SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for ADP-ribosylation superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a ADP-ribosylation domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   81 81
Pan_troglodytes_76_2.1.4   (Chimpanzee)   22 22
Gorilla_gorilla_76_3.1   (Western gorilla)   35 35
Pongo_abelii_76_2   (Sumatran orangutan)   21 21
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   25 25
Papio_anubis_76   (Olive baboon)   24 24
Macaca_mulatta_76_1   (Rhesus monkey)   31 31
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   51 51
Otolemur_garnettii_76_3   (Small-eared galago)   25 25
Microcebus_murinus_76_1   (Gray mouse lemur)   21 19
Rattus_norvegicus_76_5.0   (Norway rat)   24 24
Mus_musculus_76_38   (House mouse)   52 52
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   18 17
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   23 23
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   22 22
Cavia_porcellus_76_3   (Domestic guinea pig)   26 26
Oryctolagus_cuniculus_76_2   (Rabbit)   33 33
Ochotona_princeps_76   (American pika)   24 22
Tupaia_belangeri_76   (Northern tree shrew)   18 18
Sus_scrofa_76_10.2   (Pig)   32 32
Bos_taurus_76_3.1   (Cattle)   30 30
Ovis_aries_76_3.1   (Sheep)   31 31
Vicugna_pacos_76_1   (Alpaca)   15 14
Tursiops_truncatus_76_1   (Bottlenose dolphin)   21 21
Mustela_putorius_furo_76_1.0   (Domestic ferret)   23 23
Ailuropoda_melanoleuca_76_1   (Giant panda)   23 23
Canis_familiaris_76_3.1   (Dog)   34 34
Felis_catus_76_6.2   (Domestic cat)   22 22
Equus_caballus_76_2   (Horse)   26 26
Myotis_lucifugus_76_2.0   (Little brown bat)   33 33
Pteropus_vampyrus_76_1   (Large flying fox)   24 24
Sorex_araneus_76_1   (European shrew)   17 17
Erinaceus_europaeus_76   (Western European hedgehog)   19 19
Procavia_capensis_76_1   (Cape rock hyrax)   23 21
Loxodonta_africana_76_3   (African savanna elephant)   32 32
Echinops_telfairi_76   (Small Madagascar hedgehog)   17 17
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   25 25
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   16 15
Macropus_eugenii_76_1.0   (Tammar wallaby)   21 19
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   27 27
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   27 26
Ornithorhynchus_anatinus_76_5   (Platypus)   27 27
Saccoglossus_kowalevskii_v3.0 36 36
Petromyzon_marinus_76_7.0   (Sea lamprey)   23 21
Meleagris_gallopavo_76_2   (Turkey)   27 27
Gallus_gallus_76_4   (Chicken)   25 25
Anas_platyrhynchos_76_1.0   (Mallard)   21 21
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   17 17
Ficedula_albicollis_76_1.0   (Collared flycatcher)   23 23
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   33 33
Anolis_carolinensis_76_2.0   (Green anole)   30 30
Xenopus_laevis_   (African clawed frog)   36 36
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   43 41
Latimeria_chalumnae_76_1   (Coelacanth)   43 41
Lepisosteus_oculatus_76   (Spotted gar)   47 45
Gadus_morhua_76_1   (Atlantic cod)   60 60
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   28 28
Takifugu_rubripes_76_4   (Torafugu)   49 49
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   32 32
Oryzias_latipes_76_1   (Japanese medaka)   30 30
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   39 39
Poecilia_formosa_76   (Amazon molly)   40 39
Oreochromis_niloticus_76_1.0   (Nile tilapia)   46 44
Astyanax_mexicanus_76   (Mexican tetra)   48 44
Danio_rerio_76_9   (Zebrafish)   58 55
Oikopleura_dioica 7 6
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   24 24
Ciona_intestinalis_76   (Vase tunicate)   17 17
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   14 14
Adineta_vaga 685 678
Octopus_bimaculoides_280 21 20
Crassostrea_gigas_22   (Pacific oyster)   55 51
Lottia_gigantea_   (Owl limpet)   20 20
Helobdella_robusta_ 19 18
Capitella_sp._I_ 32 32
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2 2
Heliconius_melpomene_   (Postman butterfly)   2 2
Bombyx_mori_   (Domestic silkworm)   3 3
Nasonia_vitripennis_   (Jewel wasp)   4 4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   7 7
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   4 4
Linepithema_humile_v1.1   (Argentine ant)   4 4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4 4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4 4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   4 4
Atta_cephalotes_v1.1 4 4
Camponotus_floridanus_v3.3   (Florida carpenter ant)   4 4
Lucilia_cuprina   (Australian sheep blowfly)   2 2
Drosophila_grimshawi_1.3 3 3
Drosophila_willistoni_1.3 2 2
Drosophila_pseudoobscura_2.13 3 3
Drosophila_persimilis_1.3 2 2
Drosophila_suzukii 3 2
Drosophila_yakuba_1.3 3 3
Drosophila_simulans_1.3 2 2
Drosophila_sechellia_1.3 2 2
Drosophila_melanogaster_76_5   (Fruit fly)   5 5
Drosophila_erecta_1.3 2 2
Drosophila_ananassae_1.3 2 2
Drosophila_virilis_1.2 3 3
Drosophila_mojavensis_1.3 3 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   5 5
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3 3
Anopheles_darlingi_22   (American malaria mosquito)   2 2
Anopheles_gambiae_49_3j   (African malaria mosquito)   3 3
Tribolium_castaneum_3.0   (Red flour beetle)   12 11
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   3 3
Acyrthosiphon_pisum_   (Pea aphid)   5 5
Rhodnius_prolixus_22 2 2
Daphnia_pulex_   (Common water flea)   14 14
Strigamia_maritima_22 6 6
Sarcoptes_scabiei 3 3
Tetranychus_urticae_   (Two-spotted spider mite)   2 2
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   6 6
Pristionchus_pacificus_ 14 13
Meloidogyne_incognita_   (Southern root-knot nematode)   3 3
Onchocerca_volvulus_22 3 3
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   4 4
Caenorhabditis_japonica_ 2 2
Caenorhabditis_brenneri_ 7 7
Caenorhabditis_remanei_ 8 8
Caenorhabditis_elegans_76_235   (Roundworm)   4 4
Caenorhabditis_briggsae_2 3 3
Trichinella_spiralis_22 2 2
Hymenolepis_microstoma_ 7 6
Echinococcus_multilocularis_ 4 4
Echinococcus_granulosus_ 3 3
Taenia_solium_   (Pork tapeworm)   5 5
Schistosoma_mansoni_ 7 6
Mnemiopsis_leidyi   (Sea walnut)   13 13
Acropora_digitifera_v1.0 48 45
Nematostella_vectensis_1.0   (Starlet sea anemone)   15 15
