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Domain combinations for Bcl-2 inhibitors of programmed cell death superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Bcl-2 inhibitors of programmed cell death domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   74 74
Pan_troglodytes_76_2.1.4   (Chimpanzee)   15 15
Gorilla_gorilla_76_3.1   (Western gorilla)   19 19
Pongo_abelii_76_2   (Sumatran orangutan)   14 14
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   14 14
Papio_anubis_76   (Olive baboon)   17 17
Macaca_mulatta_76_1   (Rhesus monkey)   22 21
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   27 27
Otolemur_garnettii_76_3   (Small-eared galago)   15 15
Microcebus_murinus_76_1   (Gray mouse lemur)   8 8
Rattus_norvegicus_76_5.0   (Norway rat)   16 16
Mus_musculus_76_38   (House mouse)   37 37
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   10 10
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   19 19
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   12 12
Cavia_porcellus_76_3   (Domestic guinea pig)   14 14
Oryctolagus_cuniculus_76_2   (Rabbit)   17 17
Ochotona_princeps_76   (American pika)   14 14
Tupaia_belangeri_76   (Northern tree shrew)   9 9
Sus_scrofa_76_10.2   (Pig)   15 15
Bos_taurus_76_3.1   (Cattle)   19 19
Ovis_aries_76_3.1   (Sheep)   16 16
Vicugna_pacos_76_1   (Alpaca)   4 4
Tursiops_truncatus_76_1   (Bottlenose dolphin)   15 14
Mustela_putorius_furo_76_1.0   (Domestic ferret)   13 13
Ailuropoda_melanoleuca_76_1   (Giant panda)   16 16
Canis_familiaris_76_3.1   (Dog)   18 18
Felis_catus_76_6.2   (Domestic cat)   14 14
Equus_caballus_76_2   (Horse)   16 16
Myotis_lucifugus_76_2.0   (Little brown bat)   14 14
Pteropus_vampyrus_76_1   (Large flying fox)   14 13
Sorex_araneus_76_1   (European shrew)   8 8
Erinaceus_europaeus_76   (Western European hedgehog)   5 5
Procavia_capensis_76_1   (Cape rock hyrax)   10 10
Loxodonta_africana_76_3   (African savanna elephant)   18 18
Echinops_telfairi_76   (Small Madagascar hedgehog)   8 8
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   14 14
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   9 8
Macropus_eugenii_76_1.0   (Tammar wallaby)   10 9
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   14 14
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   13 13
Ornithorhynchus_anatinus_76_5   (Platypus)   6 6
Saccoglossus_kowalevskii_v3.0 16 16
Petromyzon_marinus_76_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_76_2   (Turkey)   13 13
Gallus_gallus_76_4   (Chicken)   10 10
Anas_platyrhynchos_76_1.0   (Mallard)   13 13
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   8 8
Ficedula_albicollis_76_1.0   (Collared flycatcher)   10 10
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   12 12
Anolis_carolinensis_76_2.0   (Green anole)   11 11
Xenopus_laevis_   (African clawed frog)   30 30
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   11 11
Latimeria_chalumnae_76_1   (Coelacanth)   13 13
Lepisosteus_oculatus_76   (Spotted gar)   14 14
Gadus_morhua_76_1   (Atlantic cod)   11 11
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   12 12
Takifugu_rubripes_76_4   (Torafugu)   20 20
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   14 14
Oryzias_latipes_76_1   (Japanese medaka)   11 11
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   12 12
Poecilia_formosa_76   (Amazon molly)   11 11
Oreochromis_niloticus_76_1.0   (Nile tilapia)   16 16
Astyanax_mexicanus_76   (Mexican tetra)   19 19
Danio_rerio_76_9   (Zebrafish)   28 28
Oikopleura_dioica 2 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_76   (Vase tunicate)   4 4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   11 11
Adineta_vaga 5 5
Octopus_bimaculoides_280 8 8
Crassostrea_gigas_22   (Pacific oyster)   9 8
Lottia_gigantea_   (Owl limpet)   8 8
Helobdella_robusta_ 11 11
Capitella_sp._I_ 13 13
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2 2
Heliconius_melpomene_   (Postman butterfly)   1 1
Bombyx_mori_   (Domestic silkworm)   1 1
Nasonia_vitripennis_   (Jewel wasp)   1 1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2 2
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1 1
Linepithema_humile_v1.1   (Argentine ant)   1 1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1 1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1 1
Atta_cephalotes_v1.1 1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1 1
Lucilia_cuprina   (Australian sheep blowfly)   2 2
Drosophila_grimshawi_1.3 2 2
Drosophila_willistoni_1.3 2 2
Drosophila_pseudoobscura_2.13 2 2
Drosophila_persimilis_1.3 2 2
Drosophila_suzukii 2 2
Drosophila_yakuba_1.3 2 2
Drosophila_simulans_1.3 1 1
Drosophila_sechellia_1.3 2 2
Drosophila_melanogaster_76_5   (Fruit fly)   2 2
Drosophila_erecta_1.3 2 2
Drosophila_ananassae_1.3 2 2
Drosophila_virilis_1.2 2 2
Drosophila_mojavensis_1.3 2 2
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   2 2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   2 2
Anopheles_darlingi_22   (American malaria mosquito)   3 3
