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Domain combinations for Apolipoprotein A-I superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Apolipoprotein A-I domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   10 9
Pan_troglodytes_76_2.1.4   (Chimpanzee)   6 5
Gorilla_gorilla_76_3.1   (Western gorilla)   7 6
Pongo_abelii_76_2   (Sumatran orangutan)   5 3
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   5 4
Papio_anubis_76   (Olive baboon)   4 4
Macaca_mulatta_76_1   (Rhesus monkey)   8 6
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   7 6
Otolemur_garnettii_76_3   (Small-eared galago)   5 4
Microcebus_murinus_76_1   (Gray mouse lemur)   5 4
Rattus_norvegicus_76_5.0   (Norway rat)   5 5
Mus_musculus_76_38   (House mouse)   11 11
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   4 4
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   3 3
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   5 4
Cavia_porcellus_76_3   (Domestic guinea pig)   5 5
Oryctolagus_cuniculus_76_2   (Rabbit)   5 4
Ochotona_princeps_76   (American pika)   3 3
Sus_scrofa_76_10.2   (Pig)   5 4
Bos_taurus_76_3.1   (Cattle)   5 4
Ovis_aries_76_3.1   (Sheep)   5 4
Tursiops_truncatus_76_1   (Bottlenose dolphin)   5 4
Mustela_putorius_furo_76_1.0   (Domestic ferret)   5 5
Ailuropoda_melanoleuca_76_1   (Giant panda)   4 4
Canis_familiaris_76_3.1   (Dog)   5 5
Felis_catus_76_6.2   (Domestic cat)   3 3
Equus_caballus_76_2   (Horse)   3 3
Myotis_lucifugus_76_2.0   (Little brown bat)   2 2
Pteropus_vampyrus_76_1   (Large flying fox)   4 3
Sorex_araneus_76_1   (European shrew)   3 2
Erinaceus_europaeus_76   (Western European hedgehog)   2 1
Procavia_capensis_76_1   (Cape rock hyrax)   2 2
Loxodonta_africana_76_3   (African savanna elephant)   7 6
Echinops_telfairi_76   (Small Madagascar hedgehog)   4 3
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   6 5
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_76_1.0   (Tammar wallaby)   3 3
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   9 8
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   4 3
Ornithorhynchus_anatinus_76_5   (Platypus)   6 3
Saccoglossus_kowalevskii_v3.0 23 19
Petromyzon_marinus_76_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_76_2   (Turkey)   5 4
Gallus_gallus_76_4   (Chicken)   4 3
Anas_platyrhynchos_76_1.0   (Mallard)   2 2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2 2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   6 5
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   9 6
Anolis_carolinensis_76_2.0   (Green anole)   5 4
Xenopus_laevis_   (African clawed frog)   25 16
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   9 7
Latimeria_chalumnae_76_1   (Coelacanth)   5 4
Lepisosteus_oculatus_76   (Spotted gar)   4 4
Gadus_morhua_76_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   7 7
Takifugu_rubripes_76_4   (Torafugu)   23 22
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   16 16
Oryzias_latipes_76_1   (Japanese medaka)   11 11
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   10 10
Poecilia_formosa_76   (Amazon molly)   9 9
Oreochromis_niloticus_76_1.0   (Nile tilapia)   13 13
Astyanax_mexicanus_76   (Mexican tetra)   15 13
Danio_rerio_76_9   (Zebrafish)   23 23
Oikopleura_dioica 2 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   5 5
Ciona_intestinalis_76   (Vase tunicate)   1 1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   3 3
Adineta_vaga 18 15
Octopus_bimaculoides_280 2 1
Crassostrea_gigas_22   (Pacific oyster)   20 20
Lottia_gigantea_   (Owl limpet)   14 13
Helobdella_robusta_ 3 3
Capitella_sp._I_ 6 6
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2 1
Heliconius_melpomene_   (Postman butterfly)   1 1
Bombyx_mori_   (Domestic silkworm)   4 2
Nasonia_vitripennis_   (Jewel wasp)   2 2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   6 5
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5 1
Linepithema_humile_v1.1   (Argentine ant)   3 1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   10 3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   8 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   6 1
Atta_cephalotes_v1.1 1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   4 3
Lucilia_cuprina   (Australian sheep blowfly)   4 4
Drosophila_grimshawi_1.3 1 1
Drosophila_willistoni_1.3 3 3
Drosophila_pseudoobscura_2.13 2 2
Drosophila_persimilis_1.3 2 2
Drosophila_suzukii 1 1
Drosophila_yakuba_1.3 1 1
Drosophila_simulans_1.3 2 2
Drosophila_sechellia_1.3 3 3
Drosophila_erecta_1.3 3 2
Drosophila_ananassae_1.3 1 1
Megaselia_scalaris_22 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   5 5
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1 1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   5 5
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   2 2
Rhodnius_prolixus_22 5 5
Strigamia_maritima_22 14 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3 3
Pristionchus_pacificus_ 3 3
Meloidogyne_incognita_   (Southern root-knot nematode)   2 2
Meloidogyne_hapla_ 2 2
Caenorhabditis_japonica_ 3 3
Caenorhabditis_brenneri_ 13 9
Caenorhabditis_remanei_ 15 8
Caenorhabditis_elegans_76_235   (Roundworm)   44 19
Caenorhabditis_briggsae_2 9 6
Echinococcus_multilocularis_ 2 2
Echinococcus_granulosus_ 1 1
Mnemiopsis_leidyi   (Sea walnut)   4 4
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 3 3
Nematostella_vectensis_1.0   (Starlet sea anemone)   9 9
Hydra_vulgaris 3 2
Amphimedon_queenslandica 9 9
Monosiga_brevicollis_ 1 1
Sphaeroforma_arctica_JP610_ 6 5
Capsaspora_owczarzaki_ATCC_30864_ 3 3
Conidiobolus_coronatus_NRRL28638_v1.0 3 2
Mortierella_verticillata_NRRL_6337_ 1 1
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 2 2
Mucor_circinelloides_ 4 4
Rhizomucor_miehei_CAU432_ 2 2
Malassezia_globosa_CBS_7966_ 4 4
Sporisorium_reilianum_22 2 2
Ustilago_maydis_ 2 2
Mixia_osmundae_IAM_14324_v1.0 2 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4 3
Melampsora_laricis-populina_ 2 2
Microbotryum_violaceum_22 3 3
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 1 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 1 1
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 3 3
Pleurotus_ostreatus_   (Oyster mushroom)   2 2
Hebeloma_cylindrosporum_h7_v2.0 2 2
Laccaria_bicolor_S238N-H82_ 5 5
Agaricus_bisporus_var._bisporus_ 1 1
Heterobasidion_annosum_ 3 3
Gloeophyllum_trabeumv1.0 1 1
Punctularia_strigosozonata_v1.0 1 1
Sebacina_vermifera_MAFF_305830_v1.0 3 3
Fomitiporia_mediterranea_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Trametes_versicolor_v1.0 1 1
