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Domain combinations for B-box zinc-binding domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a B-box zinc-binding domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   399 398
Pan_troglodytes_76_2.1.4   (Chimpanzee)   76 76
Gorilla_gorilla_76_3.1   (Western gorilla)   121 121
Pongo_abelii_76_2   (Sumatran orangutan)   76 75
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   71 70
Papio_anubis_76   (Olive baboon)   72 72
Macaca_mulatta_76_1   (Rhesus monkey)   161 160
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   158 157
Otolemur_garnettii_76_3   (Small-eared galago)   64 64
Microcebus_murinus_76_1   (Gray mouse lemur)   49 48
Rattus_norvegicus_76_5.0   (Norway rat)   59 59
Mus_musculus_76_38   (House mouse)   170 170
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   53 53
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   62 62
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   51 51
Cavia_porcellus_76_3   (Domestic guinea pig)   59 59
Oryctolagus_cuniculus_76_2   (Rabbit)   69 68
Ochotona_princeps_76   (American pika)   49 49
Tupaia_belangeri_76   (Northern tree shrew)   42 42
Sus_scrofa_76_10.2   (Pig)   115 114
Bos_taurus_76_3.1   (Cattle)   77 76
Ovis_aries_76_3.1   (Sheep)   80 80
Vicugna_pacos_76_1   (Alpaca)   27 27
Tursiops_truncatus_76_1   (Bottlenose dolphin)   43 43
Mustela_putorius_furo_76_1.0   (Domestic ferret)   58 58
Ailuropoda_melanoleuca_76_1   (Giant panda)   65 65
Canis_familiaris_76_3.1   (Dog)   72 71
Felis_catus_76_6.2   (Domestic cat)   66 66
Equus_caballus_76_2   (Horse)   62 60
Myotis_lucifugus_76_2.0   (Little brown bat)   75 73
Pteropus_vampyrus_76_1   (Large flying fox)   53 53
Sorex_araneus_76_1   (European shrew)   46 46
Erinaceus_europaeus_76   (Western European hedgehog)   50 50
Procavia_capensis_76_1   (Cape rock hyrax)   47 46
Loxodonta_africana_76_3   (African savanna elephant)   117 117
Echinops_telfairi_76   (Small Madagascar hedgehog)   45 44
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   89 87
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   35 35
Macropus_eugenii_76_1.0   (Tammar wallaby)   42 42
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   103 101
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   108 108
Ornithorhynchus_anatinus_76_5   (Platypus)   68 68
Saccoglossus_kowalevskii_v3.0 174 173
Petromyzon_marinus_76_7.0   (Sea lamprey)   18 18
Meleagris_gallopavo_76_2   (Turkey)   38 37
Gallus_gallus_76_4   (Chicken)   41 41
Anas_platyrhynchos_76_1.0   (Mallard)   37 37
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   33 33
Ficedula_albicollis_76_1.0   (Collared flycatcher)   39 39
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   130 130
Anolis_carolinensis_76_2.0   (Green anole)   86 84
Xenopus_laevis_   (African clawed frog)   99 99
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   168 164
Latimeria_chalumnae_76_1   (Coelacanth)   139 137
Lepisosteus_oculatus_76   (Spotted gar)   129 127
Gadus_morhua_76_1   (Atlantic cod)   139 137
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   78 78
Takifugu_rubripes_76_4   (Torafugu)   309 309
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   196 195
Oryzias_latipes_76_1   (Japanese medaka)   118 118
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   93 92
Poecilia_formosa_76   (Amazon molly)   170 167
Oreochromis_niloticus_76_1.0   (Nile tilapia)   227 224
Astyanax_mexicanus_76   (Mexican tetra)   137 135
Danio_rerio_76_9   (Zebrafish)   289 288
Oikopleura_dioica 8 8
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   16 16
Ciona_intestinalis_76   (Vase tunicate)   10 10
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   351 343
