SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Molybdenum cofactor-binding domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Molybdenum cofactor-binding domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   4 4
Pan_troglodytes_76_2.1.4   (Chimpanzee)   2 2
Gorilla_gorilla_76_3.1   (Western gorilla)   2 2
Pongo_abelii_76_2   (Sumatran orangutan)   2 2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1 1
Papio_anubis_76   (Olive baboon)   4 4
Macaca_mulatta_76_1   (Rhesus monkey)   5 5
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   4 4
Otolemur_garnettii_76_3   (Small-eared galago)   5 5
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   4 4
Mus_musculus_76_38   (House mouse)   5 5
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   4 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   4 3
Cavia_porcellus_76_3   (Domestic guinea pig)   6 6
Oryctolagus_cuniculus_76_2   (Rabbit)   4 4
Ochotona_princeps_76   (American pika)   2 2
Tupaia_belangeri_76   (Northern tree shrew)   3 2
Sus_scrofa_76_10.2   (Pig)   3 3
Bos_taurus_76_3.1   (Cattle)   6 6
Ovis_aries_76_3.1   (Sheep)   4 4
Vicugna_pacos_76_1   (Alpaca)   3 2
Tursiops_truncatus_76_1   (Bottlenose dolphin)   4 2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   4 4
Ailuropoda_melanoleuca_76_1   (Giant panda)   4 4
Canis_familiaris_76_3.1   (Dog)   6 6
Felis_catus_76_6.2   (Domestic cat)   4 4
Equus_caballus_76_2   (Horse)   14 13
Myotis_lucifugus_76_2.0   (Little brown bat)   4 4
Pteropus_vampyrus_76_1   (Large flying fox)   2 2
Sorex_araneus_76_1   (European shrew)   4 2
Erinaceus_europaeus_76   (Western European hedgehog)   2 2
Procavia_capensis_76_1   (Cape rock hyrax)   2 2
Loxodonta_africana_76_3   (African savanna elephant)   7 7
Echinops_telfairi_76   (Small Madagascar hedgehog)   3 2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   4 4
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   3 2
Macropus_eugenii_76_1.0   (Tammar wallaby)   2 2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   7 7
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   5 5
Ornithorhynchus_anatinus_76_5   (Platypus)   18 18
Saccoglossus_kowalevskii_v3.0 17 17
Petromyzon_marinus_76_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_76_2   (Turkey)   4 4
Gallus_gallus_76_4   (Chicken)   3 3
Anas_platyrhynchos_76_1.0   (Mallard)   2 2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2 2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2 2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   3 3
Anolis_carolinensis_76_2.0   (Green anole)   3 3
Xenopus_laevis_   (African clawed frog)   2 2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2 2
Latimeria_chalumnae_76_1   (Coelacanth)   2 2
Lepisosteus_oculatus_76   (Spotted gar)   4 4
Gadus_morhua_76_1   (Atlantic cod)   3 2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   3 3
Takifugu_rubripes_76_4   (Torafugu)   4 4
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3 3
Oryzias_latipes_76_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2 2
Poecilia_formosa_76   (Amazon molly)   2 2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3 3
Astyanax_mexicanus_76   (Mexican tetra)   4 3
Danio_rerio_76_9   (Zebrafish)   4 4
Oikopleura_dioica 3 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   24 24
Ciona_intestinalis_76   (Vase tunicate)   5 5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   5 5
Adineta_vaga 11 11
Crassostrea_gigas_22   (Pacific oyster)   6 5
Lottia_gigantea_   (Owl limpet)   8 8
Helobdella_robusta_ 2 2
Capitella_sp._I_ 10 10
Danaus_plexippus_OGS1.0   (Monarch butterfly)   13 13
Heliconius_melpomene_   (Postman butterfly)   12 9
Bombyx_mori_   (Domestic silkworm)   12 12
Nasonia_vitripennis_   (Jewel wasp)   5 5
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   8 8
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5 5
Linepithema_humile_v1.1   (Argentine ant)   2 2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   9 9
Solenopsis_invicta_v.2.2.3   (Red fire ant)   5 5
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3 3
Atta_cephalotes_v1.1 4 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2 2
Lucilia_cuprina   (Australian sheep blowfly)   3 2
Drosophila_grimshawi_1.3 11 10
Drosophila_willistoni_1.3 4 4
Drosophila_pseudoobscura_2.13 7 7
Drosophila_persimilis_1.3 7 7
Drosophila_suzukii 9 4
Drosophila_yakuba_1.3 5 5
Drosophila_simulans_1.3 5 5
Drosophila_sechellia_1.3 5 5
Drosophila_melanogaster_76_5   (Fruit fly)   6 6
Drosophila_erecta_1.3 5 5
Drosophila_ananassae_1.3 8 8
Drosophila_virilis_1.2 5 5
Drosophila_mojavensis_1.3 6 6
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   13 13
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   11 11
Anopheles_darlingi_22   (American malaria mosquito)   7 6
Anopheles_gambiae_49_3j   (African malaria mosquito)   9 9
Tribolium_castaneum_3.0   (Red flour beetle)   7 7
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   1 1
Rhodnius_prolixus_22 10 9
Daphnia_pulex_   (Common water flea)   3 3
Strigamia_maritima_22 3 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1 1
Pristionchus_pacificus_ 8 7
Caenorhabditis_japonica_ 5 3
Caenorhabditis_brenneri_ 4 4
Caenorhabditis_remanei_ 9 9
Caenorhabditis_elegans_76_235   (Roundworm)   3 3
Caenorhabditis_briggsae_2 3 3
Acropora_digitifera_v1.0 7 5
Nematostella_vectensis_1.0   (Starlet sea anemone)   8 8
Amphimedon_queenslandica 20 19
Trichoplax_adhaerens_ 4 4
Proterospongia_sp._ATCC_50818_ 1 1
Monosiga_brevicollis_ 1 1
Sphaeroforma_arctica_JP610_ 4 4
Capsaspora_owczarzaki_ATCC_30864_ 2 2
Conidiobolus_coronatus_NRRL28638_v1.0 1 1
Mortierella_verticillata_NRRL_6337_ 1 1
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Heterobasidion_annosum_ 1 1
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 1 1
Magnaporthe_poae_ATCC_64411_22 1 1
Magnaporthe_grisea_70-15_ 1 1
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 1 1
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_albo-atrum_VaMs.102_ 1 1
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 1 1
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 2 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 3 3
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 2 2