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 3 2
Apiospora_montagnei_NRRL_25634_v1.0 4 4
Magnaporthe_poae_ATCC_64411_22 2 2
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_albo-atrum_VaMs.102_ 1 1
Glomerella_graminicola_22 2 2
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 1 1
Leptosphaeria_maculans_22 2 2
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 1 1
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 1 1
Dothistroma_septosporum 1 1
Septoria_musiva_v1.0 1 1
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_versicolor_v1.0 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_oryzae_RIB40_ 2 2
Aspergillus_niger_22 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Hansenula_polymorpha_v2.0 3 3
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 4 4
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 3 2
Candida_guilliermondii_ATCC_6260_ 1 1
Wickerhamomyces_anomalus 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 3 3
Candida_lusitaniae_ATCC_42720_ 1 1
Candida_glabrata_CBS138 1 1
Lachancea_kluyveri_ 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 2 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Catenaria_anguillulae_PL171_v1.0 1 1
Spizellomyces_punctatus_DAOM_BR117_ 4 3
Dictyostelium_discoideum 15 14
Dictyostelium_purpureum_ 6 5
Entamoeba_dispar_1.2 1 1
Entamoeba_invadens_1.2 2 2
Selaginella_moellendorffii_ 6 6
Pinus_taeda   (Loblolly pine)   2 2
Picea_abies   (Norway spruce)   6 6
Eucalyptus_grandis_v201   (Rose gum)   6 6
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3 3
Gossypium_raimondii_v221 9 9
Citrus_clementina_v165 5 5
Citrus_sinensis_v154   (Sweet orange)   6 6
Thellungiella_halophila_v173 10 10
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   10 10
Capsella_rubella_v183 10 10
Arabidopsis_lyrata_   (Lyrate rockcress)   7 7
Arabidopsis_thaliana_10   (Thale cress)   12 12
Carica_papaya_   (Papaya)   6 5
Medicago_truncatula_   (Barrel medic)   4 4
Phaseolus_vulgaris_v186   (French bean)   3 3
Glycine_max_v109   (Soybean)   5 5
Cucumis_sativus_v122   (Cucumber)   7 7
Fragaria_vesca_   (Wild strawberry)   4 4
Malus_domestica_v196   (Apple)   5 5
Prunus_persica_v139   (Peach)   5 5
Linum_usitatissimum_v200   (Flax)   9 8
Manihot_esculenta_v147   (Cassava)   7 7
Populus_trichocarpa_v156   (Black cottonwood)   6 6
Vitis_vinifera_   (Wine grape)   2 2
Mimulus_guttatus_v140   (Spotted monkey flower)   6 6
Solanum_lycopersicum_v.2.3   (Tomato)   6 6
Solanum_tuberosum_   (Potato)   7 7
Actinidia_chinensis_Hongyang_ 7 7
Aquilegia_coerulea_v195 13 13
Triticum_urartu_22 1 1
Triticum_aestivum_22   (Bread wheat)   14 14
Aegilops_tauschii_22 3 3
Brachypodium_distachyon_   (Stiff brome)   11 11
Oryza_barthii_22   (African wild rice)   5 5
Oryza_meridionalis_22 5 5
Oryza_glumaepatula_22 3 3
Oryza_glaberrima   (African rice)   2 2
Oryza_punctata_22 9 9
Oryza_nivara_22 4 4
Oryza_brachyantha_22   (Malo sina)   3 3
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   7 7
Oryza_sativa_v193   (Rice)   7 7
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   4 4
Panicum_virgatum_v202   (Switchgrass)   6 6
Setaria_italica_v164   (Foxtail millet)   5 5
Zea_mays_subsp._mays_   (Maize)   8 8
Zea_mays_v181   (Maize)   8 8
Sorghum_bicolor_   (Sorghum)   1 1
Musa_balbisiana   (Balbis banana)   4 4
Musa_acuminata_22   (Wild Malaysian banana)   3 3
Amborella_trichopoda_22 2 2
Physcomitrella_patens 11 11
Coccomyxa_subellipsoidea_sp._C-169_v2 2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 3 2
Chlorella_variabilis_sp._NC64A_ 3 3
Chlorella_vulgaris_ 2 1
Volvox_carteri_f._nagariensis_ 3 3
Volvox_carteri_v199 2 2
Chlamydomonas_reinhardtii_4.0 1 1
Ostreococcus_sp._RCC809_ 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Bigelowiella_natans_CCMP2755_22 1 1
Cyanophora_paradoxa_ 6 4
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 4 4
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_vivax_ 3 1
Trypanosoma_congolense_2.4 1 1
Ectocarpus_siliculosus 2 2
Albugo_laibachii_22 4 3
Pythium_iwayamai_DAOM_BR242034_22 4 4
Pythium_arrhenomanes_ATCC_12531_22 3 3
Pythium_ultimum_v1.7-2 5 4
Pythium_aphanidermatum_DAOM_BR444_22 5 4
Pythium_irregulare_DAOM_BR486_22 7 7
Pythium_vexans_DAOM_BR484_22 4 4
Phytophthora_ramorum_1.1   (Sudden oak death agent)   6 6
Phytophthora_sojae_1.1 3 3
Phytophthora_infestans_T30-4_ 6 6
Phytophthora_capsici_ 5 5
Hyaloperonospora_arabidopsidis_22 3 3
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 6 6
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Neospora_caninum 2 2
Toxoplasma_gondii_VEG 2 2
Toxoplasma_gondii_ME49 2 2
Toxoplasma_gondii_GT1 2 2
Theileria_annulata 1 1
Plasmodium_falciparum_3D7_ 1 1
Plasmodium_vivax_SaI-1_7.0 2 1
Plasmodium_knowlesi_strain_H_ 2 2
Plasmodium_yoelii_ssp._yoelii_1_ 5 4
Plasmodium_chabaudi_ 6 4
Plasmodium_berghei_ANKA_ 4 3
Symbiodinium_minutum_clade_B1_v1.2 11 10
Naegleria_gruberi_ 4 4
Trichomonas_vaginalis_ 5 5
Guillardia_theta_CCMP2712_v1.0_ 2 2
Emiliania_huxleyi_CCMP1516_ 4 4
Thermobaculum_terrenum_ATCC_BAA-798 1 1
Leptolyngbya_sp._PCC_7376 2 2
Pseudanabaena_sp._PCC_7367 1 1
Acaryochloris_marina_MBIC11017 4 4
Synechocystis_sp._PCC_6803 1 1
Thermosynechococcus_sp._NK55 1 1
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_7502 1 1
Synechococcus_elongatus_PCC_7942 1 1
Microcoleus_sp._PCC_7113 5 4
Trichodesmium_erythraeum_IMS101 2 2
Geitlerinema_sp._PCC_7407 2 2
Cyanothece_sp._PCC_8802 4 4
Gloeocapsa_sp._PCC_7428 5 5
Halothece_sp._PCC_7418 5 5
Microcystis_aeruginosa_NIES-843 11 11
Gloeobacter_violaceus_PCC_7421 1 1
Rivularia_sp._PCC_7116 6 5
Calothrix_sp._PCC_7507 2 2
Anabaena_variabilis_ATCC_29413 4 4
'Nostoc_azollae'_0708 1 1
Nostoc_sp._PCC_7107 2 2
Nostoc_punctiforme_PCC_73102 3 3
Nostoc_sp._PCC_7120 2 2
Nostoc_sp._PCC_7524 3 3
Anabaena_sp._90 4 4
Mycoplasma_suis_KI3806 2 2
Mycoplasma_arthritidis_158L3-1 1 1
Mycoplasma_synoviae_53 1 1
Eggerthella_sp._YY7918 1 1
Eggerthella_lenta_DSM_2243 1 1
Atopobium_parvulum_DSM_20469 1 1
Nakamurella_multipartita_DSM_44233 2 2
Modestobacter_marinus 1 1
Blastococcus_saxobsidens_DD2 2 2
Geodermatophilus_obscurus_DSM_43160 2 2
Catenulispora_acidiphila_DSM_44928 2 1
Stackebrandtia_nassauensis_DSM_44728 1 1
Frankia_alni_ACN14a 1 1
Thermobifida_fusca_YX 4 3
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 3 2
Thermomonospora_curvata_DSM_43183 2 2
Kitasatospora_setae_KM-6054 2 1
Streptomyces_coelicolor_A3(2) 1 1
Streptomyces_sp._PAMC26508 2 1
Streptomyces_flavogriseus_ATCC_33331 1 1
Streptomyces_sp._SirexAA-E 2 2
Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2
