
Staphylococcus_pseudintermedius_HKU10-03 2 2
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 2 2
Staphylococcus_lugdunensis_HKU09-01 3 3
Staphylococcus_haemolyticus_JCSC1435 2 2
Staphylococcus_epidermidis_RP62A 2 2
Staphylococcus_carnosus_subsp._carnosus_TM300 3 3
Staphylococcus_aureus_subsp._aureus_JH1 2 2
Staphylococcus_aureus 2 2
Candidatus_Cloacamonas_acidaminovorans 1 1
Gemmatimonas_aurantiaca_T-27 40 28
Melioribacter_roseus_P3M 76 35
Ignavibacterium_album_JCM_16511 59 24
Pelodictyon_phaeoclathratiforme_BU-1 65 24
Chlorobium_luteolum_DSM_273 32 20
Chlorobium_chlorochromatii_CaD3 13 5
Chlorobium_phaeobacteroides_DSM_266 29 16
Chlorobium_phaeovibrioides_DSM_265 11 10
Chlorobium_limicola_DSM_245 19 12
Chlorobaculum_parvum_NCIB_8327 17 9
Chlorobium_tepidum_TLS 10 7
Chloroherpeton_thalassium_ATCC_35110 104 26
Prosthecochloris_aestuarii_DSM_271 14 7
Haliscomenobacter_hydrossis_DSM_1100 18 14
Saprospira_grandis_str._Lewin 8 2
Niastella_koreensis_GR20-10 69 37
Chitinophaga_pinensis_DSM_2588 54 28
Salinibacter_ruber_M8 99 34
Rhodothermus_marinus_DSM_4252 29 15
Flexibacter_litoralis_DSM_6794 63 20
Candidatus_Amoebophilus_asiaticus_5a2 3 3
Belliella_baltica_DSM_15883 51 18
Cyclobacterium_marinum_DSM_745 74 29
Marivirga_tractuosa_DSM_4126 67 28
Fibrella_aestuarina 75 35
Leadbetterella_byssophila_DSM_17132 9 4
Dyadobacter_fermentans_DSM_18053 59 27
Cytophaga_hutchinsonii_ATCC_33406 64 32
Spirosoma_linguale_DSM_74 165 60
Runella_slithyformis_DSM_19594 60 22
Parabacteroides_distasonis_ATCC_8503 16 11
Tannerella_forsythia_ATCC_43037 1 1
Paludibacter_propionicigenes_WB4 51 15
Odoribacter_splanchnicus_DSM_20712 5 4
Bacteroides_sp._CF50 16 12
Prevotella_melaninogenica_ATCC_25845 1 1
Prevotella_intermedia_17 1 1
Prevotella_denticola_F0289 1 1
Prevotella_ruminicola_23 6 4
Porphyromonas_asaccharolytica_DSM_20707 3 3
Porphyromonas_gingivalis_ATCC_33277 3 3
Alistipes_finegoldii_DSM_17242 5 3
Bacteroides_salanitronis_DSM_18170 1 1
Bacteroides_helcogenes_P_36-108 9 5
Bacteroides_vulgatus_ATCC_8482 11 6
Bacteroides_thetaiotaomicron_VPI-5482 26 14
Bacteroides_fragilis_YCH46 24 14
Pedobacter_saltans_DSM_12145 20 13
Solitalea_canadensis_DSM_3403 23 14
Pedobacter_heparinus_DSM_2366 36 19
Sphingobacterium_sp._21 23 14
Fluviicola_taffensis_DSM_16823 8 7
Owenweeksia_hongkongensis_DSM_17368 26 13
Zunongwangia_profunda_SM-A87 31 13
Krokinobacter_sp._4H-3-7-5 19 10
Gramella_forsetii_KT0803 23 9
Lacinutrix_sp._5H-3-7-4 33 10
Maribacter_sp._HTCC2170 11 5
Robiginitalea_biformata_HTCC2501 8 3
Croceibacter_atlanticus_HTCC2559 6 2
Aequorivita_sublithincola_DSM_14238 10 4
Zobellia_galactanivorans 45 16
Muricauda_ruestringensis_DSM_13258 35 17
Cellulophaga_algicola_DSM_14237 47 17
Cellulophaga_lytica_DSM_7489 16 7
Flavobacteriaceae_bacterium_3519-10 14 6
Polaribacter_sp._MED152 7 5
Capnocytophaga_canimorsus_Cc5 4 4
Capnocytophaga_ochracea_DSM_7271 5 5
Flavobacterium_indicum_GPTSA100-9 5 3
Flavobacterium_psychrophilum_JIP02/86 8 6
Flavobacterium_branchiophilum_FL-15 6 2
Flavobacterium_columnare_ATCC_49512 9 6
Flavobacterium_johnsoniae_UW101 42 20
Fibrobacter_succinogenes_subsp._succinogenes_S85 7 6
Waddlia_chondrophila_WSU_86-1044 3 2
Candidatus_Protochlamydia_amoebophila_UWE25 2 2
Parachlamydia_acanthamoebae_UV-7 2 2
Simkania_negevensis_Z 1 1
Chlamydophila_pecorum_E58 1 1
Chlamydia_muridarum_Nigg 1 1
Chlamydophila_pneumoniae_TW-183 1 1
Chlamydophila_caviae_GPIC 1 1
Chlamydophila_felis_Fe/C-56 1 1
Chlamydophila_abortus_S26/3 1 1
Chlamydia_psittaci_01DC11 1 1
Chlamydia_trachomatis_B/Jali20/OT 1 1
Phycisphaera_mikurensis_NBRC_102666 17 13
Isosphaera_pallida_ATCC_43644 42 17
Planctomyces_brasiliensis_DSM_5305 64 29
Planctomyces_limnophilus_DSM_3776 36 16
Rhodopirellula_baltica_SH_1 67 37
Pirellula_staleyi_DSM_6068 37 20
Methylacidiphilum_infernorum_V4 3 3
Coraliomargarita_akajimensis_DSM_45221 18 13
Opitutus_terrae_PB90-1 98 55
Akkermansia_muciniphila_ATCC_BAA-835 3 2
Fretibacterium_fastidiosum 2 2
Thermovirga_lienii_DSM_17291 13 11
Aminobacterium_colombiense_DSM_12261 11 7
Thermanaerovibrio_acidaminovorans_DSM_6589 22 14
Anaerobaculum_mobile_DSM_13181 7 5
Turneriella_parva_DSM_21527 40 18
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 35 22
Leptospira_interrogans_serovar_Lai_str._IPAV 51 33
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 80 41
Brachyspira_murdochii_DSM_12563 1 1
Borrelia_garinii_PBi 1 1
Borrelia_bissettii_DN127 1 1
Borrelia_afzelii_PKo 1 1
Borrelia_burgdorferi_B31 1 1
Spirochaeta_smaragdinae_DSM_11293 69 48
Sphaerochaeta_pleomorpha_str._Grapes 21 17
Sphaerochaeta_globus_str._Buddy 31 19
Sphaerochaeta_coccoides_DSM_17374 2 2
Spirochaeta_caldaria_DSM_7334 31 24
Treponema_azotonutricium_ZAS-9 23 17
Treponema_primitia_ZAS-2 9 7
Treponema_brennaborense_DSM_12168 1 1
Treponema_paraluiscuniculi_Cuniculi_A 1 1
Treponema_succinifaciens_DSM_2489 1 1
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_africana_DSM_8902 46 30
Spirochaeta_thermophila_DSM_6192 30 23
Thermodesulfatator_indicus_DSM_15286 18 11
Thermodesulfobacterium_sp._OPB45 5 4
Desulfurispirillum_indicum_S5 101 55
Calditerrivibrio_nitroreducens_DSM_19672 28 24
Denitrovibrio_acetiphilus_DSM_12809 60 41
Deferribacter_desulfuricans_SSM1 26 18
Flexistipes_sinusarabici_DSM_4947 30 15
Marinitoga_piezophila_KA3 8 6
Petrotoga_mobilis_SJ95 7 4
Mesotoga_prima_MesG1.Ag.4.2 37 23
Kosmotoga_olearia_TBF_19.5.1 18 13
Fervidobacterium_pennivorans_DSM_9078 9 7
Fervidobacterium_nodosum_Rt17-B1 10 8
Thermosipho_melanesiensis_BI429 9 8
Thermosipho_africanus_TCF52B 8 7
Thermotoga_lettingae_TMO 6 5
Thermotoga_thermarum_DSM_5069 5 4
Thermotoga_sp._RQ2 5 4
Thermotoga_naphthophila_RKU-10 5 4
Thermotoga_petrophila_RKU-1 6 5
Thermotoga_neapolitana_DSM_4359 5 4
Thermotoga_maritima_MSB8 5 4
Thermovibrio_ammonificans_HB-1 2 2
Desulfurobacterium_thermolithotrophum_DSM_11699 3 3
Sulfurihydrogenibium_sp._YO3AOP1 10 9
Sulfurihydrogenibium_azorense_Az-Fu1 9 7
Persephonella_marina_EX-H1 17 10
Hydrogenobaculum_sp._SN 9 6
Hydrogenobaculum_sp._HO 10 7
Hydrogenobaculum_sp._Y04AAS1 16 10
Thermocrinis_albus_DSM_14484 2 2
Aquifex_aeolicus_VF5 11 7
Hydrogenobacter_thermophilus_TK-6 7 5
Elusimicrobium_minutum_Pei191 10 2
Dictyoglomus_turgidum_DSM_6724 10 9
Dictyoglomus_thermophilum_H-6-12 10 9
Caldisericum_exile_AZM16c01 6 5
Candidatus_Chloracidobacterium_thermophilum_B 39 22
Candidatus_Solibacter_usitatus_Ellin6076 98 54
Granulicella_tundricola_MP5ACTX9 48 34
Granulicella_mallensis_MP5ACTX8 20 14
Candidatus_Koribacter_versatilis_Ellin345 59 38
Terriglobus_saanensis_SP1PR4 40 26
Terriglobus_roseus_DSM_18391 66 46
Acidobacterium_capsulatum_ATCC_51196 39 26
Thermodesulfovibrio_yellowstonii_DSM_11347 16 14
Candidatus_Nitrospira_defluvii 98 42
Leptospirillum_ferrooxidans_C2-3 55 29
Sebaldella_termitidis_ATCC_33386 1 1
Leptotrichia_buccalis_C-1013-b 1 1
Ilyobacter_polytropus_DSM_2926 14 12
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 2 2
Candidatus_Methylomirabilis_oxyfera 22 17
candidate_division_SR1_bacterium_RAAC1_SR1_1 1 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 2 2
Candidatus_Saccharimonas_aalborgensis 2 2
Acidithiobacillus_ferrivorans_SS3 14 10
Acidithiobacillus_caldus_SM-1 21 17
Acidithiobacillus_ferrooxidans_ATCC_53993 6 6
Bacteriovorax_marinus_SJ 14 7
Bdellovibrio_bacteriovorus_HD100 30 21
Nautilia_profundicola_AmH 13 12
Nitratifractor_salsuginis_DSM_16511 10 9
Sulfurospirillum_deleyianum_DSM_6946 27 22
Sulfurospirillum_barnesii_SES-3 20 18
Arcobacter_sp._L 62 49
Arcobacter_nitrofigilis_DSM_7299 46 38
Arcobacter_butzleri_RM4018 33 23
Campylobacter_hominis_ATCC_BAA-381 2 2
Campylobacter_lari_RM2100 4 3
Campylobacter_curvus_525.92 9 7
Campylobacter_concisus_13826 3 3
Campylobacter_jejuni_subsp._doylei_269.97 3 2
Campylobacter_sp._03-427 7 4
Campylobacter_fetus_subsp._fetus_82-40 8 5
uncultured_Sulfuricurvum_sp._RIFRC-1 56 39
Sulfuricurvum_kujiense_DSM_16994 83 54
Sulfurimonas_autotrophica_DSM_16294 34 28
Sulfurimonas_denitrificans_DSM_1251 35 27
Wolinella_succinogenes_DSM_1740 32 23
Helicobacter_cetorum_MIT_00-7128 2 2
Helicobacter_bizzozeronii_CIII-1 2 2
Helicobacter_mustelae_12198 4 2
Helicobacter_felis_ATCC_49179 6 4
Helicobacter_cinaedi_PAGU611 2 2
Nitratiruptor_sp._SB155-2 18 14
Sulfurovum_sp._NBC37-1 21 15
Desulfarculus_baarsii_DSM_2075 131 60
Desulfobacca_acetoxidans_DSM_11109 54 30
Syntrophus_aciditrophicus_SB 66 40
Desulfomonile_tiedjei_DSM_6799 285 129
Syntrophobacter_fumaroxidans_MPOB 114 65
Desulfurivibrio_alkaliphilus_AHT2 54 45
Desulfotalea_psychrophila_LSv54 47 35
Desulfobulbus_propionicus_DSM_2032 166 83
Desulfatibacillum_alkenivorans_AK-01 228 125
Desulfobacterium_autotrophicum_HRM2 113 82
Desulfococcus_oleovorans_Hxd3 68 37
Desulfohalobium_retbaense_DSM_5692 70 47
Desulfomicrobium_baculatum_DSM_4028 153 84
Desulfovibrio_piezophilus 125 71
Desulfovibrio_aespoeensis_Aspo-2 103 61
Lawsonia_intracellularis_PHE/MN1-00 2 2
Desulfovibrio_magneticus_RS-1 272 153
Desulfovibrio_alaskensis_G20 92 67
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 129 76
Desulfovibrio_salexigens_DSM_2638 130 96
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 23 19
Desulfovibrio_africanus_str._Walvis_Bay 145 78
Hippea_maritima_DSM_10411 15 12
Geobacter_daltonii_FRC-32 97 65
Geobacter_sp._M21 155 92
Geobacter_uraniireducens_Rf4 113 68
Geobacter_lovleyi_SZ 111 74
Geobacter_bemidjiensis_Bem 147 91
Geobacter_sulfurreducens_KN400 93 66
Geobacter_metallireducens_GS-15 70 49
Pelobacter_propionicus_DSM_2379 123 75
Pelobacter_carbinolicus_DSM_2380 76 42
Haliangium_ochraceum_DSM_14365 81 45
Sorangium_cellulosum_'So_ce_56' 162 106
Anaeromyxobacter_sp._Fw109-5 64 49
Anaeromyxobacter_dehalogenans_2CP-1 36 29
Stigmatella_aurantiaca_DW4/3-1 121 76
Corallococcus_coralloides_DSM_2259 120 78
Myxococcus_xanthus_DK_1622 92 58
Myxococcus_fulvus_HW-1 91 57
Dechloromonas_aromatica_RCB 155 94
