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Domain combinations for Serine protease inhibitors superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Serine protease inhibitors domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   96 29
Pan_troglodytes_76_2.1.4   (Chimpanzee)   32 7
Gorilla_gorilla_76_3.1   (Western gorilla)   62 18
Pongo_abelii_76_2   (Sumatran orangutan)   41 14
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   22 8
Papio_anubis_76   (Olive baboon)   52 13
Macaca_mulatta_76_1   (Rhesus monkey)   59 21
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   111 35
Otolemur_garnettii_76_3   (Small-eared galago)   41 12
Microcebus_murinus_76_1   (Gray mouse lemur)   19 10
Rattus_norvegicus_76_5.0   (Norway rat)   61 16
Mus_musculus_76_38   (House mouse)   172 34
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   22 10
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   75 13
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   37 14
Cavia_porcellus_76_3   (Domestic guinea pig)   57 16
Oryctolagus_cuniculus_76_2   (Rabbit)   51 14
Ochotona_princeps_76   (American pika)   26 12
Tupaia_belangeri_76   (Northern tree shrew)   16 6
Sus_scrofa_76_10.2   (Pig)   45 17
Bos_taurus_76_3.1   (Cattle)   57 16
Ovis_aries_76_3.1   (Sheep)   35 14
Vicugna_pacos_76_1   (Alpaca)   6 4
Tursiops_truncatus_76_1   (Bottlenose dolphin)   35 13
Mustela_putorius_furo_76_1.0   (Domestic ferret)   58 15
Ailuropoda_melanoleuca_76_1   (Giant panda)   62 16
Canis_familiaris_76_3.1   (Dog)   72 17
Felis_catus_76_6.2   (Domestic cat)   61 16
Equus_caballus_76_2   (Horse)   81 17
Myotis_lucifugus_76_2.0   (Little brown bat)   35 13
Pteropus_vampyrus_76_1   (Large flying fox)   33 13
Sorex_araneus_76_1   (European shrew)   9 4
Erinaceus_europaeus_76   (Western European hedgehog)   11 5
Procavia_capensis_76_1   (Cape rock hyrax)   24 10
Loxodonta_africana_76_3   (African savanna elephant)   50 19
Echinops_telfairi_76   (Small Madagascar hedgehog)   9 4
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   54 15
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8 4
Macropus_eugenii_76_1.0   (Tammar wallaby)   22 10
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   62 20
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   53 14
Ornithorhynchus_anatinus_76_5   (Platypus)   41 26
Saccoglossus_kowalevskii_v3.0 135 62
Petromyzon_marinus_76_7.0   (Sea lamprey)   65 16
Meleagris_gallopavo_76_2   (Turkey)   59 22
Gallus_gallus_76_4   (Chicken)   62 15
Anas_platyrhynchos_76_1.0   (Mallard)   47 17
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   55 22
Ficedula_albicollis_76_1.0   (Collared flycatcher)   48 16
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   95 26
Anolis_carolinensis_76_2.0   (Green anole)   99 23
Xenopus_laevis_   (African clawed frog)   50 24
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   172 69
Latimeria_chalumnae_76_1   (Coelacanth)   84 23
Lepisosteus_oculatus_76   (Spotted gar)   118 30
Gadus_morhua_76_1   (Atlantic cod)   64 18
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   47 20
Takifugu_rubripes_76_4   (Torafugu)   116 42
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   103 38
Oryzias_latipes_76_1   (Japanese medaka)   68 22
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   53 14
Poecilia_formosa_76   (Amazon molly)   69 21
Oreochromis_niloticus_76_1.0   (Nile tilapia)   99 27
Astyanax_mexicanus_76   (Mexican tetra)   56 15
Danio_rerio_76_9   (Zebrafish)   117 41
Oikopleura_dioica 53 24
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   65 30
Ciona_intestinalis_76   (Vase tunicate)   39 19
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   68 29
Adineta_vaga 45 23
Octopus_bimaculoides_280 59 36
Crassostrea_gigas_22   (Pacific oyster)   25 12
Lottia_gigantea_   (Owl limpet)   7 7
Helobdella_robusta_ 5 3
Capitella_sp._I_ 39 27
Danaus_plexippus_OGS1.0   (Monarch butterfly)   38 16
Heliconius_melpomene_   (Postman butterfly)   27 14
Bombyx_mori_   (Domestic silkworm)   48 23
Nasonia_vitripennis_   (Jewel wasp)   11 7
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   13 9
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   8 4
Linepithema_humile_v1.1   (Argentine ant)   8 6
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   8 4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4 4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   6 3
Atta_cephalotes_v1.1 6 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   6 2
Lucilia_cuprina   (Australian sheep blowfly)   14 7
Drosophila_grimshawi_1.3 6 3
Drosophila_willistoni_1.3 10 4
Drosophila_pseudoobscura_2.13 17 10
Drosophila_persimilis_1.3 11 6
Drosophila_suzukii 10 6
Drosophila_yakuba_1.3 9 6
Drosophila_simulans_1.3 4 4
Drosophila_sechellia_1.3 8 5
Drosophila_melanogaster_76_5   (Fruit fly)   15 9
Drosophila_erecta_1.3 8 5
Drosophila_ananassae_1.3 7 4
Drosophila_virilis_1.2 6 3
Drosophila_mojavensis_1.3 7 4
Megaselia_scalaris_22 4 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   27 23
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   26 17
Anopheles_darlingi_22   (American malaria mosquito)   11 5
Anopheles_gambiae_49_3j   (African malaria mosquito)   31 27
Tribolium_castaneum_3.0   (Red flour beetle)   9 3
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   5 1
Acyrthosiphon_pisum_   (Pea aphid)   5 1
Rhodnius_prolixus_22 5 1
Daphnia_pulex_   (Common water flea)   5 2
Strigamia_maritima_22 6 2
Sarcoptes_scabiei 43 19
Tetranychus_urticae_   (Two-spotted spider mite)   20 11
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   52 39
Pristionchus_pacificus_ 53 29
Meloidogyne_incognita_   (Southern root-knot nematode)   10 8
Meloidogyne_hapla_ 13 10
Onchocerca_volvulus_22 13 8
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   10 5
Caenorhabditis_japonica_ 26 14
Caenorhabditis_brenneri_ 64 36
Caenorhabditis_remanei_ 41 22
Caenorhabditis_elegans_76_235   (Roundworm)   94 37
Caenorhabditis_briggsae_2 52 28
Trichinella_spiralis_22 12 7
Schistosoma_mansoni_ 1 1
Mnemiopsis_leidyi   (Sea walnut)   32 18
Acropora_digitifera_v1.0 4 4
Nematostella_vectensis_1.0   (Starlet sea anemone)   6 4
Hydra_vulgaris 14 7
Amphimedon_queenslandica 17 10
Trichoplax_adhaerens_ 3 1
Aspergillus_acidus_v1.0 2 2
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_flavus_NRRL3357_ 1 1
Aureococcus_anophagefferens_ 1 1
Emiliania_huxleyi_CCMP1516_ 2 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   162 56
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   9 6
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   32 29
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   35 16
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   72 29