Leptosphaeria_maculans_22 2 2
Setosphaeria_turcica_v1.0 2 2
Cochliobolus_miyabeanus_ATCC_44560_v1.0 2 2
Cochliobolus_victoriae_FI3_v1.0 2 2
Cochliobolus_carbonum_26-R-13_v1.0 2 2
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2 2
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 2 2
Pyrenophora_teres_f._teres_22 2 2
Pyrenophora_tritici-repentis_ 2 2
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 1 1
Dothistroma_septosporum 1 1
Septoria_musiva_v1.0 1 1
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 1 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 2 2
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 2 2
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 2 2
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   3 3
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_pastoris_GS115_ 1 1
Dictyostelium_discoideum 1 1
Dictyostelium_purpureum_ 1 1
Selaginella_moellendorffii_ 10 10
Pinus_taeda   (Loblolly pine)   2 2
Picea_abies   (Norway spruce)   2 2
Eucalyptus_grandis_v201   (Rose gum)   5 5
Theobroma_cacao_B97-61/B2_v1   (Cacao)   7 7
Gossypium_raimondii_v221 12 12
Citrus_clementina_v165 5 5
Citrus_sinensis_v154   (Sweet orange)   13 13
Thellungiella_halophila_v173 9 9
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   12 10
Capsella_rubella_v183 6 6
Arabidopsis_lyrata_   (Lyrate rockcress)   6 6
Arabidopsis_thaliana_10   (Thale cress)   11 11
Carica_papaya_   (Papaya)   4 4
Medicago_truncatula_   (Barrel medic)   7 7
Phaseolus_vulgaris_v186   (French bean)   5 5
Glycine_max_v109   (Soybean)   6 6
Cucumis_sativus_v122   (Cucumber)   7 7
Fragaria_vesca_   (Wild strawberry)   2 2
Malus_domestica_v196   (Apple)   6 5
Prunus_persica_v139   (Peach)   2 2
Linum_usitatissimum_v200   (Flax)   6 6
Manihot_esculenta_v147   (Cassava)   4 4
Populus_trichocarpa_v156   (Black cottonwood)   7 7
Vitis_vinifera_   (Wine grape)   5 5
Mimulus_guttatus_v140   (Spotted monkey flower)   3 3
Solanum_lycopersicum_v.2.3   (Tomato)   12 12
Solanum_tuberosum_   (Potato)   14 14
Actinidia_chinensis_Hongyang_ 3 3
Aquilegia_coerulea_v195 6 6
Triticum_urartu_22 10 10
Triticum_aestivum_22   (Bread wheat)   42 42
Aegilops_tauschii_22 9 9
Brachypodium_distachyon_   (Stiff brome)   10 10
Oryza_barthii_22   (African wild rice)   10 9
Oryza_meridionalis_22 12 12
Oryza_glumaepatula_22 10 10
Oryza_glaberrima   (African rice)   8 8
Oryza_punctata_22 17 13
Oryza_nivara_22 10 10
Oryza_brachyantha_22   (Malo sina)   6 6
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   14 14
Oryza_sativa_v193   (Rice)   14 14
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   12 10
Panicum_virgatum_v202   (Switchgrass)   16 16
Setaria_italica_v164   (Foxtail millet)   10 10
Zea_mays_subsp._mays_   (Maize)   10 10
Zea_mays_v181   (Maize)   12 12
Sorghum_bicolor_   (Sorghum)   17 9
Musa_balbisiana   (Balbis banana)   3 3
Musa_acuminata_22   (Wild Malaysian banana)   3 3
Amborella_trichopoda_22 9 9
Physcomitrella_patens 5 5
Coccomyxa_subellipsoidea_sp._C-169_v2 4 3
Asterochloris_sp._Cgr/DA1pho_v1.0 3 3
Chlorella_variabilis_sp._NC64A_ 3 2
Chlorella_vulgaris_ 4 3
Volvox_carteri_f._nagariensis_ 3 3
Volvox_carteri_v199 3 3
Chlamydomonas_reinhardtii_4.0 2 1
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 1 1
Porphyridium_purpureum_02_2012 1 1
Thecamonas_trahens_ATCC_50062_ 3 3
Bigelowiella_natans_CCMP2755_22 3 3
Cyanophora_paradoxa_ 2 2
Ectocarpus_siliculosus 2 2
Aureococcus_anophagefferens_ 2 2
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 2 2
Pythium_ultimum_v1.7-2 3 3
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_infestans_T30-4_ 1 1
Phytophthora_capsici_ 3 3
Hyaloperonospora_arabidopsidis_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 2 2
Symbiodinium_minutum_clade_B1_v1.2 5 5
Naegleria_gruberi_ 7 5
Trichomonas_vaginalis_ 3 3
Guillardia_theta_CCMP2712_v1.0_ 1 1
Emiliania_huxleyi_CCMP1516_ 7 7
Thermobaculum_terrenum_ATCC_BAA-798 4 3
Microcoleus_sp._PCC_7113 1 1
Cyanothece_sp._PCC_8802 1 1
Gloeocapsa_sp._PCC_7428 1 1
Halothece_sp._PCC_7418 1 1
Rivularia_sp._PCC_7116 3 3
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 1 1
Nostoc_punctiforme_PCC_73102 2 2
Nostoc_sp._PCC_7524 1 1
Conexibacter_woesei_DSM_14684 5 5
Atopobium_parvulum_DSM_20469 1 1
Rubrobacter_xylanophilus_DSM_9941 4 4
Ilumatobacter_coccineus 8 7
Acidimicrobium_ferrooxidans_DSM_10331 2 2
Thermobispora_bispora_DSM_43833 3 3
Nakamurella_multipartita_DSM_44233 5 5
Acidothermus_cellulolyticus_11B 3 2
Modestobacter_marinus 7 7
Blastococcus_saxobsidens_DD2 6 6
Geodermatophilus_obscurus_DSM_43160 4 4
Kineococcus_radiotolerans_SRS30216 1 1
Catenulispora_acidiphila_DSM_44928 4 4
Stackebrandtia_nassauensis_DSM_44728 1 1
Frankia_symbiont_of_Datisca_glomerata 1 1
Frankia_sp._EAN1pec 4 4
Frankia_alni_ACN14a 3 3
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 3 3
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 8 7
Kitasatospora_setae_KM-6054 2 2
Streptomyces_coelicolor_A3(2) 5 5
Streptomyces_sp._PAMC26508 6 5
Streptomyces_flavogriseus_ATCC_33331 6 5
Streptomyces_sp._SirexAA-E 3 3
Streptomyces_griseus_subsp._griseus_NBRC_13350 5 5
Streptomyces_bingchenggensis_BCW-1 5 5
Streptomyces_violaceusniger_Tu_4113 9 9
Streptomyces_avermitilis_MA-4680 6 5
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4 4
Streptomyces_scabiei_87.22 7 6
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 6 6
Actinosynnema_mirum_DSM_43827 5 3
Saccharomonospora_viridis_DSM_43017 4 4
Pseudonocardia_dioxanivorans_CB1190 23 21
Saccharopolyspora_erythraea_NRRL_2338 12 11
Amycolatopsis_mediterranei_U32 11 9
Nocardioides_sp._JS614 12 11
Salinispora_arenicola_CNS-205 1 1
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 2 2
Actinoplanes_sp._N902-109 3 3
Actinoplanes_sp._SE50/110 1 1
Actinoplanes_missouriensis_431 6 5
Segniliparus_rotundus_DSM_44985 1 1
Tsukamurella_paurometabola_DSM_20162 1 1
Gordonia_sp._KTR9 2 2
Gordonia_polyisoprenivorans_VH2 1 1
Gordonia_bronchialis_DSM_43247 2 2
Rhodococcus_jostii_RHA1 6 6
Rhodococcus_equi_103S 3 3
Rhodococcus_opacus_B4 9 9
Rhodococcus_erythropolis_PR4 3 3
Nocardia_farcinica_IFM_10152 1 1
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_massiliense_str._GO_06 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_sp._JLS 3 3