Thauera_sp._MZ1T 70 46
Azoarcus_sp._KH32C 130 87
Azoarcus_sp._BH72 102 59
Aromatoleum_aromaticum_EbN1 68 41
Dechlorosoma_suillum_PS 125 73
Pseudogulbenkiania_sp._NH8B 66 41
Laribacter_hongkongensis_HLHK9 46 30
Chromobacterium_violaceum_ATCC_12472 76 42
Neisseria_meningitidis_alpha14 1 1
Neisseria_meningitidis_FAM18 1 1
Neisseria_lactamica_020-06 1 1
Neisseria_gonorrhoeae_NCCP11945 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 101 49
beta_proteobacterium_CB 15 12
Methylibium_petroleiphilum_PM1 56 32
Thiomonas_arsenitoxydans 28 20
Thiomonas_intermedia_K12 27 18
Rubrivivax_gelatinosus_IL144 115 62
Leptothrix_cholodnii_SP-6 111 64
Burkholderia_rhizoxinica_HKI_454 16 12
Burkholderia_phytofirmans_PsJN 58 42
Burkholderia_phymatum_STM815 75 51
Burkholderia_xenovorans_LB400 59 43
Ralstonia_eutropha_JMP134 55 42
Cupriavidus_taiwanensis_LMG_19424 39 28
Cupriavidus_metallidurans_CH34 39 31
Cupriavidus_necator_N-1 41 31
Ralstonia_eutropha_H16 42 32
Ralstonia_pickettii_12D 47 33
Ralstonia_solanacearum_CFBP2957 42 29
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 7 6
Burkholderia_sp._RPE64 55 37
Burkholderia_sp._CCGE1002 69 47
Burkholderia_thailandensis_E264 26 24
Burkholderia_pseudomallei_1106a 29 26
Burkholderia_mallei_SAVP1 20 17
Burkholderia_ambifaria_AMMD 38 33
Burkholderia_cenocepacia_HI2424 32 26
Burkholderia_multivorans_ATCC_17616 44 35
Burkholderia_vietnamiensis_G4 45 37
Burkholderia_gladioli_BSR3 43 32
Burkholderia_glumae_BGR1 40 29
Verminephrobacter_eiseniae_EF01-2 17 13
Alicycliphilus_denitrificans_K601 45 31
Ramlibacter_tataouinensis_TTB310 76 48
Delftia_sp._Cs1-4 66 41
Delftia_acidovorans_SPH-1 61 39
Polaromonas_sp._JS666 61 35
Polaromonas_naphthalenivorans_CJ2 49 27
Variovorax_paradoxus_S110 32 21
Rhodoferax_ferrireducens_T118 95 58
Acidovorax_ebreus_TPSY 46 29
Acidovorax_sp._KKS102 105 58
Acidovorax_sp._JS42 38 25
Acidovorax_citrulli_AAC00-1 67 41
Acidovorax_avenae_subsp._avenae_ATCC_19860 76 44
Comamonas_testosteroni_CNB-2 61 40
Herminiimonas_arsenicoxydans 34 27
Collimonas_fungivorans_Ter331 24 17
Janthinobacterium_sp._Marseille 32 27
Herbaspirillum_seropedicae_SmR1 48 33
Pusillimonas_sp._T7-7 9 8
Advenella_kashmirensis_WT001 3 2
Taylorella_asinigenitalis_MCE3 4 3
Taylorella_equigenitalis_MCE9 4 3
Bordetella_petrii_DSM_12804 20 17
Bordetella_avium_197N 14 10
Bordetella_pertussis_Tohama_I 6 5
Bordetella_parapertussis_12822 13 11
Bordetella_bronchiseptica_RB50 16 14
Achromobacter_xylosoxidans_A8 29 20
Achromobacter_xylosoxidans 32 25
Thiobacillus_denitrificans_ATCC_25259 36 22
Nitrosospira_multiformis_ATCC_25196 42 26
Nitrosomonas_sp._Is79A3 62 39
Nitrosomonas_eutropha_C91 9 8
Nitrosomonas_europaea_ATCC_19718 11 10
Sideroxydans_lithotrophicus_ES-1 86 55
Gallionella_capsiferriformans_ES-2 138 78
Methylotenera_versatilis_301 81 41
Methylotenera_mobilis_JLW8 61 34
Methylovorus_sp._MP688 61 35
Methylovorus_glucosetrophus_SIP3-4 57 34
Methylobacillus_flagellatus_KT 30 20
Magnetococcus_marinus_MC-1 143 83
Parvularcula_bermudensis_HTCC2503 21 17
Asticcacaulis_excentricus_CB_48 31 20
Brevundimonas_subvibrioides_ATCC_15264 36 21
Caulobacter_sp._K31 64 40
Caulobacter_crescentus_NA1000 47 30
Caulobacter_segnis_ATCC_21756 50 33
Phenylobacterium_zucineum_HLK1 41 27
Erythrobacter_litoralis_HTCC2594 18 16
Sphingopyxis_alaskensis_RB2256 15 13
Novosphingobium_sp._PP1Y 31 26
Novosphingobium_aromaticivorans_DSM_12444 23 17
Sphingobium_sp._SYK-6 25 18
Sphingobium_japonicum_UT26S 26 22
Sphingobium_chlorophenolicum_L-1 23 20
Sphingomonas_sp._MM-1 32 21
Sphingomonas_wittichii_RW1 28 19
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 2 2
Maricaulis_maris_MCS10 34 21
Hirschia_baltica_ATCC_49814 19 12
Hyphomonas_neptunium_ATCC_15444 16 12
Dinoroseobacter_shibae_DFL_12 15 12
Phaeobacter_gallaeciensis_2.10 20 18
Pseudovibrio_sp._FO-BEG1 20 16
Jannaschia_sp._CCS1 24 16
Ruegeria_sp._TM1040 32 25
Ruegeria_pomeroyi_DSS-3 13 12
Ketogulonicigenium_vulgare_Y25 10 8
Ketogulonigenium_vulgarum_WSH-001 11 9
Roseobacter_litoralis_Och_149 21 15
Roseobacter_denitrificans_OCh_114 23 17
Rhodobacter_sphaeroides_ATCC_17029 40 24
Rhodobacter_capsulatus_SB_1003 59 36
Paracoccus_denitrificans_PD1222 13 11
Rhodospirillum_photometricum_DSM_122 118 58
Tistrella_mobilis_KA081020-065 66 37
Magnetospirillum_magneticum_AMB-1 154 102
Rhodospirillum_centenum_SW 75 46
Rhodospirillum_rubrum_F11 90 55
Azospirillum_lipoferum_4B 137 91
Azospirillum_sp._B510 122 87
Azospirillum_brasilense_Sp245 168 99
Gluconacetobacter_xylinus_NBRC_3288 20 18
Granulibacter_bethesdensis_CGDNIH1 11 7
Gluconacetobacter_diazotrophicus_PAl_5 18 14
Acidiphilium_multivorum_AIU301 29 21
Acidiphilium_cryptum_JF-5 25 19
Gluconobacter_oxydans_621H 12 9
Acetobacter_pasteurianus_IFO_3283-01 4 4
Polymorphum_gilvum_SL003B-26A1 28 21
Micavibrio_aeruginosavorus_ARL-13 21 14
Candidatus_Puniceispirillum_marinum_IMCC1322 3 3
Neorickettsia_sennetsu_str._Miyayama 1 1
Ehrlichia_chaffeensis_str._Arkansas 1 1
Ehrlichia_canis_str._Jake 1 1
Ehrlichia_ruminantium_str._Gardel 1 1
Anaplasma_phagocytophilum_HZ 1 1
Anaplasma_marginale_str._Florida 1 1
Starkeya_novella_DSM_506 37 27
Xanthobacter_autotrophicus_Py2 30 23
Azorhizobium_caulinodans_ORS_571 47 36
Methylobacterium_chloromethanicum_CM4 158 86
Methylobacterium_extorquens_AM1 127 74
Methylobacterium_sp._4-46 149 83
Methylobacterium_populi_BJ001 176 89
Methylobacterium_nodulans_ORS_2060 86 49
Methylobacterium_radiotolerans_JCM_2831 188 110
Parvibaculum_lavamentivorans_DS-1 34 21
Ochrobactrum_anthropi_ATCC_49188 21 14
Brucella_microti_CCM_4915 15 10
Brucella_pinnipedialis_B2/94 16 11
Brucella_canis_ATCC_23365 16 11
Brucella_suis_ATCC_23445 17 11
Brucella_melitensis_ATCC_23457 16 11
Brucella_ovis_ATCC_25840 15 10
Brucella_abortus_S19 16 11
Sinorhizobium_fredii_NGR234 55 30
Sinorhizobium_medicae_WSM419 47 27
Sinorhizobium_meliloti_AK83 44 24
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 48 33
Rhizobium_etli_CIAT_652 63 40
Rhizobium_leguminosarum_bv._viciae_3841 61 42
Agrobacterium_tumefaciens_str._C58 55 35
Agrobacterium_radiobacter_K84 39 26
Agrobacterium_sp._H13-3 54 39
Agrobacterium_vitis_S4 53 37
Candidatus_Liberibacter_asiaticus_str._psy62 6 4
Mesorhizobium_sp._BNC1 28 19
Mesorhizobium_opportunistum_WSM2075 64 31
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 47 29
Mesorhizobium_loti_MAFF303099 56 36
Methylocella_silvestris_BL2 34 20
Beijerinckia_indica_subsp._indica_ATCC_9039 25 16
Pelagibacterium_halotolerans_B2 33 26
Rhodomicrobium_vannielii_ATCC_17100 33 20
Hyphomicrobium_sp._MC1 31 20
Hyphomicrobium_denitrificans_ATCC_51888 30 21
Oligotropha_carboxidovorans_OM4 35 24
Rhodopseudomonas_palustris_BisA53 86 50
Nitrobacter_winogradskyi_Nb-255 32 18
Nitrobacter_hamburgensis_X14 43 26
Bradyrhizobium_japonicum_USDA_110 97 61
Bradyrhizobium_sp._ORS_278 89 54
Methylocystis_sp._SC2 37 20
Bartonella_tribocorum_CIP_105476 9 7
Bartonella_clarridgeiae_73 8 6
Bartonella_henselae_str._Houston-1 9 7
Bartonella_grahamii_as4aup 10 7
Bartonella_quintana_str._Toulouse 9 7
Bartonella_bacilliformis_KC583 7 6
Saccharophagus_degradans_2-40 41 26
Teredinibacter_turnerae_T7901 54 34
Cellvibrio_japonicus_Ueda107 52 35
Aggregatibacter_aphrophilus_NJ8700 1 1
Gallibacterium_anatis_UMN179 2 2
Pasteurella_multocida_subsp._multocida_str._3480 1 1
Haemophilus_parasuis_SH0165 1 1
Haemophilus_influenzae_PittEE 1 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1
Oceanimonas_sp._GK1 38 26
Tolumonas_auensis_DSM_9187 23 18
Aeromonas_veronii_B565 43 35
Aeromonas_salmonicida_subsp._salmonicida_A449 43 32
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 61 45
Aliivibrio_salmonicida_LFI1238 14 12
Vibrio_fischeri_MJ11 19 17
Vibrio_sp._Ex25 33 27
Vibrio_harveyi_ATCC_BAA-1116 30 25
Vibrio_parahaemolyticus_RIMD_2210633 37 30
Vibrio_splendidus_LGP32 25 20
Vibrio_anguillarum_775 25 23
Vibrio_furnissii_NCTC_11218 44 35
Vibrio_vulnificus_MO6-24/O 37 33
Vibrio_cholerae_O395 34 28
Photobacterium_profundum_SS9 26 22
Psychromonas_ingrahamii_37 69 45
Psychromonas_sp._CNPT3 13 13
Idiomarina_loihiensis_L2TR 32 27
Ferrimonas_balearica_DSM_9799 27 20
Shewanella_piezotolerans_WP3 45 32
Shewanella_loihica_PV-4 50 37
Shewanella_halifaxensis_HAW-EB4 36 25
Shewanella_sediminis_HAW-EB3 54 41
Shewanella_denitrificans_OS217 46 31
Shewanella_pealeana_ATCC_700345 39 27
Shewanella_oneidensis_MR-1 46 33
Shewanella_baltica_OS185 55 37
Shewanella_woodyi_ATCC_51908 60 43
Shewanella_sp._MR-4 56 38
Shewanella_amazonensis_SB2B 53 37
Shewanella_violacea_DSS12 36 29
Shewanella_frigidimarina_NCIMB_400 53 36
Shewanella_putrefaciens_CN-32 46 33
Colwellia_psychrerythraea_34H 66 43
Pseudoalteromonas_sp._SM9913 53 37
Pseudoalteromonas_atlantica_T6c 44 30
Pseudoalteromonas_haloplanktis_TAC125 38 28
Glaciecola_sp._4H-3-7+YE-5 44 27
Glaciecola_nitratireducens_FR1064 72 48
Marinobacter_adhaerens_HP15 67 49
Marinobacter_sp._BSs20148 60 42
Marinobacter_hydrocarbonoclasticus_ATCC_49840 55 43
Marinobacter_aquaeolei_VT8 43 36
Alteromonas_sp._SN2 54 39
Alteromonas_macleodii_str._'Deep_ecotype' 41 33
Kangiella_koreensis_DSM_16069 21 14
Hahella_chejuensis_KCTC_2396 62 47
Alcanivorax_borkumensis_SK2 14 11
Marinomonas_posidonica_IVIA-Po-181 34 24
Marinomonas_sp._MWYL1 47 35
Marinomonas_mediterranea_MMB-1 43 31
Chromohalobacter_salexigens_DSM_3043 25 18
Halomonas_elongata_DSM_2581 13 12
Methylomicrobium_alcaliphilum 141 74
Methylomonas_methanica_MC09 131 70
Methylococcus_capsulatus_str._Bath 36 17
Dichelobacter_nodosus_VCS1703A 3 3
Rhodanobacter_denitrificans 18 14
Frateuria_aurantia_DSM_6220 11 7
Pseudoxanthomonas_spadix_BD-a59 19 13
Pseudoxanthomonas_suwonensis_11-1 28 19
Stenotrophomonas_maltophilia_K279a 42 29
Xylella_fastidiosa_M23 5 4
Xanthomonas_axonopodis_pv._citri_str._306 49 31
Xanthomonas_albilineans_GPE_PC73 40 22
Xanthomonas_oryzae_pv._oryzae_PXO99A 38 23
Xanthomonas_campestris_pv._campestris_str._B100 53 32