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   48 12
Pan_troglodytes_69_2.1.4   (Chimpanzee)   32 7
Gorilla_gorilla_69_3.1   (Western gorilla)   45 12
Pongo_abelii_69_2   (Sumatran orangutan)   41 14
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   22 8
Macaca_mulatta_69_1   (Rhesus monkey)   43 15
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   44 12
Otolemur_garnettii_69_3   (Small-eared galago)   41 12
Microcebus_murinus_69_1   (Gray mouse lemur)   19 10
Rattus_norvegicus_69_3.4   (Norway rat)   53 12
Mus_musculus_69_38   (House mouse)   90 16
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   22 10
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   43 10
Cavia_porcellus_69_3   (Domestic guinea pig)   57 16
Oryctolagus_cuniculus_69_2   (Rabbit)   43 12
Ochotona_princeps_69   (American pika)   26 12
Tupaia_belangeri_69   (Northern tree shrew)   16 6
Sus_scrofa_69_10.2   (Pig)   31 10
Bos_taurus_69_3.1   (Cattle)   50 12
Vicugna_pacos_69_1   (Alpaca)   6 4
Tursiops_truncatus_69_1   (Bottlenose dolphin)   35 13
Mustela_putorius_furo_69_1.0   (Domestic ferret)   57 14
Ailuropoda_melanoleuca_69_1   (Giant panda)   61 15
Canis_familiaris_69_3.1   (Dog)   51 13
Felis_catus_69   (Domestic cat)   31 14
Equus_caballus_69_2   (Horse)   51 13
Myotis_lucifugus_69_2.0   (Little brown bat)   33 11
Pteropus_vampyrus_69_1   (Large flying fox)   33 13
Sorex_araneus_69_1   (European shrew)   9 4
Erinaceus_europaeus_69   (Western European hedgehog)   11 5
Procavia_capensis_69_1   (Cape rock hyrax)   24 10
Loxodonta_africana_69_3   (African savanna elephant)   40 15
Echinops_telfairi_69   (Small Madagascar hedgehog)   9 4
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   10 6
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8 4
Macropus_eugenii_69_1.0   (Tammar wallaby)   22 10
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   51 15
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   52 13
Ornithorhynchus_anatinus_69_5   (Platypus)   39 24
Petromyzon_marinus_69_7.0   (Sea lamprey)   49 14
Meleagris_gallopavo_69_2   (Turkey)   49 17
Gallus_gallus_69_2   (Chicken)   49 13
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   40 16
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   76 21
Anolis_carolinensis_69_2.0   (Green anole)   95 21
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   155 57
Latimeria_chalumnae_69_1   (Coelacanth)   66 18
Gadus_morhua_69_1   (Atlantic cod)   56 15
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   41 16
Takifugu_rubripes_69_4   (Torafugu)   47 15
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   75 23
Oryzias_latipes_69_1   (Japanese medaka)   50 15
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   53 14
Oreochromis_niloticus_69_1.0   (Nile tilapia)   78 20
Danio_rerio_69_9   (Zebrafish)   70 21
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   41 19
Ciona_intestinalis_69   (Vase tunicate)   39 19
Drosophila_melanogaster_69_5   (Fruit fly)   10 7
Caenorhabditis_elegans_69_215   (Roundworm)   39 21

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   101 31
Homo_sapiens__(NCBI_version)   (Human)   79 19
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   87 15
Heliconius_numata__(Incomplete) 16 15
Loa_loa_v3.3_(Request)   (Eye worm)   8 3
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   10 4
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   6 3
PDB_chains_(SCOP_1.75)_(PDB) 6 6
UniProt__viral_sequences_(Viral) 8 8
Protein_Data_Bank_(all_PDB_sequenc) 15 15
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 34 34
STRING_v9.0.5_(STRING) 2138 876
Uniprot_2018_03_genome 16723 7229
NCBI_viral_sequences_(Viral) 9 9
NCBI_2017_08_genome 20744 6687
TargetDB__(Targets) 38 20

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