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Domain combinations for TAZ domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a TAZ domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   6 3
Pan_troglodytes_76_2.1.4   (Chimpanzee)   4 2
Gorilla_gorilla_76_3.1   (Western gorilla)   6 3
Pongo_abelii_76_2   (Sumatran orangutan)   4 2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   4 2
Papio_anubis_76   (Olive baboon)   8 4
Macaca_mulatta_76_1   (Rhesus monkey)   9 5
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   8 5
Otolemur_garnettii_76_3   (Small-eared galago)   4 2
Microcebus_murinus_76_1   (Gray mouse lemur)   3 2
Rattus_norvegicus_76_5.0   (Norway rat)   2 1
Mus_musculus_76_38   (House mouse)   4 2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2 2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   10 4
Cavia_porcellus_76_3   (Domestic guinea pig)   4 2
Oryctolagus_cuniculus_76_2   (Rabbit)   4 2
Ochotona_princeps_76   (American pika)   3 2
Tupaia_belangeri_76   (Northern tree shrew)   3 2
Sus_scrofa_76_10.2   (Pig)   7 4
Bos_taurus_76_3.1   (Cattle)   4 2
Ovis_aries_76_3.1   (Sheep)   4 2
Vicugna_pacos_76_1   (Alpaca)   2 2
Tursiops_truncatus_76_1   (Bottlenose dolphin)   4 2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   4 2
Ailuropoda_melanoleuca_76_1   (Giant panda)   6 3
Canis_familiaris_76_3.1   (Dog)   6 3
Felis_catus_76_6.2   (Domestic cat)   4 2
Equus_caballus_76_2   (Horse)   6 3
Myotis_lucifugus_76_2.0   (Little brown bat)   8 6
Pteropus_vampyrus_76_1   (Large flying fox)   4 2
Sorex_araneus_76_1   (European shrew)   3 3
Erinaceus_europaeus_76   (Western European hedgehog)   4 2
Procavia_capensis_76_1   (Cape rock hyrax)   4 2
Loxodonta_africana_76_3   (African savanna elephant)   6 3
Echinops_telfairi_76   (Small Madagascar hedgehog)   4 2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   3 2
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   4 2
Macropus_eugenii_76_1.0   (Tammar wallaby)   4 2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   6 3
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   4 2
Ornithorhynchus_anatinus_76_5   (Platypus)   6 4
Saccoglossus_kowalevskii_v3.0 5 3
Petromyzon_marinus_76_7.0   (Sea lamprey)   2 2
Meleagris_gallopavo_76_2   (Turkey)   4 2
Gallus_gallus_76_4   (Chicken)   4 2
Anas_platyrhynchos_76_1.0   (Mallard)   3 2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   4 2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   4 2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   4 2
Anolis_carolinensis_76_2.0   (Green anole)   4 2
Xenopus_laevis_   (African clawed frog)   5 3
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   4 2
Latimeria_chalumnae_76_1   (Coelacanth)   7 5
Lepisosteus_oculatus_76   (Spotted gar)   6 3
Gadus_morhua_76_1   (Atlantic cod)   7 4
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   12 7
Takifugu_rubripes_76_4   (Torafugu)   33 17
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   8 4
Oryzias_latipes_76_1   (Japanese medaka)   8 5
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   8 5
Poecilia_formosa_76   (Amazon molly)   8 4
Oreochromis_niloticus_76_1.0   (Nile tilapia)   10 5
Astyanax_mexicanus_76   (Mexican tetra)   4 3
Danio_rerio_76_9   (Zebrafish)   15 8
Oikopleura_dioica 6 6
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   3 3