Halothiobacillus_neapolitanus_c2 21 17
Spiribacter_sp._UAH-SP71 20 15
Alkalilimnicola_ehrlichii_MLHE-1 57 42
Thioalkalivibrio_sulfidophilus_HL-EbGr7 50 33
Thioalkalivibrio_sp._K90mix 54 31
Halorhodospira_halophila_SL1 54 33
Allochromatium_vinosum_DSM_180 116 68
Thiocystis_violascens_DSM_198 146 73
Nitrosococcus_watsonii_C-113 24 17
Nitrosococcus_halophilus_Nc4 41 25
Nitrosococcus_oceani_ATCC_19707 29 21
Coxiella_burnetii_Dugway_5J108-111 8 6
Legionella_longbeachae_NSW150 29 24
Legionella_pneumophila_str._Corby 22 18
gamma_proteobacterium_HdN1 51 39
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 1 1
Candidatus_Vesicomyosocius_okutanii_HA 1 1
Photorhabdus_asymbiotica 11 10
Photorhabdus_luminescens_subsp._laumondii_TTO1 12 11
Xenorhabdus_bovienii_SS-2004 4 4
Xenorhabdus_nematophila_ATCC_19061 6 5
Providencia_stuartii_MRSN_2154 10 10
Proteus_mirabilis_HI4320 7 7
Edwardsiella_ictaluri_93-146 8 7
Edwardsiella_tarda_EIB202 15 12
Rahnella_sp._Y9602 23 17
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 21 15
Yersinia_pseudotuberculosis_IP_31758 14 10
Yersinia_pestis_Pestoides_F 11 7
Yersinia_enterocolitica_subsp._enterocolitica_8081 29 19
Serratia_sp._AS12 19 16
Serratia_sp._ATCC_39006 22 17
Serratia_plymuthica_AS9 19 16
Serratia_proteamaculans_568 21 16
Dickeya_dadantii_Ech703 28 21
Dickeya_zeae_Ech1591 22 17
Pectobacterium_wasabiae_WPP163 13 12
Pectobacterium_sp._SCC3193 14 13
Pectobacterium_atrosepticum_SCRI1043 17 14
Pectobacterium_carotovorum_subsp._carotovorum_PC1 15 13
Sodalis_glossinidius_str._'morsitans' 5 5
Pantoea_sp._At-9b 25 20
Pantoea_vagans_C9-1 29 20
Pantoea_ananatis_LMG_20103 23 18
Erwinia_tasmaniensis_Et1/99 14 9
Erwinia_sp._Ejp617 11 7
Erwinia_billingiae_Eb661 24 15
Erwinia_pyrifoliae_Ep1/96 10 7
Erwinia_amylovora_ATCC_49946 14 9
Escherichia_blattae_DSM_4481 12 10
Cronobacter_turicensis_z3032 14 11
Cronobacter_sakazakii_ES15 14 11
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 4 4
Enterobacteriaceae_bacterium_strain_FGI_57 9 7
Shigella_sonnei_Ss046 15 12
Shigella_flexneri_5_str._8401 7 7
Shigella_dysenteriae_Sd197 6 6
Shigella_boydii_CDC_3083-94 13 10
Salmonella_bongori_NCTC_12419 11 10
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 12 11
Klebsiella_oxytoca_E718 11 11
Klebsiella_variicola_At-22 12 12
Klebsiella_pneumoniae_NTUH-K2044 10 10
Enterobacter_aerogenes_KCTC_2190 12 12
Escherichia_fergusonii_ATCC_35469 15 12
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 16 13
Enterobacter_sp._R4-368 26 23
Enterobacter_sp._638 15 13
Enterobacter_asburiae_LF7a 17 15
Enterobacter_cloacae_subsp._dissolvens_SDM 14 12
Citrobacter_rodentium_ICC168 15 13
Citrobacter_koseri_ATCC_BAA-895 18 15
Azotobacter_vinelandii_DJ 29 25
Pseudomonas_sp._TKP 73 49
Pseudomonas_sp._UW4 70 46
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 86 57
Pseudomonas_entomophila_L48 66 46
Pseudomonas_syringae_pv._tomato_str._DC3000 74 50
Pseudomonas_stutzeri_A1501 80 52
Pseudomonas_fulva_12-X 74 44
Pseudomonas_putida_F1 72 52
Pseudomonas_protegens_Pf-5 80 54
Pseudomonas_fluorescens_SBW25 76 52
Pseudomonas_mendocina_ymp 66 46
Pseudomonas_aeruginosa_UCBPP-PA14 69 45
Pseudomonas_sp._VLB120 71 50
Psychrobacter_sp._G 4 4
Psychrobacter_sp._PRwf-1 1 1
Psychrobacter_arcticus_273-4 1 1
Psychrobacter_cryohalolentis_K5 4 4
Acinetobacter_oleivorans_DR1 11 8
Acinetobacter_calcoaceticus_PHEA-2 12 9
Acinetobacter_baumannii_ATCC_17978 9 8
Acinetobacter_sp._ADP1 7 7
Methylophaga_sp._JAM1 50 33
Cycloclasticus_sp._P1 20 14
Thiomicrospira_crunogena_XCL-2 42 28
Thioalkalimicrobium_cyclicum_ALM1 4 4
Francisella_sp._TX077308 2 2
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1 1
Francisella_cf._novicida_3523 1 1
Francisella_novicida_U112 4 3
Candidatus_Nitrosopumilus_sp._AR2 2 2
Nitrosopumilus_maritimus_SCM1 3 3
Candidatus_Korarchaeum_cryptofilum_OPF8 1 1
Thermogladius_cellulolyticus_1633 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_fermentans_DSM_16532 1 1
Desulfurococcus_kamchatkensis_1221n 1 1
halophilic_archaeon_DL31 18 14
Methanocella_arvoryzae_MRE50 96 51
Methanocella_conradii_HZ254 37 18
Methanocella_paludicola_SANAE 134 51
Methanosaeta_harundinacea_6Ac 17 5
Methanosaeta_thermophila_PT 12 5
Methanosaeta_concilii_GP6 16 7
Methanosalsum_zhilinae_DSM_4017 58 29
Methanohalobium_evestigatum_Z-7303 96 33
Methanococcoides_burtonii_DSM_6242 53 34
Methanosarcina_acetivorans_C2A 169 58
Methanosarcina_mazei_Go1 98 37
Methanosarcina_barkeri_str._Fusaro 81 31
Methanohalophilus_mahii_DSM_5219 58 26
Methanosphaerula_palustris_E1-9c 208 80
Methanoregula_boonei_6A8 179 71
Methanospirillum_hungatei_JF-1 278 106
Methanocorpusculum_labreanum_Z 4 1
Methanoplanus_petrolearius_DSM_11571 131 62
Methanoculleus_bourgensis_MS2 72 26
Methanoculleus_marisnigri_JR1 87 35
Ferroglobus_placidus_DSM_10642 11 7
Archaeoglobus_profundus_DSM_5631 8 5
Archaeoglobus_veneficus_SNP6 20 9
Archaeoglobus_fulgidus_DSM_4304 46 25
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_sibiricus_MM_739 1 1
Thermococcus_barophilus_MP 1 1
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1
Thermoplasmatales_archaeon_BRNA1 1 1
Salinarchaeum_sp._Harcht-Bsk1 61 33
Halopiger_xanaduensis_SH-6 85 34
Haloterrigena_turkmenica_DSM_5511 119 48
Natrinema_sp._J7-2 46 20
Natrialba_magadii_ATCC_43099 45 24
Halorubrum_lacusprofundi_ATCC_49239 47 27
Haloquadratum_walsbyi_DSM_16790 19 11
Halogeometricum_borinquense_DSM_11551 65 35
Haloferax_mediterranei_ATCC_33500 51 31
Haloferax_volcanii_DS2 56 34
Halomicrobium_mukohataei_DSM_12286 49 28
Halorhabdus_utahensis_DSM_12940 62 39
Natronomonas_pharaonis_DSM_2160 83 39
Haloarcula_hispanica_ATCC_33960 81 45
Haloarcula_marismortui_ATCC_43049 120 57
Halalkalicoccus_jeotgali_B3 26 15
Halobacterium_salinarum_R1 26 16
Halobacterium_sp._NRC-1 28 15
Methanococcus_vannielii_SB 4 2
Methanothermobacter_marburgensis_str._Marburg 30 16
Methanothermobacter_thermautotrophicus_str._Delta_H 27 16
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 54 22
Aciduliprofundum_sp._MAR08-339 13 5
Aciduliprofundum_boonei_T469 11 4
Acholeplasma_laidlawii_PG-8A 4 4

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   87 55
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   67 42
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   31 19
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   18 14
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   25 16
Cryptococcus_neoformans_var._grubii_H99_ 9 8
Cryptococcus_neoformans_B-3501A_ 9 8
Cryptococcus_neoformans_JEC21_ 6 6
Paracoccidioides_brasiliensis_Pb01_ 9 6
Paracoccidioides_brasiliensis_Pb03_ 8 6
Coccidioides_posadasii_str._Silveira_ 6 4
Coccidioides_immitis_RMSCC_3703_ 4 3
Coccidioides_immitis_RMSCC_2394_ 6 4
Coccidioides_immitis_H538.4_ 5 3
Ajellomyces_dermatitidis_ER-3_ 8 5
Histoplasma_capsulatum_H143 7 4
Histoplasma_capsulatum_H88 9 5
Histoplasma_capsulatum_G186AR 8 5
Aspergillus_fumigatus_A1163_ 11 7
Candida_albicans_WO-1_ 2 2
Saccharomyces_cerevisiae_UC5 3 3
Saccharomyces_cerevisiae_PW5 3 3
Saccharomyces_cerevisiae_FL100 2 2
Saccharomyces_cerevisiae_CBS7960 2 2
Saccharomyces_cerevisiae_T7 3 3
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_FostersO 2 2
Saccharomyces_cerevisiae_VL3 3 3
Saccharomyces_cerevisiae_Vin13 3 3
Saccharomyces_cerevisiae_LalvinQA23 2 2
Saccharomyces_cerevisiae_AWRI796 3 3
Saccharomyces_cerevisiae_Sigma1278b 3 3
Saccharomyces_cerevisiae_W303 3 3
Saccharomyces_cerevisiae_JAY291 2 2
Saccharomyces_cerevisiae_AWRI1631 2 2
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_YJM789_ 3 3
Saccharomyces_cerevisiae_YJM789 3 3
Saccharomyces_cerevisiae_RM11-1a 3 3
Saccharomyces_cerevisiae_RM11-1a_ 2 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   3 3
Schizosaccharomyces_pombe_972h-_ 5 4
Batrachochytrium_dendrobatidis_JEL423_ 3 3
Batrachochytrium_dendrobatidis_JAM81_ 2 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   22 11
Hordeum_vulgare_22   (Domesticated barley)   56 40
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   31 23
Trypanosoma_brucei_Lister_427_v4.1 2 2
Chroococcidiopsis_thermalis_PCC_7203 107 62
Chamaesiphon_minutus_PCC_6605 79 39
Synechocystis_sp._PCC_6803_substr._PCC-P 59 26
Synechocystis_sp._PCC_6803_substr._PCC-N 59 26
Synechocystis_sp._PCC_6803_substr._GT-I 59 26
Synechocystis_sp._PCC_6803 66 30
Cyanobium_gracile_PCC_6307 23 10
Dactylococcopsis_salina_PCC_8305 4 4
Synechococcus_sp._JA-2-3B'a(2-13) 29 9
Synechococcus_sp._JA-3-3Ab 24 8
Synechococcus_sp._CC9902 3 3
Synechococcus_sp._RCC307 3 3
Synechococcus_sp._CC9605 2 2
Synechococcus_sp._WH_8102 2 2
Synechococcus_sp._WH_7803 4 4
Synechococcus_sp._PCC_7002 27 15
Synechococcus_elongatus_PCC_6301 37 16
Prochlorococcus_marinus_str._NATL1A 1 1
Prochlorococcus_marinus_str._MIT_9301 1 1
Prochlorococcus_marinus_str._AS9601 1 1
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 1 1
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 1 1
Prochlorococcus_marinus_str._MIT_9215 1 1
Prochlorococcus_marinus_str._MIT_9211 1 1
Prochlorococcus_marinus_str._MIT_9313 2 2
Prochlorococcus_marinus_str._MIT_9312 1 1
Prochlorococcus_marinus_str._MIT_9303 2 2
Prochlorococcus_marinus_str._NATL2A 1 1
Crinalium_epipsammum_PCC_9333 144 69
Oscillatoria_nigro-viridis_PCC_7112 353 112
Oscillatoria_acuminata_PCC_6304 353 114
Arthrospira_platensis_NIES-39 155 64
Cyanothece_sp._PCC_7822 172 65
Cyanothece_sp._PCC_7425 242 75
Cyanothece_sp._PCC_7424 106 42
Cyanothece_sp._ATCC_51142 61 30
Cyanothece_sp._PCC_8801 54 28
Cyanobacterium_aponinum_PCC_10605 66 32
Cyanobacterium_stanieri_PCC_7202 46 19
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 37 25
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 54 27
Stanieria_cyanosphaera_PCC_7437 88 39
Calothrix_parietina_Calothrix_sp._PCC_6303 89 49
Cylindrospermum_stagnale_PCC_7417 141 58
Anabaena_cylindrica_PCC_7122 116 52
Gordonibacter_pamelaeae_7-10-1-b 9 6