Adineta_vaga 27 27
Octopus_bimaculoides_280 31 31
Crassostrea_gigas_22   (Pacific oyster)   570 564
Lottia_gigantea_   (Owl limpet)   52 52
Helobdella_robusta_ 35 35
Capitella_sp._I_ 28 28
Danaus_plexippus_OGS1.0   (Monarch butterfly)   9 9
Heliconius_melpomene_   (Postman butterfly)   8 8
Bombyx_mori_   (Domestic silkworm)   6 6
Nasonia_vitripennis_   (Jewel wasp)   9 9
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   19 19
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   12 12
Linepithema_humile_v1.1   (Argentine ant)   10 10
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   9 9
Solenopsis_invicta_v.2.2.3   (Red fire ant)   10 10
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   9 9
Atta_cephalotes_v1.1 10 10
Camponotus_floridanus_v3.3   (Florida carpenter ant)   11 11
Lucilia_cuprina   (Australian sheep blowfly)   9 9
Drosophila_grimshawi_1.3 9 9
Drosophila_willistoni_1.3 8 8
Drosophila_pseudoobscura_2.13 7 7
Drosophila_persimilis_1.3 8 8
Drosophila_suzukii 6 6
Drosophila_yakuba_1.3 8 8
Drosophila_simulans_1.3 8 8
Drosophila_sechellia_1.3 9 9
Drosophila_melanogaster_76_5   (Fruit fly)   26 26
Drosophila_erecta_1.3 9 9
Drosophila_ananassae_1.3 8 8
Drosophila_virilis_1.2 9 9
Drosophila_mojavensis_1.3 7 7
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   18 18
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   24 24
Anopheles_darlingi_22   (American malaria mosquito)   8 8
Anopheles_gambiae_49_3j   (African malaria mosquito)   10 10
Tribolium_castaneum_3.0   (Red flour beetle)   10 10
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   9 9
Acyrthosiphon_pisum_   (Pea aphid)   7 7
Rhodnius_prolixus_22 6 6
Daphnia_pulex_   (Common water flea)   7 7
Strigamia_maritima_22 14 14
Sarcoptes_scabiei 2 2
Tetranychus_urticae_   (Two-spotted spider mite)   3 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   7 7
Pristionchus_pacificus_ 4 4
Meloidogyne_incognita_   (Southern root-knot nematode)   6 6
Meloidogyne_hapla_ 4 4
Onchocerca_volvulus_22 7 7
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   12 12
Caenorhabditis_japonica_ 7 7
Caenorhabditis_brenneri_ 35 31
Caenorhabditis_remanei_ 17 16
Caenorhabditis_elegans_76_235   (Roundworm)   23 23
Caenorhabditis_briggsae_2 8 8
Trichinella_spiralis_22 3 3
Hymenolepis_microstoma_ 7 7
Echinococcus_multilocularis_ 7 7
Echinococcus_granulosus_ 7 7
Taenia_solium_   (Pork tapeworm)   7 7
Schistosoma_mansoni_ 10 10
Mnemiopsis_leidyi   (Sea walnut)   12 12
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 85 78
Nematostella_vectensis_1.0   (Starlet sea anemone)   85 85
Hydra_vulgaris 10 10
Amphimedon_queenslandica 254 252
Trichoplax_adhaerens_ 6 6
Proterospongia_sp._ATCC_50818_ 2 2
Sphaeroforma_arctica_JP610_ 1 1
Capsaspora_owczarzaki_ATCC_30864_ 2 1
Conidiobolus_coronatus_NRRL28638_v1.0 1 1
Mortierella_verticillata_NRRL_6337_ 1 1
Phycomyces_blakesleeanus_ 1 1
Mucor_circinelloides_ 1 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 20 20
Pisolithus_tinctorius_Marx_270_v1.0 2 2
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 1 1
Amanita_thiersii_Skay4041_v1.0 1 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Hebeloma_cylindrosporum_h7_v2.0 1 1
Schizophyllum_commune_ 1 1
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 2 2
Postia_placenta_ 1 1
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Dichomitus_squalens 1 1
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 1 1
Apiospora_montagnei_NRRL_25634_v1.0 1 1
Magnaporthe_poae_ATCC_64411_22 1 1
Magnaporthe_grisea_70-15_ 1 1
Podospora_anserina_ 1 1
Thielavia_terrestris_NRRL_8126_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_albo-atrum_VaMs.102_ 1 1
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 1 1