Streptomyces_scabiei_87.22 1 1
Actinosynnema_mirum_DSM_43827 2 2
Saccharomonospora_viridis_DSM_43017 1 1
Pseudonocardia_dioxanivorans_CB1190 3 3
Saccharopolyspora_erythraea_NRRL_2338 2 2
Amycolatopsis_mediterranei_U32 1 1
Kribbella_flavida_DSM_17836 4 4
Nocardioides_sp._JS614 2 2
Microlunatus_phosphovorus_NM-1 1 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1 1
Salinispora_tropica_CNB-440 1 1
Actinoplanes_sp._N902-109 2 2
Actinoplanes_sp._SE50/110 2 2
Segniliparus_rotundus_DSM_44985 1 1
Tsukamurella_paurometabola_DSM_20162 1 1
Gordonia_sp._KTR9 1 1
Gordonia_polyisoprenivorans_VH2 1 1
Gordonia_bronchialis_DSM_43247 2 2
Nocardia_cyriacigeorgica_GUH-2 1 1
Mycobacterium_massiliense_str._GO_06 1 1
Mycobacterium_abscessus_ATCC_19977 2 2
Mycobacterium_sp._JLS 1 1
Mycobacterium_intracellulare_ATCC_13950 2 2
Mycobacterium_avium_104 1 1
Mycobacterium_vanbaalenii_PYR-1 1 1
Mycobacterium_canettii_CIPT_140010059 2 2
Mycobacterium_africanum_GM041182 2 2
Mycobacterium_tuberculosis_KZN_1435 2 2
Mycobacterium_tuberculosis 2 2
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 2 2
Mycobacterium_rhodesiae_NBB3 1 1
Mycobacterium_ulcerans_Agy99 1 1
Mycobacterium_gilvum_PYR-GCK 1 1
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_marinum_M 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Mycobacterium_leprae_Br4923 1 1
Corynebacterium_kroppenstedtii_DSM_44385 1 1
Corynebacterium_variabile_DSM_44702 1 1
Tropheryma_whipplei_TW08/27 1 1
Sanguibacter_keddieii_DSM_10542 2 1
Beutenbergia_cavernae_DSM_12333 1 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 1 1
Jonesia_denitrificans_DSM_20603 1 1
Intrasporangium_calvum_DSM_43043 2 2
Isoptericola_variabilis_225 2 2
Xylanimonas_cellulosilytica_DSM_15894 1 1
Cellulomonas_flavigena_DSM_20109 2 1
Cellulomonas_fimi_ATCC_484 3 2
[Cellvibrio]_gilvus_ATCC_13127 1 1
Arthrobacter_chlorophenolicus_A6 2 2
Renibacterium_salmoninarum_ATCC_33209 1 1
Gardnerella_vaginalis_409-05 1 1
Bifidobacterium_dentium_Bd1 1 1
Bifidobacterium_adolescentis_ATCC_15703 2 2
Arcanobacterium_haemolyticum_DSM_20595 1 1
Anaerolinea_thermophila_UNI-1 1 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Herpetosiphon_aurantiacus_DSM_785 1 1
Roseiflexus_sp._RS-1 1 1
Roseiflexus_castenholzii_DSM_13941 1 1
Truepera_radiovictrix_DSM_17093 1 1
Deinococcus_gobiensis_I-0 1 1
Deinococcus_proteolyticus_MRP 1 1
Deinococcus_radiodurans_R1 2 2
Meiothermus_silvanus_DSM_9946 1 1
Thermus_scotoductus_SA-01 4 3
Thermus_thermophilus_HB27 2 2
Finegoldia_magna_ATCC_29328 1 1
Selenomonas_sputigena_ATCC_35185 1 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 1 1
Clostridium_clariflavum_DSM_19732 1 1
Eubacterium_siraeum 1 1
Ethanoligenens_harbinense_YUAN-3 1 1
Oscillibacter_valericigenes_Sjm18-20 1 1
butyrate-producing_bacterium_SS3/4 1 1
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfitobacterium_hafniense_Y51 1 1
Desulfitobacterium_dehalogenans_ATCC_51507 2 2
Desulfotomaculum_kuznetsovii_DSM_6115 6 3
Acetobacterium_woodii_DSM_1030 2 2
Eubacterium_limosum_KIST612 2 2
Clostridium_sticklandii_DSM_519 1 1
Clostridium_lentocellum_DSM_5427 1 1
Eubacterium_rectale_M104/1 1 1
Eubacterium_rectale_ATCC_33656 1 1
Coprococcus_sp._ART55/1 2 2
Butyrivibrio_proteoclasticus_B316 2 2
Syntrophothermus_lipocalidus_DSM_12680 1 1
Clostridium_tetani_E88 1 1
Clostridium_botulinum_A_str._ATCC_3502 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Coprothermobacter_proteolyticus_DSM_5265 1 1
Carboxydothermus_hydrogenoformans_Z-2901 1 1
Moorella_thermoacetica_ATCC_39073 1 1
Carnobacterium_sp._17-4 1 1
Carnobacterium_sp._WN1359 1 1
Tetragenococcus_halophilus_NBRC_12172 2 2
Melissococcus_plutonius_DAT561 1 1
Enterococcus_sp._7L76 2 2
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecalis_62 2 2
Leuconostoc_sp._C2 1 1
Leuconostoc_kimchii_IMSNU_11154 1 1
Leuconostoc_citreum_KM20 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1 1
Leuconostoc_gasicomitatum_LMG_18811 1 1
Lactobacillus_salivarius_CECT_5713 1 1
Lactococcus_garvieae_ATCC_49156 2 2
Lactococcus_lactis_subsp._cremoris_MG1363 2 2
Streptococcus_intermedius_JTH08 1 1
Streptococcus_equi_subsp._equi_4047 4 4
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 2 2
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Streptococcus_uberis_0140J 1 1
Streptococcus_parauberis_KCTC_11537 1 1
Streptococcus_parasanguinis_ATCC_15912 1 1
Streptococcus_pyogenes_str._Manfredo 3 3
Streptococcus_agalactiae_A909 1 1
Streptococcus_mutans_NN2025 1 1
Streptococcus_thermophilus_LMD-9 1 1
Streptococcus_salivarius_57.I 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Paenibacillus_mucilaginosus_3016 1 1
Bacillus_selenitireducens_MLS10 2 2
Listeria_welshimeri_serovar_6b_str._SLCC5334 1 1
Listeria_innocua_Clip11262 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Lysinibacillus_sphaericus_C3-41 1 1
Anoxybacillus_flavithermus_WK1 2 2
Geobacillus_thermoleovorans_CCB_US3_UF5 2 2
Geobacillus_kaustophilus_HTA426 2 2
Geobacillus_sp._GHH01 2 2
Geobacillus_sp._WCH70 2 2
Halobacillus_halophilus_DSM_2266 1 1
Bacillus_pseudofirmus_OF4 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Candidatus_Cloacamonas_acidaminovorans 1 1
Haliscomenobacter_hydrossis_DSM_1100 1 1
Chitinophaga_pinensis_DSM_2588 1 1
Salinibacter_ruber_M8 1 1
Rhodothermus_marinus_DSM_4252 2 2
Flexibacter_litoralis_DSM_6794 2 2
Candidatus_Amoebophilus_asiaticus_5a2 1 1
Belliella_baltica_DSM_15883 1 1
Marivirga_tractuosa_DSM_4126 2 2
Fibrella_aestuarina 1 1
Leadbetterella_byssophila_DSM_17132 2 1
Dyadobacter_fermentans_DSM_18053 1 1
Spirosoma_linguale_DSM_74 3 3
Runella_slithyformis_DSM_19594 2 2
Parabacteroides_distasonis_ATCC_8503 1 1
Tannerella_forsythia_ATCC_43037 1 1
Odoribacter_splanchnicus_DSM_20712 1 1
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1 1
Porphyromonas_asaccharolytica_DSM_20707 1 1
Bacteroides_salanitronis_DSM_18170 1 1
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Solitalea_canadensis_DSM_3403 1 1
Owenweeksia_hongkongensis_DSM_17368 1 1
Lacinutrix_sp._5H-3-7-4 1 1
Croceibacter_atlanticus_HTCC2559 1 1
Zobellia_galactanivorans 1 1
Cellulophaga_algicola_DSM_14237 1 1
Polaribacter_sp._MED152 2 2
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 2 2
Weeksella_virosa_DSM_16922 2 2
Flavobacterium_indicum_GPTSA100-9 1 1
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 1 1
Isosphaera_pallida_ATCC_43644 2 2
Planctomyces_limnophilus_DSM_3776 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Turneriella_parva_DSM_21527 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 2 2
