Domain combinations for Fibrinogen C-terminal domain-like superfamily in groups of genomes

• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Click on a genome below to view all domain combinations containing a Fibrinogen C-terminal domain-like domain in that genome.

Complete genomes

Genome		Number	Proteins
Homo_sapiens_76_38	(Human)	101	101
Pan_troglodytes_76_2.1.4	(Chimpanzee)	30	30
Gorilla_gorilla_76_3.1	(Western gorilla)	37	37
Pongo_abelii_76_2	(Sumatran orangutan)	34	34
Nomascus_leucogenys_76_1.0	(Northern white-cheeked gibbon)	29	29
Papio_anubis_76	(Olive baboon)	33	32
Macaca_mulatta_76_1	(Rhesus monkey)	58	58
Callithrix_jacchus_76_3.2.1	(White-tufted-ear marmoset)	69	69
Otolemur_garnettii_76_3	(Small-eared galago)	32	32
Microcebus_murinus_76_1	(Gray mouse lemur)	35	33
Rattus_norvegicus_76_5.0	(Norway rat)	32	32
Mus_musculus_76_38	(House mouse)	40	39
Dipodomys_ordii_76_1	(Ord's kangaroo rat)	28	26
Ictidomys_tridecemlineatus_76_2	(Thirteen-lined ground squirrel)	32	31
Heterocephalus_glaber_v1.7-2	(Naked mole-rat)	29	27
Cavia_porcellus_76_3	(Domestic guinea pig)	37	37
Oryctolagus_cuniculus_76_2	(Rabbit)	36	36
Ochotona_princeps_76	(American pika)	30	27
Tupaia_belangeri_76	(Northern tree shrew)	33	27
Sus_scrofa_76_10.2	(Pig)	30	30
Bos_taurus_76_3.1	(Cattle)	35	35
Ovis_aries_76_3.1	(Sheep)	32	32
Vicugna_pacos_76_1	(Alpaca)	17	16
Tursiops_truncatus_76_1	(Bottlenose dolphin)	30	28
Mustela_putorius_furo_76_1.0	(Domestic ferret)	31	31
Ailuropoda_melanoleuca_76_1	(Giant panda)	30	30
Canis_familiaris_76_3.1	(Dog)	36	36
Felis_catus_76_6.2	(Domestic cat)	26	26
Equus_caballus_76_2	(Horse)	33	33
Myotis_lucifugus_76_2.0	(Little brown bat)	25	25
Pteropus_vampyrus_76_1	(Large flying fox)	28	26
Sorex_araneus_76_1	(European shrew)	22	21
Erinaceus_europaeus_76	(Western European hedgehog)	33	30
Procavia_capensis_76_1	(Cape rock hyrax)	27	26
Loxodonta_africana_76_3	(African savanna elephant)	38	37
Echinops_telfairi_76	(Small Madagascar hedgehog)	29	24
Dasypus_novemcinctus_76_2	(Nine-banded armadillo)	31	31
Choloepus_hoffmanni_76_1	(Hoffmann's two-fingered sloth)	27	26
Macropus_eugenii_76_1.0	(Tammar wallaby)	35	29
Sarcophilus_harrisii_76_7.0	(Tasmanian devil)	32	32
Monodelphis_domestica_76_5	(Gray short-tailed opossum)	34	34
Ornithorhynchus_anatinus_76_5	(Platypus)	26	26
Saccoglossus_kowalevskii_v3.0		67	65
Petromyzon_marinus_76_7.0	(Sea lamprey)	25	25
Meleagris_gallopavo_76_2	(Turkey)	41	41