Mycobacterium_vanbaalenii_PYR-1 3 3
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_africanum_GM041182 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_tuberculosis 1 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1
Mycobacterium_rhodesiae_NBB3 4 3
Mycobacterium_ulcerans_Agy99 4 4
Mycobacterium_gilvum_PYR-GCK 2 2
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_marinum_M 5 5
Mycobacterium_smegmatis_str._MC2_155 7 7
Corynebacterium_variabile_DSM_44702 1 1
Beutenbergia_cavernae_DSM_12333 1 1
Microbacterium_testaceum_StLB037 1 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1 1
Intrasporangium_calvum_DSM_43043 3 3
Cellulomonas_flavigena_DSM_20109 1 1
Arthrobacter_phenanthrenivorans_Sphe3 1 1
Arthrobacter_chlorophenolicus_A6 1 1
Arthrobacter_aurescens_TC1 2 2
Arthrobacter_arilaitensis_Re117 1 1
Kocuria_rhizophila_DC2201 1 1
Arthrobacter_sp._Rue61a 3 3
Arthrobacter_sp._FB24 2 2
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 4 4
Anaerolinea_thermophila_UNI-1 6 6
Thermomicrobium_roseum_DSM_5159 10 10
Sphaerobacter_thermophilus_DSM_20745 9 9
Roseiflexus_sp._RS-1 3 3
Roseiflexus_castenholzii_DSM_13941 3 3
Chloroflexus_sp._MS-G 5 4
Chloroflexus_sp._Y-400-fl 5 4
Chloroflexus_aggregans_DSM_9485 3 3
Chloroflexus_aurantiacus_J-10-fl 5 4
Truepera_radiovictrix_DSM_17093 1 1
Deinococcus_gobiensis_I-0 4 4
Deinococcus_geothermalis_DSM_11300 2 2
Deinococcus_proteolyticus_MRP 2 2
Deinococcus_radiodurans_R1 3 3
Meiothermus_silvanus_DSM_9946 3 3
Meiothermus_ruber_DSM_1279 4 4
Anaerococcus_prevotii_DSM_20548 2 2
Finegoldia_magna_ATCC_29328 1 1
Veillonella_parvula_DSM_2008 2 2
Megasphaera_elsdenii_DSM_20460 2 2
Megamonas_hypermegale 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 3 3
Ruminococcus_sp. 2 2
Thermaerobacter_marianensis_DSM_12885 4 4
Sulfobacillus_acidophilus_DSM_10332 7 7
Oscillibacter_valericigenes_Sjm18-20 7 7
butyrate-producing_bacterium_SS3/4 1 1
butyrate-producing_bacterium_SM4/1 1 1
Pelotomaculum_thermopropionicum_SI 4 4
Desulfosporosinus_acidiphilus_SJ4 7 7
Desulfosporosinus_orientis_DSM_765 13 13
Desulfitobacterium_hafniense_Y51 3 3
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Desulfotomaculum_reducens_MI-1 3 3
Desulfotomaculum_acetoxidans_DSM_771 2 2
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Acetobacterium_woodii_DSM_1030 6 6
Eubacterium_eligens_ATCC_27750 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_difficile_630 5 5
Clostridium_saccharolyticum_WM1 7 7
Clostridium_phytofermentans_ISDg 3 3
[Ruminococcus]_obeum 4 4
[Ruminococcus]_torques 4 4
Eubacterium_rectale_M104/1 1 1
Eubacterium_rectale_ATCC_33656 1 1
Coprococcus_sp._ART55/1 1 1
Roseburia_intestinalis 1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 2
Heliobacterium_modesticaldum_Ice1 2 2
Alkaliphilus_oremlandii_OhILAs 4 4
Alkaliphilus_metalliredigens_QYMF 6 6
Clostridium_ljungdahlii_DSM_13528 6 6
Clostridium_beijerinckii_NCIMB_8052 2 2
Clostridium_tetani_E88 1 1
Clostridium_botulinum_A_str._ATCC_3502 4 4
Tepidanaerobacter_acetatoxydans_Re1 2 2
Moorella_thermoacetica_ATCC_39073 4 4
Acetohalobium_arabaticum_DSM_5501 1 1
Halanaerobium_hydrogeniformans 3 3
Tetragenococcus_halophilus_NBRC_12172 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_faecalis_62 1 1
Kyrpidia_tusciae_DSM_2912 3 3
Paenibacillus_sp._JDR-2 1 1
Bacillus_selenitireducens_MLS10 1 1
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 2 2
Geobacillus_sp._GHH01 3 3
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_sp._JS 2 2
Bacillus_sp._1NLA3E 2 2
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_halodurans_C-125 2 2
Bacillus_clausii_KSM-K16 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_megaterium_DSM_319 1 1
Candidatus_Cloacamonas_acidaminovorans 3 3
Gemmatimonas_aurantiaca_T-27 8 4
Melioribacter_roseus_P3M 2 1
Ignavibacterium_album_JCM_16511 2 1
Haliscomenobacter_hydrossis_DSM_1100 14 8
Niastella_koreensis_GR20-10 11 7
Chitinophaga_pinensis_DSM_2588 8 6
Rhodothermus_marinus_DSM_4252 4 3
Belliella_baltica_DSM_15883 6 3
Cyclobacterium_marinum_DSM_745 8 4
Fibrella_aestuarina 11 8
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 8 5
Spirosoma_linguale_DSM_74 11 8
Runella_slithyformis_DSM_19594 13 7
Sphingobacterium_sp._21 8 4
Zunongwangia_profunda_SM-A87 5 3
Gramella_forsetii_KT0803 3 2
Maribacter_sp._HTCC2170 3 2
Robiginitalea_biformata_HTCC2501 10 5
Zobellia_galactanivorans 3 2
Muricauda_ruestringensis_DSM_13258 4 2
Cellulophaga_algicola_DSM_14237 2 1
Cellulophaga_lytica_DSM_7489 4 2
Polaribacter_sp._MED152 4 2
Flavobacterium_johnsoniae_UW101 1 1
Phycisphaera_mikurensis_NBRC_102666 1 1
Isosphaera_pallida_ATCC_43644 1 1
Pirellula_staleyi_DSM_6068 1 1
Methylacidiphilum_infernorum_V4 1 1
Opitutus_terrae_PB90-1 5 3
Fretibacterium_fastidiosum 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 4 4
Anaerobaculum_mobile_DSM_13181 6 6
Turneriella_parva_DSM_21527 1 1
Brachyspira_murdochii_DSM_12563 2 2
Brachyspira_intermedia_PWS/A 2 2
Brachyspira_pilosicoli_95/1000 2 2
Brachyspira_hyodysenteriae_WA1 2 2
Spirochaeta_smaragdinae_DSM_11293 10 10
Sphaerochaeta_pleomorpha_str._Grapes 10 10
Sphaerochaeta_globus_str._Buddy 5 5
Sphaerochaeta_coccoides_DSM_17374 1 1
Spirochaeta_caldaria_DSM_7334 1 1
Treponema_azotonutricium_ZAS-9 1 1
Treponema_primitia_ZAS-2 1 1
Treponema_brennaborense_DSM_12168 1 1
Treponema_paraluiscuniculi_Cuniculi_A 1 1
Treponema_succinifaciens_DSM_2489 1 1
Treponema_pallidum_subsp._pallidum_SS14 2 2
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_africana_DSM_8902 1 1
Spirochaeta_thermophila_DSM_6192 1 1
Denitrovibrio_acetiphilus_DSM_12809 1 1
Marinitoga_piezophila_KA3 3 3
Petrotoga_mobilis_SJ95 3 3
Mesotoga_prima_MesG1.Ag.4.2 3 3
Kosmotoga_olearia_TBF_19.5.1 2 2
Thermosipho_melanesiensis_BI429 2 2
Thermosipho_africanus_TCF52B 2 2
Sulfurihydrogenibium_azorense_Az-Fu1 2 1
Aquifex_aeolicus_VF5 2 1
Hydrogenobacter_thermophilus_TK-6 3 2
Caldisericum_exile_AZM16c01 3 3
Candidatus_Chloracidobacterium_thermophilum_B 2 1
Candidatus_Solibacter_usitatus_Ellin6076 12 8
Granulicella_tundricola_MP5ACTX9 2 2
Granulicella_mallensis_MP5ACTX8 2 2
Candidatus_Koribacter_versatilis_Ellin345 5 3
Terriglobus_saanensis_SP1PR4 4 3
Terriglobus_roseus_DSM_18391 5 5
Acidobacterium_capsulatum_ATCC_51196 1 1