Leptospira_interrogans_serovar_Lai_str._IPAV 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Brachyspira_murdochii_DSM_12563 6 1
Brachyspira_intermedia_PWS/A 7 1
Brachyspira_pilosicoli_95/1000 7 1
Brachyspira_hyodysenteriae_WA1 6 1
Borrelia_garinii_PBi 2 1
Borrelia_bissettii_DN127 6 6
Borrelia_afzelii_PKo 3 3
Borrelia_burgdorferi_B31 8 7
Borrelia_recurrentis_A1 4 4
Borrelia_duttonii_Ly 6 6
Borrelia_crocidurae_str._Achema 7 6
Borrelia_turicatae_91E135 2 1
Borrelia_hermsii_DAH 1 1
Spirochaeta_smaragdinae_DSM_11293 2 2
Sphaerochaeta_coccoides_DSM_17374 1 1
Treponema_primitia_ZAS-2 1 1
Treponema_brennaborense_DSM_12168 2 1
Treponema_paraluiscuniculi_Cuniculi_A 1 1
Treponema_succinifaciens_DSM_2489 4 1
Treponema_pallidum_subsp._pallidum_SS14 2 2
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_africana_DSM_8902 1 1
Spirochaeta_thermophila_DSM_6192 2 1
Thermodesulfatator_indicus_DSM_15286 1 1
Thermodesulfobacterium_sp._OPB45 1 1
Desulfurispirillum_indicum_S5 2 2
Calditerrivibrio_nitroreducens_DSM_19672 1 1
Flexistipes_sinusarabici_DSM_4947 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Thermovibrio_ammonificans_HB-1 1 1
Hydrogenobaculum_sp._SN 1 1
Hydrogenobaculum_sp._HO 1 1
Thermocrinis_albus_DSM_14484 1 1
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Terriglobus_saanensis_SP1PR4 2 2
Terriglobus_roseus_DSM_18391 1 1
Acidobacterium_capsulatum_ATCC_51196 1 1
Thermodesulfovibrio_yellowstonii_DSM_11347 1 1
Leptospirillum_ferrooxidans_C2-3 1 1
Streptobacillus_moniliformis_DSM_12112 1 1
Sebaldella_termitidis_ATCC_33386 1 1
Ilyobacter_polytropus_DSM_2926 1 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
candidate_division_WWE3_bacterium_RAAC2_WWE3_1 1 1
Bdellovibrio_bacteriovorus_HD100 1 1
Arcobacter_nitrofigilis_DSM_7299 1 1
Campylobacter_sp._03-427 1 1
uncultured_Sulfuricurvum_sp._RIFRC-1 1 1
Sulfuricurvum_kujiense_DSM_16994 2 2
Wolinella_succinogenes_DSM_1740 1 1
Helicobacter_hepaticus_ATCC_51449 1 1
Helicobacter_pylori_B38 1 1
Nitratiruptor_sp._SB155-2 1 1
Sulfurovum_sp._NBC37-1 1 1
Desulfobacca_acetoxidans_DSM_11109 3 3
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfohalobium_retbaense_DSM_5692 1 1
Lawsonia_intracellularis_PHE/MN1-00 1 1
Desulfovibrio_magneticus_RS-1 1 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1 1
Desulfovibrio_africanus_str._Walvis_Bay 1 1
Hippea_maritima_DSM_10411 1 1
Geobacter_sp._M21 1 1
Geobacter_lovleyi_SZ 2 2
Geobacter_bemidjiensis_Bem 1 1
Geobacter_metallireducens_GS-15 1 1
Babela_massiliensis 1 1
Sorangium_cellulosum_'So_ce_56' 1 1
Stigmatella_aurantiaca_DW4/3-1 2 1
Corallococcus_coralloides_DSM_2259 2 2
Thauera_sp._MZ1T 2 2
Azoarcus_sp._KH32C 2 2
Azoarcus_sp._BH72 1 1
Aromatoleum_aromaticum_EbN1 1 1
Dechlorosoma_suillum_PS 1 1
Neisseria_meningitidis_alpha14 1 1
Neisseria_meningitidis_FAM18 1 1
Neisseria_lactamica_020-06 1 1
Neisseria_gonorrhoeae_NCCP11945 2 2
beta_proteobacterium_CB 1 1
Thiomonas_arsenitoxydans 1 1
Rubrivivax_gelatinosus_IL144 1 1
Leptothrix_cholodnii_SP-6 1 1
Burkholderia_rhizoxinica_HKI_454 2 2
Burkholderia_xenovorans_LB400 1 1
Ralstonia_eutropha_JMP134 1 1
Cupriavidus_taiwanensis_LMG_19424 2 2
Cupriavidus_metallidurans_CH34 1 1
Ralstonia_pickettii_12D 1 1
Ralstonia_solanacearum_CFBP2957 1 1
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 1 1
Burkholderia_sp._RPE64 1 1
Burkholderia_sp._CCGE1002 1 1
Burkholderia_thailandensis_E264 2 2
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 1 1
Burkholderia_cenocepacia_HI2424 2 2
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_gladioli_BSR3 1 1
Burkholderia_glumae_BGR1 1 1
Verminephrobacter_eiseniae_EF01-2 1 1
Ramlibacter_tataouinensis_TTB310 2 2
Delftia_sp._Cs1-4 1 1
Delftia_acidovorans_SPH-1 1 1
Polaromonas_sp._JS666 1 1
Polaromonas_naphthalenivorans_CJ2 3 3
Variovorax_paradoxus_S110 1 1
Rhodoferax_ferrireducens_T118 1 1
Acidovorax_ebreus_TPSY 1 1
Acidovorax_sp._KKS102 1 1
Acidovorax_sp._JS42 1 1
Acidovorax_citrulli_AAC00-1 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Comamonas_testosteroni_CNB-2 1 1
Herminiimonas_arsenicoxydans 2 2
Collimonas_fungivorans_Ter331 1 1
Janthinobacterium_sp._Marseille 1 1
Herbaspirillum_seropedicae_SmR1 1 1
Pusillimonas_sp._T7-7 1 1
Taylorella_asinigenitalis_MCE3 1 1
Bordetella_petrii_DSM_12804 3 3
Bordetella_pertussis_Tohama_I 1 1
Bordetella_parapertussis_12822 1 1
Bordetella_bronchiseptica_RB50 2 2
Achromobacter_xylosoxidans_A8 2 2
Achromobacter_xylosoxidans 1 1
Thiobacillus_denitrificans_ATCC_25259 1 1
Nitrosospira_multiformis_ATCC_25196 1 1
Nitrosomonas_sp._Is79A3 3 3
Magnetococcus_marinus_MC-1 1 1
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 1 1
Caulobacter_segnis_ATCC_21756 1 1
Phenylobacterium_zucineum_HLK1 1 1
Novosphingobium_sp._PP1Y 2 2
Hirschia_baltica_ATCC_49814 1 1
Phaeobacter_gallaeciensis_2.10 1 1
Pseudovibrio_sp._FO-BEG1 5 1
Ruegeria_sp._TM1040 1 1
Roseobacter_litoralis_Och_149 1 1
Roseobacter_denitrificans_OCh_114 2 2
Paracoccus_denitrificans_PD1222 1 1
Magnetospirillum_magneticum_AMB-1 1 1
Rhodospirillum_centenum_SW 1 1
Azospirillum_brasilense_Sp245 1 1
Gluconacetobacter_xylinus_NBRC_3288 1 1
Granulibacter_bethesdensis_CGDNIH1 1 1
Acetobacter_pasteurianus_IFO_3283-01 1 1
Polymorphum_gilvum_SL003B-26A1 6 3
Candidatus_Puniceispirillum_marinum_IMCC1322 1 1
Orientia_tsutsugamushi_str._Boryong 1 1
Rickettsia_bellii_OSU_85-389 1 1
Rickettsia_canadensis_str._McKiel 1 1
Starkeya_novella_DSM_506 2 1
Xanthobacter_autotrophicus_Py2 2 2
Azorhizobium_caulinodans_ORS_571 4 2
Methylobacterium_chloromethanicum_CM4 5 2
Methylobacterium_extorquens_AM1 5 2
Methylobacterium_populi_BJ001 4 2
Methylobacterium_nodulans_ORS_2060 3 1
Methylobacterium_radiotolerans_JCM_2831 2 1
Ochrobactrum_anthropi_ATCC_49188 1 1
Brucella_microti_CCM_4915 3 2
Brucella_pinnipedialis_B2/94 3 2
Brucella_canis_ATCC_23365 3 2
Brucella_suis_ATCC_23445 3 2
Brucella_melitensis_ATCC_23457 3 2
Brucella_ovis_ATCC_25840 3 2
Brucella_abortus_S19 3 2
Sinorhizobium_fredii_NGR234 2 1
Sinorhizobium_medicae_WSM419 4 1
Sinorhizobium_meliloti_AK83 4 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 3 1
Rhizobium_etli_CIAT_652 4 1
Rhizobium_leguminosarum_bv._viciae_3841 4 1
Agrobacterium_tumefaciens_str._C58 2 1
Agrobacterium_radiobacter_K84 4 1
Agrobacterium_sp._H13-3 2 1
Agrobacterium_vitis_S4 3 1
Candidatus_Liberibacter_asiaticus_str._psy62 1 1
Mesorhizobium_sp._BNC1 1 1
Mesorhizobium_opportunistum_WSM2075 2 2
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1
Mesorhizobium_loti_MAFF303099 3 2
Methylocella_silvestris_BL2 7 1
Beijerinckia_indica_subsp._indica_ATCC_9039 6 2
Pelagibacterium_halotolerans_B2 2 1
Rhodomicrobium_vannielii_ATCC_17100 1 1