Hydra_vulgaris 11 11
Amphimedon_queenslandica 51 51
Trichoplax_adhaerens_ 27 27
Proterospongia_sp._ATCC_50818_ 53 53
Monosiga_brevicollis_ 51 49
Sphaeroforma_arctica_JP610_ 10 10
Capsaspora_owczarzaki_ATCC_30864_ 14 14
Conidiobolus_coronatus_NRRL28638_v1.0 5 5
Mortierella_verticillata_NRRL_6337_ 6 6
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 1 1
Mucor_circinelloides_ 2 2
Rhizomucor_miehei_CAU432_ 1 1
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 2 2
Ustilago_maydis_ 2 2
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 3 3
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 4 4
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 6 6
Piloderma_croceum_F_1598_v1.0 15 15
Serpula_lacrymans_var._lacrymans_S7.9_ 20 19
Coniophora_puteana 13 13
Hydnomerulius_pinastri_v2.0 8 8
Paxillus_rubicundulus_Ve08.2h10_v1.0 6 6
Pisolithus_microcarpus_441_v1.0 5 5
Pisolithus_tinctorius_Marx_270_v1.0 6 6
Scleroderma_citrinum_Foug_A_v1.0 7 7
Coprinopsis_cinerea_okayama7_130_v3 12 12
Pleurotus_ostreatus_   (Oyster mushroom)   8 8
Amanita_thiersii_Skay4041_v1.0 8 8
Amanita_muscaria_Koide_v1.0   (Fly agaric)   6 6
Galerina_marginata_v1.0 12 12
Hebeloma_cylindrosporum_h7_v2.0 20 20
Laccaria_bicolor_S238N-H82_ 12 12
Agaricus_bisporus_var._bisporus_ 5 5
Schizophyllum_commune_ 12 12
Stereum_hirsutum_FP-91666_SS1__v1.0 19 19
Heterobasidion_annosum_ 3 3
Gloeophyllum_trabeumv1.0 8 8
Punctularia_strigosozonata_v1.0 4 4
Sebacina_vermifera_MAFF_305830_v1.0 26 26
Fomitiporia_mediterranea_v1.0 4 4
Tulasnella_calospora_AL13/4D_v1.0 66 65
Postia_placenta_ 19 19
Wolfiporia_cocos_MD-104_SS10__v1.0 10 10
Fomitopsis_pinicolav1.0 13 13
Fomitopsis_pinicola_FP-58527_SS1_v3.0 13 12
Phanerochaete_chrysosporium_RP-78_2.1 8 8
Dichomitus_squalens 4 4
Trametes_versicolor_v1.0 5 5
Tremella_mesenterica_   (Witches' butter)   4 3
Daldinia_eschscholzii_EC12_v1.0 6 6
Apiospora_montagnei_NRRL_25634_v1.0 9 9
Magnaporthe_poae_ATCC_64411_22 7 7
Magnaporthe_grisea_70-15_ 22 22
Podospora_anserina_ 3 3
Sporotrichum_thermophile_ATCC_42464_ 5 5
Thielavia_terrestris_NRRL_8126_ 5 5
Chaetomium_globosum_CBS_148.51_ 5 5
Neurospora_tetrasperma_ 4 4
Neurospora_discreta_FGSC_8579_ 3 3
Neurospora_crassa_OR74A_ 4 4
Cryphonectria_parasitica_   (Chestnut blight fungus)   6 6
Verticillium_albo-atrum_VaMs.102_ 4 4
Verticillium_dahliae_VdLs.17_ 5 5
Acremonium_alcalophilumv_1.0 4 4
Glomerella_graminicola_22 5 5
Fusarium_graminearum_ 5 5
Nectria_haematococca_mpVI_ 7 7
Fusarium_oxysporum_f._sp._lycopersici_4286_ 7 7
Fusarium_verticillioides_7600_ 4 4
Trichoderma_asperellum_CBS_433.97_v1.0 4 4
Trichoderma_atroviride_ 4 4
Trichoderma_citrinoviride_v1.0 4 4
Trichoderma_reesei_1.2 5 5
Trichoderma_virens_Gv29-8_ 5 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 6 6
Trichoderma_harzianum_CBS_226.95_v1.0 5 5
Amorphotheca_resinae_v1.0   (Creosote fungus)   6 6
Botrytis_cinerea_B05.10_ 4 4
Sclerotinia_sclerotiorum_ 4 4
Blumeria_graminis_22 3 3
Didymella_exigua_CBS_183.55_v1.0 5 5
Leptosphaeria_maculans_22 5 5
Setosphaeria_turcica_v1.0 5 5
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4 4
Cochliobolus_victoriae_FI3_v1.0 5 5
Cochliobolus_carbonum_26-R-13_v1.0 4 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   4 4
Alternaria_brassicicola_ 4 4
Cochliobolus_lunatus_m118_v2.0 5 5
Pyrenophora_teres_f._teres_22 4 4
Pyrenophora_tritici-repentis_ 4 4
Stagonospora_nodorum_ 5 5
Mycosphaerella_graminicola_IPO323_ 3 3
Zasmidium_cellare_ATCC_36951_v1.0 6 6
Dothistroma_septosporum 6 6
Septoria_musiva_v1.0 4 4
Mycosphaerella_fijiensis_CIRAD86_ 4 4
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3 3
Paracoccidioides_brasiliensis_Pb18_ 3 3
Coccidioides_posadasii_RMSCC_3488_ 3 3
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 3 3
Trichophyton_equinum_CBS_127.97_ 3 3
Trichophyton_verrucosum_HKI_0517_ 3 3
Arthroderma_benhamiae_CBS_112371_ 3 3
Trichophyton_tonsurans_CBS_112818_ 3 3
Trichophyton_rubrum_CBS_118892_ 3 3
Uncinocarpus_reesii_1704_ 3 3
Aspergillus_zonatus_v1.0 5 5
Penicillium_chrysogenum_Wisconsin_54-1255_ 6 6
Penicillium_chrysogenum_v1.0 5 5
Aspergillus_acidus_v1.0 4 4
Aspergillus_fumigatus_Af293 4 4
Aspergillus_brasiliensis_v1.0 4 4
Aspergillus_nidulans_FGSC_A4_ 4 4
Aspergillus_sydowii_v1.0 5 5
Aspergillus_versicolor_v1.0 5 5
Aspergillus_glaucus 4 4
Aspergillus_carbonarius_ITEM_5010_ 3 3
Neosartorya_fischeri_NRRL_181_ 4 4
Aspergillus_terreus_NIH2624_ 4 4
Aspergillus_tubingensis_v1.0 4 4
Aspergillus_wentii_v1.0 4 4
Aspergillus_oryzae_RIB40_ 3 3
Aspergillus_niger_22 4 4
Aspergillus_niger_ATCC_1015_ 4 4
Aspergillus_flavus_NRRL3357_ 4 4
Aspergillus_clavatus_NRRL_1_ 4 4
Penicillium_marneffei_ATCC_18224_ 4 4
Tuber_melanosporum_Mel28_22 4 4
Tuber_melanosporum_Vittad_   (Perigord truffle)   4 4
Hansenula_polymorpha_v2.0 1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Debaromyces_hansenii 1 1
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 1 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 3 3
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 1 1
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 7 7
Allomyces_macrogynus_ATCC_38327_ 3 3
Spizellomyces_punctatus_DAOM_BR117_ 6 6
Dictyostelium_discoideum 20 20
Dictyostelium_purpureum_ 24 24
Entamoeba_dispar_1.2 8 8
Entamoeba_invadens_1.2 15 15
Entamoeba_histolytica_1 9 9
Selaginella_moellendorffii_ 41 41
Pinus_taeda   (Loblolly pine)   24 23
Picea_abies   (Norway spruce)   14 14
Eucalyptus_grandis_v201   (Rose gum)   21 21
Theobroma_cacao_B97-61/B2_v1   (Cacao)   19 19
Gossypium_raimondii_v221 68 68
Citrus_clementina_v165 25 25
Citrus_sinensis_v154   (Sweet orange)   17 17
Thellungiella_halophila_v173 21 21
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   30 29
Capsella_rubella_v183 20 20
Arabidopsis_lyrata_   (Lyrate rockcress)   25 25
Arabidopsis_thaliana_10   (Thale cress)   24 24
Carica_papaya_   (Papaya)   13 13
Medicago_truncatula_   (Barrel medic)   40 40
Phaseolus_vulgaris_v186   (French bean)   22 22
Glycine_max_v109   (Soybean)   40 39
Cucumis_sativus_v122   (Cucumber)   25 25
Fragaria_vesca_   (Wild strawberry)   20 20
Malus_domestica_v196   (Apple)   38 37
Prunus_persica_v139   (Peach)   17 17
Linum_usitatissimum_v200   (Flax)   28 28
Manihot_esculenta_v147   (Cassava)   27 27