Sebaldella_termitidis_ATCC_33386 3 3
Ilyobacter_polytropus_DSM_2926 5 5
Acidithiobacillus_ferrivorans_SS3 1 1
Acidithiobacillus_caldus_SM-1 1 1
Acidithiobacillus_ferrooxidans_ATCC_53993 2 2
Bacteriovorax_marinus_SJ 1 1
Bdellovibrio_bacteriovorus_HD100 1 1
Sulfurospirillum_deleyianum_DSM_6946 1 1
Arcobacter_nitrofigilis_DSM_7299 2 1
uncultured_Sulfuricurvum_sp._RIFRC-1 2 1
Desulfarculus_baarsii_DSM_2075 1 1
Desulfomonile_tiedjei_DSM_6799 20 18
Syntrophobacter_fumaroxidans_MPOB 5 4
Desulfotalea_psychrophila_LSv54 4 4
Desulfobulbus_propionicus_DSM_2032 3 3
Desulfobacterium_autotrophicum_HRM2 3 3
Desulfohalobium_retbaense_DSM_5692 1 1
Desulfomicrobium_baculatum_DSM_4028 1 1
Desulfovibrio_piezophilus 5 4
Desulfovibrio_aespoeensis_Aspo-2 1 1
Desulfovibrio_magneticus_RS-1 2 2
Desulfovibrio_alaskensis_G20 1 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1 1
Desulfovibrio_salexigens_DSM_2638 1 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1 1
Desulfovibrio_africanus_str._Walvis_Bay 3 3
Geobacter_daltonii_FRC-32 1 1
Geobacter_sp._M21 1 1
Geobacter_uraniireducens_Rf4 1 1
Geobacter_lovleyi_SZ 1 1
Geobacter_sulfurreducens_KN400 2 1
Geobacter_metallireducens_GS-15 5 3
Pelobacter_propionicus_DSM_2379 3 3
Pelobacter_carbinolicus_DSM_2380 1 1
Haliangium_ochraceum_DSM_14365 14 10
Sorangium_cellulosum_'So_ce_56' 5 4
Anaeromyxobacter_dehalogenans_2CP-1 2 1
Stigmatella_aurantiaca_DW4/3-1 10 7
Corallococcus_coralloides_DSM_2259 8 5
Myxococcus_xanthus_DK_1622 6 4
Myxococcus_fulvus_HW-1 5 3
Dechloromonas_aromatica_RCB 2 1
Thauera_sp._MZ1T 2 2
Azoarcus_sp._KH32C 5 3
Azoarcus_sp._BH72 3 2
Aromatoleum_aromaticum_EbN1 2 2
Pseudogulbenkiania_sp._NH8B 3 2
Chromobacterium_violaceum_ATCC_12472 2 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2 1
beta_proteobacterium_CB 3 2
Methylibium_petroleiphilum_PM1 5 3
Thiomonas_arsenitoxydans 1 1
Thiomonas_intermedia_K12 1 1
Rubrivivax_gelatinosus_IL144 4 3
Leptothrix_cholodnii_SP-6 7 4
Burkholderia_phytofirmans_PsJN 17 12
Burkholderia_phymatum_STM815 17 12
Burkholderia_xenovorans_LB400 20 16
Ralstonia_eutropha_JMP134 14 11
Cupriavidus_taiwanensis_LMG_19424 18 13
Cupriavidus_metallidurans_CH34 5 4
Cupriavidus_necator_N-1 21 14
Ralstonia_eutropha_H16 20 15
Ralstonia_pickettii_12D 8 6
Ralstonia_solanacearum_CFBP2957 6 4
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 4 2
Burkholderia_sp._RPE64 14 11
Burkholderia_sp._CCGE1002 12 9
Burkholderia_thailandensis_E264 3 2
Burkholderia_pseudomallei_1106a 3 2
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 15 10
Burkholderia_cenocepacia_HI2424 20 12
Burkholderia_multivorans_ATCC_17616 20 12
Burkholderia_vietnamiensis_G4 8 5
Burkholderia_gladioli_BSR3 7 5
Burkholderia_glumae_BGR1 3 2
Verminephrobacter_eiseniae_EF01-2 2 2
Alicycliphilus_denitrificans_K601 3 3
Ramlibacter_tataouinensis_TTB310 8 7
Delftia_sp._Cs1-4 15 10
Delftia_acidovorans_SPH-1 15 9
Polaromonas_sp._JS666 9 6
Polaromonas_naphthalenivorans_CJ2 2 2
Variovorax_paradoxus_S110 16 11
Rhodoferax_ferrireducens_T118 2 1
Acidovorax_ebreus_TPSY 1 1
Acidovorax_sp._KKS102 11 8
Acidovorax_sp._JS42 1 1
Acidovorax_citrulli_AAC00-1 6 5
Acidovorax_avenae_subsp._avenae_ATCC_19860 6 5
Comamonas_testosteroni_CNB-2 9 7
Herminiimonas_arsenicoxydans 2 1
Collimonas_fungivorans_Ter331 7 5
Janthinobacterium_sp._Marseille 4 3
Herbaspirillum_seropedicae_SmR1 4 3
Pusillimonas_sp._T7-7 3 2
Advenella_kashmirensis_WT001 6 4
Bordetella_petrii_DSM_12804 8 5
Bordetella_avium_197N 7 6
Bordetella_pertussis_Tohama_I 4 3
Bordetella_parapertussis_12822 7 4
Bordetella_bronchiseptica_RB50 9 6
Achromobacter_xylosoxidans_A8 3 2
Achromobacter_xylosoxidans 5 3
Methylotenera_versatilis_301 2 1
Methylotenera_mobilis_JLW8 2 1
Methylovorus_sp._MP688 2 1
Methylovorus_glucosetrophus_SIP3-4 2 1
Methylobacillus_flagellatus_KT 2 1
Parvularcula_bermudensis_HTCC2503 1 1
Asticcacaulis_excentricus_CB_48 3 2
Caulobacter_sp._K31 7 4
Caulobacter_crescentus_NA1000 5 3
Caulobacter_segnis_ATCC_21756 8 5
Phenylobacterium_zucineum_HLK1 3 2
Erythrobacter_litoralis_HTCC2594 4 2
Sphingopyxis_alaskensis_RB2256 2 1
Novosphingobium_sp._PP1Y 8 5
Novosphingobium_aromaticivorans_DSM_12444 6 3
Sphingobium_sp._SYK-6 7 5
Sphingobium_japonicum_UT26S 3 2
Sphingobium_chlorophenolicum_L-1 3 2
Sphingomonas_sp._MM-1 7 4
Sphingomonas_wittichii_RW1 7 5
Hirschia_baltica_ATCC_49814 4 2
Hyphomonas_neptunium_ATCC_15444 5 3
Dinoroseobacter_shibae_DFL_12 11 10
Phaeobacter_gallaeciensis_2.10 6 5
Pseudovibrio_sp._FO-BEG1 7 5
Jannaschia_sp._CCS1 10 8
Ruegeria_sp._TM1040 8 6
Ruegeria_pomeroyi_DSS-3 9 8
Ketogulonicigenium_vulgare_Y25 6 4
Ketogulonigenium_vulgarum_WSH-001 4 2
Roseobacter_litoralis_Och_149 8 7
Roseobacter_denitrificans_OCh_114 8 6
Rhodobacter_sphaeroides_ATCC_17029 5 4
Rhodobacter_capsulatus_SB_1003 1 1
Paracoccus_denitrificans_PD1222 1 1
Tistrella_mobilis_KA081020-065 11 8
Magnetospirillum_magneticum_AMB-1 7 5
Rhodospirillum_centenum_SW 2 2
Rhodospirillum_rubrum_F11 1 1
Azospirillum_lipoferum_4B 8 6
Azospirillum_sp._B510 8 6
Azospirillum_brasilense_Sp245 8 7
Gluconacetobacter_xylinus_NBRC_3288 3 2
Granulibacter_bethesdensis_CGDNIH1 2 1
Gluconacetobacter_diazotrophicus_PAl_5 5 3
Acidiphilium_multivorum_AIU301 11 10
Acidiphilium_cryptum_JF-5 11 10
Gluconobacter_oxydans_621H 3 2
Acetobacter_pasteurianus_IFO_3283-01 7 4
Polymorphum_gilvum_SL003B-26A1 9 8
Candidatus_Puniceispirillum_marinum_IMCC1322 3 3
alpha_proteobacterium_HIMB5 1 1
Starkeya_novella_DSM_506 10 7
Xanthobacter_autotrophicus_Py2 7 5
Azorhizobium_caulinodans_ORS_571 12 8
Methylobacterium_chloromethanicum_CM4 13 10
Methylobacterium_extorquens_AM1 12 8
Methylobacterium_sp._4-46 20 15
Methylobacterium_populi_BJ001 15 11
Methylobacterium_nodulans_ORS_2060 19 14
Methylobacterium_radiotolerans_JCM_2831 18 14
Parvibaculum_lavamentivorans_DS-1 4 3
Ochrobactrum_anthropi_ATCC_49188 1 1
Brucella_microti_CCM_4915 1 1
Brucella_pinnipedialis_B2/94 1 1
Brucella_canis_ATCC_23365 1 1
Brucella_suis_ATCC_23445 1 1
Brucella_melitensis_ATCC_23457 1 1
Brucella_abortus_S19 2 2
Sinorhizobium_fredii_NGR234 10 9
Sinorhizobium_medicae_WSM419 8 7
Sinorhizobium_meliloti_AK83 14 11
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 3 3
Rhizobium_etli_CIAT_652 1 1
Rhizobium_leguminosarum_bv._viciae_3841 5 4
Agrobacterium_tumefaciens_str._C58 2 2