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 1 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1 1
Fusarium_verticillioides_7600_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 1 1
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Alternaria_brassicicola_ 1 1
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 1 1
Stagonospora_nodorum_ 1 1
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 1 1
Dothistroma_septosporum 1 1
Septoria_musiva_v1.0 1 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 1 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Candida_glabrata_CBS138 1 1
Catenaria_anguillulae_PL171_v1.0 4 4
Allomyces_macrogynus_ATCC_38327_ 6 6
Spizellomyces_punctatus_DAOM_BR117_ 4 4
Dictyostelium_discoideum 79 77
Dictyostelium_purpureum_ 50 49
Entamoeba_dispar_1.2 1 1
Entamoeba_invadens_1.2 2 2
Entamoeba_histolytica_1 2 2
Selaginella_moellendorffii_ 9 9
Pinus_taeda   (Loblolly pine)   3 3
Picea_abies   (Norway spruce)   3 3
Eucalyptus_grandis_v201   (Rose gum)   10 10
Theobroma_cacao_B97-61/B2_v1   (Cacao)   6 6
Gossypium_raimondii_v221 13 13
Citrus_clementina_v165 11 11
Citrus_sinensis_v154   (Sweet orange)   6 6
Thellungiella_halophila_v173 6 6
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8 8
Capsella_rubella_v183 2 2
Arabidopsis_lyrata_   (Lyrate rockcress)   2 2
Arabidopsis_thaliana_10   (Thale cress)   2 2
Carica_papaya_   (Papaya)   7 7
Medicago_truncatula_   (Barrel medic)   9 9
Phaseolus_vulgaris_v186   (French bean)   7 7
Glycine_max_v109   (Soybean)   15 15
Cucumis_sativus_v122   (Cucumber)   4 4
Fragaria_vesca_   (Wild strawberry)   5 5
Malus_domestica_v196   (Apple)   1 1
Prunus_persica_v139   (Peach)   3 3
Linum_usitatissimum_v200   (Flax)   6 6
Manihot_esculenta_v147   (Cassava)   5 5
Populus_trichocarpa_v156   (Black cottonwood)   9 9
Vitis_vinifera_   (Wine grape)   4 4
Mimulus_guttatus_v140   (Spotted monkey flower)   3 3
Solanum_lycopersicum_v.2.3   (Tomato)   14 14
Solanum_tuberosum_   (Potato)   6 6
Actinidia_chinensis_Hongyang_ 5 5
Aquilegia_coerulea_v195 6 6
Triticum_urartu_22 1 1
Triticum_aestivum_22   (Bread wheat)   1 1
Oryza_barthii_22   (African wild rice)   1 1
Oryza_meridionalis_22 1 1
Oryza_glumaepatula_22 3 3
Oryza_punctata_22 1 1
Oryza_nivara_22 1 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1 1
Oryza_sativa_v193   (Rice)   1 1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2 2
Panicum_virgatum_v202   (Switchgrass)   2 2
Setaria_italica_v164   (Foxtail millet)   3 3
Musa_balbisiana   (Balbis banana)   3 3
Musa_acuminata_22   (Wild Malaysian banana)   3 3
Physcomitrella_patens 8 8
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Thecamonas_trahens_ATCC_50062_ 8 8
Giardia_lamblia_2.3 2 2
Cyanophora_paradoxa_ 6 6
Leishmania_mexicana_2.4 4 4
Leishmania_major_strain_Friedlin_ 5 5
Leishmania_infantum_JPCM5_2.4 5 5
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 5 5
Trypanosoma_vivax_ 4 4
Trypanosoma_cruzi_strain_CL_Brener 5 5
Trypanosoma_congolense_2.4 4 4
Trypanosoma_brucei_gambiense_v4.1 4 3
Trypanosoma_brucei_TREU927_v4.1 4 3
Ectocarpus_siliculosus 4 4
Albugo_laibachii_22 1 1
Pythium_iwayamai_DAOM_BR242034_22 5 5
Pythium_arrhenomanes_ATCC_12531_22 2 2
Pythium_ultimum_v1.7-2 3 3
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 4 4
Pythium_vexans_DAOM_BR484_22 3 3
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2 2
Phytophthora_sojae_1.1 4 4
Phytophthora_infestans_T30-4_ 4 4
Phytophthora_capsici_ 3 3
Hyaloperonospora_arabidopsidis_22 2 2
Perkinsus_marinus_ATCC_50983_ 2 2
Paramecium_tetraurelia_ 66 66
Tetrahymena_thermophila_SB210_1_ 52 52
Ichthyophthirius_multifiliis_strain_G5_ 10 10
Cryptosporidium_hominis 3 3
Cryptosporidium_muris 4 4
Cryptosporidium_parvum_Iowa_II 4 4
Neospora_caninum 5 5