Populus_trichocarpa_v156   (Black cottonwood)   34 34
Vitis_vinifera_   (Wine grape)   17 17
Mimulus_guttatus_v140   (Spotted monkey flower)   23 23
Solanum_lycopersicum_v.2.3   (Tomato)   24 24
Solanum_tuberosum_   (Potato)   28 28
Actinidia_chinensis_Hongyang_ 27 26
Aquilegia_coerulea_v195 28 27
Triticum_urartu_22 17 16
Triticum_aestivum_22   (Bread wheat)   46 46
Aegilops_tauschii_22 18 18
Brachypodium_distachyon_   (Stiff brome)   30 30
Oryza_barthii_22   (African wild rice)   26 25
Oryza_meridionalis_22 18 18
Oryza_glumaepatula_22 29 29
Oryza_glaberrima   (African rice)   17 17
Oryza_punctata_22 25 25
Oryza_nivara_22 29 29
Oryza_brachyantha_22   (Malo sina)   15 15
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   32 32
Oryza_sativa_v193   (Rice)   32 32
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   24 24
Panicum_virgatum_v202   (Switchgrass)   39 39
Setaria_italica_v164   (Foxtail millet)   20 20
Zea_mays_subsp._mays_   (Maize)   32 32
Zea_mays_v181   (Maize)   39 39
Sorghum_bicolor_   (Sorghum)   22 20
Musa_balbisiana   (Balbis banana)   38 37
Musa_acuminata_22   (Wild Malaysian banana)   39 39
Amborella_trichopoda_22 14 14
Physcomitrella_patens 14 13
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 3 3
Volvox_carteri_f._nagariensis_ 3 3
Volvox_carteri_v199 3 3
Chlamydomonas_reinhardtii_4.0 4 4
Ostreococcus_sp._RCC809_ 1 1
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 3 3
Micromonas_pusilla_CCMP1545_v3.0 3 3
Porphyridium_purpureum_02_2012 3 3
Thecamonas_trahens_ATCC_50062_ 20 20
Bigelowiella_natans_CCMP2755_22 25 25
Giardia_lamblia_2.3 1 1
Cyanophora_paradoxa_ 13 13
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_vivax_ 3 3
Trypanosoma_cruzi_strain_CL_Brener 3 3
Trypanosoma_congolense_2.4 3 3
Trypanosoma_brucei_gambiense_v4.1 3 3
Trypanosoma_brucei_TREU927_v4.1 3 3
Ectocarpus_siliculosus 28 28
Aureococcus_anophagefferens_ 8 8
Albugo_laibachii_22 6 6
Pythium_iwayamai_DAOM_BR242034_22 9 9
Pythium_arrhenomanes_ATCC_12531_22 7 7
Pythium_ultimum_v1.7-2 9 9
Pythium_aphanidermatum_DAOM_BR444_22 7 7
Pythium_irregulare_DAOM_BR486_22 8 8
Pythium_vexans_DAOM_BR484_22 9 9
Phytophthora_ramorum_1.1   (Sudden oak death agent)   9 9
Phytophthora_sojae_1.1 5 4
Phytophthora_infestans_T30-4_ 4 3
Phytophthora_capsici_ 5 5
Hyaloperonospora_arabidopsidis_22 2 2
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 10 10
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 10 10
Paramecium_tetraurelia_ 35 35
Tetrahymena_thermophila_SB210_1_ 42 41
Ichthyophthirius_multifiliis_strain_G5_ 4 4
Cryptosporidium_hominis 2 2
Cryptosporidium_muris 2 2
Cryptosporidium_parvum_Iowa_II 2 2
Neospora_caninum 6 4
Toxoplasma_gondii_VEG 5 3
Toxoplasma_gondii_ME49 6 4
Toxoplasma_gondii_GT1 5 3
Babesia_bovis_T2Bo_ 2 2
Theileria_parva__ 1 1
Theileria_annulata 1 1
Plasmodium_falciparum_3D7_ 1 1
Plasmodium_vivax_SaI-1_7.0 1 1
Plasmodium_knowlesi_strain_H_ 1 1
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Plasmodium_chabaudi_ 2 2
Plasmodium_berghei_ANKA_ 1 1
Symbiodinium_minutum_clade_B1_v1.2 164 159
Naegleria_gruberi_ 29 29
Trichomonas_vaginalis_ 9 9
Guillardia_theta_CCMP2712_v1.0_ 44 44
Emiliania_huxleyi_CCMP1516_ 125 124
Leptolyngbya_sp._PCC_7376 2 2
Acaryochloris_marina_MBIC11017 2 2
Synechococcus_sp._CC9311 1 1
Microcoleus_sp._PCC_7113 1 1
Geitlerinema_sp._PCC_7407 1 1
Cyanothece_sp._PCC_8802 1 1
Gloeocapsa_sp._PCC_7428 1 1
Microcystis_aeruginosa_NIES-843 1 1
Gloeobacter_violaceus_PCC_7421 2 2
Rivularia_sp._PCC_7116 2 2
Calothrix_sp._PCC_7507 2 2
Anabaena_variabilis_ATCC_29413 2 2
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 2 2
Nostoc_sp._PCC_7120 1 1
Nostoc_sp._PCC_7524 1 1
Mycoplasma_penetrans_HF-2 1 1
Mycoplasma_pneumoniae_309 1 1
Slackia_heliotrinireducens_DSM_20476 2 2
Ilumatobacter_coccineus 1 1
Thermobispora_bispora_DSM_43833 1 1
Nakamurella_multipartita_DSM_44233 2 2
Modestobacter_marinus 2 2
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 2 2
Catenulispora_acidiphila_DSM_44928 2 2
Stackebrandtia_nassauensis_DSM_44728 2 2
Frankia_sp._EAN1pec 1 1
Frankia_alni_ACN14a 1 1
Thermobifida_fusca_YX 1 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 11 5
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 4 4
Kitasatospora_setae_KM-6054 4 4
Streptomyces_coelicolor_A3(2) 3 3
Streptomyces_sp._PAMC26508 3 3
Streptomyces_flavogriseus_ATCC_33331 3 3
Streptomyces_sp._SirexAA-E 3 3
Streptomyces_griseus_subsp._griseus_NBRC_13350 2 2
Streptomyces_avermitilis_MA-4680 3 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_scabiei_87.22 4 4
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2
Actinosynnema_mirum_DSM_43827 2 2
Saccharomonospora_viridis_DSM_43017 1 1
Pseudonocardia_dioxanivorans_CB1190 1 1
Saccharopolyspora_erythraea_NRRL_2338 3 3
Amycolatopsis_mediterranei_U32 4 3
Kribbella_flavida_DSM_17836 2 2
Microlunatus_phosphovorus_NM-1 1 1
Salinispora_arenicola_CNS-205 1 1
Verrucosispora_maris_AB-18-032 2 2
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 2 2
Actinoplanes_sp._N902-109 2 2
Actinoplanes_sp._SE50/110 2 2
Actinoplanes_missouriensis_431 2 2
Segniliparus_rotundus_DSM_44985 1 1
Tsukamurella_paurometabola_DSM_20162 1 1
Rhodococcus_jostii_RHA1 4 4
Rhodococcus_equi_103S 1 1
Rhodococcus_opacus_B4 3 3
Rhodococcus_erythropolis_PR4 2 2
Nocardia_cyriacigeorgica_GUH-2 3 3
Nocardia_farcinica_IFM_10152 1 1
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_sp._JLS 1 1
Mycobacterium_avium_104 2 2
Mycobacterium_vanbaalenii_PYR-1 1 1
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_africanum_GM041182 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_tuberculosis 1 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1
Mycobacterium_rhodesiae_NBB3 1 1
Mycobacterium_ulcerans_Agy99 1 1
Mycobacterium_gilvum_PYR-GCK 1 1
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_marinum_M 2 2
Mycobacterium_smegmatis_str._MC2_155 1 1
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_variabile_DSM_44702 1 1
Corynebacterium_diphtheriae_NCTC_13129 1 1
Sanguibacter_keddieii_DSM_10542 1 1
Beutenbergia_cavernae_DSM_12333 1 1
Jonesia_denitrificans_DSM_20603 1 1
Brachybacterium_faecium_DSM_4810 1 1
Cellulomonas_flavigena_DSM_20109 1 1