Hyphomicrobium_sp._MC1 1 1
Hyphomicrobium_denitrificans_ATCC_51888 1 1
Oligotropha_carboxidovorans_OM4 2 1
Rhodopseudomonas_palustris_BisA53 4 3
Nitrobacter_winogradskyi_Nb-255 1 1
Nitrobacter_hamburgensis_X14 1 1
Bradyrhizobium_japonicum_USDA_110 2 1
Bradyrhizobium_sp._ORS_278 1 1
Methylocystis_sp._SC2 4 1
Bartonella_tribocorum_CIP_105476 1 1
Bartonella_clarridgeiae_73 1 1
Bartonella_henselae_str._Houston-1 2 1
Bartonella_grahamii_as4aup 2 1
Bartonella_quintana_str._Toulouse 3 1
Bartonella_bacilliformis_KC583 2 1
Aggregatibacter_actinomycetemcomitans_D7S-1 1 1
Haemophilus_somnus_129PT 1 1
Pasteurella_multocida_subsp._multocida_str._3480 2 2
Haemophilus_ducreyi_35000HP 1 1
Haemophilus_influenzae_PittEE 2 2
Actinobacillus_succinogenes_130Z 1 1
Psychromonas_ingrahamii_37 1 1
Shewanella_sp._MR-4 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Marinobacter_adhaerens_HP15 3 3
Marinobacter_sp._BSs20148 2 2
Marinobacter_hydrocarbonoclasticus_ATCC_49840 2 2
Marinobacter_aquaeolei_VT8 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 2 2
Kangiella_koreensis_DSM_16069 1 1
Hahella_chejuensis_KCTC_2396 1 1
Alcanivorax_borkumensis_SK2 1 1
Halomonas_elongata_DSM_2581 1 1
Methylomicrobium_alcaliphilum 2 2
Pseudoxanthomonas_spadix_BD-a59 1 1
Pseudoxanthomonas_suwonensis_11-1 1 1
Stenotrophomonas_maltophilia_K279a 1 1
Xylella_fastidiosa_M23 1 1
Xanthomonas_albilineans_GPE_PC73 1 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1 1
Xanthomonas_campestris_pv._campestris_str._B100 1 1
Alkalilimnicola_ehrlichii_MLHE-1 1 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1 1
Thioalkalivibrio_sp._K90mix 1 1
Halorhodospira_halophila_SL1 1 1
Allochromatium_vinosum_DSM_180 1 1
Thiocystis_violascens_DSM_198 2 2
Nitrosococcus_watsonii_C-113 1 1
Nitrosococcus_halophilus_Nc4 1 1
Legionella_pneumophila_str._Corby 1 1
gamma_proteobacterium_HdN1 1 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1
Xenorhabdus_bovienii_SS-2004 2 2
Xenorhabdus_nematophila_ATCC_19061 2 2
Providencia_stuartii_MRSN_2154 1 1
Proteus_mirabilis_HI4320 1 1
Serratia_sp._AS12 1 1
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 1 1
Dickeya_dadantii_Ech703 1 1
Sodalis_glossinidius_str._'morsitans' 2 2
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 1 1
Erwinia_amylovora_ATCC_49946 2 2
Klebsiella_oxytoca_E718 1 1
Enterobacter_aerogenes_KCTC_2190 1 1
Citrobacter_koseri_ATCC_BAA-895 1 1
Pseudomonas_sp._VLB120 1 1
Moraxella_catarrhalis_RH4 2 2
Acinetobacter_oleivorans_DR1 2 2
Acinetobacter_calcoaceticus_PHEA-2 2 2
Acinetobacter_baumannii_ATCC_17978 2 2
Acinetobacter_sp._ADP1 1 1
Methylophaga_sp._JAM1 1 1
Thiomicrospira_crunogena_XCL-2 2 2
Thioalkalimicrobium_cyclicum_ALM1 1 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1 1
Francisella_novicida_U112 1 1
Cenarchaeum_symbiosum_A 1 1
Candidatus_Korarchaeum_cryptofilum_OPF8 3 3
Pyrolobus_fumarii_1A 3 3
Hyperthermus_butylicus_DSM_5456 1 1
Thermogladius_cellulolyticus_1633 1 1
Ignicoccus_hospitalis_KIN4/I 2 2
Staphylothermus_marinus_F1 1 1
Desulfurococcus_fermentans_DSM_16532 1 1
Desulfurococcus_kamchatkensis_1221n 1 1
Metallosphaera_sedula_DSM_5348 4 3
Acidianus_hospitalis_W1 1 1
Sulfolobus_tokodaii_str._7 2 2
Sulfolobus_solfataricus_P2 1 1
Pyrobaculum_calidifontis_JCM_11548 2 2
Pyrobaculum_oguniense_TE7 1 1
halophilic_archaeon_DL31 1 1
Methanocella_arvoryzae_MRE50 3 2
Methanocella_conradii_HZ254 1 1
Methanocella_paludicola_SANAE 1 1
Methanosaeta_harundinacea_6Ac 1 1
Methanosaeta_concilii_GP6 1 1
Methanosarcina_acetivorans_C2A 1 1
Archaeoglobus_veneficus_SNP6 1 1
Salinarchaeum_sp._Harcht-Bsk1 1 1
Haloterrigena_turkmenica_DSM_5511 2 2
Halorubrum_lacusprofundi_ATCC_49239 1 1
Halorhabdus_utahensis_DSM_12940 1 1
Natronomonas_pharaonis_DSM_2160 2 2
Halalkalicoccus_jeotgali_B3 1 1
Methanobrevibacter_ruminantium_M1 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   21 16
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1 1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2 2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   4 2
Histoplasma_capsulatum_H143 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 1 1
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_VL3 1 1
Saccharomyces_cerevisiae_LalvinQA23 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_AWRI1631 1 1
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4 4
Hordeum_vulgare_22   (Domesticated barley)   8 8
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   5 5
Trypanosoma_brucei_Lister_427_v4.1 1 1
Neospora_caninum_Nc-Liverpool_6.2 2 2
Plasmodium_falciparum_Dd2_ 1 1
Chroococcidiopsis_thermalis_PCC_7203 5 5
Chamaesiphon_minutus_PCC_6605 1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1 1
Synechocystis_sp._PCC_6803_substr._GT-I 1 1
Synechocystis_sp._PCC_6803 1 1
Dactylococcopsis_salina_PCC_8305 1 1
Synechococcus_sp._RCC307 1 1
Synechococcus_elongatus_PCC_6301 1 1
Prochlorococcus_marinus_str._NATL2A 1 1
Crinalium_epipsammum_PCC_9333 2 2
Oscillatoria_nigro-viridis_PCC_7112 2 2
Oscillatoria_acuminata_PCC_6304 6 6
Arthrospira_platensis_NIES-39 7 7
Cyanothece_sp._PCC_7822 6 6
Cyanothece_sp._PCC_7425 3 3
Cyanothece_sp._PCC_7424 5 5
Cyanothece_sp._ATCC_51142 1 1
Cyanothece_sp._PCC_8801 5 5
Cyanobacterium_aponinum_PCC_10605 8 8
Cyanobacterium_stanieri_PCC_7202 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 7 7
Stanieria_cyanosphaera_PCC_7437 7 7
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Cylindrospermum_stagnale_PCC_7417 2 2
Anabaena_cylindrica_PCC_7122 2 1
Mycoplasma_parvum_str._Indiana 1 1
Candidatus_Mycoplasma_haemominutum_'Birmingham_1' 1 1
Mycoplasma_suis_str._Illinois 3 3
Mycoplasma_gallisepticum_str._R(high) 1 1
Mycoplasma_gallisepticum_str._R(low) 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Frankia_sp._EuI1c 1 1
Frankia_sp._CcI3 1 1
Nocardiopsis_alba_ATCC_BAA-2165 2 2
Streptomyces_davawensis_JCM_4913 1 1
Streptomyces_venezuelae_ATCC_10712 1 1
Streptomyces_collinus_Tu_365 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2
Saccharothrix_espanaensis_DSM_44229 2 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_orientalis_HCCB10007 2 2
Propionibacterium_avidum_44067 1 1
Nocardia_brasiliensis_ATCC_700358 1 1
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_sp._JDM601 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_liflandii_128FXT 1 1
Mycobacterium_sp._KMS 1 1
Mycobacterium_sp._MCS 1 1
Mycobacterium_yongonense_05-1390 1 1
Mycobacterium_intracellulare_MOTT-64 2 2
Mycobacterium_indicus_pranii_MTCC_9506 2 2
Mycobacterium_intracellulare_MOTT-02 2 2
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1 1