Adlercreutzia_equolifaciens_DSM_19450 7 5
Frankia_sp._EuI1c 28 22
Frankia_sp._CcI3 15 11
Nocardiopsis_alba_ATCC_BAA-2165 12 9
Streptomyces_albus_J1074 25 21
Streptomyces_rapamycinicus_NRRL_5491 55 42
Streptomyces_davawensis_JCM_4913 40 30
Streptomyces_fulvissimus_DSM_40593 32 25
Streptomyces_venezuelae_ATCC_10712 31 26
Streptomyces_collinus_Tu_365 53 39
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 35 29
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 57 45
Saccharothrix_espanaensis_DSM_44229 18 13
Amycolatopsis_mediterranei_RB 19 14
Amycolatopsis_mediterranei_S699 19 14
Amycolatopsis_mediterranei_S699 19 14
Amycolatopsis_orientalis_HCCB10007 18 12
Propionibacterium_acnes_ATCC_11828 1 1
Propionibacterium_acnes_TypeIA2_P.acn31 1 1
Propionibacterium_acnes_TypeIA2_P.acn17 1 1
Propionibacterium_acnes_TypeIA2_P.acn33 1 1
Propionibacterium_acnes_C1 1 1
Propionibacterium_acnes_HL096PA1 1 1
Propionibacterium_acnes_6609 1 1
Propionibacterium_acnes_266 1 1
Propionibacterium_acnes_KPA171202 1 1
Propionibacterium_acidipropionici_ATCC_4875 1 1
Actinoplanes_friuliensis_DSM_7358 48 39
Rhodococcus_pyridinivorans_SB3094 6 5
Rhodococcus_erythropolis_CCM2595 9 9
Nocardia_brasiliensis_ATCC_700358 13 12
Mycobacterium_sp._MOTT36Y 10 9
Mycobacterium_sp._JDM601 2 2
Mycobacterium_abscessus_subsp._bolletii_50594 3 3
Mycobacterium_liflandii_128FXT 5 5
Mycobacterium_sp._KMS 9 8
Mycobacterium_sp._MCS 9 8
Mycobacterium_yongonense_05-1390 10 9
Mycobacterium_intracellulare_MOTT-64 10 10
Mycobacterium_indicus_pranii_MTCC_9506 6 6
Mycobacterium_intracellulare_MOTT-02 8 8
Mycobacterium_avium_subsp._paratuberculosis_MAP4 10 8
Mycobacterium_avium_subsp._paratuberculosis_K-10 10 8
Mycobacterium_canettii_CIPT_140070017 2 2
Mycobacterium_canettii_CIPT_140060008 2 2
Mycobacterium_canettii_CIPT_140070008 2 2
Mycobacterium_canettii_CIPT_140070010 2 2
Mycobacterium_tuberculosis_EAI5/NITR206 2 2
Mycobacterium_tuberculosis_EAI5 2 2
Mycobacterium_tuberculosis_CAS/NITR204 2 2
Mycobacterium_tuberculosis_str._Beijing/NITR203 2 2
Mycobacterium_tuberculosis_UT205 2 2
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 2 2
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 2 2
Mycobacterium_tuberculosis_KZN_605 2 2
Mycobacterium_tuberculosis_KZN_4207 2 2
Mycobacterium_tuberculosis_CCDC5180 2 2
Mycobacterium_tuberculosis_CCDC5079 2 2
Mycobacterium_tuberculosis_CCDC5079 2 2
Mycobacterium_tuberculosis_H37Ra 2 2
Mycobacterium_tuberculosis_str._Haarlem/NITR202 2 2
Mycobacterium_tuberculosis_str._Haarlem 2 2
Mycobacterium_tuberculosis_F11 2 2
Mycobacterium_tuberculosis_H37Rv 2 2
Mycobacterium_tuberculosis_CDC1551 2 2
Mycobacterium_bovis_AF2122/97 2 2
Mycobacterium_bovis_BCG_str._Korea_1168P 4 4
Mycobacterium_bovis_BCG_str._Mexico 3 3
Mycobacterium_bovis_BCG_str._Tokyo_172 2 2
Mycobacterium_gilvum_Spyr1 15 12
Mycobacterium_smegmatis_str._MC2_155 10 9
Mycobacterium_leprae_TN 5 3
Mycobacterium_kansasii_ATCC_12478 11 10
Corynebacterium_maris_DSM_45190 2 2
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 5 4
Corynebacterium_glutamicum_MB001 1 1
Corynebacterium_glutamicum_SCgG2 4 3
Corynebacterium_glutamicum_SCgG1 4 3
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_diphtheriae_BH8 1 1
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_VA01 1 1
Corynebacterium_diphtheriae_HC04 1 1
Corynebacterium_diphtheriae_HC03 1 1
Corynebacterium_diphtheriae_HC02 1 1
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Corynebacterium_diphtheriae_CDCE_8392 1 1
Corynebacterium_diphtheriae_PW8 1 1
Corynebacterium_diphtheriae_C7_(beta) 1 1
Corynebacterium_diphtheriae_31A 1 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 3 3
Clavibacter_michiganensis_subsp._sepedonicus 5 5
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 4 4
Bifidobacterium_longum_NCC2705 1 1
Bifidobacterium_longum_DJO10A 1 1
Bifidobacterium_longum_subsp._infantis_157F 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1 1
Bifidobacterium_longum_subsp._longum_BBMN68 1 1
Bifidobacterium_longum_subsp._longum_F8 1 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1 1
Bifidobacterium_thermophilum_RBL67 1 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1 1
Bifidobacterium_animalis_subsp._lactis_B420 1 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1 1
Bifidobacterium_animalis_subsp._lactis_V9 1 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1 1
Bifidobacterium_animalis_subsp._lactis_AD011 1 1
Bifidobacterium_breve_UCC2003 1 1
Bifidobacterium_asteroides_PRL2011 1 1
Actinomyces_graevenitzii_C83_ 1 1
Actinomyces_viscosus_C505 5 5
Dehalococcoides_mccartyi_GY50 38 17
Dehalococcoides_mccartyi_DCMB5 41 20
Dehalococcoides_mccartyi_BTF08 44 15
Dehalococcoides_sp._GT 42 13
Dehalococcoides_sp._VS 52 19
Dehalococcoides_sp._CBDB1 55 23
Chthonomonas_calidirosea_T49 17 13
Deinococcus_peraridilitoris_DSM_19664 68 36
Thermus_oshimai_JL-2 10 6
Thermus_thermophilus_JL-18 6 4
Thermus_thermophilus_SG0.5JP17-16 6 4
Thermus_thermophilus_HB8 2 2
Eubacterium_siraeum_V10Sc8a 6 5
Clostridium_thermocellum_DSM_1313 9 8
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 7 6
Faecalibacterium_prausnitzii_L2-6 1 1
Ruminococcus_champanellensis_18P13 4 3
Sulfobacillus_acidophilus_TPY 6 6
Clostridium_acidurici_9a 11 9
Desulfosporosinus_meridiei_DSM_13257 82 53
Desulfitobacterium_dichloroeliminans_LMG_P-21439 22 21
Desulfitobacterium_hafniense_DCB-2 53 48
Desulfotomaculum_gibsoniae_DSM_7213 65 45
Clostridium_difficile_BI1 28 22
Clostridium_difficile_R20291 29 22
Clostridium_difficile_CD196 29 22
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 3 3
Coprococcus_catus_GD/7 12 12
Roseburia_intestinalis_XB6B4 8 7
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Clostridium_sp._SY8519 5 5
Clostridium_saccharobutylicum_DSM_13864 32 23
Clostridium_autoethanogenum_DSM_10061 27 25
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 38 29
Clostridium_kluyveri_NBRC_12016 17 13
Clostridium_tetani_genome_12124569 8 8
Clostridium_perfringens_SM101 9 7
Clostridium_perfringens_str._13 9 7
Clostridium_pasteurianum_BC1 19 12
Clostridium_botulinum_H04402_065 18 16
Clostridium_botulinum_BKT015925 11 10
Clostridium_botulinum_F_str._230613 15 14
Clostridium_botulinum_F_str._Langeland 20 18
Clostridium_botulinum_E3_str._Alaska_E43 19 15
Clostridium_botulinum_B1_str._Okra 19 17
Clostridium_botulinum_Ba4_str._657 16 14
Clostridium_botulinum_A2_str._Kyoto 17 15
Clostridium_botulinum_A3_str._Loch_Maree 16 14
Clostridium_botulinum_A_str._Hall 17 15
Clostridium_botulinum_A_str._ATCC_19397 17 15
Clostridium_acetobutylicum_DSM_1731 8 6
Clostridium_acetobutylicum_EA_2018 8 6
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 9 7
Thermoanaerobacterium_thermosaccharolyticum_M0795 8 7
Thermacetogenium_phaeum_DSM_12270 20 16
Thermoanaerobacter_sp._X513 11 8
Halobacteroides_halobius_DSM_5150 11 10
Carnobacterium_maltaromaticum_LMA28 4 4
Melissococcus_plutonius_ATCC_35311 1 1
Enterococcus_mundtii_QU_25 1 1
Enterococcus_casseliflavus_EC20 3 3
Enterococcus_faecium_Aus0085 1 1
Enterococcus_faecium_NRRL_B-2354 1 1
Enterococcus_faecium_DO 1 1
Enterococcus_faecalis_str._Symbioflor_1 3 3
Enterococcus_faecalis_D32 3 3
Enterococcus_faecalis_OG1RF 3 3
Enterococcus_faecalis_V583 4 4
Leuconostoc_carnosum_JB16 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 2 2
Leuconostoc_gelidum_JB7 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 3 3
Lactobacillus_casei_LOCK919 3 3
Lactobacillus_casei_W56 3 3
Lactobacillus_casei_LC2W 3 3
Lactobacillus_casei_BD-II 3 3
Lactobacillus_casei_BL23 3 3
Lactobacillus_casei_str._Zhang 3 3
Lactobacillus_rhamnosus_LOCK908 3 3
Lactobacillus_rhamnosus_LOCK900 3 3
Lactobacillus_rhamnosus_ATCC_8530 3 3
Lactobacillus_rhamnosus_GG 3 3
Lactobacillus_rhamnosus_GG 3 3
Lactobacillus_johnsonii_N6.2 2 2
Lactobacillus_johnsonii_DPC_6026 2 2
Lactobacillus_johnsonii_NCC_533 2 2
Lactobacillus_salivarius_UCC118 1 1
Lactobacillus_fermentum_F-6 2 2
Lactobacillus_fermentum_CECT_5716 2 2
Lactobacillus_amylovorus_GRL_1112 2 2
Lactobacillus_reuteri_TD1 2 2
Lactobacillus_reuteri_I5007 2 2
Lactobacillus_reuteri_JCM_1112 2 2
Lactobacillus_reuteri_SD2112 2 2
Lactobacillus_plantarum_16 2 2
Lactobacillus_plantarum_ZJ316 2 2
Lactobacillus_plantarum_subsp._plantarum_ST-III 2 2
Lactobacillus_plantarum_subsp._plantarum_P-8 2 2
Lactobacillus_plantarum_WCFS1 2 2
Lactobacillus_helveticus_R0052 2 2
Lactobacillus_helveticus_H10 2 2
Lactobacillus_helveticus_CNRZ32 2 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 6 6
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 3 3
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 3 3
Lactobacillus_brevis_KB290 3 3
Lactobacillus_acidophilus_La-14 2 2
Lactobacillus_acidophilus_NCFM 2 2
Pediococcus_pentosaceus_SL4 1 1
Lactococcus_garvieae_Lg2 1 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1 1
Lactococcus_lactis_subsp._lactis_IO-1 1 1
Lactococcus_lactis_subsp._lactis_CV56 1 1
Lactococcus_lactis_subsp._lactis_KF147 1 1
Lactococcus_lactis_subsp._lactis_Il1403 1 1
Lactococcus_lactis_subsp._cremoris_KW2 1 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1 1
Lactococcus_lactis_subsp._cremoris_A76 1 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1 1
Lactococcus_lactis_subsp._cremoris_SK11 1 1
Streptococcus_constellatus_subsp._pharyngis_C1050 2 2
Streptococcus_constellatus_subsp._pharyngis_C818 2 2
Streptococcus_constellatus_subsp._pharyngis_C232 2 2
Streptococcus_intermedius_B196 2 2
Streptococcus_intermedius_C270 2 2
Streptococcus_anginosus_C238 2 2
Streptococcus_anginosus_C1051 2 2
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 4 4
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 4 4
Streptococcus_lutetiensis_033 3 3
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1 1
Streptococcus_equi_subsp._zooepidemicus 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1 1