Renibacterium_salmoninarum_ATCC_33209 1 1
Micrococcus_luteus_NCTC_2665 1 1
Anaerolinea_thermophila_UNI-1 1 1
Herpetosiphon_aurantiacus_DSM_785 3 3
Roseiflexus_sp._RS-1 2 2
Roseiflexus_castenholzii_DSM_13941 1 1
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Deinococcus_gobiensis_I-0 2 2
Deinococcus_deserti_VCD115 1 1
Deinococcus_maricopensis_DSM_21211 1 1
Deinococcus_proteolyticus_MRP 1 1
Deinococcus_radiodurans_R1 2 2
Megasphaera_elsdenii_DSM_20460 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2 2
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Clostridium_clariflavum_DSM_19732 1 1
Eubacterium_siraeum 1 1
Clostridium_thermocellum_ATCC_27405 1 1
Ruminococcus_sp. 1 1
Ruminococcus_bromii 1 1
Ruminococcus_albus_7 1 1
Desulfosporosinus_orientis_DSM_765 1 1
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfotomaculum_acetoxidans_DSM_771 1 1
Eubacterium_eligens_ATCC_27750 1 1
[Ruminococcus]_obeum 1 1
[Ruminococcus]_torques 1 1
Eubacterium_rectale_M104/1 2 2
Eubacterium_rectale_ATCC_33656 2 2
Coprococcus_sp._ART55/1 1 1
Butyrivibrio_proteoclasticus_B316 4 4
Candidatus_Arthromitus_sp._SFB-mouse-Japan 4 4
Clostridium_beijerinckii_NCIMB_8052 1 1
Clostridium_perfringens_ATCC_13124 1 1
Clostridium_cellulovorans_743B 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1
Moorella_thermoacetica_ATCC_39073 1 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1
Thermoanaerobacter_italicus_Ab9 1 1
Halanaerobium_hydrogeniformans 1 1
Carnobacterium_sp._17-4 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_kefiranofaciens_ZW3 1 1
Lactobacillus_crispatus_ST1 1 1
Lactobacillus_rhamnosus_Lc_705 1 1
Lactobacillus_amylovorus_GRL1118 1 1
Lactobacillus_gasseri_ATCC_33323 2 2
Lactobacillus_buchneri_NRRL_B-30929 1 1
Lactobacillus_buchneri 1 1
Lactobacillus_brevis_ATCC_367 1 1
Lactobacillus_acidophilus_30SC 1 1
Streptococcus_equi_subsp._equi_4047 1 1
Streptococcus_mitis_B6 2 2
Streptococcus_pyogenes_str._Manfredo 1 1
Streptococcus_sanguinis_SK36 1 1
Exiguobacterium_sp._AT1b 1 1
Kyrpidia_tusciae_DSM_2912 1 1
Brevibacillus_brevis_NBRC_100599 3 3
Paenibacillus_sp._JDR-2 1 1
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_mucilaginosus_3016 2 2
Paenibacillus_polymyxa_M1 2 2
Bacillus_selenitireducens_MLS10 1 1
Geobacillus_sp._WCH70 2 2
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_halodurans_C-125 1 1
Bacillus_weihenstephanensis_KBAB4 2 2
Bacillus_thuringiensis_str._Al_Hakam 2 2
Bacillus_cereus_03BB102 4 4
Bacillus_anthracis_str._A0248 3 3
Bacillus_cellulosilyticus_DSM_2522 1 1
Chlorobium_phaeobacteroides_DSM_266 1 1
Saprospira_grandis_str._Lewin 3 3
Niastella_koreensis_GR20-10 1 1
Chitinophaga_pinensis_DSM_2588 3 3
Flexibacter_litoralis_DSM_6794 3 3
Cyclobacterium_marinum_DSM_745 1 1
Fibrella_aestuarina 2 2
Cytophaga_hutchinsonii_ATCC_33406 1 1
Spirosoma_linguale_DSM_74 3 3
Runella_slithyformis_DSM_19594 2 2
Odoribacter_splanchnicus_DSM_20712 1 1
Solitalea_canadensis_DSM_3403 1 1
Aequorivita_sublithincola_DSM_14238 1 1
Flavobacterium_branchiophilum_FL-15 2 2
Flavobacterium_columnare_ATCC_49512 1 1
Flavobacterium_johnsoniae_UW101 1 1
Waddlia_chondrophila_WSU_86-1044 1 1
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Parachlamydia_acanthamoebae_UV-7 2 2
Planctomyces_brasiliensis_DSM_5305 1 1
Rhodopirellula_baltica_SH_1 3 3
Turneriella_parva_DSM_21527 2 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 2 2
Leptospira_interrogans_serovar_Lai_str._IPAV 1 1
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_hyodysenteriae_WA1 1 1
Sphaerochaeta_pleomorpha_str._Grapes 1 1
Thermodesulfatator_indicus_DSM_15286 1 1
Thermodesulfobacterium_sp._OPB45 1 1
Kosmotoga_olearia_TBF_19.5.1 1 1
Granulicella_tundricola_MP5ACTX9 1 1
Candidatus_Koribacter_versatilis_Ellin345 1 1
Terriglobus_saanensis_SP1PR4 1 1
Sebaldella_termitidis_ATCC_33386 1 1
Leptotrichia_buccalis_C-1013-b 1 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
Acidithiobacillus_ferrivorans_SS3 1 1
Desulfarculus_baarsii_DSM_2075 1 1
Desulfobacca_acetoxidans_DSM_11109 1 1
Syntrophobacter_fumaroxidans_MPOB 1 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Desulfococcus_oleovorans_Hxd3 1 1
Geobacter_sulfurreducens_KN400 1 1
Haliangium_ochraceum_DSM_14365 1 1
Sorangium_cellulosum_'So_ce_56' 1 1
Stigmatella_aurantiaca_DW4/3-1 1 1
Myxococcus_xanthus_DK_1622 1 1
Myxococcus_fulvus_HW-1 1 1
Dechloromonas_aromatica_RCB 2 2
Dechlorosoma_suillum_PS 1 1
Chromobacterium_violaceum_ATCC_12472 6 6
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1
Leptothrix_cholodnii_SP-6 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_xenovorans_LB400 5 5
Ralstonia_solanacearum_CFBP2957 2 2
Burkholderia_cenocepacia_HI2424 1 1
Delftia_sp._Cs1-4 2 2
Delftia_acidovorans_SPH-1 1 1
Variovorax_paradoxus_S110 1 1
Acidovorax_sp._JS42 1 1
Acidovorax_citrulli_AAC00-1 3 3
Comamonas_testosteroni_CNB-2 1 1
Bordetella_avium_197N 3 2
Bordetella_pertussis_Tohama_I 1 1
Bordetella_parapertussis_12822 1 1
Bordetella_bronchiseptica_RB50 1 1
Achromobacter_xylosoxidans_A8 1 1
Nitrosomonas_eutropha_C91 1 1
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 1 1
Caulobacter_sp._K31 1 1
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 1 1
Phenylobacterium_zucineum_HLK1 2 2
Sphingopyxis_alaskensis_RB2256 1 1
Novosphingobium_sp._PP1Y 1 1
Novosphingobium_aromaticivorans_DSM_12444 1 1
Sphingobium_sp._SYK-6 1 1
Sphingobium_japonicum_UT26S 1 1
Sphingobium_chlorophenolicum_L-1 1 1
Sphingomonas_wittichii_RW1 1 1
Maricaulis_maris_MCS10 1 1
Hirschia_baltica_ATCC_49814 1 1
Hyphomonas_neptunium_ATCC_15444 1 1
Dinoroseobacter_shibae_DFL_12 1 1
Phaeobacter_gallaeciensis_2.10 1 1
Pseudovibrio_sp._FO-BEG1 2 2
Jannaschia_sp._CCS1 1 1
Ruegeria_sp._TM1040 1 1
Ruegeria_pomeroyi_DSS-3 1 1
Ketogulonigenium_vulgarum_WSH-001 1 1
Roseobacter_litoralis_Och_149 1 1
Roseobacter_denitrificans_OCh_114 1 1
Rhodobacter_sphaeroides_ATCC_17029 1 1
Rhodobacter_capsulatus_SB_1003 1 1
Paracoccus_denitrificans_PD1222 1 1
Tistrella_mobilis_KA081020-065 2 2
Rhodospirillum_centenum_SW 1 1
Rhodospirillum_rubrum_F11 1 1
Azospirillum_lipoferum_4B 1 1
Azospirillum_sp._B510 1 1
Azospirillum_brasilense_Sp245 1 1
Gluconacetobacter_xylinus_NBRC_3288 2 2
Granulibacter_bethesdensis_CGDNIH1 1 1
Polymorphum_gilvum_SL003B-26A1 1 1