Ciona_intestinalis_76   (Vase tunicate)   2 2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   3 2
Adineta_vaga 15 11
Octopus_bimaculoides_280 3 3
Crassostrea_gigas_22   (Pacific oyster)   5 4
Lottia_gigantea_   (Owl limpet)   2 1
Helobdella_robusta_ 10 8
Capitella_sp._I_ 2 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2 1
Heliconius_melpomene_   (Postman butterfly)   2 1
Bombyx_mori_   (Domestic silkworm)   1 1
Nasonia_vitripennis_   (Jewel wasp)   2 1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   5 5
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   2 1
Linepithema_humile_v1.1   (Argentine ant)   3 2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3 2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3 3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2 1
Atta_cephalotes_v1.1 2 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2 1
Drosophila_grimshawi_1.3 2 1
Drosophila_willistoni_1.3 2 1
Drosophila_pseudoobscura_2.13 2 1
Drosophila_persimilis_1.3 1 1
Drosophila_suzukii 4 3
Drosophila_yakuba_1.3 2 1
Drosophila_simulans_1.3 2 1
Drosophila_sechellia_1.3 2 1
Drosophila_melanogaster_76_5   (Fruit fly)   8 4
Drosophila_erecta_1.3 2 1
Drosophila_ananassae_1.3 3 2
Drosophila_virilis_1.2 2 1
Drosophila_mojavensis_1.3 2 1
Megaselia_scalaris_22 2 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   2 1
Anopheles_darlingi_22   (American malaria mosquito)   2 2
Anopheles_gambiae_49_3j   (African malaria mosquito)   2 1
Tribolium_castaneum_3.0   (Red flour beetle)   2 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   2 1
Acyrthosiphon_pisum_   (Pea aphid)   2 1
Daphnia_pulex_   (Common water flea)   7 5
Strigamia_maritima_22 5 3
Sarcoptes_scabiei 1 1
Tetranychus_urticae_   (Two-spotted spider mite)   3 2
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3 2
Pristionchus_pacificus_ 14 12
Meloidogyne_incognita_   (Southern root-knot nematode)   7 6
Onchocerca_volvulus_22 2 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2 1
Caenorhabditis_japonica_ 3 2
Caenorhabditis_brenneri_ 9 8
Caenorhabditis_remanei_ 6 5
Caenorhabditis_elegans_76_235   (Roundworm)   18 15
Caenorhabditis_briggsae_2 6 4
Trichinella_spiralis_22 4 3
Hymenolepis_microstoma_ 9 5
Echinococcus_multilocularis_ 4 4
Echinococcus_granulosus_ 5 4
Taenia_solium_   (Pork tapeworm)   9 8
Schistosoma_mansoni_ 4 2
Mnemiopsis_leidyi   (Sea walnut)   2 2
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 7 6
Nematostella_vectensis_1.0   (Starlet sea anemone)   2 1
Hydra_vulgaris 3 2
Amphimedon_queenslandica 11 8
Trichoplax_adhaerens_ 2 2
Proterospongia_sp._ATCC_50818_ 3 2
Monosiga_brevicollis_ 2 1
Sphaeroforma_arctica_JP610_ 5 4
Capsaspora_owczarzaki_ATCC_30864_ 2 1
Selaginella_moellendorffii_ 8 6
Pinus_taeda   (Loblolly pine)   2 2
Picea_abies   (Norway spruce)   5 4
Eucalyptus_grandis_v201   (Rose gum)   10 9
Theobroma_cacao_B97-61/B2_v1   (Cacao)   6 5
Gossypium_raimondii_v221 31 24
Citrus_clementina_v165 11 9
Citrus_sinensis_v154   (Sweet orange)   14 12
Thellungiella_halophila_v173 17 13
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   26 18
Capsella_rubella_v183 15 11
Arabidopsis_lyrata_   (Lyrate rockcress)   14 10
Arabidopsis_thaliana_10   (Thale cress)   19 13
Carica_papaya_   (Papaya)   7 6
Medicago_truncatula_   (Barrel medic)   20 18
Phaseolus_vulgaris_v186   (French bean)   10 9
Glycine_max_v109   (Soybean)   10 7
Cucumis_sativus_v122   (Cucumber)   6 5
Fragaria_vesca_   (Wild strawberry)   7 6