Agrobacterium_radiobacter_K84 7 6
Agrobacterium_sp._H13-3 2 2
Agrobacterium_vitis_S4 4 4
Mesorhizobium_sp._BNC1 9 8
Mesorhizobium_opportunistum_WSM2075 12 11
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 13 12
Mesorhizobium_loti_MAFF303099 10 9
Methylocella_silvestris_BL2 6 4
Beijerinckia_indica_subsp._indica_ATCC_9039 4 2
Pelagibacterium_halotolerans_B2 1 1
Hyphomicrobium_sp._MC1 11 7
Oligotropha_carboxidovorans_OM4 5 4
Rhodopseudomonas_palustris_BisA53 7 6
Nitrobacter_winogradskyi_Nb-255 1 1
Nitrobacter_hamburgensis_X14 5 4
Bradyrhizobium_japonicum_USDA_110 24 18
Bradyrhizobium_sp._ORS_278 26 19
Methylocystis_sp._SC2 2 2
Saccharophagus_degradans_2-40 2 1
Teredinibacter_turnerae_T7901 3 2
Cellvibrio_japonicus_Ueda107 1 1
Oceanimonas_sp._GK1 1 1
Aeromonas_veronii_B565 2 2
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2 2
Vibrio_furnissii_NCTC_11218 1 1
Photobacterium_profundum_SS9 4 4
Psychromonas_ingrahamii_37 2 1
Ferrimonas_balearica_DSM_9799 2 1
Shewanella_loihica_PV-4 2 1
Shewanella_halifaxensis_HAW-EB4 2 2
Shewanella_denitrificans_OS217 3 2
Shewanella_oneidensis_MR-1 2 1
Shewanella_baltica_OS185 3 2
Shewanella_woodyi_ATCC_51908 2 1
Shewanella_sp._MR-4 2 1
Shewanella_amazonensis_SB2B 2 1
Shewanella_violacea_DSS12 3 2
Shewanella_frigidimarina_NCIMB_400 5 3
Shewanella_putrefaciens_CN-32 2 1
Colwellia_psychrerythraea_34H 3 2
Pseudoalteromonas_atlantica_T6c 7 4
Glaciecola_sp._4H-3-7+YE-5 9 5
Glaciecola_nitratireducens_FR1064 4 2
Marinobacter_adhaerens_HP15 4 2
Marinobacter_sp._BSs20148 2 2
Marinobacter_hydrocarbonoclasticus_ATCC_49840 2 1
Marinobacter_aquaeolei_VT8 2 1
Alteromonas_sp._SN2 4 3
Alteromonas_macleodii_str._'Deep_ecotype' 6 4
Hahella_chejuensis_KCTC_2396 5 3
Marinomonas_posidonica_IVIA-Po-181 1 1
Marinomonas_sp._MWYL1 1 1
Marinomonas_mediterranea_MMB-1 1 1
Chromohalobacter_salexigens_DSM_3043 2 2
Halomonas_elongata_DSM_2581 4 3
Methylomicrobium_alcaliphilum 3 2
Methylomonas_methanica_MC09 2 1
Rhodanobacter_denitrificans 2 1
Frateuria_aurantia_DSM_6220 6 3
Pseudoxanthomonas_spadix_BD-a59 2 2
Stenotrophomonas_maltophilia_K279a 1 1
Xanthomonas_axonopodis_pv._citri_str._306 2 2
Xanthomonas_campestris_pv._campestris_str._B100 3 3
Halothiobacillus_neapolitanus_c2 1 1
Alkalilimnicola_ehrlichii_MLHE-1 1 1
Allochromatium_vinosum_DSM_180 2 1
Thiocystis_violascens_DSM_198 2 1
Edwardsiella_ictaluri_93-146 2 2
Edwardsiella_tarda_EIB202 2 2
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 2 2
Serratia_sp._AS12 6 4
Serratia_plymuthica_AS9 6 4
Serratia_proteamaculans_568 8 5
Pantoea_sp._At-9b 5 3
Pantoea_vagans_C9-1 2 2
Pantoea_ananatis_LMG_20103 2 2
Erwinia_billingiae_Eb661 3 2
Escherichia_blattae_DSM_4481 2 1
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Enterobacteriaceae_bacterium_strain_FGI_57 1 1
Shigella_sonnei_Ss046 2 2
Shigella_flexneri_5_str._8401 1 1
Klebsiella_oxytoca_E718 1 1
Enterobacter_aerogenes_KCTC_2190 1 1
Escherichia_fergusonii_ATCC_35469 1 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 3 3
Citrobacter_rodentium_ICC168 2 2
Azotobacter_vinelandii_DJ 7 4
Pseudomonas_sp._TKP 10 6
Pseudomonas_sp._UW4 7 5
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 9 7
Pseudomonas_entomophila_L48 4 3
Pseudomonas_syringae_pv._tomato_str._DC3000 4 4
Pseudomonas_stutzeri_A1501 4 3
Pseudomonas_fulva_12-X 1 1
Pseudomonas_putida_F1 7 5
Pseudomonas_protegens_Pf-5 3 2
Pseudomonas_fluorescens_SBW25 6 4
Pseudomonas_mendocina_ymp 6 4
Pseudomonas_aeruginosa_UCBPP-PA14 9 6
Pseudomonas_sp._VLB120 5 3
Psychrobacter_sp._G 2 2
Psychrobacter_sp._PRwf-1 1 1
Psychrobacter_cryohalolentis_K5 2 2
Acinetobacter_oleivorans_DR1 1 1
Acinetobacter_calcoaceticus_PHEA-2 1 1
Acinetobacter_baumannii_ATCC_17978 2 2
Acinetobacter_sp._ADP1 1 1
Methylophaga_sp._JAM1 2 1
Thiomicrospira_crunogena_XCL-2 2 1
Candidatus_Caldiarchaeum_subterraneum 16 16
Fervidicoccus_fontis_Kam940 1 1
Thermogladius_cellulolyticus_1633 3 3
Aeropyrum_pernix_K1 2 2
Thermosphaera_aggregans_DSM_11486 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_fermentans_DSM_16532 3 3
Desulfurococcus_kamchatkensis_1221n 3 3
Desulfurococcus_mucosus_DSM_2162 3 3
Metallosphaera_cuprina_Ar-4 6 6
Metallosphaera_sedula_DSM_5348 7 7
Acidianus_hospitalis_W1 3 3
Sulfolobus_tokodaii_str._7 10 10
Sulfolobus_islandicus_Y.N.15.51 8 8
Sulfolobus_solfataricus_P2 8 8
Sulfolobus_acidocaldarius_DSM_639 8 8
Vulcanisaeta_moutnovskia_768-28 5 5
Vulcanisaeta_distributa_DSM_14429 3 3
Pyrobaculum_sp._1860 2 2
Pyrobaculum_calidifontis_JCM_11548 1 1
Pyrobaculum_arsenaticum_DSM_13514 2 2
Pyrobaculum_oguniense_TE7 3 3
Thermoproteus_neutrophilus_V24Sta 1 1
Pyrobaculum_aerophilum_str._IM2 2 2
Pyrobaculum_islandicum_DSM_4184 1 1
Thermoproteus_uzoniensis_768-20 1 1
Thermoproteus_tenax_Kra_1 1 1
halophilic_archaeon_DL31 1 1
Picrophilus_torridus_DSM_9790 1 1
Haloterrigena_turkmenica_DSM_5511 2 2
Haloquadratum_walsbyi_DSM_16790 1 1
Haloferax_volcanii_DS2 1 1
Haloarcula_hispanica_ATCC_33960 2 2
Haloarcula_marismortui_ATCC_43049 2 2
Halalkalicoccus_jeotgali_B3 3 3

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   4 4
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   6 6
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   10 10
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   6 5
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3 3
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H143 3 3
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   5 5
Hordeum_vulgare_22   (Domesticated barley)   11 11
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   16 15
Chroococcidiopsis_thermalis_PCC_7203 2 2
Chamaesiphon_minutus_PCC_6605 1 1
Crinalium_epipsammum_PCC_9333 1 1
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._ATCC_51142 1 1
Cyanothece_sp._PCC_8801 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Cylindrospermum_stagnale_PCC_7417 1 1
Frankia_sp._EuI1c 3 3
Frankia_sp._CcI3 1 1
Nocardiopsis_alba_ATCC_BAA-2165 2 2
Streptomyces_albus_J1074 5 5
Streptomyces_rapamycinicus_NRRL_5491 10 10
Streptomyces_davawensis_JCM_4913 5 5
Streptomyces_fulvissimus_DSM_40593 5 5
Streptomyces_venezuelae_ATCC_10712 5 4
Streptomyces_collinus_Tu_365 8 7
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4 4
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 6 6