Candidatus_Puniceispirillum_marinum_IMCC1322 1 1
Rickettsia_felis_URRWXCal2 1 1
Starkeya_novella_DSM_506 1 1
Xanthobacter_autotrophicus_Py2 2 2
Azorhizobium_caulinodans_ORS_571 1 1
Methylobacterium_chloromethanicum_CM4 1 1
Methylobacterium_extorquens_AM1 2 2
Methylobacterium_sp._4-46 2 2
Methylobacterium_populi_BJ001 1 1
Methylobacterium_nodulans_ORS_2060 2 2
Methylobacterium_radiotolerans_JCM_2831 1 1
Parvibaculum_lavamentivorans_DS-1 1 1
Ochrobactrum_anthropi_ATCC_49188 1 1
Brucella_microti_CCM_4915 1 1
Brucella_pinnipedialis_B2/94 1 1
Brucella_canis_ATCC_23365 1 1
Brucella_suis_ATCC_23445 1 1
Brucella_melitensis_ATCC_23457 1 1
Brucella_ovis_ATCC_25840 1 1
Brucella_abortus_S19 1 1
Sinorhizobium_fredii_NGR234 1 1
Sinorhizobium_medicae_WSM419 2 2
Sinorhizobium_meliloti_AK83 1 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1 1
Rhizobium_etli_CIAT_652 2 2
Rhizobium_leguminosarum_bv._viciae_3841 3 3
Agrobacterium_tumefaciens_str._C58 2 2
Agrobacterium_radiobacter_K84 2 2
Agrobacterium_sp._H13-3 1 1
Agrobacterium_vitis_S4 1 1
Mesorhizobium_sp._BNC1 1 1
Mesorhizobium_opportunistum_WSM2075 1 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1
Mesorhizobium_loti_MAFF303099 1 1
Methylocella_silvestris_BL2 1 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1 1
Pelagibacterium_halotolerans_B2 1 1
Rhodomicrobium_vannielii_ATCC_17100 1 1
Hyphomicrobium_sp._MC1 1 1
Hyphomicrobium_denitrificans_ATCC_51888 1 1
Oligotropha_carboxidovorans_OM4 1 1
Rhodopseudomonas_palustris_BisA53 1 1
Nitrobacter_winogradskyi_Nb-255 1 1
Nitrobacter_hamburgensis_X14 1 1
Bradyrhizobium_japonicum_USDA_110 1 1
Bradyrhizobium_sp._ORS_278 1 1
Methylocystis_sp._SC2 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Aliivibrio_salmonicida_LFI1238 2 2
Vibrio_fischeri_MJ11 1 1
Vibrio_harveyi_ATCC_BAA-1116 4 4
Vibrio_parahaemolyticus_RIMD_2210633 2 2
Vibrio_anguillarum_775 1 1
Vibrio_cholerae_O395 2 2
Ferrimonas_balearica_DSM_9799 1 1
Shewanella_halifaxensis_HAW-EB4 1 1
Shewanella_baltica_OS185 1 1
Alteromonas_sp._SN2 1 1
Hahella_chejuensis_KCTC_2396 1 1
Marinomonas_mediterranea_MMB-1 1 1
Halomonas_elongata_DSM_2581 2 2
Frateuria_aurantia_DSM_6220 1 1
Xanthomonas_axonopodis_pv._citri_str._306 2 2
Allochromatium_vinosum_DSM_180 1 1
Legionella_pneumophila_str._Corby 2 2
Photorhabdus_asymbiotica 2 2
Photorhabdus_luminescens_subsp._laumondii_TTO1 3 3
Xenorhabdus_bovienii_SS-2004 2 2
Xenorhabdus_nematophila_ATCC_19061 3 3
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 2 2
Serratia_proteamaculans_568 1 1
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 2 2
Pectobacterium_atrosepticum_SCRI1043 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PC1 2 2
Erwinia_tasmaniensis_Et1/99 5 5
Erwinia_sp._Ejp617 1 1
Erwinia_pyrifoliae_Ep1/96 3 3
Erwinia_amylovora_ATCC_49946 3 3
Cronobacter_sakazakii_ES15 1 1
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 2 2
Shigella_flexneri_5_str._8401 1 1
Shigella_boydii_CDC_3083-94 1 1
Salmonella_bongori_NCTC_12419 3 3
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1 1
Enterobacter_sp._R4-368 2 2
Citrobacter_rodentium_ICC168 2 2
Pseudomonas_sp._UW4 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1
Pseudomonas_entomophila_L48 2 2
Pseudomonas_syringae_pv._tomato_str._DC3000 11 11
Pseudomonas_fulva_12-X 1 1
Pseudomonas_putida_F1 8 8
Pseudomonas_protegens_Pf-5 2 2
Pseudomonas_fluorescens_SBW25 1 1
Pseudomonas_aeruginosa_UCBPP-PA14 3 3
Pseudomonas_sp._VLB120 7 7
Pyrolobus_fumarii_1A 1 1
Hyperthermus_butylicus_DSM_5456 1 1
Ignisphaera_aggregans_DSM_17230 1 1
Aeropyrum_pernix_K1 1 1
Ignicoccus_hospitalis_KIN4/I 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Thermofilum_sp._1910b 1 1
Vulcanisaeta_distributa_DSM_14429 1 1
Pyrobaculum_sp._1860 1 1
Pyrobaculum_calidifontis_JCM_11548 1 1
Pyrobaculum_arsenaticum_DSM_13514 1 1
Pyrobaculum_oguniense_TE7 1 1
Thermoproteus_neutrophilus_V24Sta 1 1
Pyrobaculum_aerophilum_str._IM2 1 1
Pyrobaculum_islandicum_DSM_4184 1 1
Methanocella_arvoryzae_MRE50 3 3
Methanocella_conradii_HZ254 1 1
Methanocella_paludicola_SANAE 1 1
Methanosaeta_harundinacea_6Ac 1 1
Methanosaeta_thermophila_PT 1 1
Methanosaeta_concilii_GP6 1 1
Methanosalsum_zhilinae_DSM_4017 1 1
Methanohalobium_evestigatum_Z-7303 1 1
Methanococcoides_burtonii_DSM_6242 1 1
Methanosarcina_acetivorans_C2A 1 1
Methanosarcina_mazei_Go1 1 1
Methanosarcina_barkeri_str._Fusaro 1 1
Methanohalophilus_mahii_DSM_5219 1 1
Methanospirillum_hungatei_JF-1 2 2
Methanopyrus_kandleri_AV19 1 1
Ferroglobus_placidus_DSM_10642 2 2
Archaeoglobus_profundus_DSM_5631 2 2
Archaeoglobus_veneficus_SNP6 2 2
Archaeoglobus_fulgidus_DSM_4304 2 2
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_barophilus_MP 1 1
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1
Thermoplasmatales_archaeon_BRNA1 2 2
Thermoplasma_volcanium_GSS1 1 1
Thermoplasma_acidophilum_DSM_1728 1 1
Salinarchaeum_sp._Harcht-Bsk1 1 1
Halopiger_xanaduensis_SH-6 1 1
Haloterrigena_turkmenica_DSM_5511 1 1
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 1 1
Halalkalicoccus_jeotgali_B3 1 1
Methanocaldococcus_jannaschii_DSM_2661 1 1
Methanobrevibacter_sp._AbM4 1 1
Methanobrevibacter_smithii_ATCC_35061 1 1
Aciduliprofundum_sp._MAR08-339 1 1
Aciduliprofundum_boonei_T469 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   57 55
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   3 3
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   3 3
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   6 6
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   4 4
Cryptococcus_neoformans_var._grubii_H99_ 3 2
Cryptococcus_neoformans_B-3501A_ 2 1
Cryptococcus_neoformans_JEC21_ 2 1
Paracoccidioides_brasiliensis_Pb01_ 3 3
Paracoccidioides_brasiliensis_Pb03_ 3 3
Coccidioides_posadasii_str._Silveira_ 3 3
Coccidioides_immitis_RMSCC_3703_ 3 3
Coccidioides_immitis_RMSCC_2394_ 3 3
Coccidioides_immitis_H538.4_ 3 3
Ajellomyces_dermatitidis_ER-3_ 3 3
Histoplasma_capsulatum_H143 3 3
Histoplasma_capsulatum_H88 3 3
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 4 4
Candida_albicans_WO-1_ 1 1
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_VL3 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_AWRI1631 1 1