Mycobacterium_canettii_CIPT_140070017 2 2
Mycobacterium_canettii_CIPT_140060008 2 2
Mycobacterium_canettii_CIPT_140070008 2 2
Mycobacterium_canettii_CIPT_140070010 2 2
Mycobacterium_tuberculosis_EAI5/NITR206 2 2
Mycobacterium_tuberculosis_EAI5 2 2
Mycobacterium_tuberculosis_CAS/NITR204 1 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 2 2
Mycobacterium_tuberculosis_UT205 2 2
Mycobacterium_tuberculosis_RGTB423 2 2
Mycobacterium_tuberculosis_RGTB327 2 2
Mycobacterium_tuberculosis_CTRI-2 2 2
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 2 2
Mycobacterium_tuberculosis_KZN_605 2 2
Mycobacterium_tuberculosis_KZN_4207 2 2
Mycobacterium_tuberculosis_CCDC5180 2 2
Mycobacterium_tuberculosis_CCDC5079 2 2
Mycobacterium_tuberculosis_CCDC5079 2 2
Mycobacterium_tuberculosis_H37Ra 2 2
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1 1
Mycobacterium_tuberculosis_str._Haarlem 2 2
Mycobacterium_tuberculosis_F11 2 2
Mycobacterium_tuberculosis_H37Rv 2 2
Mycobacterium_tuberculosis_CDC1551 2 2
Mycobacterium_bovis_AF2122/97 2 2
Mycobacterium_bovis_BCG_str._Korea_1168P 2 2
Mycobacterium_bovis_BCG_str._Mexico 2 2
Mycobacterium_bovis_BCG_str._Tokyo_172 2 2
Mycobacterium_gilvum_Spyr1 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Mycobacterium_leprae_TN 1 1
Mycobacterium_kansasii_ATCC_12478 1 1
Tropheryma_whipplei_str._Twist 1 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 2 1
Clavibacter_michiganensis_subsp._sepedonicus 1 1
Gardnerella_vaginalis_HMP9231 1 1
Gardnerella_vaginalis_ATCC_14019 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_asteroides_PRL2011 1 1
Bifidobacterium_bifidum_PRL2010 1 1
Bifidobacterium_bifidum_BGN4 1 1
Actinomyces_odontolyticus_ATCC_17982 1 1
Actinomyces_viscosus_C505 1 1
Chthonomonas_calidirosea_T49 1 1
Thermus_oshimai_JL-2 3 3
Thermus_thermophilus_JL-18 3 3
Thermus_thermophilus_SG0.5JP17-16 3 3
Thermus_thermophilus_HB8 2 2
Erysipelothrix_rhusiopathiae_SY1027 1 1
Eubacterium_siraeum_V10Sc8a 1 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 2 2
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Clostridium_sp._SY8519 2 2
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_BKT015925 1 1
Clostridium_botulinum_F_str._230613 1 1
Clostridium_botulinum_F_str._Langeland 1 1
Clostridium_botulinum_B1_str._Okra 1 1
Clostridium_botulinum_Ba4_str._657 1 1
Clostridium_botulinum_A_str._Hall 1 1
Clostridium_botulinum_A_str._ATCC_19397 2 2
Halobacteroides_halobius_DSM_5150 1 1
Carnobacterium_maltaromaticum_LMA28 1 1
Melissococcus_plutonius_ATCC_35311 1 1
Enterococcus_casseliflavus_EC20 1 1
Enterococcus_faecalis_str._Symbioflor_1 2 2
Enterococcus_faecalis_D32 2 2
Enterococcus_faecalis_OG1RF 2 2
Enterococcus_faecalis_V583 2 2
Leuconostoc_carnosum_JB16 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 1 1
Leuconostoc_gelidum_JB7 1 1
Lactobacillus_johnsonii_DPC_6026 1 1
Lactobacillus_salivarius_UCC118 1 1
Lactococcus_garvieae_Lg2 2 2
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1 1
Lactococcus_lactis_subsp._lactis_IO-1 2 2
Lactococcus_lactis_subsp._lactis_CV56 1 1
Lactococcus_lactis_subsp._lactis_KF147 1 1
Lactococcus_lactis_subsp._lactis_Il1403 1 1
Lactococcus_lactis_subsp._cremoris_KW2 1 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1 1
Lactococcus_lactis_subsp._cremoris_A76 1 1
Lactococcus_lactis_subsp._cremoris_NZ9000 2 2
Lactococcus_lactis_subsp._cremoris_SK11 2 2
Streptococcus_constellatus_subsp._pharyngis_C1050 2 2
Streptococcus_constellatus_subsp._pharyngis_C818 2 2
Streptococcus_constellatus_subsp._pharyngis_C232 2 2
Streptococcus_intermedius_B196 2 2
Streptococcus_intermedius_C270 2 2
Streptococcus_lutetiensis_033 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 2 2
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 2 2
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 2 2
Streptococcus_iniae_SF1 1 1
Streptococcus_parasanguinis_FW213 1 1
Streptococcus_pyogenes_HSC5 3 3
Streptococcus_pyogenes_A20 2 2
Streptococcus_pyogenes_MGAS1882 2 2
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_Alab49 3 3
Streptococcus_pyogenes_MGAS10750 3 3
Streptococcus_pyogenes_MGAS10270 4 4
Streptococcus_pyogenes_MGAS2096 4 4
Streptococcus_pyogenes_MGAS9429 3 3
Streptococcus_pyogenes_MGAS6180 4 4
Streptococcus_pyogenes_NZ131 1 1
Streptococcus_pyogenes_MGAS8232 6 6
Streptococcus_pyogenes_MGAS10394 7 7
Streptococcus_pyogenes_MGAS315 4 4
Streptococcus_pyogenes_SSI-1 3 3
Streptococcus_pyogenes_M1_476 2 2
Streptococcus_pyogenes_MGAS5005 2 2
Streptococcus_pyogenes_M1_GAS 3 3
Streptococcus_pneumoniae_A026 1 1
Streptococcus_pneumoniae_ST556 1 1
Streptococcus_pneumoniae_INV200 1 1
Streptococcus_pneumoniae_TCH8431/19A 1 1
Streptococcus_pneumoniae_CGSP14 1 1
Streptococcus_agalactiae_ILRI112 1 1
Streptococcus_agalactiae_ILRI005 2 2
Streptococcus_agalactiae_09mas018883 1 1
Streptococcus_agalactiae_2-22 1 1
Streptococcus_agalactiae_SA20-06 1 1
Streptococcus_agalactiae_GD201008-001 1 1
Streptococcus_agalactiae_NEM316 1 1
Streptococcus_agalactiae_2603V/R 1 1
Streptococcus_mutans_GS-5 1 1
Streptococcus_mutans_LJ23 1 1
Streptococcus_mutans_UA159 1 1
Streptococcus_thermophilus_MN-ZLW-002 1 1
Streptococcus_thermophilus_JIM_8232 1 1
Streptococcus_thermophilus_ND03 1 1
Streptococcus_thermophilus_CNRZ1066 1 1
Streptococcus_thermophilus_LMG_18311 1 1
Streptococcus_suis_ST3 1 1
Streptococcus_suis_D9 1 1
Streptococcus_suis_D12 1 1
Streptococcus_suis_ST1 1 1
Streptococcus_salivarius_CCHSS3 1 1
Streptococcus_salivarius_JIM8777 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1
Paenibacillus_mucilaginosus_K02 2 2
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_N53-1 1 1
Listeria_monocytogenes_La111 1 1
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_M7 1 1
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_SLCC7179 1 1
Listeria_monocytogenes_SLCC2540 1 1
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_08-5578 1 1
Listeria_monocytogenes_08-5923 1 1
Listeria_monocytogenes_L99 1 1
Listeria_monocytogenes_HCC23 1 1
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_J0161 1 1
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Listeria_monocytogenes_EGD-e 1 1
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Amphibacillus_xylanus_NBRC_15112 2 2
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 2 2
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_cereus_B4264 1 1
Staphylococcus_aureus_subsp._aureus_ED98 1 1
Rhodothermus_marinus_SG0.5JP17-172 4 4
Echinicola_vietnamensis_DSM_17526 1 1
Emticicia_oligotrophica_DSM_17448 2 2
Bacteroides_xylanisolvens_XB1A 1 1