Streptococcus_oligofermentans_AS_1.3089 2 2
Streptococcus_iniae_SF1 1 1
Streptococcus_parasanguinis_FW213 2 2
Streptococcus_pyogenes_HSC5 1 1
Streptococcus_pyogenes_A20 1 1
Streptococcus_pyogenes_MGAS1882 1 1
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_Alab49 1 1
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pyogenes_MGAS10270 1 1
Streptococcus_pyogenes_MGAS2096 1 1
Streptococcus_pyogenes_MGAS9429 1 1
Streptococcus_pyogenes_MGAS6180 1 1
Streptococcus_pyogenes_NZ131 2 2
Streptococcus_pyogenes_MGAS8232 1 1
Streptococcus_pyogenes_MGAS10394 1 1
Streptococcus_pyogenes_MGAS315 1 1
Streptococcus_pyogenes_SSI-1 1 1
Streptococcus_pyogenes_M1_476 1 1
Streptococcus_pyogenes_MGAS5005 1 1
Streptococcus_pyogenes_M1_GAS 1 1
Streptococcus_pneumoniae_A026 2 2
Streptococcus_pneumoniae_ST556 2 2
Streptococcus_pneumoniae_SPNA45 2 2
Streptococcus_pneumoniae_SPN994039 2 2
Streptococcus_pneumoniae_SPN994038 2 2
Streptococcus_pneumoniae_SPN034183 2 2
Streptococcus_pneumoniae_SPN034156 2 2
Streptococcus_pneumoniae_INV104 2 2
Streptococcus_pneumoniae_INV200 2 2
Streptococcus_pneumoniae_OXC141 2 2
Streptococcus_pneumoniae_gamPNI0373 2 2
Streptococcus_pneumoniae_AP200 2 2
Streptococcus_pneumoniae_ATCC_700669 2 2
Streptococcus_pneumoniae_TCH8431/19A 2 2
Streptococcus_pneumoniae_CGSP14 2 2
Streptococcus_pneumoniae_G54 2 2
Streptococcus_pneumoniae_JJA 2 2
Streptococcus_pneumoniae_70585 2 2
Streptococcus_pneumoniae_Hungary19A-6 2 2
Streptococcus_pneumoniae_Taiwan19F-14 2 2
Streptococcus_pneumoniae_D39 2 2
Streptococcus_pneumoniae_670-6B 2 2
Streptococcus_pneumoniae_R6 2 2
Streptococcus_pneumoniae_TIGR4 2 2
Streptococcus_agalactiae_ILRI112 2 2
Streptococcus_agalactiae_ILRI005 2 2
Streptococcus_agalactiae_09mas018883 2 2
Streptococcus_agalactiae_2-22 1 1
Streptococcus_agalactiae_SA20-06 2 2
Streptococcus_agalactiae_GD201008-001 2 2
Streptococcus_agalactiae_NEM316 2 2
Streptococcus_agalactiae_2603V/R 2 2
Streptococcus_mutans_GS-5 2 2
Streptococcus_mutans_LJ23 2 2
Streptococcus_mutans_UA159 2 2
Streptococcus_thermophilus_MN-ZLW-002 1 1
Streptococcus_thermophilus_JIM_8232 1 1
Streptococcus_thermophilus_ND03 1 1
Streptococcus_thermophilus_CNRZ1066 2 2
Streptococcus_thermophilus_LMG_18311 1 1
Streptococcus_suis_T15 2 2
Streptococcus_suis_TL13 2 2
Streptococcus_suis_SC070731 1 1
Streptococcus_suis_S735 1 1
Streptococcus_suis_ST3 2 2
Streptococcus_suis_D9 2 2
Streptococcus_suis_SS12 1 1
Streptococcus_suis_D12 2 2
Streptococcus_suis_ST1 2 2
Streptococcus_suis_A7 1 1
Streptococcus_suis_JS14 1 1
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 1 1
Streptococcus_suis_98HAH33 1 1
Streptococcus_suis_05ZYH33 1 1
Streptococcus_salivarius_CCHSS3 2 2
Streptococcus_salivarius_JIM8777 3 3
Exiguobacterium_antarcticum_B7 20 13
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 14 12
Thermobacillus_composti_KWC4 15 13
Paenibacillus_sp._Y412MC10 25 16
Paenibacillus_mucilaginosus_KNP414 67 37
Paenibacillus_mucilaginosus_K02 67 37
Paenibacillus_larvae_subsp._larvae_DSM_25430 12 9
Paenibacillus_polymyxa_CR1 17 12
Paenibacillus_polymyxa_SC2 18 13
Paenibacillus_polymyxa_E681 20 14
Listeria_monocytogenes_EGD_sequence 6 6
Listeria_monocytogenes_N53-1 6 6
Listeria_monocytogenes_La111 6 6
Listeria_monocytogenes_serotype_4b_str._LL195 6 6
Listeria_monocytogenes_07PF0776 6 6
Listeria_monocytogenes_M7 6 6
Listeria_monocytogenes_J1-220 6 6
Listeria_monocytogenes_J1816 6 6
Listeria_monocytogenes_SLCC2376 6 6
Listeria_monocytogenes_SLCC5850 6 6
Listeria_monocytogenes_ATCC_19117 6 6
Listeria_monocytogenes_L312 6 6
Listeria_monocytogenes_SLCC2479 6 6
Listeria_monocytogenes_SLCC7179 6 6
Listeria_monocytogenes_SLCC2540 6 6
Listeria_monocytogenes_SLCC2378 6 6
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 6 6
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 6 6
Listeria_monocytogenes_serotype_7_str._SLCC2482 6 6
Listeria_monocytogenes_08-5578 6 6
Listeria_monocytogenes_08-5923 6 6
Listeria_monocytogenes_L99 6 6
Listeria_monocytogenes_HCC23 6 6
Listeria_monocytogenes_10403S 6 6
Listeria_monocytogenes_J0161 6 6
Listeria_monocytogenes_Finland_1998 6 6
Listeria_monocytogenes_FSL_R2-561 6 6
Listeria_monocytogenes_serotype_4b_str._F2365 6 6
Listeria_monocytogenes_EGD-e 6 6
Geobacillus_sp._C56-T3 31 23
Geobacillus_sp._Y4.1MC1 30 19
Geobacillus_sp._Y412MC52 34 26
Geobacillus_sp._Y412MC61 33 25
Amphibacillus_xylanus_NBRC_15112 10 8
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 18 12
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 17 11
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 16 10
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 17 11
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 17 11
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 17 11
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 17 11
Bacillus_amyloliquefaciens_LFB112 17 11
Bacillus_amyloliquefaciens_CC178 18 12
Bacillus_amyloliquefaciens_Y2 17 11
Bacillus_amyloliquefaciens_IT-45 17 11
Bacillus_amyloliquefaciens_XH7 18 12
Bacillus_amyloliquefaciens_LL3 18 12
Bacillus_amyloliquefaciens_TA208 18 12
Bacillus_amyloliquefaciens_DSM_7 18 12
Bacillus_licheniformis_9945A 22 15
Bacillus_subtilis_PY79 19 13
Bacillus_subtilis_XF-1 19 13
Bacillus_subtilis_QB928 19 13
Bacillus_subtilis_BSn5 19 13
Bacillus_subtilis_subsp._subtilis_str._BAB-1 19 13
Bacillus_subtilis_subsp._subtilis_str._BSP1 17 11
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 18 12
Bacillus_subtilis_subsp._subtilis_6051-HGW 19 13
Bacillus_subtilis_subsp._spizizenii_TU-B-10 20 14
Bacillus_subtilis_subsp._spizizenii_str._W23 19 13
Bacillus_subtilis_subsp._natto_BEST195 19 13
Bacillus_licheniformis_DSM_13_=_ATCC_14580 21 15
Bacillus_infantis_NRRL_B-14911 35 26
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 16 13
Bacillus_toyonensis_BCT-7112 28 22
Bacillus_thuringiensis_HD-771 27 21
Bacillus_thuringiensis_HD-789 27 21
Bacillus_thuringiensis_MC28 30 23
Bacillus_thuringiensis_serovar_chinensis_CT-43 28 22
Bacillus_thuringiensis_YBT-1518 28 22
Bacillus_thuringiensis_Bt407 28 22
Bacillus_thuringiensis_serovar_konkukian_str._97-27 30 23
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 29 23
Bacillus_thuringiensis_BMB171 28 22
Bacillus_thuringiensis_serovar_finitimus_YBT-020 28 22
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 29 23
Bacillus_cereus_FRI-35 26 22
Bacillus_cereus_biovar_anthracis_str._CI 26 21
Bacillus_cereus_AH820 27 21
Bacillus_cereus_AH187 24 20
Bacillus_cereus_B4264 28 22
Bacillus_cereus_G9842 28 22
Bacillus_cereus_Q1 25 21
Bacillus_cereus_F837/76 28 22
Bacillus_cereus_NC7401 24 20
Bacillus_cereus_E33L 27 22
Bacillus_cereus_ATCC_14579 25 20
Bacillus_cereus_ATCC_10987 24 20
Bacillus_anthracis_str._H9401 24 20
Bacillus_anthracis_str._CDC_684 24 20
Bacillus_anthracis_str._'Ames_Ancestor' 23 19
Bacillus_anthracis_str._Sterne 24 20
Bacillus_anthracis_str._Ames 21 18
Bacillus_megaterium_WSH-002 49 33
Bacillus_megaterium_QM_B1551 48 33
Bacillus_coagulans_36D1 15 13
Staphylococcus_aureus_subsp._aureus_MSHR1132 2 2
Staphylococcus_pseudintermedius_ED99 2 2
Staphylococcus_pasteuri_SP1 2 2
Staphylococcus_lugdunensis_N920143 3 3
Staphylococcus_warneri_SG1 3 3
Staphylococcus_epidermidis_ATCC_12228 2 2
Staphylococcus_aureus_CA-347 2 2
Staphylococcus_aureus_Bmb9393 2 2
Staphylococcus_aureus_M1 2 2
Staphylococcus_aureus_08BA02176 2 2
Staphylococcus_aureus_ST228/18412 2 2
Staphylococcus_aureus_ST228/18341 2 2
Staphylococcus_aureus_ST228/16125 2 2
Staphylococcus_aureus_ST228/16035 2 2
Staphylococcus_aureus_ST228/15532 2 2
Staphylococcus_aureus_ST228/10497 2 2
Staphylococcus_aureus_ST228/10388 2 2
Staphylococcus_aureus_04-02981 2 2
Staphylococcus_aureus_RF122 2 2
Staphylococcus_aureus_subsp._aureus_Z172 2 2
Staphylococcus_aureus_subsp._aureus_6850 2 2
Staphylococcus_aureus_subsp._aureus_SA957 2 2
Staphylococcus_aureus_subsp._aureus_CN1 2 2
Staphylococcus_aureus_subsp._aureus_SA40 2 2
Staphylococcus_aureus_subsp._aureus_11819-97 2 2
Staphylococcus_aureus_subsp._aureus_M013 2 2
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 2 2
Staphylococcus_aureus_subsp._aureus_VC40 2 2
Staphylococcus_aureus_subsp._aureus_T0131 2 2
Staphylococcus_aureus_subsp._aureus_LGA251 2 2
Staphylococcus_aureus_subsp._aureus_ECT-R_2 2 2
Staphylococcus_aureus_subsp._aureus_JKD6159 2 2
Staphylococcus_aureus_subsp._aureus_ED133 2 2
Staphylococcus_aureus_subsp._aureus_ED98 2 2
Staphylococcus_aureus_subsp._aureus_TW20 2 2
Staphylococcus_aureus_subsp._aureus_55/2053 2 2
Staphylococcus_aureus_subsp._aureus_TCH60 2 2
Staphylococcus_aureus_subsp._aureus_str._JKD6008 2 2
Staphylococcus_aureus_subsp._aureus_71193 2 2
Staphylococcus_aureus_subsp._aureus_S0385 2 2
Staphylococcus_aureus_subsp._aureus_str._Newman 2 2
Staphylococcus_aureus_subsp._aureus_Mu3 2 2
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 2 2
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 2 2
Staphylococcus_aureus_subsp._aureus_JH9 2 2
Staphylococcus_aureus_subsp._aureus_MSSA476 2 2
Staphylococcus_aureus_subsp._aureus_MRSA252 2 2
Staphylococcus_aureus_subsp._aureus_MW2 2 2
Staphylococcus_aureus_subsp._aureus_N315 2 2
Staphylococcus_aureus_subsp._aureus_Mu50 2 2
Staphylococcus_aureus_subsp._aureus_COL 2 2
Staphylococcus_aureus_subsp._aureus_NCTC_8325 2 2
Chlorobium_phaeobacteroides_BS1 5 4
Salinibacter_ruber_DSM_13855 94 33
Rhodothermus_marinus_SG0.5JP17-172 27 15
Echinicola_vietnamensis_DSM_17526 36 16
Emticicia_oligotrophica_DSM_17448 64 18
Prevotella_sp._oral_taxon_299_str._F0039 1 1
Prevotella_dentalis_DSM_3688 1 1
Porphyromonas_gingivalis_TDC60 3 3
Porphyromonas_gingivalis_W83 3 3
Alistipes_shahii_WAL_8301 4 4
Bacteroides_xylanisolvens_XB1A 20 12
Bacteroides_fragilis_638R 25 15
Bacteroides_fragilis_NCTC_9343 25 14
Nonlabens_dokdonensis_DSW-6 5 3
Psychroflexus_torquis_ATCC_700755 21 9