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 4 4
Batrachochytrium_dendrobatidis_JAM81_ 4 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   19 19
Hordeum_vulgare_22   (Domesticated barley)   36 36
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   20 19
Trypanosoma_brucei_Lister_427_v4.1 3 3
Neospora_caninum_Nc-Liverpool_6.2 6 4
Plasmodium_falciparum_HB3_ 1 1
Plasmodium_falciparum_Dd2_ 1 1
Chroococcidiopsis_thermalis_PCC_7203 1 1
Chamaesiphon_minutus_PCC_6605 3 3
Cyanobium_gracile_PCC_6307 1 1
Synechococcus_sp._CC9902 1 1
Synechococcus_sp._RCC307 1 1
Synechococcus_sp._CC9605 1 1
Synechococcus_sp._WH_8102 1 1
Synechococcus_sp._WH_7803 1 1
Prochlorococcus_marinus_str._MIT_9313 1 1
Prochlorococcus_marinus_str._MIT_9303 1 1
Crinalium_epipsammum_PCC_9333 1 1
Oscillatoria_nigro-viridis_PCC_7112 4 4
Oscillatoria_acuminata_PCC_6304 2 2
Arthrospira_platensis_NIES-39 1 1
Cyanothece_sp._PCC_7822 2 2
Cyanothece_sp._PCC_7424 1 1
Cyanothece_sp._ATCC_51142 1 1
Cyanothece_sp._PCC_8801 1 1
Cyanobacterium_aponinum_PCC_10605 1 1
Stanieria_cyanosphaera_PCC_7437 2 2
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Cylindrospermum_stagnale_PCC_7417 2 2
Anabaena_cylindrica_PCC_7122 2 2
Mycoplasma_pneumoniae_M129-B7 1 1
Mycoplasma_pneumoniae_FH 1 1
Mycoplasma_pneumoniae_M129 1 1
Frankia_sp._CcI3 2 2
Nocardiopsis_alba_ATCC_BAA-2165 1 1
Streptomyces_albus_J1074 1 1
Streptomyces_davawensis_JCM_4913 3 3
Streptomyces_fulvissimus_DSM_40593 2 2
Streptomyces_venezuelae_ATCC_10712 4 4
Streptomyces_collinus_Tu_365 2 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2 2
Saccharothrix_espanaensis_DSM_44229 2 2
Amycolatopsis_mediterranei_RB 4 3
Amycolatopsis_mediterranei_S699 4 3
Amycolatopsis_mediterranei_S699 4 3
Amycolatopsis_orientalis_HCCB10007 4 3
Actinoplanes_friuliensis_DSM_7358 4 3
Rhodococcus_pyridinivorans_SB3094 2 2
Rhodococcus_erythropolis_CCM2595 2 2
Nocardia_brasiliensis_ATCC_700358 6 4
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_sp._JDM601 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_sp._KMS 1 1
Mycobacterium_sp._MCS 1 1
Mycobacterium_canettii_CIPT_140070017 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_canettii_CIPT_140070008 1 1
Mycobacterium_canettii_CIPT_140070010 1 1
Mycobacterium_tuberculosis_EAI5/NITR206 1 1
Mycobacterium_tuberculosis_CAS/NITR204 1 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_H37Ra 1 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1 1
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_H37Rv 1 1
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_bovis_AF2122/97 1 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1 1
Mycobacterium_bovis_BCG_str._Mexico 1 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_gilvum_Spyr1 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Mycobacterium_kansasii_ATCC_12478 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Corynebacterium_pseudotuberculosis_31 1 1
Corynebacterium_diphtheriae_CDCE_8392 1 1
Corynebacterium_diphtheriae_PW8 2 2
Corynebacterium_diphtheriae_C7_(beta) 1 1
Corynebacterium_diphtheriae_31A 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1 1
Deinococcus_peraridilitoris_DSM_19664 1 1
Eubacterium_siraeum_V10Sc8a 1 1
Clostridium_thermocellum_DSM_1313 1 1
Clostridium_acidurici_9a 1 1
Desulfosporosinus_meridiei_DSM_13257 1 1
Clostridium_difficile_BI1 2 1
Clostridium_difficile_R20291 2 1
Clostridium_difficile_CD196 2 1
Roseburia_intestinalis_XB6B4 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 3 3
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1
Clostridium_perfringens_SM101 1 1
Clostridium_perfringens_str._13 1 1
Clostridium_botulinum_BKT015925 3 2
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Thermacetogenium_phaeum_DSM_12270 1 1
Carnobacterium_maltaromaticum_LMA28 1 1
Enterococcus_mundtii_QU_25 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_V583 2 2
Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_W56 1 1
Lactobacillus_casei_LC2W 1 1
Lactobacillus_casei_BD-II 1 1
Lactobacillus_casei_BL23 1 1
Lactobacillus_casei_str._Zhang 1 1
Lactobacillus_rhamnosus_LOCK908 1 1
Lactobacillus_rhamnosus_LOCK900 1 1
Lactobacillus_rhamnosus_ATCC_8530 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_amylovorus_GRL_1112 1 1
Lactobacillus_reuteri_TD1 1 1
Lactobacillus_helveticus_H10 1 1
Lactobacillus_brevis_KB290 1 1
Lactobacillus_acidophilus_La-14 1 1
Lactobacillus_acidophilus_NCFM 1 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1 1
Streptococcus_equi_subsp._zooepidemicus 1 1
Streptococcus_oligofermentans_AS_1.3089 1 1
Streptococcus_pyogenes_HSC5 2 2
Streptococcus_pyogenes_A20 1 1
Streptococcus_pyogenes_MGAS1882 1 1
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_Alab49 1 1
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pyogenes_MGAS10270 1 1
Streptococcus_pyogenes_MGAS2096 1 1
Streptococcus_pyogenes_MGAS9429 2 2
Streptococcus_pyogenes_MGAS6180 2 2
Streptococcus_pyogenes_NZ131 2 2
Streptococcus_pyogenes_MGAS8232 1 1
Streptococcus_pyogenes_MGAS10394 3 3
Streptococcus_pyogenes_MGAS315 1 1
Streptococcus_pyogenes_SSI-1 1 1
Streptococcus_pyogenes_M1_476 1 1
Streptococcus_pyogenes_MGAS5005 1 1
Streptococcus_pyogenes_M1_GAS 1 1
Streptococcus_salivarius_JIM8777 1 1
Paenibacillus_sp._Y412MC10 1 1
Paenibacillus_mucilaginosus_KNP414 1 1
Paenibacillus_mucilaginosus_K02 1 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 3 3
Paenibacillus_polymyxa_CR1 2 2
Paenibacillus_polymyxa_SC2 3 3
Paenibacillus_polymyxa_E681 2 2
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_EGD-e 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1
Bacillus_toyonensis_BCT-7112 2 2
Bacillus_thuringiensis_HD-771 2 2
Bacillus_thuringiensis_HD-789 2 2
Bacillus_thuringiensis_MC28 2 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 4 4
Bacillus_thuringiensis_YBT-1518 5 5
Bacillus_thuringiensis_Bt407 4 4
Bacillus_thuringiensis_serovar_konkukian_str._97-27 3 3
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_BMB171 2 2
Bacillus_thuringiensis_serovar_finitimus_YBT-020 2 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 6 5
Bacillus_cereus_FRI-35 2 2
Bacillus_cereus_biovar_anthracis_str._CI 3 3
Bacillus_cereus_AH820 3 3
Bacillus_cereus_AH187 2 2
