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Domain combinations for Leukocidin-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Leukocidin-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Aspergillus_zonatus_v1.0 8 6
Segniliparus_rotundus_DSM_44985 2 2
Tsukamurella_paurometabola_DSM_20162 3 3
Gordonia_sp._KTR9 4 4
Gordonia_polyisoprenivorans_VH2 1 1
Gordonia_bronchialis_DSM_43247 2 2
Rhodococcus_jostii_RHA1 4 4
Rhodococcus_equi_103S 1 1
Rhodococcus_opacus_B4 2 2
Rhodococcus_erythropolis_PR4 3 3
Nocardia_farcinica_IFM_10152 1 1
Mycobacterium_massiliense_str._GO_06 2 2
Mycobacterium_abscessus_ATCC_19977 8 8
Mycobacterium_sp._JLS 4 4
Mycobacterium_intracellulare_ATCC_13950 1 1
Mycobacterium_avium_104 1 1
Mycobacterium_vanbaalenii_PYR-1 7 7
Mycobacterium_rhodesiae_NBB3 3 3
Mycobacterium_ulcerans_Agy99 1 1
Mycobacterium_gilvum_PYR-GCK 4 4
Mycobacterium_chubuense_NBB4 10 10
Mycobacterium_marinum_M 1 1
Mycobacterium_smegmatis_str._MC2_155 4 4
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Staphylococcus_pseudintermedius_HKU10-03 2 2
Staphylococcus_aureus_subsp._aureus_JH1 8 8
Staphylococcus_aureus 6 6
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_sp._Ex25 2 2
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_anguillarum_775 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Vibrio_cholerae_O395 1 1
Hahella_chejuensis_KCTC_2396 1 1

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Strains
Genome     Number   Proteins
Rhodococcus_pyridinivorans_SB3094 4 3
Rhodococcus_erythropolis_CCM2595 3 3
Nocardia_brasiliensis_ATCC_700358 7 6
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 10 10
Mycobacterium_liflandii_128FXT 1 1
Mycobacterium_sp._KMS 3 3
Mycobacterium_sp._MCS 3 3
Mycobacterium_yongonense_05-1390 1 1
Mycobacterium_intracellulare_MOTT-64 1 1
Mycobacterium_indicus_pranii_MTCC_9506 1 1
Mycobacterium_intracellulare_MOTT-02 1 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1 1
Mycobacterium_gilvum_Spyr1 4 4
Mycobacterium_smegmatis_str._MC2_155 4 4
Mycobacterium_kansasii_ATCC_12478 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Clostridium_botulinum_BKT015925 1 1
Clostridium_botulinum_Ba4_str._657 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1
Bacillus_thuringiensis_HD-789 3 3
Bacillus_thuringiensis_MC28 1 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 2 2
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_Bt407 2 2
Bacillus_thuringiensis_serovar_konkukian_str._97-27 2 2
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_BMB171 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 2 2
Bacillus_cereus_FRI-35 1 1
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH820 2 2
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_F837/76 1 1
Bacillus_cereus_E33L 2 2
Bacillus_cereus_ATCC_14579 2 2
Bacillus_cereus_ATCC_10987 1 1
Bacillus_anthracis_str._H9401 2 2
Bacillus_anthracis_str._CDC_684 2 2
Staphylococcus_aureus_subsp._aureus_MSHR1132 7 7
Staphylococcus_pseudintermedius_ED99 2 2
Staphylococcus_aureus_CA-347 6 6
Staphylococcus_aureus_Bmb9393 8 8
Staphylococcus_aureus_M1 8 8
Staphylococcus_aureus_08BA02176 6 6
Staphylococcus_aureus_ST228/18412 6 6
Staphylococcus_aureus_ST228/18341 6 6
Staphylococcus_aureus_ST228/16125 6 6
Staphylococcus_aureus_ST228/16035 6 6
Staphylococcus_aureus_ST228/15532 6 6
Staphylococcus_aureus_ST228/10497 6 6
Staphylococcus_aureus_ST228/10388 6 6
Staphylococcus_aureus_04-02981 8 8
Staphylococcus_aureus_RF122 10 10
Staphylococcus_aureus_subsp._aureus_Z172 8 8
Staphylococcus_aureus_subsp._aureus_6850 8 8
Staphylococcus_aureus_subsp._aureus_SA957 8 8
Staphylococcus_aureus_subsp._aureus_CN1 8 8
Staphylococcus_aureus_subsp._aureus_SA40 6 6
Staphylococcus_aureus_subsp._aureus_11819-97 10 10
Staphylococcus_aureus_subsp._aureus_M013 8 8
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 6 6
Staphylococcus_aureus_subsp._aureus_VC40 8 8
Staphylococcus_aureus_subsp._aureus_T0131 8 8
Staphylococcus_aureus_subsp._aureus_LGA251 6 6
Staphylococcus_aureus_subsp._aureus_ECT-R_2 8 8
Staphylococcus_aureus_subsp._aureus_JKD6159 10 10
Staphylococcus_aureus_subsp._aureus_ED133 9 9
Staphylococcus_aureus_subsp._aureus_ED98 8 8
Staphylococcus_aureus_subsp._aureus_TW20 8 8
Staphylococcus_aureus_subsp._aureus_55/2053 8 8
Staphylococcus_aureus_subsp._aureus_TCH60 8 8
Staphylococcus_aureus_subsp._aureus_str._JKD6008 6 6
Staphylococcus_aureus_subsp._aureus_71193 6 6
Staphylococcus_aureus_subsp._aureus_S0385 6 6
Staphylococcus_aureus_subsp._aureus_str._Newman 8 8
Staphylococcus_aureus_subsp._aureus_Mu3 8 8
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 10 10
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 10 10
Staphylococcus_aureus_subsp._aureus_JH9 8 8
Staphylococcus_aureus_subsp._aureus_MSSA476 8 8
Staphylococcus_aureus_subsp._aureus_MRSA252 5 5
Staphylococcus_aureus_subsp._aureus_MW2 10 10
Staphylococcus_aureus_subsp._aureus_N315 8 8
Staphylococcus_aureus_subsp._aureus_Mu50 8 8
Staphylococcus_aureus_subsp._aureus_COL 8 8
Staphylococcus_aureus_subsp._aureus_NCTC_8325 8 8
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1 1
Vibrio_vulnificus_CMCP6 1 1
Vibrio_vulnificus_YJ016 1 1
Vibrio_cholerae_LMA3984-4 1 1
Vibrio_cholerae_M66-2 1 1
Vibrio_cholerae_O395 1 1
Vibrio_cholerae_IEC224 1 1
Vibrio_cholerae_O1_str._2010EL-1786 1 1
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1 1

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Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 9 9
TargetDB__(Targets) 7 7
UniProt__viral_sequences_(Viral) 15 15
NCBI_viral_sequences_(Viral) 19 19
Protein_Data_Bank_(all_PDB_sequenc) 194 194
STRING_v9.0.5_(STRING) 205 205
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 503 503
Uniprot_2018_03_genome 2926 2907
NCBI_2017_08_genome 81862 81820
PDB_chains_(SCOP_1.75)_(PDB) 5 5

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