Saccharothrix_espanaensis_DSM_44229 4 4
Amycolatopsis_mediterranei_RB 11 9
Amycolatopsis_mediterranei_S699 11 9
Amycolatopsis_mediterranei_S699 11 9
Amycolatopsis_orientalis_HCCB10007 7 6
Actinoplanes_friuliensis_DSM_7358 4 4
Rhodococcus_pyridinivorans_SB3094 5 5
Rhodococcus_erythropolis_CCM2595 3 3
Nocardia_brasiliensis_ATCC_700358 3 3
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_liflandii_128FXT 3 3
Mycobacterium_sp._KMS 3 3
Mycobacterium_sp._MCS 3 3
Mycobacterium_canettii_CIPT_140070017 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_canettii_CIPT_140070008 1 1
Mycobacterium_canettii_CIPT_140070010 2 2
Mycobacterium_tuberculosis_EAI5/NITR206 1 1
Mycobacterium_tuberculosis_EAI5 1 1
Mycobacterium_tuberculosis_CAS/NITR204 1 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 1 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_CCDC5180 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_H37Ra 1 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 2 2
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_H37Rv 1 1
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_bovis_AF2122/97 1 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1 1
Mycobacterium_bovis_BCG_str._Mexico 1 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_gilvum_Spyr1 2 2
Mycobacterium_smegmatis_str._MC2_155 7 7
Mycobacterium_kansasii_ATCC_12478 4 4
Corynebacterium_maris_DSM_45190 1 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Clavibacter_michiganensis_subsp._sepedonicus 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1 1
Deinococcus_peraridilitoris_DSM_19664 1 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1 1
Faecalibacterium_prausnitzii_L2-6 1 1
Sulfobacillus_acidophilus_TPY 7 7
Clostridium_acidurici_9a 3 3
Desulfosporosinus_meridiei_DSM_13257 10 10
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 12 12
Clostridium_difficile_BI1 5 5
Clostridium_difficile_R20291 5 5
Clostridium_difficile_CD196 5 5
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Coprococcus_catus_GD/7 4 4
Roseburia_intestinalis_XB6B4 1 1
Clostridium_sp._SY8519 4 4
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_autoethanogenum_DSM_10061 5 5
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 2 2
Clostridium_tetani_genome_12124569 1 1
Clostridium_pasteurianum_BC1 3 3
Clostridium_botulinum_H04402_065 4 4
Clostridium_botulinum_F_str._230613 4 4
Clostridium_botulinum_F_str._Langeland 4 4
Clostridium_botulinum_E3_str._Alaska_E43 4 4
Clostridium_botulinum_B1_str._Okra 4 4
Clostridium_botulinum_Ba4_str._657 3 3
Clostridium_botulinum_A2_str._Kyoto 3 3
Clostridium_botulinum_A3_str._Loch_Maree 4 4
Clostridium_botulinum_A_str._Hall 4 4
Clostridium_botulinum_A_str._ATCC_19397 4 4
Halobacteroides_halobius_DSM_5150 3 3
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Paenibacillus_mucilaginosus_KNP414 1 1
Paenibacillus_mucilaginosus_K02 1 1
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y4.1MC1 2 2
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_cereus_ATCC_14579 1 1
Bacillus_megaterium_QM_B1551 1 1
Rhodothermus_marinus_SG0.5JP17-172 4 3
Echinicola_vietnamensis_DSM_17526 4 2
Emticicia_oligotrophica_DSM_17448 14 7
Singulisphaera_acidiphila_DSM_18658 4 3
Brachyspira_pilosicoli_WesB 2 2
Brachyspira_pilosicoli_B2904 2 2
Brachyspira_pilosicoli_P43/6/78 2 2
Treponema_pedis_str._T_A4 2 2
Treponema_pallidum_str._Fribourg-Blanc 1 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1 1
Spirochaeta_thermophila_DSM_6578 1 1
Hydrogenobacter_thermophilus_TK-6 3 2
Acidithiobacillus_ferrooxidans_ATCC_23270 2 2
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Desulfocapsa_sulfexigens_DSM_10523 2 2
Desulfobacula_toluolica_Tol2 4 4
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2
Desulfovibrio_vulgaris_RCH1 1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1 1
Desulfovibrio_vulgaris_str._Hildenborough 1 1
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 3 3
Desulfovibrio_desulfuricans_ND132 1 1
Geobacter_sulfurreducens_PCA 2 1
Sorangium_cellulosum_So0157-2 8 5
Anaeromyxobacter_sp._K 2 1
Anaeromyxobacter_dehalogenans_2CP-C 2 1
Myxococcus_stipitatus_DSM_14675 5 3
Burkholderia_phenoliruptrix_BR3459a 14 10
Pandoraea_pnomenusa_3kgm 6 4
Ralstonia_pickettii_12J 8 6
Ralstonia_solanacearum_FQY_4 6 4
Ralstonia_solanacearum_Po82 6 4
Ralstonia_solanacearum_PSI07 10 6
Ralstonia_solanacearum_CMR15 6 4
Ralstonia_solanacearum_GMI1000 8 5
Burkholderia_sp._YI23 15 13
Burkholderia_sp._CCGE1003 19 13
Burkholderia_sp._CCGE1001 14 10
Burkholderia_sp._KJ006 8 5
Burkholderia_thailandensis_MSMB121 3 2
Burkholderia_pseudomallei_MSHR305 3 2
Burkholderia_pseudomallei_NCTC_13179 3 2
Burkholderia_pseudomallei_BPC006 3 2
Burkholderia_pseudomallei_1026b 3 2
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 3 2
Burkholderia_pseudomallei_1710b 3 2
Burkholderia_pseudomallei_K96243 3 2
Burkholderia_mallei_NCTC_10229 3 2
Burkholderia_mallei_NCTC_10247 3 2
Burkholderia_mallei_ATCC_23344 3 2
Burkholderia_lata 14 8
Burkholderia_ambifaria_MC40-6 15 10
Burkholderia_cenocepacia_MC0-3 20 12
Burkholderia_cenocepacia_AU_1054 20 12
Burkholderia_cenocepacia_J2315 20 12
Burkholderia_multivorans_ATCC_17616 20 12
Burkholderia_cepacia_GG4 8 5
Alicycliphilus_denitrificans_BC 2 2
Variovorax_paradoxus_B4 12 9
Variovorax_paradoxus_EPS 12 8
Bordetella_pertussis_CS 4 3
Bordetella_parapertussis_18323 4 3
Bordetella_parapertussis_Bpp5 4 2
Bordetella_bronchiseptica_MO149 5 4
Bordetella_bronchiseptica_253 9 6
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 4 2
Sulfuricella_denitrificans_skB26 2 1
Caulobacter_crescentus_CB15 5 3
Phaeobacter_gallaeciensis_DSM_17395 6 5
Phaeobacter_gallaeciensis_DSM_26640 7 6
Leisingera_methylohalidivorans_DSM_14336 6 5
Octadecabacter_antarcticus_307 8 7
Octadecabacter_arcticus_238 6 6
Rhodobacter_sphaeroides_KD131 5 4
Rhodobacter_sphaeroides_ATCC_17025 5 4
Rhodobacter_sphaeroides_2.4.1 5 4
Paracoccus_aminophilus_JCM_7686 3 2
Rhodospirillum_rubrum_ATCC_11170 1 1
Gluconacetobacter_diazotrophicus_PAl_5 5 3
Gluconobacter_oxydans_H24 7 5
Acetobacter_pasteurianus_386B 8 5
Acetobacter_pasteurianus_IFO_3283-12 7 4
Acetobacter_pasteurianus_IFO_3283-01-42C 7 4
Acetobacter_pasteurianus_IFO_3283-32 7 4
Acetobacter_pasteurianus_IFO_3283-26 7 4