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 2 2
Bacillus_cereus_Q1 2 2
Bacillus_cereus_F837/76 2 2
Bacillus_cereus_NC7401 2 2
Bacillus_cereus_E33L 2 2
Bacillus_cereus_ATCC_14579 1 1
Bacillus_cereus_ATCC_10987 2 2
Bacillus_anthracis_str._H9401 3 3
Bacillus_anthracis_str._CDC_684 3 3
Bacillus_anthracis_str._'Ames_Ancestor' 3 3
Bacillus_anthracis_str._Sterne 2 2
Bacillus_anthracis_str._Ames 2 2
Bacillus_anthracis_str._A2012 1 1
Staphylococcus_aureus_Bmb9393 1 1
Staphylococcus_aureus_subsp._aureus_Z172 1 1
Staphylococcus_aureus_subsp._aureus_11819-97 1 1
Staphylococcus_aureus_subsp._aureus_T0131 1 1
Staphylococcus_aureus_subsp._aureus_TW20 1 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1 1
Emticicia_oligotrophica_DSM_17448 1 1
Porphyromonas_gingivalis_TDC60 1 1
Alistipes_shahii_WAL_8301 1 1
Bacteroides_fragilis_NCTC_9343 1 1
Nonlabens_dokdonensis_DSW-6 1 1
Singulisphaera_acidiphila_DSM_18658 2 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 2 2
Leptospira_interrogans_serovar_Lai_str._56601 1 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1 1
Bdellovibrio_exovorus_JSS 2 2
Geobacter_sulfurreducens_PCA 1 1
Sorangium_cellulosum_So0157-2 1 1
Neisseria_meningitidis_M01-240149 1 1
Neisseria_meningitidis_NZ-05/33 1 1
Neisseria_meningitidis_alpha710 1 1
Neisseria_meningitidis_MC58 1 1
Neisseria_gonorrhoeae_FA_1090 1 1
Ralstonia_solanacearum_FQY_4 2 2
Ralstonia_solanacearum_Po82 2 2
Ralstonia_solanacearum_PSI07 1 1
Ralstonia_solanacearum_CMR15 1 1
Ralstonia_solanacearum_GMI1000 2 2
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_lata 1 1
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Bordetella_pertussis_CS 1 1
Bordetella_parapertussis_18323 1 1
Bordetella_parapertussis_Bpp5 1 1
Bordetella_bronchiseptica_253 1 1
Caulobacter_crescentus_CB15 1 1
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 1 1
Leisingera_methylohalidivorans_DSM_14336 1 1
Octadecabacter_antarcticus_307 1 1
Octadecabacter_arcticus_238 1 1
Rhodobacter_sphaeroides_KD131 1 1
Rhodobacter_sphaeroides_ATCC_17025 1 1
Rhodobacter_sphaeroides_2.4.1 1 1
Paracoccus_aminophilus_JCM_7686 1 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1 1
Rhodospirillum_rubrum_ATCC_11170 1 1
Candidatus_Pelagibacter_ubique_HTCC1062 1 1
Methylobacterium_extorquens_DM4 1 1
Methylobacterium_extorquens_PA1 1 1
Brucella_ceti_TE10759-12 1 1
Brucella_ceti_TE28753-12 1 1
Brucella_canis_HSK_A52141 1 1
Brucella_suis_VBI22 1 1
Brucella_suis_1330 1 1
Brucella_suis_1330 1 1
Brucella_melitensis_NI 1 1
Brucella_melitensis_M5-90 1 1
Brucella_melitensis_M28 1 1
Brucella_melitensis_bv._1_str._16M 1 1
Brucella_abortus_A13334 1 1
Brucella_melitensis_biovar_Abortus_2308 1 1
Brucella_abortus_bv._1_str._9-941 1 1
Sinorhizobium_fredii_USDA_257 1 1
Sinorhizobium_meliloti_2011 1 1
Sinorhizobium_meliloti_GR4 1 1
Sinorhizobium_meliloti_Rm41 1 1
Sinorhizobium_meliloti_SM11 1 1
Sinorhizobium_meliloti_BL225C 1 1
Sinorhizobium_meliloti_1021 1 1
Rhizobium_etli_CFN_42 2 2
Rhizobium_etli_bv._mimosae_str._Mim1 2 2
Rhizobium_tropici_CIAT_899 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 2 2
Mesorhizobium_australicum_WSM2073 1 1
Hyphomicrobium_nitrativorans_NL23 1 1
Hyphomicrobium_denitrificans_1NES1 1 1
Oligotropha_carboxidovorans_OM5 1 1
Oligotropha_carboxidovorans_OM5 1 1
Rhodopseudomonas_palustris_DX-1 1 1
Rhodopseudomonas_palustris_TIE-1 1 1
Rhodopseudomonas_palustris_HaA2 1 1
Rhodopseudomonas_palustris_BisB5 1 1
Rhodopseudomonas_palustris_BisB18 1 1
Rhodopseudomonas_palustris_CGA009 1 1
Bradyrhizobium_sp._S23321 2 2
Bradyrhizobium_sp._BTAi1 1 1
Bradyrhizobium_oligotrophicum_S58 2 2
Bradyrhizobium_japonicum_USDA_6 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 1 1
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1 1
Vibrio_nigripulchritudo_VibrioScope 1 1
Vibrio_cholerae_O395 2 2
Vibrio_cholerae_IEC224 1 1
Vibrio_cholerae_O1_str._2010EL-1786 1 1
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1 1
Shewanella_baltica_BA175 1 1
Glaciecola_psychrophila_170 2 2
Thalassolituus_oleivorans_MIL-1 1 1
Xanthomonas_citri_subsp._citri_Aw12879 2 2
Xanthomonas_axonopodis_pv._citrumelo_F1 1 1
Xanthomonas_axonopodis_Xac29-1 2 2
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 2 2
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 2 2
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 2 2
Morganella_morganii_subsp._morganii_KT 1 1
Rahnella_aquatilis_HX2 1 1
Yersinia_pseudotuberculosis_PB1/+ 1 1
Yersinia_pseudotuberculosis_YPIII 1 1
Yersinia_pseudotuberculosis_IP_32953 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 3 3
Yersinia_enterocolitica_subsp._palearctica_Y11 4 4
Serratia_marcescens_WW4 1 1
Dickeya_dadantii_Ech586 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Erwinia_pyrifoliae_DSM_12163 3 3
Erwinia_amylovora_CFBP1430 3 3
Shigella_flexneri_2002017 1 1
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 1 1
Shigella_boydii_Sb227 1 1
Salmonella_bongori_N268-08 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 4 4
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 2 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Escherichia_coli_E24377A 2 2
Escherichia_coli_E._coli_PMV-1 3 3
Escherichia_coli_JJ1886 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_APEC_O78 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_NA114 1 1
Escherichia_coli_P12b 1 1
Escherichia_coli_str._'clone_D_i2' 2 2
Escherichia_coli_str._'clone_D_i14' 2 2
Escherichia_coli_UM146 2 2
Escherichia_coli_042 1 1
Escherichia_coli_Xuzhou21 2 2
Escherichia_coli_UMNK88 2 2
Escherichia_coli_O83:H1_str._NRG_857C 2 2
Escherichia_coli_ABU_83972 2 2
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_LF82 1 1
Escherichia_coli_UMN026 1 1
Escherichia_coli_55989 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_SMS-3-5 1 1
Escherichia_coli_SE15 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_APEC_O1 1 1
Escherichia_coli_O103:H2_str._12009 2 2
Escherichia_coli_536 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 2 2
Escherichia_coli_O55:H7_str._RM12579 3 3
Escherichia_coli_O55:H7_str._CB9615 3 3
Escherichia_coli_O26:H11_str._11368 2 2
Escherichia_coli_O111:H-_str._11128 2 2
Escherichia_coli_O127:H6_str._E2348/69 2 2
Escherichia_coli_O157:H7_str._TW14359 2 2