Nonlabens_dokdonensis_DSW-6 1 1
Psychroflexus_torquis_ATCC_700755 1 1
Riemerella_anatipestifer_RA-CH-2 2 2
Riemerella_anatipestifer_RA-CH-1 2 2
Riemerella_anatipestifer_RA-GD 2 2
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 2 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 2 2
Leptospira_interrogans_serovar_Lai_str._56601 1 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Brachyspira_pilosicoli_WesB 7 1
Brachyspira_pilosicoli_B2904 6 1
Borrelia_valaisiana_VS116 1 1
Borrelia_garinii_NMJW1 2 1
Borrelia_garinii_BgVir 1 1
Borrelia_afzelii_HLJ01 1 1
Borrelia_afzelii_PKo 3 3
Borrelia_burgdorferi_CA382 2 1
Borrelia_burgdorferi_JD1 8 7
Borrelia_burgdorferi_N40 6 5
Borrelia_burgdorferi_ZS7 9 7
Borrelia_miyamotoi_LB-2001 1 1
Treponema_pedis_str._T_A4 1 1
Treponema_pallidum_str._Fribourg-Blanc 1 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1 1
Spirochaeta_thermophila_DSM_6578 1 1
Leptospirillum_ferriphilum_ML-04 1 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 2 2
Fusobacterium_nucleatum_subsp._animalis_4_8 2 2
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Helicobacter_pylori_BM012S 1 1
Helicobacter_pylori_BM012A 1 1
Helicobacter_pylori_Cuz20 1 1
Lawsonia_intracellularis_N343 1 1
Geobacter_sp._M18 2 2
Myxococcus_stipitatus_DSM_14675 2 2
Neisseria_meningitidis_WUE_2594 1 1
Neisseria_meningitidis_G2136 2 2
Neisseria_meningitidis_M04-240196 1 1
Neisseria_meningitidis_M01-240149 1 1
Neisseria_meningitidis_NZ-05/33 1 1
Neisseria_meningitidis_M01-240355 1 1
Neisseria_meningitidis_8013 1 1
Neisseria_meningitidis_053442 2 2
Neisseria_meningitidis_Z2491 1 1
Neisseria_meningitidis_H44/76 1 1
Neisseria_meningitidis_alpha710 2 2
Neisseria_meningitidis_MC58 1 1
Neisseria_gonorrhoeae_TCDC-NG08107 2 2
Neisseria_gonorrhoeae_FA_1090 2 2
Burkholderia_phenoliruptrix_BR3459a 1 1
Pandoraea_pnomenusa_3kgm 2 2
Ralstonia_pickettii_12J 1 1
Ralstonia_solanacearum_FQY_4 3 2
Ralstonia_solanacearum_Po82 2 2
Ralstonia_solanacearum_PSI07 2 2
Ralstonia_solanacearum_CMR15 2 2
Ralstonia_solanacearum_GMI1000 3 2
Polynucleobacter_necessarius_subsp._necessarius_STIR1 1 1
Burkholderia_sp._YI23 1 1
Burkholderia_sp._CCGE1001 1 1
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 2 2
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 2 2
Burkholderia_cenocepacia_J2315 3 3
Burkholderia_multivorans_ATCC_17616 1 1
Variovorax_paradoxus_B4 1 1
Variovorax_paradoxus_EPS 2 2
Taylorella_asinigenitalis_14/45 1 1
Bordetella_pertussis_CS 1 1
Bordetella_parapertussis_18323 1 1
Bordetella_parapertussis_Bpp5 1 1
Bordetella_bronchiseptica_MO149 2 2
Bordetella_bronchiseptica_253 2 2
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Nitrosomonas_sp._AL212 1 1
Sulfuricella_denitrificans_skB26 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1 1
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 2 1
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 1 1
Acetobacter_pasteurianus_386B 1 1
Acetobacter_pasteurianus_IFO_3283-12 1 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1 1
Acetobacter_pasteurianus_IFO_3283-32 1 1
Acetobacter_pasteurianus_IFO_3283-26 1 1
Acetobacter_pasteurianus_IFO_3283-22 1 1
Acetobacter_pasteurianus_IFO_3283-07 1 1
Acetobacter_pasteurianus_IFO_3283-03 1 1
Orientia_tsutsugamushi_str._Ikeda 1 1
Rickettsia_bellii_RML369-C 1 1
Rickettsia_canadensis_str._CA410 2 1
Methylobacterium_extorquens_DM4 6 2
Methylobacterium_extorquens_PA1 4 2
Brucella_ceti_TE10759-12 2 1
Brucella_ceti_TE28753-12 2 1
Brucella_canis_HSK_A52141 3 2
Brucella_suis_VBI22 3 2
Brucella_suis_1330 3 2
Brucella_suis_1330 3 2
Brucella_melitensis_NI 3 2
Brucella_melitensis_M5-90 3 2
Brucella_melitensis_M28 3 2
Brucella_melitensis_bv._1_str._16M 3 2
Brucella_abortus_A13334 3 2
Brucella_melitensis_biovar_Abortus_2308 2 1
Brucella_abortus_bv._1_str._9-941 3 2
Sinorhizobium_fredii_USDA_257 2 1
Sinorhizobium_fredii_HH103 2 1
Sinorhizobium_meliloti_2011 4 1
Sinorhizobium_meliloti_GR4 4 1
Sinorhizobium_meliloti_Rm41 4 1
Sinorhizobium_meliloti_SM11 4 1
Sinorhizobium_meliloti_BL225C 4 2
Sinorhizobium_meliloti_1021 4 1
Rhizobium_etli_CFN_42 5 1
Rhizobium_etli_bv._mimosae_str._Mim1 5 1
Rhizobium_tropici_CIAT_899 3 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 3 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 4 1
Liberibacter_crescens_BT-1 2 2
Candidatus_Liberibacter_solanacearum_CLso-ZC1 1 1
Candidatus_Liberibacter_americanus_str._Sao_Paulo 1 1
Candidatus_Liberibacter_asiaticus_str._gxpsy 1 1
Mesorhizobium_australicum_WSM2073 1 1
Hyphomicrobium_nitrativorans_NL23 2 1
Hyphomicrobium_denitrificans_1NES1 1 1
Oligotropha_carboxidovorans_OM5 2 1
Oligotropha_carboxidovorans_OM5 2 1
Rhodopseudomonas_palustris_DX-1 2 2
Rhodopseudomonas_palustris_TIE-1 1 1
Rhodopseudomonas_palustris_HaA2 1 1
Rhodopseudomonas_palustris_BisB5 2 2
Rhodopseudomonas_palustris_BisB18 2 1
Rhodopseudomonas_palustris_CGA009 1 1
Bradyrhizobium_sp._S23321 2 1
Bradyrhizobium_sp._BTAi1 2 2
Bradyrhizobium_oligotrophicum_S58 1 1
Bradyrhizobium_japonicum_USDA_6 3 2
Bartonella_australis_Aust/NH1 1 1
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 2 1
Bartonella_quintana_RM-11 1 1
Mannheimia_succiniciproducens_MBEL55E 1 1
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 2 2
Aggregatibacter_actinomycetemcomitans_ANH9381 1 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1 1
Haemophilus_somnus_2336 1 1
Mannheimia_haemolytica_USMARC_2286 1 1
Mannheimia_haemolytica_M42548 1 1
Mannheimia_haemolytica_D174 1 1
Mannheimia_haemolytica_D171 1 1
Mannheimia_haemolytica_D153 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-183 1 1
Pasteurella_multocida_36950 2 2
Pasteurella_multocida_subsp._multocida_str._HN06 2 2
Pasteurella_multocida_subsp._multocida_str._Pm70 1 1
Haemophilus_influenzae_KR494 1 1
Haemophilus_influenzae_F3047 1 1
Haemophilus_influenzae_F3031 2 1
Haemophilus_influenzae_10810 2 2
Haemophilus_influenzae_86-028NP 2 1
Haemophilus_influenzae_R2866 2 1
Haemophilus_influenzae_R2846 1 1
Haemophilus_influenzae_Rd_KW20 2 2
Vibrio_nigripulchritudo_VibrioScope 1 1
Shewanella_sp._MR-7 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_U7' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_U4' 2 2
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 2 2
Alteromonas_macleodii_str._'English_Channel_615' 2 2
Alteromonas_macleodii_AltDE1 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_str._'Black_Sea_11' 2 2
Alteromonas_macleodii_ATCC_27126 2 2
Alcanivorax_dieselolei_B5 2 2
Stenotrophomonas_maltophilia_R551-3 1 1
Xylella_fastidiosa_subsp._fastidiosa_GB514 1 1
Xylella_fastidiosa_M12 1 1
Xylella_fastidiosa_Temecula1 1 1