Gallus_gallus_76_4	(Chicken)	33	33
Anas_platyrhynchos_76_1.0	(Mallard)	30	30
Taeniopygia_guttata_76_3.2.4	(Zebra finch)	28	28
Ficedula_albicollis_76_1.0	(Collared flycatcher)	28	28
Pelodiscus_sinensis_76_1.0	(Chinese soft-shelled turtle)	49	48
Anolis_carolinensis_76_2.0	(Green anole)	37	37
Xenopus_laevis_	(African clawed frog)	89	89
Xenopus_tropicalis_76_4.2	(Tropical clawed frog)	81	81
Latimeria_chalumnae_76_1	(Coelacanth)	42	41
Lepisosteus_oculatus_76	(Spotted gar)	44	44
Gadus_morhua_76_1	(Atlantic cod)	50	49
Tetraodon_nigroviridis_76_8	(Spotted green pufferfish)	56	56
Takifugu_rubripes_76_4	(Torafugu)	153	153
Gasterosteus_aculeatus_76_1	(Three-spined stickleback)	58	58
Oryzias_latipes_76_1	(Japanese medaka)	54	54
Xiphophorus_maculatus_76_4.4.2	(Southern platyfish)	49	49
Poecilia_formosa_76	(Amazon molly)	52	52
Oreochromis_niloticus_76_1.0	(Nile tilapia)	66	66
Astyanax_mexicanus_76	(Mexican tetra)	48	47
Danio_rerio_76_9	(Zebrafish)	87	87
Oikopleura_dioica		12	10
Ciona_savignyi_76_2.0	(Pacific transparent sea squirt)	112	106
Ciona_intestinalis_76	(Vase tunicate)	55	55
Strongylocentrotus_purpuratus_v3.1	(Purple sea urchin)	66	62
Adineta_vaga		14	14
Octopus_bimaculoides_280		15	15
Crassostrea_gigas_22	(Pacific oyster)	228	199
Lottia_gigantea_	(Owl limpet)	72	72
Helobdella_robusta_		119	117
Capitella_sp._I_		142	142
Danaus_plexippus_OGS1.0	(Monarch butterfly)	3	3
Heliconius_melpomene_	(Postman butterfly)	3	3
Bombyx_mori_	(Domestic silkworm)	3	3
Nasonia_vitripennis_	(Jewel wasp)	1	1
Apis_mellifera_38.2d_(Not_maintained)	(Honey bee)	3	3
Harpegnathos_saltator_v3.3	(Jerdon's jumping ant)	2	2
Linepithema_humile_v1.1	(Argentine ant)	3	3
Pogonomyrmex_barbatus_v1.2	(Red harvester ant)	2	2
Solenopsis_invicta_v.2.2.3	(Red fire ant)	2	2
Acromyrmex_echinatior_v3.8	(Panamanian leafcutter ant)	2	2
Atta_cephalotes_v1.1		2	2
Camponotus_floridanus_v3.3	(Florida carpenter ant)	2	2
Lucilia_cuprina	(Australian sheep blowfly)	22	19
Drosophila_grimshawi_1.3		45	43
Drosophila_willistoni_1.3		38	35
Drosophila_pseudoobscura_2.13		30	30
Drosophila_persimilis_1.3		29	28
Drosophila_suzukii		45	41
Drosophila_yakuba_1.3		14	14
Drosophila_simulans_1.3		15	15
Drosophila_sechellia_1.3		15	15
Drosophila_melanogaster_76_5	(Fruit fly)	24	24
Drosophila_erecta_1.3		16	16
Drosophila_ananassae_1.3		44	43
Drosophila_virilis_1.2		34	34
Drosophila_mojavensis_1.3		22	22
Megaselia_scalaris_22		2	2