Escherichia_coli_O157:H7_str._EC4115 1 1
Escherichia_coli_O157:H7_str._Sakai 2 2
Escherichia_coli_O157:H7_str._EDL933 2 2
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 1 1
Escherichia_coli_str._K-12_substr._W3110 1 1
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_EcWSU1 1 1
Pseudomonas_syringae_pv._phaseolicola_1448A 7 7
Pseudomonas_syringae_pv._syringae_B728a 8 8
Pseudomonas_monteilii_SB3101 2 2
Pseudomonas_monteilii_SB3078 2 2
Pseudomonas_putida_H8234 2 2
Pseudomonas_putida_HB3267 9 9
Pseudomonas_putida_NBRC_14164 6 6
Pseudomonas_putida_DOT-T1E 6 6
Pseudomonas_putida_S16 3 3
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_W619 4 4
Pseudomonas_putida_ND6 4 4
Pseudomonas_putida_KT2440 11 11
Pseudomonas_putida_GB-1 7 7
Pseudomonas_protegens_CHA0 1 1
Pseudomonas_fluorescens_F113 9 9
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_aeruginosa_SCV20265 4 4
Pseudomonas_aeruginosa_MTB-1 3 3
Pseudomonas_aeruginosa_LES431 3 3
Pseudomonas_aeruginosa_RP73 4 4
Pseudomonas_aeruginosa_B136-33 3 3
Pseudomonas_aeruginosa_PA1R 4 4
Pseudomonas_aeruginosa_PA1 4 4
Pseudomonas_aeruginosa_DK2 4 4
Pseudomonas_aeruginosa_NCGM2.S1 3 3
Pseudomonas_aeruginosa_M18 4 4
Pseudomonas_aeruginosa_LESB58 3 3
Pseudomonas_aeruginosa_PA7 1 1
Pseudomonas_aeruginosa_PAO1 4 4
Acinetobacter_baumannii__ATCC_19606 1 1
Aeropyrum_camini_SY1_=_JCM_12091 1 1
Methanomethylovorans_hollandica_DSM_15978 1 1
Methanolobus_psychrophilus_R15 1 1
Methanosarcina_mazei_Tuc01 1 1
Archaeoglobus_sulfaticallidus_PM70-1 1 1
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 1 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1
Natronococcus_occultus_SP4 1 1
Haloarcula_hispanica_N601 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   24 24
Pan_troglodytes_69_2.1.4   (Chimpanzee)   22 22
Gorilla_gorilla_69_3.1   (Western gorilla)   24 24
Pongo_abelii_69_2   (Sumatran orangutan)   21 21
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   20 20
Macaca_mulatta_69_1   (Rhesus monkey)   21 21
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   24 24
Otolemur_garnettii_69_3   (Small-eared galago)   23 23
Microcebus_murinus_69_1   (Gray mouse lemur)   21 19
Rattus_norvegicus_69_3.4   (Norway rat)   22 22
Mus_musculus_69_38   (House mouse)   25 25
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   18 17
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   23 23
Cavia_porcellus_69_3   (Domestic guinea pig)   26 26
Oryctolagus_cuniculus_69_2   (Rabbit)   27 27
Ochotona_princeps_69   (American pika)   24 22
Tupaia_belangeri_69   (Northern tree shrew)   18 18
Sus_scrofa_69_10.2   (Pig)   27 27
Bos_taurus_69_3.1   (Cattle)   25 25
Vicugna_pacos_69_1   (Alpaca)   15 14
Tursiops_truncatus_69_1   (Bottlenose dolphin)   20 20
Mustela_putorius_furo_69_1.0   (Domestic ferret)   23 23
Ailuropoda_melanoleuca_69_1   (Giant panda)   21 21
Canis_familiaris_69_3.1   (Dog)   23 23
Felis_catus_69   (Domestic cat)   16 16
Equus_caballus_69_2   (Horse)   25 25
Myotis_lucifugus_69_2.0   (Little brown bat)   32 32
Pteropus_vampyrus_69_1   (Large flying fox)   23 23
Sorex_araneus_69_1   (European shrew)   17 17
Erinaceus_europaeus_69   (Western European hedgehog)   19 19
Procavia_capensis_69_1   (Cape rock hyrax)   21 20
Loxodonta_africana_69_3   (African savanna elephant)   23 23
Echinops_telfairi_69   (Small Madagascar hedgehog)   17 17
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   18 17
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   16 15
Macropus_eugenii_69_1.0   (Tammar wallaby)   20 18
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   22 22
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   27 26
Ornithorhynchus_anatinus_69_5   (Platypus)   23 23
Petromyzon_marinus_69_7.0   (Sea lamprey)   21 19
Meleagris_gallopavo_69_2   (Turkey)   23 23
Gallus_gallus_69_2   (Chicken)   25 25
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   17 17
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   29 29
Anolis_carolinensis_69_2.0   (Green anole)   28 28
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   33 32
Latimeria_chalumnae_69_1   (Coelacanth)   36 34
Gadus_morhua_69_1   (Atlantic cod)   40 40
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   21 21
Takifugu_rubripes_69_4   (Torafugu)   24 24
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   25 25
Oryzias_latipes_69_1   (Japanese medaka)   27 27
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   39 39
Oreochromis_niloticus_69_1.0   (Nile tilapia)   35 33
Danio_rerio_69_9   (Zebrafish)   48 45
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   18 18
Ciona_intestinalis_69   (Vase tunicate)   17 17
Drosophila_melanogaster_69_5   (Fruit fly)   3 3
Caenorhabditis_elegans_69_215   (Roundworm)   3 3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1
Arabidopsis_thaliana_10   (Thale cress)   20 20

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   84 84
Homo_sapiens__(NCBI_version)   (Human)   43 43
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   25 25
Heliconius_numata__(Incomplete) 1 1
Loa_loa_v3.3_(Request)   (Eye worm)   3 3
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   4 4
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3 3
Moniliophthora_perniciosa_FA553__(Genome_survey) 10 10
Lotus_japonicus__(Early_assembly) 33 32
Malus_x_domestica_(Duplicate)   (Apple)   38 37
Ricinus_communis__(Early_assembly)   (Castor bean)   20 20
Nicotiana_benthamiana_0.4.4_(Early_draft) 34 34
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   22 22
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   24 24
Phoenix_dactylifera__(Early_draft)   (Date palm)   14 14
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 4 4
NCBI_plasmid_sequences_(Plasmids) 119 112
STRING_v9.0.5_(STRING) 1885 1867
Uniprot_2018_03_genome 30979 30491
NCBI_2017_08_genome 84218 83520
Protozoadb_2010_08_(Protozoadb) 101 97
UniProt__viral_sequences_(Viral) 107 107
TargetDB__(Targets) 111 111
NCBI_viral_sequences_(Viral) 169 169
PDB_chains_(SCOP_1.75)_(PDB) 57 54
Protein_Data_Bank_(all_PDB_sequenc) 1059 1026
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1723 1723

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]