Malus_domestica_v196   (Apple)   15 13
Prunus_persica_v139   (Peach)   6 5
Linum_usitatissimum_v200   (Flax)   13 10
Manihot_esculenta_v147   (Cassava)   12 9
Populus_trichocarpa_v156   (Black cottonwood)   13 11
Vitis_vinifera_   (Wine grape)   5 4
Mimulus_guttatus_v140   (Spotted monkey flower)   9 7
Solanum_lycopersicum_v.2.3   (Tomato)   11 9
Solanum_tuberosum_   (Potato)   10 10
Actinidia_chinensis_Hongyang_ 9 7
Aquilegia_coerulea_v195 19 12
Triticum_urartu_22 3 2
Triticum_aestivum_22   (Bread wheat)   24 21
Aegilops_tauschii_22 8 5
Brachypodium_distachyon_   (Stiff brome)   11 9
Oryza_barthii_22   (African wild rice)   10 8
Oryza_meridionalis_22 10 7
Oryza_glumaepatula_22 11 9
Oryza_glaberrima   (African rice)   7 7
Oryza_punctata_22 9 8
Oryza_nivara_22 11 9
Oryza_brachyantha_22   (Malo sina)   7 5
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   13 13
Oryza_sativa_v193   (Rice)   13 13
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9 8
Panicum_virgatum_v202   (Switchgrass)   19 18
Setaria_italica_v164   (Foxtail millet)   10 8
Zea_mays_subsp._mays_   (Maize)   15 13
Zea_mays_v181   (Maize)   16 14
Sorghum_bicolor_   (Sorghum)   8 7
Musa_balbisiana   (Balbis banana)   13 12
Musa_acuminata_22   (Wild Malaysian banana)   18 14
Amborella_trichopoda_22 12 11
Physcomitrella_patens 7 5
Coccomyxa_subellipsoidea_sp._C-169_v2 3 2
Asterochloris_sp._Cgr/DA1pho_v1.0 3 2
Chlorella_variabilis_sp._NC64A_ 1 1
Chlorella_vulgaris_ 2 1
Volvox_carteri_f._nagariensis_ 5 4
Volvox_carteri_v199 5 4
Chlamydomonas_reinhardtii_4.0 5 4
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_lucimarinus_CCE9901_ 2 1
Ostreococcus_tauri_ 1 1
Bathycoccus_prasinos_ 2 1
Micromonas_sp._RCC299_ 2 1
Micromonas_pusilla_CCMP1545_v3.0 2 1
Ectocarpus_siliculosus 8 6
Aureococcus_anophagefferens_ 4 4
Albugo_laibachii_22 12 7
Pythium_iwayamai_DAOM_BR242034_22 11 8
Pythium_arrhenomanes_ATCC_12531_22 10 8
Pythium_ultimum_v1.7-2 8 7
Pythium_aphanidermatum_DAOM_BR444_22 10 8
Pythium_irregulare_DAOM_BR486_22 11 8
Pythium_vexans_DAOM_BR484_22 11 7
Phytophthora_ramorum_1.1   (Sudden oak death agent)   10 7
Phytophthora_sojae_1.1 9 8
Phytophthora_infestans_T30-4_ 15 12
Phytophthora_capsici_ 6 6
Hyaloperonospora_arabidopsidis_22 13 9
Phaeodactylum_tricornutumCCAP_1055/1 8 5
Fragilariopsis_cylindrus 9 7
Thalassiosira_pseudonana_CCMP1335 9 7
Emiliania_huxleyi_CCMP1516_ 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   4 2
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   6 3
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   2 1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2 2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   13 10
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   6 5
Hordeum_vulgare_22   (Domesticated barley)   31 27
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   6 4

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   4 2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   4 2
Gorilla_gorilla_69_3.1   (Western gorilla)   4 2
Pongo_abelii_69_2   (Sumatran orangutan)   4 2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   4 2
Macaca_mulatta_69_1   (Rhesus monkey)   4 2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   4 2
Otolemur_garnettii_69_3   (Small-eared galago)   4 2
Microcebus_murinus_69_1   (Gray mouse lemur)   3 2
Rattus_norvegicus_69_3.4   (Norway rat)   4 2