Acetobacter_pasteurianus_IFO_3283-22 7 4
Acetobacter_pasteurianus_IFO_3283-07 7 4
Acetobacter_pasteurianus_IFO_3283-03 7 4
Methylobacterium_extorquens_DM4 12 9
Methylobacterium_extorquens_PA1 11 8
Brucella_ceti_TE10759-12 1 1
Brucella_ceti_TE28753-12 1 1
Brucella_canis_HSK_A52141 1 1
Brucella_suis_VBI22 1 1
Brucella_suis_1330 1 1
Brucella_suis_1330 1 1
Brucella_melitensis_NI 1 1
Brucella_melitensis_M5-90 1 1
Brucella_melitensis_M28 1 1
Brucella_melitensis_bv._1_str._16M 1 1
Brucella_abortus_A13334 2 2
Brucella_abortus_bv._1_str._9-941 1 1
Sinorhizobium_fredii_USDA_257 11 9
Sinorhizobium_fredii_HH103 7 6
Sinorhizobium_meliloti_2011 11 9
Sinorhizobium_meliloti_GR4 22 16
Sinorhizobium_meliloti_Rm41 17 14
Sinorhizobium_meliloti_SM11 15 12
Sinorhizobium_meliloti_BL225C 14 11
Sinorhizobium_meliloti_1021 15 12
Rhizobium_etli_CFN_42 1 1
Rhizobium_etli_bv._mimosae_str._Mim1 3 2
Rhizobium_tropici_CIAT_899 11 9
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 4 3
Mesorhizobium_australicum_WSM2073 10 10
Hyphomicrobium_nitrativorans_NL23 2 1
Oligotropha_carboxidovorans_OM5 5 4
Oligotropha_carboxidovorans_OM5 5 4
Rhodopseudomonas_palustris_DX-1 6 6
Rhodopseudomonas_palustris_TIE-1 6 6
Rhodopseudomonas_palustris_HaA2 13 11
Rhodopseudomonas_palustris_BisB5 6 6
Rhodopseudomonas_palustris_BisB18 9 8
Rhodopseudomonas_palustris_CGA009 6 6
Bradyrhizobium_sp._S23321 28 20
Bradyrhizobium_sp._BTAi1 27 20
Bradyrhizobium_oligotrophicum_S58 27 21
Bradyrhizobium_japonicum_USDA_6 29 21
Simiduia_agarivorans_SA1_=_DSM_21679 2 1
Aeromonas_hydrophila_ML09-119 2 2
Vibrio_sp._EJY3 1 1
Vibrio_nigripulchritudo_VibrioScope 1 1
Shewanella_sp._W3-18-1 2 1
Shewanella_sp._ANA-3 2 1
Shewanella_baltica_BA175 3 2
Shewanella_baltica_OS678 3 2
Shewanella_baltica_OS117 3 2
Shewanella_baltica_OS223 3 2
Shewanella_baltica_OS195 3 2
Shewanella_baltica_OS155 3 2
Shewanella_sp._MR-7 2 1
Shewanella_putrefaciens_200 2 1
Glaciecola_psychrophila_170 9 5
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 8 5
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 8 5
Alteromonas_macleodii_str._'Ionian_Sea_U8' 8 5
Alteromonas_macleodii_str._'Ionian_Sea_U7' 8 5
Alteromonas_macleodii_str._'Ionian_Sea_U4' 8 5
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 8 5
Alteromonas_macleodii_str._'English_Channel_615' 6 4
Alteromonas_macleodii_AltDE1 8 5
Alteromonas_macleodii_str._'English_Channel_673' 6 4
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 8 5
Alteromonas_macleodii_str._'Black_Sea_11' 4 3
Alteromonas_macleodii_ATCC_27126 8 5
Alcanivorax_dieselolei_B5 6 4
Thalassolituus_oleivorans_MIL-1 1 1
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 1 1
Stenotrophomonas_maltophilia_R551-3 1 1
Xanthomonas_citri_subsp._citri_Aw12879 2 2
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2 2
Xanthomonas_axonopodis_pv._citrumelo_F1 2 2
Xanthomonas_axonopodis_Xac29-1 2 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 1 1
Xanthomonas_campestris_pv._raphani_756C 3 3
Xanthomonas_campestris_pv._campestris_str._8004 3 3
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 3 3
Thioalkalivibrio_nitratireducens_DSM_14787 1 1
Morganella_morganii_subsp._morganii_KT 2 2
Edwardsiella_tarda_C07-087 2 2
Edwardsiella_tarda_FL6-60 2 2
Rahnella_aquatilis_HX2 1 1
Serratia_sp._AS13 6 4
Serratia_plymuthica_S13 4 3
Serratia_plymuthica_4Rx13 6 4
Serratia_marcescens_FGI94 5 3
Serratia_marcescens_WW4 7 4
Serratia_liquefaciens_ATCC_27592 8 5
Pantoea_ananatis_LMG_5342 2 2
Pantoea_ananatis_PA13 2 2
Pantoea_ananatis_AJ13355 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Raoultella_ornithinolytica_B6 1 1
Shigella_sonnei_53G 2 2
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 1 1
Shigella_boydii_Sb227 1 1
Klebsiella_oxytoca_KCTC_1686 1 1
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_E24377A 3 3
Escherichia_coli_E._coli_PMV-1 2 2
Escherichia_coli_JJ1886 2 2
Escherichia_coli_LY180 3 3
Escherichia_coli_APEC_O78 3 3
Escherichia_coli_O7:K1_str._CE10 2 2
Escherichia_coli_O104:H4_str._2009EL-2050 3 3
Escherichia_coli_O104:H4_str._2009EL-2071 3 3
Escherichia_coli_O104:H4_str._2011C-3493 3 3
Escherichia_coli_NA114 2 2
Escherichia_coli_P12b 2 2
Escherichia_coli_str._'clone_D_i2' 2 2
Escherichia_coli_str._'clone_D_i14' 2 2
Escherichia_coli_UM146 2 2
Escherichia_coli_042 2 2
Escherichia_coli_Xuzhou21 3 3
Escherichia_coli_IHE3034 2 2
Escherichia_coli_UMNK88 3 3
Escherichia_coli_O83:H1_str._NRG_857C 2 2
Escherichia_coli_ABU_83972 2 2
Escherichia_coli_KO11FL 3 3
Escherichia_coli_KO11FL 3 3
Escherichia_coli_LF82 2 2
Escherichia_coli_ED1a 2 2
Escherichia_coli_IAI39 2 2
Escherichia_coli_UMN026 3 3
Escherichia_coli_55989 3 3
Escherichia_coli_S88 2 2
Escherichia_coli_IAI1 3 3
Escherichia_coli_W 3 3
Escherichia_coli_W 3 3
Escherichia_coli_DH1 3 3
Escherichia_coli_DH1 3 3
Escherichia_coli_ATCC_8739 3 3
Escherichia_coli_BL21(DE3) 3 3
Escherichia_coli_BL21(DE3) 3 3
Escherichia_coli_SMS-3-5 2 2
Escherichia_coli_SE15 2 2
Escherichia_coli_SE11 3 3
Escherichia_coli_APEC_O1 2 2
Escherichia_coli_O103:H2_str._12009 3 3
Escherichia_coli_UTI89 2 2
Escherichia_coli_536 2 2
Escherichia_coli_HS 2 2
Escherichia_coli_ETEC_H10407 3 3
Escherichia_coli_O55:H7_str._RM12579 3 3
Escherichia_coli_O55:H7_str._CB9615 3 3
Escherichia_coli_O26:H11_str._11368 3 3
Escherichia_coli_CFT073 2 2
Escherichia_coli_O111:H-_str._11128 2 2
Escherichia_coli_O127:H6_str._E2348/69 1 1
Escherichia_coli_O157:H7_str._TW14359 3 3
Escherichia_coli_O157:H7_str._EC4115 3 3
Escherichia_coli_O157:H7_str._Sakai 3 3
Escherichia_coli_O157:H7_str._EDL933 3 3
Escherichia_coli_str._K-12_substr._MDS42 2 2
Escherichia_coli_BW2952 2 2
Escherichia_coli_str._K-12_substr._MG1655 3 3
Escherichia_coli_str._K-12_substr._W3110 3 3
Escherichia_coli_str._K-12_substr._DH10B 3 3
Escherichia_coli_B_str._REL606 3 3
Enterobacter_cloacae_SCF1 3 3
Azotobacter_vinelandii_CA6 7 4
Azotobacter_vinelandii_CA 7 4
Pseudomonas_denitrificans_ATCC_13867 5 4
Pseudomonas_syringae_pv._phaseolicola_1448A 2 2
Pseudomonas_syringae_pv._syringae_B728a 3 3
Pseudomonas_stutzeri_CCUG_29243 3 3
Pseudomonas_stutzeri_DSM_10701 4 3
Pseudomonas_stutzeri_DSM_4166 4 3
Pseudomonas_stutzeri_RCH2 2 2
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 4 3
Pseudomonas_monteilii_SB3101 6 5
Pseudomonas_monteilii_SB3078 6 5