Fibrobacter_succinogenes_subsp._succinogenes_S85 7 6
Chlamydia_pecorum_P787 1 1
Chlamydia_pecorum_W73 1 1
Chlamydia_pecorum_PV3056/3 1 1
Chlamydophila_pneumoniae_LPCoLN 1 1
Chlamydophila_pneumoniae_J138 1 1
Chlamydophila_pneumoniae_CWL029 1 1
Chlamydophila_pneumoniae_AR39 1 1
Chlamydia_psittaci_01DC12 1 1
Chlamydia_psittaci_WC 1 1
Chlamydia_psittaci_M56 1 1
Chlamydia_psittaci_WS/RT/E30 1 1
Chlamydia_psittaci_VS225 1 1
Chlamydia_psittaci_MN 1 1
Chlamydia_psittaci_GR9 1 1
Chlamydia_psittaci_84/55 1 1
Chlamydia_psittaci_08DC60 1 1
Chlamydia_psittaci_02DC15 1 1
Chlamydia_psittaci_C19/98 1 1
Chlamydia_psittaci_NJ1 1 1
Chlamydia_psittaci_CP3 1 1
Chlamydophila_psittaci_RD1 1 1
Chlamydia_psittaci_Mat116 1 1
Chlamydophila_psittaci_6BC 1 1
Chlamydophila_psittaci_6BC 1 1
Chlamydia_trachomatis_C/TW-3 1 1
Chlamydia_trachomatis_L2/434/Bu(f) 1 1
Chlamydia_trachomatis_L2/434/Bu(i) 1 1
Chlamydia_trachomatis_IU888 1 1
Chlamydia_trachomatis_IU824 1 1
Chlamydia_trachomatis_L2b/Canada2 1 1
Chlamydia_trachomatis_L2b/Canada1 1 1
Chlamydia_trachomatis_L3/404/LN 1 1
Chlamydia_trachomatis_L2b/Ams5 1 1
Chlamydia_trachomatis_L2b/Ams4 1 1
Chlamydia_trachomatis_L2b/Ams3 1 1
Chlamydia_trachomatis_L2b/Ams2 1 1
Chlamydia_trachomatis_L2b/Ams1 1 1
Chlamydia_trachomatis_L2b/795 1 1
Chlamydia_trachomatis_L2b/CV204 1 1
Chlamydia_trachomatis_L2b/LST 1 1
Chlamydia_trachomatis_L2b/UCH-2 1 1
Chlamydia_trachomatis_L2b/8200/07 1 1
Chlamydia_trachomatis_L2/25667R 1 1
Chlamydia_trachomatis_L1/224 1 1
Chlamydia_trachomatis_L1/115 1 1
Chlamydia_trachomatis_L1/440/LN 1 1
Chlamydia_trachomatis_K/SotonK1 1 1
Chlamydia_trachomatis_Ia/SotonIa3 1 1
Chlamydia_trachomatis_Ia/SotonIa1 1 1
Chlamydia_trachomatis_G/SotonG1 1 1
Chlamydia_trachomatis_F/SotonF3 1 1
Chlamydia_trachomatis_F/SW5 1 1
Chlamydia_trachomatis_F/SW4 1 1
Chlamydia_trachomatis_E/SotonE8 1 1
Chlamydia_trachomatis_E/SotonE4 1 1
Chlamydia_trachomatis_E/SW3 1 1
Chlamydia_trachomatis_D/SotonD6 1 1
Chlamydia_trachomatis_D/SotonD5 1 1
Chlamydia_trachomatis_D/SotonD1 1 1
Chlamydia_trachomatis_A/5291 1 1
Chlamydia_trachomatis_A/363 1 1
Chlamydia_trachomatis_RC-J/971 1 1
Chlamydia_trachomatis_RC-L2/55 1 1
Chlamydia_trachomatis_J/6276tet1 1 1
Chlamydia_trachomatis_RC-J/966 1 1
Chlamydia_trachomatis_RC-J(s)/122 1 1
Chlamydia_trachomatis_RC-F(s)/342 1 1
Chlamydia_trachomatis_RC-L2(s)/3 1 1
Chlamydia_trachomatis_RC-J/953 1 1
Chlamydia_trachomatis_RC-J943 1 1
Chlamydia_trachomatis_RC-Fs852 1 1
Chlamydia_trachomatis_RC-L2s46 1 1
Chlamydia_trachomatis_RC-F69 1 1
Chlamydia_trachomatis_L2c 1 1
Chlamydia_trachomatis_D-LC 1 1
Chlamydia_trachomatis_D-EC 1 1
Chlamydia_trachomatis_G/9301 1 1
Chlamydia_trachomatis_G/11074 1 1
Chlamydia_trachomatis_G/11222 1 1
Chlamydia_trachomatis_G/9768 1 1
Chlamydia_trachomatis_E/150 1 1
Chlamydia_trachomatis_E/11023 1 1
Chlamydia_trachomatis_B/TZ1A828/OT 1 1
Chlamydia_trachomatis_Sweden2 1 1
Chlamydia_trachomatis_E/Bour 1 1
Chlamydia_trachomatis_A2497 1 1
Chlamydia_trachomatis_A2497 1 1
Chlamydia_trachomatis_L2b/UCH-1/proctitis 1 1
Chlamydia_trachomatis_434/Bu 1 1
Chlamydia_trachomatis_A/HAR-13 1 1
Chlamydia_trachomatis_D/UW-3/CX 1 1
Singulisphaera_acidiphila_DSM_18658 58 31
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 35 22
Leptospira_interrogans_serovar_Lai_str._56601 51 33
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 51 32
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 80 41
Borrelia_garinii_NMJW1 1 1
Borrelia_garinii_BgVir 1 1
Borrelia_afzelii_HLJ01 1 1
Borrelia_afzelii_PKo 1 1
Borrelia_burgdorferi_CA382 1 1
Borrelia_burgdorferi_JD1 1 1
Borrelia_burgdorferi_N40 1 1
Treponema_pedis_str._T_A4 1 1
Spirochaeta_thermophila_DSM_6578 31 24
Thermotoga_maritima_MSB8 5 4
Hydrogenobacter_thermophilus_TK-6 7 5
Leptospirillum_ferriphilum_ML-04 28 20
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 3 3
Fusobacterium_nucleatum_subsp._animalis_4_8 3 3
Acidithiobacillus_ferrooxidans_ATCC_23270 8 7
Bdellovibrio_exovorus_JSS 13 8
Bdellovibrio_bacteriovorus_str._Tiberius 32 22
Arcobacter_butzleri_7h1h 26 19
Arcobacter_butzleri_ED-1 34 24
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 5 4
Campylobacter_jejuni_RM1221 5 4
Campylobacter_jejuni_subsp._jejuni_00-2544 4 3
Campylobacter_jejuni_subsp._jejuni_00-2538 4 3
Campylobacter_jejuni_subsp._jejuni_00-2426 5 4
Campylobacter_jejuni_subsp._jejuni_00-2425 4 3
Campylobacter_jejuni_subsp._jejuni_PT14 5 4
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 5 4
Campylobacter_jejuni_subsp._jejuni_S3 5 4
Campylobacter_jejuni_subsp._jejuni_M1 5 4
Campylobacter_jejuni_subsp._jejuni_IA3902 3 3
Campylobacter_jejuni_subsp._jejuni_81116 5 4
Campylobacter_jejuni_subsp._jejuni_81-176 5 4
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 5 4
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 5 4
Campylobacter_coli_76339 5 4
Campylobacter_coli_15-537360 3 3
Campylobacter_coli_CVM_N29710 3 3
Helicobacter_cetorum_MIT_99-5656 1 1
Desulfocapsa_sulfexigens_DSM_10523 109 77
Desulfobacula_toluolica_Tol2 124 94
Lawsonia_intracellularis_N343 2 2
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 222 148
Desulfovibrio_vulgaris_RCH1 126 74
Desulfovibrio_vulgaris_str._'Miyazaki_F' 137 83
Desulfovibrio_vulgaris_str._Hildenborough 124 74
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 173 106
Desulfovibrio_desulfuricans_ND132 97 57
Geobacter_sp._M18 190 105
Geobacter_sulfurreducens_PCA 93 66
Sorangium_cellulosum_So0157-2 211 126
Anaeromyxobacter_sp._K 38 31
Anaeromyxobacter_dehalogenans_2CP-C 40 30
Myxococcus_stipitatus_DSM_14675 83 52
Neisseria_meningitidis_WUE_2594 1 1
Neisseria_meningitidis_G2136 1 1
Neisseria_meningitidis_M04-240196 1 1
Neisseria_meningitidis_M01-240149 1 1
Neisseria_meningitidis_NZ-05/33 1 1
Neisseria_meningitidis_M01-240355 1 1
Neisseria_meningitidis_8013 1 1
Neisseria_meningitidis_053442 1 1
Neisseria_meningitidis_Z2491 1 1
Neisseria_meningitidis_H44/76 1 1
Neisseria_meningitidis_alpha710 1 1
Neisseria_meningitidis_MC58 1 1
Neisseria_gonorrhoeae_TCDC-NG08107 1 1
Neisseria_gonorrhoeae_FA_1090 1 1
Burkholderia_phenoliruptrix_BR3459a 57 40
Pandoraea_pnomenusa_3kgm 26 22
Ralstonia_pickettii_12J 48 33
Ralstonia_solanacearum_FQY_4 39 27
Ralstonia_solanacearum_Po82 42 29
Ralstonia_solanacearum_PSI07 40 27
Ralstonia_solanacearum_CMR15 40 27
Ralstonia_solanacearum_GMI1000 41 28
Polynucleobacter_necessarius_subsp._necessarius_STIR1 3 3
Burkholderia_sp._YI23 69 49
Burkholderia_sp._CCGE1003 50 37
Burkholderia_sp._CCGE1001 54 36
Burkholderia_sp._KJ006 45 36
Burkholderia_thailandensis_MSMB121 30 26
Burkholderia_pseudomallei_MSHR305 29 26
Burkholderia_pseudomallei_NCTC_13179 29 26
Burkholderia_pseudomallei_BPC006 29 26
Burkholderia_pseudomallei_1026b 29 26
Burkholderia_pseudomallei_MSHR346 12 11
Burkholderia_pseudomallei_668 29 26
Burkholderia_pseudomallei_1710b 29 26
Burkholderia_pseudomallei_K96243 29 26
Burkholderia_mallei_NCTC_10229 22 19
Burkholderia_mallei_NCTC_10247 22 19
Burkholderia_mallei_ATCC_23344 24 21
Burkholderia_lata 32 26
Burkholderia_ambifaria_MC40-6 46 37
Burkholderia_cenocepacia_MC0-3 40 32
Burkholderia_cenocepacia_AU_1054 26 23
Burkholderia_cenocepacia_J2315 36 29
Burkholderia_multivorans_ATCC_17616 44 35
Burkholderia_cepacia_GG4 27 25
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 174 77
Alicycliphilus_denitrificans_BC 44 31
Variovorax_paradoxus_B4 29 22
Variovorax_paradoxus_EPS 25 19
Taylorella_asinigenitalis_14/45 4 3
Taylorella_equigenitalis_14/56 4 3
Taylorella_equigenitalis_ATCC_35865 4 3
Bordetella_pertussis_CS 7 6
Bordetella_parapertussis_18323 7 6
Bordetella_parapertussis_Bpp5 11 10
Bordetella_bronchiseptica_MO149 15 13
Bordetella_bronchiseptica_253 16 14
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 28 21
Nitrosomonas_sp._AL212 30 22
Sulfuricella_denitrificans_skB26 90 49
Caulobacter_crescentus_CB15 47 30
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 2 2
Zymomonas_mobilis_subsp._mobilis_CP4 2 2
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 2 2
Zymomonas_mobilis_subsp._mobilis_ZM4 2 2
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 4 4
Phaeobacter_gallaeciensis_DSM_17395 20 18
Phaeobacter_gallaeciensis_DSM_26640 23 20
Leisingera_methylohalidivorans_DSM_14336 20 15
Octadecabacter_antarcticus_307 11 9
Octadecabacter_arcticus_238 8 8
Rhodobacter_sphaeroides_KD131 49 29
Rhodobacter_sphaeroides_ATCC_17025 44 29
Rhodobacter_sphaeroides_2.4.1 44 29
Paracoccus_aminophilus_JCM_7686 18 11
Magnetospirillum_gryphiswaldense_MSR-1_v2 145 97
Rhodospirillum_rubrum_ATCC_11170 90 55
Gluconacetobacter_diazotrophicus_PAl_5 18 14
Gluconobacter_oxydans_H24 12 8
Acetobacter_pasteurianus_386B 4 4
Acetobacter_pasteurianus_IFO_3283-12 4 4
Acetobacter_pasteurianus_IFO_3283-01-42C 4 4
Acetobacter_pasteurianus_IFO_3283-32 4 4
Acetobacter_pasteurianus_IFO_3283-26 4 4
Acetobacter_pasteurianus_IFO_3283-22 4 4
Acetobacter_pasteurianus_IFO_3283-07 4 4
Acetobacter_pasteurianus_IFO_3283-03 4 4
Micavibrio_aeruginosavorus_EPB 25 16
Ehrlichia_muris_AS145 2 2
Ehrlichia_ruminantium_str._Welgevonden 1 1
Ehrlichia_ruminantium_str._Welgevonden 1 1
Anaplasma_phagocytophilum_str._Dog2 1 1
Anaplasma_phagocytophilum_str._HZ2 1 1
Anaplasma_phagocytophilum_str._JM 1 1
Anaplasma_marginale_str._Dawn 1 1
Anaplasma_marginale_str._Gypsy_Plains 1 1
Anaplasma_marginale_str._St._Maries 1 1
Methylobacterium_extorquens_DM4 143 78
Methylobacterium_extorquens_PA1 149 80
Brucella_ceti_TE10759-12 16 11
Brucella_ceti_TE28753-12 14 9
Brucella_canis_HSK_A52141 16 11
Brucella_suis_VBI22 16 11
Brucella_suis_1330 16 11
Brucella_suis_1330 16 11
Brucella_melitensis_NI 16 11
Brucella_melitensis_M5-90 16 11
Brucella_melitensis_M28 16 11
Brucella_melitensis_bv._1_str._16M 17 11
Brucella_abortus_A13334 16 11
Brucella_melitensis_biovar_Abortus_2308 13 10
Brucella_abortus_bv._1_str._9-941 16 11
Sinorhizobium_fredii_USDA_257 51 34