Mus_musculus_69_38   (House mouse)   4 2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2 2
Cavia_porcellus_69_3   (Domestic guinea pig)   4 2
Oryctolagus_cuniculus_69_2   (Rabbit)   4 2
Ochotona_princeps_69   (American pika)   3 2
Tupaia_belangeri_69   (Northern tree shrew)   3 2
Sus_scrofa_69_10.2   (Pig)   4 2
Bos_taurus_69_3.1   (Cattle)   4 2
Vicugna_pacos_69_1   (Alpaca)   2 2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   4 2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   4 2
Ailuropoda_melanoleuca_69_1   (Giant panda)   4 2
Canis_familiaris_69_3.1   (Dog)   4 2
Felis_catus_69   (Domestic cat)   3 2
Equus_caballus_69_2   (Horse)   4 2
Myotis_lucifugus_69_2.0   (Little brown bat)   8 6
Pteropus_vampyrus_69_1   (Large flying fox)   4 2
Sorex_araneus_69_1   (European shrew)   3 3
Erinaceus_europaeus_69   (Western European hedgehog)   4 2
Procavia_capensis_69_1   (Cape rock hyrax)   4 2
Loxodonta_africana_69_3   (African savanna elephant)   4 2
Echinops_telfairi_69   (Small Madagascar hedgehog)   4 2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   4 2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   4 2
Macropus_eugenii_69_1.0   (Tammar wallaby)   4 2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   4 2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   4 2
Ornithorhynchus_anatinus_69_5   (Platypus)   6 4
Petromyzon_marinus_69_7.0   (Sea lamprey)   2 2
Meleagris_gallopavo_69_2   (Turkey)   4 2
Gallus_gallus_69_2   (Chicken)   4 2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   4 2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   4 2
Anolis_carolinensis_69_2.0   (Green anole)   4 2
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   4 2
Latimeria_chalumnae_69_1   (Coelacanth)   4 3
Gadus_morhua_69_1   (Atlantic cod)   7 4
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   8 4
Takifugu_rubripes_69_4   (Torafugu)   9 5
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   8 4
Oryzias_latipes_69_1   (Japanese medaka)   7 4
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   8 5
Oreochromis_niloticus_69_1.0   (Nile tilapia)   8 4
Danio_rerio_69_9   (Zebrafish)   9 5
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_69   (Vase tunicate)   1 1
Drosophila_melanogaster_69_5   (Fruit fly)   2 1
Caenorhabditis_elegans_69_215   (Roundworm)   9 8
Arabidopsis_thaliana_10   (Thale cress)   14 10

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   6 3
Homo_sapiens__(NCBI_version)   (Human)   6 3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   4 2
Loa_loa_v3.3_(Request)   (Eye worm)   2 1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2 2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2 1
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   15 13
Ricinus_communis__(Early_assembly)   (Castor bean)   6 5
Nicotiana_benthamiana_0.4.4_(Early_draft) 20 15
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   11 9
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   11 9
Phoenix_dactylifera__(Early_draft)   (Date palm)   9 9
UniProt__viral_sequences_(Viral) 3 3
TargetDB__(Targets) 9 7
NCBI_viral_sequences_(Viral) 1 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 47 47
STRING_v9.0.5_(STRING) 325 217
Uniprot_2018_03_genome 4108 2880
NCBI_2017_08_genome 5137 3194
PDB_chains_(SCOP_1.75)_(PDB) 5 5
Protein_Data_Bank_(all_PDB_sequenc) 22 22

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