Pseudomonas_putida_H8234 9 7
Pseudomonas_putida_HB3267 4 3
Pseudomonas_putida_NBRC_14164 7 5
Pseudomonas_putida_DOT-T1E 9 7
Pseudomonas_putida_S16 5 4
Pseudomonas_putida_BIRD-1 7 5
Pseudomonas_putida_W619 7 5
Pseudomonas_putida_ND6 7 5
Pseudomonas_putida_KT2440 8 5
Pseudomonas_putida_GB-1 6 4
Pseudomonas_protegens_CHA0 3 2
Pseudomonas_poae_RE*1-1-14 4 3
Pseudomonas_fluorescens_F113 7 5
Pseudomonas_fluorescens_A506 5 4
Pseudomonas_fluorescens_R124 11 7
Pseudomonas_fluorescens_Pf0-1 13 8
Pseudomonas_resinovorans_NBRC_106553 6 4
Pseudomonas_mendocina_NK-01 3 2
Pseudomonas_aeruginosa_SCV20265 9 6
Pseudomonas_aeruginosa_MTB-1 9 6
Pseudomonas_aeruginosa_LES431 9 6
Pseudomonas_aeruginosa_RP73 9 6
Pseudomonas_aeruginosa_B136-33 9 6
Pseudomonas_aeruginosa_PA1R 9 6
Pseudomonas_aeruginosa_PA1 9 6
Pseudomonas_aeruginosa_DK2 7 4
Pseudomonas_aeruginosa_NCGM2.S1 9 6
Pseudomonas_aeruginosa_M18 9 6
Pseudomonas_aeruginosa_LESB58 9 6
Pseudomonas_aeruginosa_PA7 9 6
Pseudomonas_aeruginosa_PAO1 9 6
Acinetobacter_genomosp._13TU__RUH2624 1 1
Acinetobacter_sp.__SH024 1 1
Acinetobacter_calcoaceticus_ruh2202 1 1
Acinetobacter_baumannii_ZW85-1 1 1
Acinetobacter_baumannii_TYTH-1 1 1
Acinetobacter_baumannii_BJAB0868 1 1
Acinetobacter_baumannii_BJAB0715 1 1
Acinetobacter_baumannii_BJAB07104 1 1
Acinetobacter_baumannii_TCDC-AB0715 1 1
Acinetobacter_baumannii_D1279779 1 1
Acinetobacter_baumannii_MDR-TJ 1 1
Acinetobacter_baumannii_1656-2 1 1
Acinetobacter_baumannii__ATCC_19606 1 1
Acinetobacter_baumannii_AB307-0294 1 1
Acinetobacter_baumannii_AYE 1 1
Acinetobacter_baumannii_SDF 1 1
Acinetobacter_baumannii_MDR-ZJ06 1 1
Acinetobacter_baumannii_AB0057 1 1
Acinetobacter_baumannii_ACICU 1 1
Aeropyrum_camini_SY1_=_JCM_12091 3 3
Sulfolobus_islandicus_LAL14/1 7 7
Sulfolobus_islandicus_REY15A 7 7
Sulfolobus_islandicus_HVE10/4 8 8
Sulfolobus_islandicus_Y.G.57.14 9 9
Sulfolobus_islandicus_L.S.2.15 8 8
Sulfolobus_islandicus_M.16.27 8 8
Sulfolobus_islandicus_M.14.25 8 8
Sulfolobus_islandicus_M.16.4 8 8
Sulfolobus_islandicus_L.D.8.5 7 7
Sulfolobus_solfataricus_98/2 8 8
Sulfolobus_acidocaldarius_SUSAZ 10 10
Sulfolobus_acidocaldarius_Ron12/I 9 9
Sulfolobus_acidocaldarius_N8 8 8
Ferroplasma_acidarmanus_fer1 2 2
Natronococcus_occultus_SP4 1 1
Haloquadratum_walsbyi_C23 2 2
Natronomonas_moolapensis_8.8.11 1 1
Haloarcula_hispanica_N601 2 2

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   2 2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   2 2
Gorilla_gorilla_69_3.1   (Western gorilla)   2 2
Pongo_abelii_69_2   (Sumatran orangutan)   2 2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1 1
Macaca_mulatta_69_1   (Rhesus monkey)   4 4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   3 3
Otolemur_garnettii_69_3   (Small-eared galago)   4 4
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   5 5
Mus_musculus_69_38   (House mouse)   5 5
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   4 4
Cavia_porcellus_69_3   (Domestic guinea pig)   3 3
Oryctolagus_cuniculus_69_2   (Rabbit)   4 4
Ochotona_princeps_69   (American pika)   2 2
Tupaia_belangeri_69   (Northern tree shrew)   3 2
Sus_scrofa_69_10.2   (Pig)   3 3
Bos_taurus_69_3.1   (Cattle)   4 4
Vicugna_pacos_69_1   (Alpaca)   3 2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   4 2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   4 4
Ailuropoda_melanoleuca_69_1   (Giant panda)   4 4
Canis_familiaris_69_3.1   (Dog)   4 4
Felis_catus_69   (Domestic cat)   2 2
Equus_caballus_69_2   (Horse)   9 8
Myotis_lucifugus_69_2.0   (Little brown bat)   4 4
Pteropus_vampyrus_69_1   (Large flying fox)   2 2
Sorex_araneus_69_1   (European shrew)   4 2
Erinaceus_europaeus_69   (Western European hedgehog)   2 2
Procavia_capensis_69_1   (Cape rock hyrax)   2 2
Loxodonta_africana_69_3   (African savanna elephant)   4 4
Echinops_telfairi_69   (Small Madagascar hedgehog)   3 2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   4 2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   3 2
Macropus_eugenii_69_1.0   (Tammar wallaby)   2 2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5 5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   5 5
Ornithorhynchus_anatinus_69_5   (Platypus)   16 16
Petromyzon_marinus_69_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_69_2   (Turkey)   2 2
Gallus_gallus_69_2   (Chicken)   3 3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2 2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   3 3
Anolis_carolinensis_69_2.0   (Green anole)   3 3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   2 2
Latimeria_chalumnae_69_1   (Coelacanth)   2 2
Gadus_morhua_69_1   (Atlantic cod)   3 2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   3 3
Takifugu_rubripes_69_4   (Torafugu)   2 2
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2 2
Oryzias_latipes_69_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2 2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2 2
Danio_rerio_69_9   (Zebrafish)   3 3
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4 4
Ciona_intestinalis_69   (Vase tunicate)   4 4
Drosophila_melanogaster_69_5   (Fruit fly)   5 5
Caenorhabditis_elegans_69_215   (Roundworm)   3 3
Arabidopsis_thaliana_10   (Thale cress)   9 9

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4 4
Homo_sapiens__(NCBI_version)   (Human)   2 2
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   5 5
Heliconius_numata__(Incomplete) 7 7
Lotus_japonicus__(Early_assembly) 8 8
Malus_x_domestica_(Duplicate)   (Apple)   6 5
Ricinus_communis__(Early_assembly)   (Castor bean)   9 9
Nicotiana_benthamiana_0.4.4_(Early_draft) 9 9
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   10 10
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   12 12
Phoenix_dactylifera__(Early_draft)   (Date palm)   4 4
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1
NCBI_plasmid_sequences_(Plasmids) 284 215
Uniprot_2018_03_genome 57064 47385
PDB_chains_(SCOP_1.75)_(PDB) 11 11
NCBI_2017_08_genome 141314 114703
Protozoadb_2010_08_(Protozoadb) 6 6
TargetDB__(Targets) 125 109
Protein_Data_Bank_(all_PDB_sequenc) 141 141
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 759 759
STRING_v9.0.5_(STRING) 2230 1833

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