Sinorhizobium_fredii_HH103 49 32
Sinorhizobium_meliloti_2011 33 21
Sinorhizobium_meliloti_GR4 57 30
Sinorhizobium_meliloti_Rm41 48 26
Sinorhizobium_meliloti_SM11 47 27
Sinorhizobium_meliloti_BL225C 49 27
Sinorhizobium_meliloti_1021 46 26
Rhizobium_etli_CFN_42 69 40
Rhizobium_etli_bv._mimosae_str._Mim1 62 39
Rhizobium_tropici_CIAT_899 44 29
Rhizobium_leguminosarum_bv._trifolii_WSM2304 70 46
Rhizobium_leguminosarum_bv._trifolii_WSM1325 88 56
Liberibacter_crescens_BT-1 9 6
Candidatus_Liberibacter_solanacearum_CLso-ZC1 5 4
Candidatus_Liberibacter_americanus_str._Sao_Paulo 6 4
Candidatus_Liberibacter_asiaticus_str._gxpsy 6 4
Mesorhizobium_australicum_WSM2073 48 30
Hyphomicrobium_nitrativorans_NL23 17 13
Hyphomicrobium_denitrificans_1NES1 26 18
Oligotropha_carboxidovorans_OM5 35 24
Oligotropha_carboxidovorans_OM5 35 24
Rhodopseudomonas_palustris_DX-1 78 52
Rhodopseudomonas_palustris_TIE-1 93 61
Rhodopseudomonas_palustris_HaA2 79 49
Rhodopseudomonas_palustris_BisB5 69 45
Rhodopseudomonas_palustris_BisB18 71 43
Rhodopseudomonas_palustris_CGA009 88 60
Bradyrhizobium_sp._S23321 90 53
Bradyrhizobium_sp._BTAi1 93 56
Bradyrhizobium_oligotrophicum_S58 89 57
Bradyrhizobium_japonicum_USDA_6 106 65
Bartonella_australis_Aust/NH1 8 6
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 9 7
Bartonella_quintana_RM-11 9 7
Simiduia_agarivorans_SA1_=_DSM_21679 44 30
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 2 2
Haemophilus_somnus_2336 1 1
Mannheimia_haemolytica_USMARC_2286 2 2
Mannheimia_haemolytica_M42548 2 2
Mannheimia_haemolytica_D174 2 2
Mannheimia_haemolytica_D171 2 2
Mannheimia_haemolytica_D153 2 2
Mannheimia_haemolytica_USDA-ARS-USMARC-183 2 2
Mannheimia_haemolytica_USDA-ARS-USMARC-185 2 2
Pasteurella_multocida_36950 1 1
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1 1
Haemophilus_parasuis_ZJ0906 1 1
Haemophilus_influenzae_KR494 1 1
Haemophilus_influenzae_F3047 1 1
Haemophilus_influenzae_F3031 1 1
Haemophilus_influenzae_10810 1 1
Haemophilus_influenzae_PittGG 1 1
Haemophilus_influenzae_86-028NP 1 1
Haemophilus_influenzae_R2866 1 1
Haemophilus_influenzae_R2846 1 1
Haemophilus_influenzae_Rd_KW20 1 1
Actinobacillus_suis_H91-0380 2 2
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1 1
Aeromonas_hydrophila_ML09-119 57 42
Vibrio_fischeri_ES114 20 18
Vibrio_sp._EJY3 29 24
Vibrio_parahaemolyticus_BB22OP 34 28
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 35 27
Vibrio_anguillarum_Listonella_anguillarum_M3 24 22
Vibrio_nigripulchritudo_VibrioScope 63 46
Vibrio_vulnificus_CMCP6 37 33
Vibrio_vulnificus_YJ016 37 33
Vibrio_cholerae_LMA3984-4 31 26
Vibrio_cholerae_M66-2 34 28
Vibrio_cholerae_O395 34 28
Vibrio_cholerae_IEC224 34 28
Vibrio_cholerae_O1_str._2010EL-1786 34 28
Vibrio_cholerae_MJ-1236 35 29
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 35 29
Idiomarina_loihiensis_GSL_199 32 27
Shewanella_sp._W3-18-1 48 34
Shewanella_sp._ANA-3 59 39
Shewanella_baltica_BA175 62 41
Shewanella_baltica_OS678 52 35
Shewanella_baltica_OS117 56 37
Shewanella_baltica_OS223 57 38
Shewanella_baltica_OS195 52 35
Shewanella_baltica_OS155 53 38
Shewanella_sp._MR-7 56 38
Shewanella_putrefaciens_200 44 31
Glaciecola_psychrophila_170 43 32
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 43 33
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 43 33
Alteromonas_macleodii_str._'Ionian_Sea_U8' 67 42
Alteromonas_macleodii_str._'Ionian_Sea_U7' 67 42
Alteromonas_macleodii_str._'Ionian_Sea_U4' 67 42
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 41 32
Alteromonas_macleodii_str._'English_Channel_615' 44 30
Alteromonas_macleodii_AltDE1 43 33
Alteromonas_macleodii_str._'English_Channel_673' 64 41
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 64 39
Alteromonas_macleodii_str._'Black_Sea_11' 68 43
Alteromonas_macleodii_ATCC_27126 67 42
Alcanivorax_dieselolei_B5 15 13
Thalassolituus_oleivorans_MIL-1 44 32
Stenotrophomonas_maltophilia_D457 40 27
Stenotrophomonas_maltophilia_JV3 39 26
Stenotrophomonas_maltophilia_R551-3 38 26
Xylella_fastidiosa_subsp._fastidiosa_GB514 5 4
Xylella_fastidiosa_M12 4 3
Xylella_fastidiosa_Temecula1 5 4
Xylella_fastidiosa_9a5c 5 4
Xanthomonas_citri_subsp._citri_Aw12879 49 31
Xanthomonas_campestris_pv._vesicatoria_str._85-10 48 30
Xanthomonas_axonopodis_pv._citrumelo_F1 48 30
Xanthomonas_axonopodis_Xac29-1 45 29
Xanthomonas_oryzae_pv._oryzicola_BLS256 38 26
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 32 21
Xanthomonas_oryzae_pv._oryzae_KACC_10331 31 20
Xanthomonas_campestris_pv._raphani_756C 59 35
Xanthomonas_campestris_pv._campestris_str._8004 54 33
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 54 33
Spiribacter_salinus_M19-40 7 7
Thioalkalivibrio_nitratireducens_DSM_14787 30 20
Thioflavicoccus_mobilis_8321 55 31
Coxiella_burnetii_CbuK_Q154 6 5
Coxiella_burnetii_CbuG_Q212 8 6
Coxiella_burnetii_RSA_331 7 5
Coxiella_burnetii_RSA_493 7 5
Legionella_pneumophila_str._Paris 23 18
Legionella_pneumophila_str._Lens 20 16
Legionella_pneumophila_subsp._pneumophila_LPE509 25 20
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 23 18
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 23 18
Legionella_pneumophila_subsp._pneumophila 22 17
Legionella_pneumophila_subsp._pneumophila 23 18
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 23 18
Legionella_pneumophila_2300/99_Alcoy 22 18
Proteus_mirabilis_BB2000 7 7
Morganella_morganii_subsp._morganii_KT 7 7
Edwardsiella_tarda_C07-087 15 12
Edwardsiella_tarda_FL6-60 15 12
Rahnella_aquatilis_HX2 25 18
Yersinia_pseudotuberculosis_PB1/+ 14 10
Yersinia_pseudotuberculosis_YPIII 14 10
Yersinia_pseudotuberculosis_IP_32953 14 10
Yersinia_pestis_biovar_Microtus_str._91001 14 10
Yersinia_pestis_A1122 13 9
Yersinia_pestis_Z176003 15 11
Yersinia_pestis_D182038 13 9
Yersinia_pestis_D106004 14 10
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 14 11
Yersinia_pestis_Nepal516 14 11
Yersinia_pestis_Antiqua 14 10
Yersinia_pestis_Angola 12 8
Yersinia_pestis_CO92 13 9
Yersinia_pestis_KIM10+ 13 10
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 29 19
Yersinia_enterocolitica_subsp._palearctica_Y11 29 19
Serratia_sp._AS13 19 16
Serratia_plymuthica_S13 21 17
Serratia_plymuthica_4Rx13 19 15
Serratia_marcescens_FGI94 13 11
Serratia_marcescens_WW4 21 14
Serratia_liquefaciens_ATCC_27592 21 15
Dickeya_dadantii_Ech586 24 19
Dickeya_dadantii_3937 21 17
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 15 13
Pantoea_ananatis_LMG_5342 23 18
Pantoea_ananatis_PA13 23 18
Pantoea_ananatis_AJ13355 23 18
Erwinia_pyrifoliae_DSM_12163 10 7
Erwinia_amylovora_CFBP1430 14 9
Cronobacter_sakazakii_CMCC_45402 14 11
Cronobacter_sakazakii_SP291 14 11
Cronobacter_sakazakii_ATCC_BAA-894 14 11
Raoultella_ornithinolytica_B6 13 13
Shigella_sonnei_53G 15 12
Shigella_flexneri_2002017 6 6
Shigella_flexneri_2a_str._2457T 6 6
Shigella_flexneri_2a_str._301 6 6
Shigella_dysenteriae_1617 13 11
Shigella_boydii_Sb227 11 10
Salmonella_bongori_N268-08 11 10
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 9 8
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 12 11
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 11 10
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 12 11
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 12 11
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 12 11
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 12 11
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 12 11
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 12 11
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 9 9
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 11 10
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 12 11
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 11 10
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 12 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 12 11
Salmonella_enterica_serovar_Bovismorbificans_genomics 12 11
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 12 11
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 11 10
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 12 11
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 12 11
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 12 11
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 10 9
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 10 9
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 12 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 11 10
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 12 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 12 11
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 12 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 11 10
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 11 10
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 12 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 11 10
Klebsiella_oxytoca_KCTC_1686 10 10
Klebsiella_pneumoniae_JM45 9 9
Klebsiella_pneumoniae_CG43 11 11
Klebsiella_pneumoniae_KCTC_2242 11 11
Klebsiella_pneumoniae_342 11 11
Klebsiella_pneumoniae_subsp._pneumoniae_1084 9 9
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 11 11
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 10 10
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 8 8
Enterobacter_aerogenes_EA1509E 10 10
Escherichia_coli_E24377A 16 13
Escherichia_coli_E._coli_PMV-1 18 15
Escherichia_coli_JJ1886 18 15
Escherichia_coli_LY180 16 13
Escherichia_coli_APEC_O78 17 14
Escherichia_coli_O7:K1_str._CE10 15 13
Escherichia_coli_O104:H4_str._2009EL-2050 16 13
Escherichia_coli_O104:H4_str._2009EL-2071 16 13
Escherichia_coli_O104:H4_str._2011C-3493 16 13
Escherichia_coli_NA114 17 14
Escherichia_coli_P12b 13 10
Escherichia_coli_str._'clone_D_i2' 17 14
Escherichia_coli_str._'clone_D_i14' 17 14
Escherichia_coli_UM146 19 16
Escherichia_coli_042 15 14