Aedes_aegypti_55_(Not_maintained)	(Yellow fever mosquito)	35	35
Culex_pipiens_quinquefasciatus_	(Southern house mosquito)	99	93
Anopheles_darlingi_22	(American malaria mosquito)	37	36
Anopheles_gambiae_49_3j	(African malaria mosquito)	49	49
Tribolium_castaneum_3.0	(Red flour beetle)	8	8
Pediculus_humanus_corporis__(Early_assembly)	(Human body louse)	2	2
Acyrthosiphon_pisum_	(Pea aphid)	3	3
Rhodnius_prolixus_22		2	2
Daphnia_pulex_	(Common water flea)	42	40
Strigamia_maritima_22		19	19
Sarcoptes_scabiei		1	1
Tetranychus_urticae_	(Two-spotted spider mite)	2	2
Ixodes_scapularis__(Preliminary)	(Black-legged tick)	27	27
Pristionchus_pacificus_		3	3
Meloidogyne_hapla_		1	1
Onchocerca_volvulus_22		2	2
Brugia_malayi_WS250	(Agent of lymphatic filariasis)	3	3
Caenorhabditis_japonica_		5	5
Caenorhabditis_brenneri_		8	8
Caenorhabditis_remanei_		8	8
Caenorhabditis_elegans_76_235	(Roundworm)	8	8
Caenorhabditis_briggsae_2		5	5
Trichinella_spiralis_22		3	3
Thelohanellus_kitauei		1	1
Acropora_digitifera_v1.0		194	172
Nematostella_vectensis_1.0	(Starlet sea anemone)	147	142
Hydra_vulgaris		20	17
Amphimedon_queenslandica		271	257
Trichoplax_adhaerens_		15	15
Proterospongia_sp._ATCC_50818_		7	7
Monosiga_brevicollis_		19	9
Bathycoccus_prasinos_		1	1
Micromonas_pusilla_CCMP1545_v3.0		1	1
Bigelowiella_natans_CCMP2755_22		1	1
Cyanophora_paradoxa_		1	1
Albugo_laibachii_22		1	1
Pythium_iwayamai_DAOM_BR242034_22		1	1
Phytophthora_infestans_T30-4_		1	1
Cryptosporidium_hominis		2	2
Cryptosporidium_muris		2	2
Cryptosporidium_parvum_Iowa_II		2	2
Babesia_bovis_T2Bo_		4	4
Theileria_parva__		2	2
Theileria_annulata		2	2
Plasmodium_falciparum_3D7_		2	2
Plasmodium_vivax_SaI-1_7.0		2	2
Plasmodium_knowlesi_strain_H_		2	2
Plasmodium_yoelii_ssp._yoelii_1_		2	2
Plasmodium_chabaudi_		1	1
Plasmodium_berghei_ANKA_		1	1
Symbiodinium_minutum_clade_B1_v1.2		2	2
Naegleria_gruberi_		14	14
Guillardia_theta_CCMP2712_v1.0_		2	2
Ilumatobacter_coccineus		1	1
Corynebacterium_aurimucosum_ATCC_700975		1	1
Arthrobacter_arilaitensis_Re117		1	1
Rothia_mucilaginosa_DY-18		4	3
Rothia_dentocariosa_ATCC_17931		1	1
Turneriella_parva_DSM_21527		1	1
Bacteriovorax_marinus_SJ		6	2
Bdellovibrio_bacteriovorus_HD100		4	2
Haliangium_ochraceum_DSM_14365		9	9
Sorangium_cellulosum_'So_ce_56'		1	1
Anaeromyxobacter_sp._Fw109-5		1	1
Herminiimonas_arsenicoxydans		1	1
Marinomonas_mediterranea_MMB-1		1	1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains

Genome		Number	Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	113	112
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)	(Fruit fly)	23	23
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)	(African malaria mosquito)	49	49
Ascaris_suum_Victoria/Ghent_	(Pig roundworm)	6	6
Caenorhabditis_elegans_WormBase_WS218__(WormBase)	(Roundworm)	7	7
Plasmodium_falciparum_HB3_		2	2
Plasmodium_falciparum_Dd2_		2	2
Actinomyces_odontolyticus_ATCC_17982		2	2
Nonlabens_dokdonensis_DSW-6		1	1
Bdellovibrio_bacteriovorus_str._Tiberius		4	2
Sorangium_cellulosum_So0157-2		2	1

Longest transcript per gene

Genome		Number	Proteins
Homo_sapiens_69_37	(Human)	37	37
Pan_troglodytes_69_2.1.4	(Chimpanzee)	30	30
Gorilla_gorilla_69_3.1	(Western gorilla)	31	31
Pongo_abelii_69_2	(Sumatran orangutan)	32	32
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	29	29
Macaca_mulatta_69_1	(Rhesus monkey)	32	32
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	28	28
Otolemur_garnettii_69_3	(Small-eared galago)	32	32
Microcebus_murinus_69_1	(Gray mouse lemur)	35	33
Rattus_norvegicus_69_3.4	(Norway rat)	29	29
Mus_musculus_69_38	(House mouse)	33	32
Dipodomys_ordii_69_1	(Ord's kangaroo rat)	28	26
Ictidomys_tridecemlineatus_69_2	(Thirteen-lined ground squirrel)	29	28
Cavia_porcellus_69_3	(Domestic guinea pig)	32	32
Oryctolagus_cuniculus_69_2	(Rabbit)	31	30
Ochotona_princeps_69	(American pika)	30	27
Tupaia_belangeri_69	(Northern tree shrew)	33	27
Sus_scrofa_69_10.2	(Pig)	29	29
Bos_taurus_69_3.1	(Cattle)	28	28
Vicugna_pacos_69_1	(Alpaca)	17	16
Tursiops_truncatus_69_1	(Bottlenose dolphin)	30	28
Mustela_putorius_furo_69_1.0	(Domestic ferret)	31	31
Ailuropoda_melanoleuca_69_1	(Giant panda)	30	30
Canis_familiaris_69_3.1	(Dog)	27	27
Felis_catus_69	(Domestic cat)	25	24
Equus_caballus_69_2	(Horse)	30	30
Myotis_lucifugus_69_2.0	(Little brown bat)	24	24
Pteropus_vampyrus_69_1	(Large flying fox)	28	26
Sorex_araneus_69_1	(European shrew)	22	21
Erinaceus_europaeus_69	(Western European hedgehog)	33	30
Procavia_capensis_69_1	(Cape rock hyrax)	27	26
Loxodonta_africana_69_3	(African savanna elephant)	31	30
Echinops_telfairi_69	(Small Madagascar hedgehog)	29	24
Dasypus_novemcinctus_69_2	(Nine-banded armadillo)	29	23
Choloepus_hoffmanni_69_1	(Hoffmann's two-fingered sloth)	27	26
Macropus_eugenii_69_1.0	(Tammar wallaby)	35	29
Sarcophilus_harrisii_69_7.0	(Tasmanian devil)	26	26
Monodelphis_domestica_69_5	(Gray short-tailed opossum)	32	32
Ornithorhynchus_anatinus_69_5	(Platypus)	23	23
Petromyzon_marinus_69_7.0	(Sea lamprey)	24	24
Meleagris_gallopavo_69_2	(Turkey)	28	28
Gallus_gallus_69_2	(Chicken)	32	30
Taeniopygia_guttata_69_3.2.4	(Zebra finch)	27	27
Pelodiscus_sinensis_69_1.0	(Chinese soft-shelled turtle)	43	42
Anolis_carolinensis_69_2.0	(Green anole)	34	34
Xenopus_tropicalis_69_4.2	(Tropical clawed frog)	61	61
Latimeria_chalumnae_69_1	(Coelacanth)	37	36
Gadus_morhua_69_1	(Atlantic cod)	37	36
Tetraodon_nigroviridis_69_8	(Spotted green pufferfish)	45	45
Takifugu_rubripes_69_4	(Torafugu)	42	42
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	40	40
Oryzias_latipes_69_1	(Japanese medaka)	44	44
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	48	48
Oreochromis_niloticus_69_1.0	(Nile tilapia)	50	50
Danio_rerio_69_9	(Zebrafish)	57	57
Ciona_savignyi_69_2.0	(Pacific transparent sea squirt)	79	73
Ciona_intestinalis_69	(Vase tunicate)	49	49
Drosophila_melanogaster_69_5	(Fruit fly)	14	14
Caenorhabditis_elegans_69_215	(Roundworm)	5	5

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others

Genome		Number	Proteins
Homo_sapiens_75_37_(old_version_GRC)	(Human)	100	100
Homo_sapiens__(NCBI_version)	(Human)	47	47
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)	(House mouse)	32	31
Heliconius_numata__(Incomplete)		1	1
Loa_loa_v3.3_(Request)	(Eye worm)	5	5
Wuchereria_bancrofti_v1.0_(Request)	(Agent of lymphatic filariasis)	3	3
Brugia_malayi_v1.0_(Duplicate)	(Agent of lymphatic filariasis)	1	1
NCBI_plasmid_sequences_(Plasmids)		1	1
Protein_Data_Bank_(all_PDB_sequenc)		307	307
TargetDB__(Targets)		20	20
Protozoadb_2010_08_(Protozoadb)		36	36
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ)		994	994
PDB_chains_(SCOP_1.75)_(PDB)		21	21
STRING_v9.0.5_(STRING)		2190	2119
Uniprot_2018_03_genome		16498	15843
NCBI_2017_08_genome		18019	17713
NCBI_viral_sequences_(Viral)		14	14
UniProt__viral_sequences_(Viral)		2	2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]