Anopheles_gambiae_49_3j   (African malaria mosquito)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   1 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   1 1
Rhodnius_prolixus_22 2 2
Daphnia_pulex_   (Common water flea)   2 2
Strigamia_maritima_22 3 3
Sarcoptes_scabiei 2 2
Tetranychus_urticae_   (Two-spotted spider mite)   7 7
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3 3
Pristionchus_pacificus_ 2 2
Onchocerca_volvulus_22 1 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2 2
Caenorhabditis_japonica_ 2 2
Caenorhabditis_remanei_ 1 1
Caenorhabditis_elegans_76_235   (Roundworm)   1 1
Caenorhabditis_briggsae_2 1 1
Trichinella_spiralis_22 1 1
Hymenolepis_microstoma_ 3 3
Echinococcus_multilocularis_ 3 3
Echinococcus_granulosus_ 4 3
Taenia_solium_   (Pork tapeworm)   2 2
Schistosoma_mansoni_ 5 5
Mnemiopsis_leidyi   (Sea walnut)   1 1
Acropora_digitifera_v1.0 9 9
Nematostella_vectensis_1.0   (Starlet sea anemone)   14 14
Hydra_vulgaris 13 13
Amphimedon_queenslandica 7 7
Trichoplax_adhaerens_ 3 3
Melampsora_laricis-populina_ 1 1
Anabaena_variabilis_ATCC_29413 1 1
Nostoc_sp._PCC_7120 1 1
Providencia_stuartii_MRSN_2154 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   21 21
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2 2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1 1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1 1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1 1

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   15 15
Pan_troglodytes_69_2.1.4   (Chimpanzee)   14 14
Gorilla_gorilla_69_3.1   (Western gorilla)   14 14
Pongo_abelii_69_2   (Sumatran orangutan)   14 14
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   14 14
Macaca_mulatta_69_1   (Rhesus monkey)   13 13
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   15 15
Otolemur_garnettii_69_3   (Small-eared galago)   15 15
Microcebus_murinus_69_1   (Gray mouse lemur)   8 8
Rattus_norvegicus_69_3.4   (Norway rat)   18 18
Mus_musculus_69_38   (House mouse)   18 18
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   10 10
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   16 16
Cavia_porcellus_69_3   (Domestic guinea pig)   14 14
Oryctolagus_cuniculus_69_2   (Rabbit)   14 14
Ochotona_princeps_69   (American pika)   14 14
Tupaia_belangeri_69   (Northern tree shrew)   9 9
Sus_scrofa_69_10.2   (Pig)   14 14
Bos_taurus_69_3.1   (Cattle)   16 16
Vicugna_pacos_69_1   (Alpaca)   4 4
Tursiops_truncatus_69_1   (Bottlenose dolphin)   15 14
Mustela_putorius_furo_69_1.0   (Domestic ferret)   13 13
Ailuropoda_melanoleuca_69_1   (Giant panda)   14 14
Canis_familiaris_69_3.1   (Dog)   13 13
Felis_catus_69   (Domestic cat)   13 13
Equus_caballus_69_2   (Horse)   15 15
Myotis_lucifugus_69_2.0   (Little brown bat)   13 13
Pteropus_vampyrus_69_1   (Large flying fox)   14 13
Sorex_araneus_69_1   (European shrew)   8 8
Erinaceus_europaeus_69   (Western European hedgehog)   5 5
Procavia_capensis_69_1   (Cape rock hyrax)   10 10
Loxodonta_africana_69_3   (African savanna elephant)   13 13
Echinops_telfairi_69   (Small Madagascar hedgehog)   8 8
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   10 10
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   9 8
Macropus_eugenii_69_1.0   (Tammar wallaby)   10 9
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   10 10
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   13 13
Ornithorhynchus_anatinus_69_5   (Platypus)   5 5
Petromyzon_marinus_69_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_69_2   (Turkey)   10 10
Gallus_gallus_69_2   (Chicken)   10 10
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   8 8
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   10 10
Anolis_carolinensis_69_2.0   (Green anole)   9 9
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   11 11
Latimeria_chalumnae_69_1   (Coelacanth)   10 10
Gadus_morhua_69_1   (Atlantic cod)   11 11
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   11 11
Takifugu_rubripes_69_4   (Torafugu)   13 13
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   11 11
Oryzias_latipes_69_1   (Japanese medaka)   9 9
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   12 12
Oreochromis_niloticus_69_1.0   (Nile tilapia)   14 14
Danio_rerio_69_9   (Zebrafish)   17 17
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_69   (Vase tunicate)   4 4
Drosophila_melanogaster_69_5   (Fruit fly)   2 2
Caenorhabditis_elegans_69_215   (Roundworm)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   67 67
Homo_sapiens__(NCBI_version)   (Human)   29 29
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   18 18
Loa_loa_v3.3_(Request)   (Eye worm)   2 2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2 1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2 1
PDB_chains_(SCOP_1.75)_(PDB) 29 29
NCBI_viral_sequences_(Viral) 34 34
UniProt__viral_sequences_(Viral) 81 81
STRING_v9.0.5_(STRING) 399 399
Protein_Data_Bank_(all_PDB_sequenc) 503 503
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 802 802
Uniprot_2018_03_genome 3727 3700
NCBI_2017_08_genome 6548 6533
TargetDB__(Targets) 26 26

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