Escherichia_coli_Xuzhou21 10 10
Escherichia_coli_IHE3034 18 15
Escherichia_coli_UMNK88 19 16
Escherichia_coli_O83:H1_str._NRG_857C 18 15
Escherichia_coli_ABU_83972 17 14
Escherichia_coli_KO11FL 16 13
Escherichia_coli_KO11FL 16 13
Escherichia_coli_LF82 17 14
Escherichia_coli_ED1a 17 14
Escherichia_coli_IAI39 15 13
Escherichia_coli_UMN026 18 15
Escherichia_coli_55989 16 13
Escherichia_coli_S88 17 14
Escherichia_coli_IAI1 16 13
Escherichia_coli_W 16 13
Escherichia_coli_W 16 13
Escherichia_coli_DH1 17 14
Escherichia_coli_DH1 17 14
Escherichia_coli_ATCC_8739 17 14
Escherichia_coli_BL21(DE3) 16 13
Escherichia_coli_BL21(DE3) 16 13
Escherichia_coli_SMS-3-5 19 16
Escherichia_coli_SE15 18 15
Escherichia_coli_SE11 16 13
Escherichia_coli_APEC_O1 18 15
Escherichia_coli_O103:H2_str._12009 14 12
Escherichia_coli_UTI89 19 16
Escherichia_coli_536 17 14
Escherichia_coli_HS 14 13
Escherichia_coli_ETEC_H10407 18 15
Escherichia_coli_O55:H7_str._RM12579 16 13
Escherichia_coli_O55:H7_str._CB9615 16 13
Escherichia_coli_O26:H11_str._11368 13 12
Escherichia_coli_CFT073 17 14
Escherichia_coli_O111:H-_str._11128 15 12
Escherichia_coli_O127:H6_str._E2348/69 14 13
Escherichia_coli_O157:H7_str._TW14359 10 10
Escherichia_coli_O157:H7_str._EC4115 9 9
Escherichia_coli_O157:H7_str._Sakai 10 10
Escherichia_coli_O157:H7_str._EDL933 15 12
Escherichia_coli_str._K-12_substr._MDS42 16 13
Escherichia_coli_BW2952 17 14
Escherichia_coli_str._K-12_substr._MG1655 17 14
Escherichia_coli_str._K-12_substr._W3110 17 14
Escherichia_coli_str._K-12_substr._DH10B 18 15
Escherichia_coli_B_str._REL606 16 13
Enterobacter_cloacae_SCF1 23 20
Enterobacter_cloacae_EcWSU1 14 12
Enterobacter_cloacae_subsp._cloacae_ENHKU01 14 12
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 7 7
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 15 12
Azotobacter_vinelandii_CA6 28 24
Azotobacter_vinelandii_CA 29 25
Pseudomonas_denitrificans_ATCC_13867 57 39
Pseudomonas_syringae_pv._phaseolicola_1448A 67 47
Pseudomonas_syringae_pv._syringae_B728a 78 51
Pseudomonas_stutzeri_CCUG_29243 75 49
Pseudomonas_stutzeri_DSM_10701 55 34
Pseudomonas_stutzeri_DSM_4166 82 54
Pseudomonas_stutzeri_RCH2 83 52
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 77 51
Pseudomonas_monteilii_SB3101 67 53
Pseudomonas_monteilii_SB3078 67 53
Pseudomonas_putida_H8234 77 54
Pseudomonas_putida_HB3267 68 52
Pseudomonas_putida_NBRC_14164 73 53
Pseudomonas_putida_DOT-T1E 74 55
Pseudomonas_putida_S16 66 50
Pseudomonas_putida_BIRD-1 69 51
Pseudomonas_putida_W619 70 46
Pseudomonas_putida_ND6 72 53
Pseudomonas_putida_KT2440 67 50
Pseudomonas_putida_GB-1 71 52
Pseudomonas_protegens_CHA0 79 53
Pseudomonas_poae_RE*1-1-14 65 46
Pseudomonas_fluorescens_F113 77 51
Pseudomonas_fluorescens_A506 64 42
Pseudomonas_fluorescens_R124 66 43
Pseudomonas_fluorescens_Pf0-1 75 46
Pseudomonas_resinovorans_NBRC_106553 90 58
Pseudomonas_mendocina_NK-01 79 49
Pseudomonas_aeruginosa_SCV20265 68 44
Pseudomonas_aeruginosa_MTB-1 67 43
Pseudomonas_aeruginosa_LES431 68 44
Pseudomonas_aeruginosa_RP73 68 44
Pseudomonas_aeruginosa_B136-33 70 45
Pseudomonas_aeruginosa_PA1R 58 38
Pseudomonas_aeruginosa_PA1 64 42
Pseudomonas_aeruginosa_DK2 63 41
Pseudomonas_aeruginosa_NCGM2.S1 68 44
Pseudomonas_aeruginosa_M18 67 43
Pseudomonas_aeruginosa_LESB58 68 44
Pseudomonas_aeruginosa_PA7 68 44
Pseudomonas_aeruginosa_PAO1 67 43
Acinetobacter_genomosp._13TU__RUH2624 11 8
Acinetobacter_sp.__SH024 10 7
Acinetobacter_calcoaceticus_ruh2202 11 8
Acinetobacter_baumannii_ZW85-1 12 9
Acinetobacter_baumannii_TYTH-1 10 7
Acinetobacter_baumannii_BJAB0868 12 9
Acinetobacter_baumannii_BJAB0715 12 9
Acinetobacter_baumannii_BJAB07104 12 9
Acinetobacter_baumannii_TCDC-AB0715 12 9
Acinetobacter_baumannii_D1279779 12 9
Acinetobacter_baumannii_MDR-TJ 12 9
Acinetobacter_baumannii_1656-2 12 9
Acinetobacter_baumannii__ATCC_19606 12 9
Acinetobacter_baumannii_AB307-0294 12 9
Acinetobacter_baumannii_AYE 12 9
Acinetobacter_baumannii_SDF 7 5
Acinetobacter_baumannii_MDR-ZJ06 12 9
Acinetobacter_baumannii_AB0057 11 8
Acinetobacter_baumannii_ACICU 12 9
Acinetobacter_radioresistens__SH164 10 7
Acinetobacter_junii__SH205 6 5
Acinetobacter_johnsonii__SH046 12 9
Acinetobacter_lwoffii__SH145 11 8
Methylophaga_sp._JAM7 34 21
Cycloclasticus_zancles_7-ME 20 14
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1
Francisella_tularensis_subsp._holarctica_OSU18 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 1 1
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 4 3
Methanomethylovorans_hollandica_DSM_15978 38 14
Methanolobus_psychrophilus_R15 112 44
Methanosarcina_mazei_Tuc01 77 32
Methanoregula_formicica_Methanoregula_formicicum_SMSP 169 64
Archaeoglobus_sulfaticallidus_PM70-1 36 12
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 1 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 3 2
Halovivax_ruber_XH-70 31 21
Natrinema_pellirubrum_DSM_15624 82 36
Natronococcus_occultus_SP4 86 35
Natronobacterium_gregoryi_SP2 38 19
Haloquadratum_walsbyi_C23 29 12
Halorhabdus_tiamatea_SARL4B 31 15
Natronomonas_moolapensis_8.8.11 69 35
Haloarcula_hispanica_N601 79 44
Methanobacterium_sp._SWAN-1 21 11

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   52 34
Pan_troglodytes_69_2.1.4   (Chimpanzee)   50 32
Gorilla_gorilla_69_3.1   (Western gorilla)   53 34
Pongo_abelii_69_2   (Sumatran orangutan)   49 32
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   53 34
Macaca_mulatta_69_1   (Rhesus monkey)   54 35
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   50 32
Otolemur_garnettii_69_3   (Small-eared galago)   51 34
Microcebus_murinus_69_1   (Gray mouse lemur)   44 31
Rattus_norvegicus_69_3.4   (Norway rat)   50 33
Mus_musculus_69_38   (House mouse)   51 33
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   37 28
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   44 28
Cavia_porcellus_69_3   (Domestic guinea pig)   48 31
Oryctolagus_cuniculus_69_2   (Rabbit)   47 29
Ochotona_princeps_69   (American pika)   36 28
Tupaia_belangeri_69   (Northern tree shrew)   37 28
Sus_scrofa_69_10.2   (Pig)   49 32
Bos_taurus_69_3.1   (Cattle)   45 30
Vicugna_pacos_69_1   (Alpaca)   26 18
Tursiops_truncatus_69_1   (Bottlenose dolphin)   46 32
Mustela_putorius_furo_69_1.0   (Domestic ferret)   52 35
Ailuropoda_melanoleuca_69_1   (Giant panda)   46 31
Canis_familiaris_69_3.1   (Dog)   50 33
Felis_catus_69   (Domestic cat)   29 23
Equus_caballus_69_2   (Horse)   47 32
Myotis_lucifugus_69_2.0   (Little brown bat)   44 30
Pteropus_vampyrus_69_1   (Large flying fox)   49 33
Sorex_araneus_69_1   (European shrew)   27 19
Erinaceus_europaeus_69   (Western European hedgehog)   27 22
Procavia_capensis_69_1   (Cape rock hyrax)   33 27
Loxodonta_africana_69_3   (African savanna elephant)   49 31
Echinops_telfairi_69   (Small Madagascar hedgehog)   36 22
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   31 23
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   28 20
Macropus_eugenii_69_1.0   (Tammar wallaby)   43 32
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   52 33
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   51 32
Ornithorhynchus_anatinus_69_5   (Platypus)   39 28
Petromyzon_marinus_69_7.0   (Sea lamprey)   27 18
Meleagris_gallopavo_69_2   (Turkey)   46 30
Gallus_gallus_69_2   (Chicken)   44 27
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   48 33
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   47 32
Anolis_carolinensis_69_2.0   (Green anole)   44 29
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   46 29
Latimeria_chalumnae_69_1   (Coelacanth)   56 37
Gadus_morhua_69_1   (Atlantic cod)   53 35
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   69 45
Takifugu_rubripes_69_4   (Torafugu)   71 46
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   62 41
Oryzias_latipes_69_1   (Japanese medaka)   59 40
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   68 44
Oreochromis_niloticus_69_1.0   (Nile tilapia)   70 45
Danio_rerio_69_9   (Zebrafish)   71 45
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   16 9
Ciona_intestinalis_69   (Vase tunicate)   11 7
Drosophila_melanogaster_69_5   (Fruit fly)   28 16
Caenorhabditis_elegans_69_215   (Roundworm)   12 8
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   3 3
Arabidopsis_thaliana_10   (Thale cress)   31 18

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   198 133
Homo_sapiens__(NCBI_version)   (Human)   93 60
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   51 33
Heliconius_numata__(Incomplete) 1 1
Loa_loa_v3.3_(Request)   (Eye worm)   13 9
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   10 9
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   14 9
Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1
Pinus_sylvestris__(Incomplete)   (Scots pine)   37 15
Lotus_japonicus__(Early_assembly) 20 13
Malus_x_domestica_(Duplicate)   (Apple)   48 27
Ricinus_communis__(Early_assembly)   (Castor bean)   70 46
Nicotiana_benthamiana_0.4.4_(Early_draft) 58 34
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   31 17
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   31 17
Phoenix_dactylifera__(Early_draft)   (Date palm)   19 12
Acholeplasma_laidlawii_PG-8A_(duplicate) 4 4
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 2 2
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 30 25
NCBI_plasmid_sequences_(Plasmids) 1980 1125
Protozoadb_2010_08_(Protozoadb) 220 220
NCBI_viral_sequences_(Viral) 12 10
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1406 1406
PDB_chains_(SCOP_1.75)_(PDB) 30 30
UniProt__viral_sequences_(Viral) 4 4
Protein_Data_Bank_(all_PDB_sequenc) 707 656
TargetDB__(Targets) 2430 2076
STRING_v9.0.5_(STRING) 27942 18076
Uniprot_2018_03_genome 577810 381012
NCBI_2017_08_genome 1485991 1092309

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