Xylella_fastidiosa_9a5c 1 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2 2
Xanthomonas_axonopodis_pv._citrumelo_F1 2 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 1 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1 1
Xanthomonas_campestris_pv._raphani_756C 1 1
Xanthomonas_campestris_pv._campestris_str._8004 1 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1 1
Thioflavicoccus_mobilis_8321 3 3
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1
Proteus_mirabilis_BB2000 1 1
Morganella_morganii_subsp._morganii_KT 1 1
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 2 2
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_WW4 1 1
Serratia_liquefaciens_ATCC_27592 1 1
Pantoea_ananatis_LMG_5342 1 1
Pantoea_ananatis_AJ13355 1 1
Erwinia_amylovora_CFBP1430 2 2
Shigella_sonnei_53G 1 1
Klebsiella_oxytoca_KCTC_1686 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_Xuzhou21 1 1
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_SMS-3-5 2 2
Escherichia_coli_O55:H7_str._RM12579 1 1
Escherichia_coli_O55:H7_str._CB9615 1 1
Escherichia_coli_O157:H7_str._TW14359 1 1
Escherichia_coli_O157:H7_str._EC4115 1 1
Escherichia_coli_O157:H7_str._Sakai 1 1
Escherichia_coli_O157:H7_str._EDL933 1 1
Pseudomonas_monteilii_SB3101 1 1
Pseudomonas_monteilii_SB3078 1 1
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 2 2
Pseudomonas_putida_NBRC_14164 1 1
Pseudomonas_putida_S16 1 1
Pseudomonas_putida_GB-1 1 1
Pseudomonas_mendocina_NK-01 1 1
Acinetobacter_genomosp._13TU__RUH2624 3 2
Acinetobacter_sp.__SH024 2 2
Acinetobacter_calcoaceticus_ruh2202 2 2
Acinetobacter_baumannii_ZW85-1 2 2
Acinetobacter_baumannii_TYTH-1 2 2
Acinetobacter_baumannii_BJAB0868 2 2
Acinetobacter_baumannii_BJAB0715 2 2
Acinetobacter_baumannii_BJAB07104 2 2
Acinetobacter_baumannii_TCDC-AB0715 2 2
Acinetobacter_baumannii_D1279779 2 2
Acinetobacter_baumannii_MDR-TJ 2 2
Acinetobacter_baumannii_1656-2 2 2
Acinetobacter_baumannii__ATCC_19606 2 2
Acinetobacter_baumannii_AB307-0294 2 2
Acinetobacter_baumannii_AYE 2 2
Acinetobacter_baumannii_SDF 1 1
Acinetobacter_baumannii_MDR-ZJ06 2 2
Acinetobacter_baumannii_AB0057 2 2
Acinetobacter_baumannii_ACICU 2 2
Acinetobacter_junii__SH205 2 2
Acinetobacter_johnsonii__SH046 1 1
Acinetobacter_lwoffii__SH145 1 1
Methylophaga_sp._JAM7 1 1
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1
Sulfolobus_islandicus_HVE10/4 1 1
Sulfolobus_solfataricus_98/2 1 1
Sulfolobus_acidocaldarius_SUSAZ 1 1
Methanomethylovorans_hollandica_DSM_15978 1 1
Methanolobus_psychrophilus_R15 1 1
Halovivax_ruber_XH-70 1 1
Natronococcus_occultus_SP4 1 1
Natronomonas_moolapensis_8.8.11 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   5 4
Pan_troglodytes_69_2.1.4   (Chimpanzee)   5 4
Gorilla_gorilla_69_3.1   (Western gorilla)   5 4
Pongo_abelii_69_2   (Sumatran orangutan)   3 2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   5 4
Macaca_mulatta_69_1   (Rhesus monkey)   5 4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   6 5
Otolemur_garnettii_69_3   (Small-eared galago)   5 4
Microcebus_murinus_69_1   (Gray mouse lemur)   5 4
Rattus_norvegicus_69_3.4   (Norway rat)   7 5
Mus_musculus_69_38   (House mouse)   7 7
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   4 4
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   3 3
Cavia_porcellus_69_3   (Domestic guinea pig)   4 4
Oryctolagus_cuniculus_69_2   (Rabbit)   7 5
Ochotona_princeps_69   (American pika)   3 3
Sus_scrofa_69_10.2   (Pig)   5 4
Bos_taurus_69_3.1   (Cattle)   5 4
Tursiops_truncatus_69_1   (Bottlenose dolphin)   5 4
Mustela_putorius_furo_69_1.0   (Domestic ferret)   5 5
Ailuropoda_melanoleuca_69_1   (Giant panda)   4 4
Canis_familiaris_69_3.1   (Dog)   5 5
Felis_catus_69   (Domestic cat)   4 3
Equus_caballus_69_2   (Horse)   3 3
Myotis_lucifugus_69_2.0   (Little brown bat)   2 2
Pteropus_vampyrus_69_1   (Large flying fox)   4 3
Sorex_araneus_69_1   (European shrew)   3 2
Erinaceus_europaeus_69   (Western European hedgehog)   2 1
Procavia_capensis_69_1   (Cape rock hyrax)   2 2
Loxodonta_africana_69_3   (African savanna elephant)   3 3
Echinops_telfairi_69   (Small Madagascar hedgehog)   4 3
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   4 4
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_69_1.0   (Tammar wallaby)   3 3
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   7 6
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   4 3
Ornithorhynchus_anatinus_69_5   (Platypus)   4 2
Meleagris_gallopavo_69_2   (Turkey)   5 4
Gallus_gallus_69_2   (Chicken)   5 4
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2 2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   6 4
Anolis_carolinensis_69_2.0   (Green anole)   4 3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   8 6
Latimeria_chalumnae_69_1   (Coelacanth)   5 4
Gadus_morhua_69_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   6 6
Takifugu_rubripes_69_4   (Torafugu)   10 10
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   11 11
Oryzias_latipes_69_1   (Japanese medaka)   11 11
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   10 10
Oreochromis_niloticus_69_1.0   (Nile tilapia)   10 10
Danio_rerio_69_9   (Zebrafish)   15 14
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_69   (Vase tunicate)   1 1
Caenorhabditis_elegans_69_215   (Roundworm)   3 2
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1
Arabidopsis_thaliana_10   (Thale cress)   9 9

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   10 9
Homo_sapiens__(NCBI_version)   (Human)   6 5
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   7 7
Heliconius_numata__(Incomplete) 1 1
Encephalitozoon_cuniculi_(endoparasite) 1 1
Lotus_japonicus__(Early_assembly) 2 2
Malus_x_domestica_(Duplicate)   (Apple)   5 5
Ricinus_communis__(Early_assembly)   (Castor bean)   3 3
Nicotiana_benthamiana_0.4.4_(Early_draft) 11 11
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   6 6
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   6 6
Phoenix_dactylifera__(Early_draft)   (Date palm)   2 2
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 2 2
NCBI_plasmid_sequences_(Plasmids) 120 117
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 30 30
Protein_Data_Bank_(all_PDB_sequenc) 32 30
NCBI_viral_sequences_(Viral) 32 32
PDB_chains_(SCOP_1.75)_(PDB) 2 2
TargetDB__(Targets) 36 34
Protozoadb_2010_08_(Protozoadb) 60 58
STRING_v9.0.5_(STRING) 1026 902
UniProt__viral_sequences_(Viral) 21 21
Uniprot_2018_03_genome 17273 15406
NCBI_2017_08_genome 56069 51926

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