Toxoplasma_gondii_VEG 4 4
Toxoplasma_gondii_ME49 4 4
Toxoplasma_gondii_GT1 3 3
Babesia_bovis_T2Bo_ 8 8
Theileria_parva__ 3 3
Theileria_annulata 3 3
Plasmodium_falciparum_3D7_ 3 3
Plasmodium_vivax_SaI-1_7.0 4 4
Plasmodium_knowlesi_strain_H_ 4 4
Plasmodium_yoelii_ssp._yoelii_1_ 3 3
Plasmodium_chabaudi_ 3 3
Plasmodium_berghei_ANKA_ 3 3
Symbiodinium_minutum_clade_B1_v1.2 6 6
Naegleria_gruberi_ 11 11
Trichomonas_vaginalis_ 18 18
Guillardia_theta_CCMP2712_v1.0_ 2 2
Emiliania_huxleyi_CCMP1516_ 1 1
Thermobaculum_terrenum_ATCC_BAA-798 1 1
Rubrobacter_xylanophilus_DSM_9941 1 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1 1
Thermomonospora_curvata_DSM_43183 1 1
Streptomyces_flavogriseus_ATCC_33331 1 1
Streptomyces_sp._SirexAA-E 1 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1 1
Saccharomonospora_viridis_DSM_43017 1 1
Nocardioides_sp._JS614 1 1
Gordonia_bronchialis_DSM_43247 1 1
Rhodococcus_equi_103S 1 1
Nocardia_farcinica_IFM_10152 1 1
Mycobacterium_sp._JLS 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_rhodesiae_NBB3 1 1
Mycobacterium_gilvum_PYR-GCK 1 1
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_marinum_M 1 1
Beutenbergia_cavernae_DSM_12333 1 1
Intrasporangium_calvum_DSM_43043 1 1
Xylanimonas_cellulosilytica_DSM_15894 1 1
Arthrobacter_phenanthrenivorans_Sphe3 1 1
Arthrobacter_sp._FB24 1 1
Thermomicrobium_roseum_DSM_5159 1 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Roseiflexus_sp._RS-1 1 1
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aggregans_DSM_9485 1 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Sulfobacillus_acidophilus_DSM_10332 2 2
Syntrophothermus_lipocalidus_DSM_12680 1 1
Coraliomargarita_akajimensis_DSM_45221 1 1
Candidatus_Solibacter_usitatus_Ellin6076 1 1
Candidatus_Koribacter_versatilis_Ellin345 1 1
Acidobacterium_capsulatum_ATCC_51196 1 1
Desulfomonile_tiedjei_DSM_6799 1 1
Myxococcus_xanthus_DK_1622 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   212 190
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   20 20
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   11 11
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   5 5
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   20 20
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H143 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Batrachochytrium_dendrobatidis_JEL423_ 2 2
Batrachochytrium_dendrobatidis_JAM81_ 2 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4 4
Hordeum_vulgare_22   (Domesticated barley)   1 1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1 1
Trypanosoma_brucei_Lister_427_v4.1 4 3
Neospora_caninum_Nc-Liverpool_6.2 5 5
Plasmodium_falciparum_HB3_ 3 3
Plasmodium_falciparum_Dd2_ 3 3
Streptomyces_davawensis_JCM_4913 1 1
Streptomyces_fulvissimus_DSM_40593 1 1
Streptomyces_venezuelae_ATCC_10712 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1 1
Saccharothrix_espanaensis_DSM_44229 1 1
Rhodococcus_pyridinivorans_SB3094 1 1
Mycobacterium_sp._KMS 1 1
Mycobacterium_sp._MCS 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_gilvum_Spyr1 1 1
Mycobacterium_kansasii_ATCC_12478 1 1
Actinomyces_viscosus_C505 1 1
Sulfobacillus_acidophilus_TPY 2 2
Myxococcus_stipitatus_DSM_14675 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   152 150
Pan_troglodytes_69_2.1.4   (Chimpanzee)   70 70
Gorilla_gorilla_69_3.1   (Western gorilla)   80 80
Pongo_abelii_69_2   (Sumatran orangutan)   74 73
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   68 67
Macaca_mulatta_69_1   (Rhesus monkey)   74 73
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   80 79
Otolemur_garnettii_69_3   (Small-eared galago)   64 64
Microcebus_murinus_69_1   (Gray mouse lemur)   49 48
Rattus_norvegicus_69_3.4   (Norway rat)   61 61
Mus_musculus_69_38   (House mouse)   74 74
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   53 53
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   58 58
Cavia_porcellus_69_3   (Domestic guinea pig)   57 57
Oryctolagus_cuniculus_69_2   (Rabbit)   65 64
Ochotona_princeps_69   (American pika)   49 49
Tupaia_belangeri_69   (Northern tree shrew)   42 42
Sus_scrofa_69_10.2   (Pig)   75 74
Bos_taurus_69_3.1   (Cattle)   71 70
Vicugna_pacos_69_1   (Alpaca)   27 27
Tursiops_truncatus_69_1   (Bottlenose dolphin)   43 43
Mustela_putorius_furo_69_1.0   (Domestic ferret)   58 58
Ailuropoda_melanoleuca_69_1   (Giant panda)   63 63
Canis_familiaris_69_3.1   (Dog)   64 63
Felis_catus_69   (Domestic cat)   46 45
Equus_caballus_69_2   (Horse)   61 59
Myotis_lucifugus_69_2.0   (Little brown bat)   74 72
Pteropus_vampyrus_69_1   (Large flying fox)   53 53
Sorex_araneus_69_1   (European shrew)   46 46
Erinaceus_europaeus_69   (Western European hedgehog)   50 50
Procavia_capensis_69_1   (Cape rock hyrax)   47 46
Loxodonta_africana_69_3   (African savanna elephant)   99 99
Echinops_telfairi_69   (Small Madagascar hedgehog)   45 44
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   34 34
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   35 35
Macropus_eugenii_69_1.0   (Tammar wallaby)   42 42
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   88 86
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   106 106
Ornithorhynchus_anatinus_69_5   (Platypus)   60 60
Petromyzon_marinus_69_7.0   (Sea lamprey)   18 18
Meleagris_gallopavo_69_2   (Turkey)   30 29
Gallus_gallus_69_2   (Chicken)   37 37
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   33 33
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   115 115
Anolis_carolinensis_69_2.0   (Green anole)   81 80
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   157 153
Latimeria_chalumnae_69_1   (Coelacanth)   124 122
Gadus_morhua_69_1   (Atlantic cod)   130 128
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   68 68
Takifugu_rubripes_69_4   (Torafugu)   72 72
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   147 146
Oryzias_latipes_69_1   (Japanese medaka)   98 98
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   89 88
Oreochromis_niloticus_69_1.0   (Nile tilapia)   201 198
Danio_rerio_69_9   (Zebrafish)   201 200
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   7 7
Ciona_intestinalis_69   (Vase tunicate)   10 10
Drosophila_melanogaster_69_5   (Fruit fly)   9 9
Caenorhabditis_elegans_69_215   (Roundworm)   19 19
Arabidopsis_thaliana_10   (Thale cress)   2 2

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   435 434
Homo_sapiens__(NCBI_version)   (Human)   125 124
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   72 72
Heliconius_numata__(Incomplete) 1 1
Loa_loa_v3.3_(Request)   (Eye worm)   5 5
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   6 6
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   5 5
Encephalitozoon_intestinalis__(endoparasite) 1 1
Encephalitozoon_cuniculi_(endoparasite) 1 1
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   1 1
Ricinus_communis__(Early_assembly)   (Castor bean)   5 5
Nicotiana_benthamiana_0.4.4_(Early_draft) 4 4
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   14 14
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   14 14
Phoenix_dactylifera__(Early_draft)   (Date palm)   2 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 47 47
Uniprot_2018_03_genome 21902 21699
TargetDB__(Targets) 86 86
NCBI_2017_08_genome 40155 39852
Protein_Data_Bank_(all_PDB_sequenc) 43 43
Protozoadb_2010_08_(Protozoadb) 149 148
PDB_chains_(SCOP_1.75)_(PDB) 7 7
STRING_v9.0.5_(STRING) 3040 3006

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