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Domain combinations for Frizzled cysteine-rich domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Frizzled cysteine-rich domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   42 36
Pan_troglodytes_76_2.1.4   (Chimpanzee)   20 19
Gorilla_gorilla_76_3.1   (Western gorilla)   21 20
Pongo_abelii_76_2   (Sumatran orangutan)   20 19
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   18 17
Papio_anubis_76   (Olive baboon)   23 23
Macaca_mulatta_76_1   (Rhesus monkey)   22 21
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   32 29
Otolemur_garnettii_76_3   (Small-eared galago)   20 19
Microcebus_murinus_76_1   (Gray mouse lemur)   13 12
Rattus_norvegicus_76_5.0   (Norway rat)   19 18
Mus_musculus_76_38   (House mouse)   34 29
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   13 12
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   19 18
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   15 13
Cavia_porcellus_76_3   (Domestic guinea pig)   18 17
Oryctolagus_cuniculus_76_2   (Rabbit)   21 20
Ochotona_princeps_76   (American pika)   13 12
Tupaia_belangeri_76   (Northern tree shrew)   10 10
Sus_scrofa_76_10.2   (Pig)   17 16
Bos_taurus_76_3.1   (Cattle)   23 22
Ovis_aries_76_3.1   (Sheep)   18 17
Vicugna_pacos_76_1   (Alpaca)   9 8
Tursiops_truncatus_76_1   (Bottlenose dolphin)   16 15
Mustela_putorius_furo_76_1.0   (Domestic ferret)   18 17
Ailuropoda_melanoleuca_76_1   (Giant panda)   22 21
Canis_familiaris_76_3.1   (Dog)   20 18
Felis_catus_76_6.2   (Domestic cat)   21 20
Equus_caballus_76_2   (Horse)   17 16
Myotis_lucifugus_76_2.0   (Little brown bat)   13 12
Pteropus_vampyrus_76_1   (Large flying fox)   13 12
Sorex_araneus_76_1   (European shrew)   7 6
Erinaceus_europaeus_76   (Western European hedgehog)   11 10
Procavia_capensis_76_1   (Cape rock hyrax)   15 14
Loxodonta_africana_76_3   (African savanna elephant)   23 23
Echinops_telfairi_76   (Small Madagascar hedgehog)   14 13
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   20 19
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8 7
Macropus_eugenii_76_1.0   (Tammar wallaby)   17 16
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   18 18
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   19 18
Ornithorhynchus_anatinus_76_5   (Platypus)   14 13
Saccoglossus_kowalevskii_v3.0 51 33
Petromyzon_marinus_76_7.0   (Sea lamprey)   10 9
Meleagris_gallopavo_76_2   (Turkey)   18 17
Gallus_gallus_76_4   (Chicken)   19 18
Anas_platyrhynchos_76_1.0   (Mallard)   15 14
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   21 20
Ficedula_albicollis_76_1.0   (Collared flycatcher)   20 19
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   21 20
Anolis_carolinensis_76_2.0   (Green anole)   22 21
Xenopus_laevis_   (African clawed frog)   88 88
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   23 22
Latimeria_chalumnae_76_1   (Coelacanth)   26 26
Lepisosteus_oculatus_76   (Spotted gar)   28 27
Gadus_morhua_76_1   (Atlantic cod)   17 17
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   24 23
Takifugu_rubripes_76_4   (Torafugu)   36 36
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   27 27
Oryzias_latipes_76_1   (Japanese medaka)   34 33
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   25 24
Poecilia_formosa_76   (Amazon molly)   27 26
Oreochromis_niloticus_76_1.0   (Nile tilapia)   29 27
Astyanax_mexicanus_76   (Mexican tetra)   28 27
Danio_rerio_76_9   (Zebrafish)   38 36
Oikopleura_dioica 7 7
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   34 34
Ciona_intestinalis_76   (Vase tunicate)   11 11
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   46 34
Adineta_vaga 12 12
Octopus_bimaculoides_280 23 15
Crassostrea_gigas_22   (Pacific oyster)   22 13
Lottia_gigantea_   (Owl limpet)   9 8
Helobdella_robusta_ 8 8
Capitella_sp._I_ 7 7
Danaus_plexippus_OGS1.0   (Monarch butterfly)   7 7
Heliconius_melpomene_   (Postman butterfly)   7 7
Bombyx_mori_   (Domestic silkworm)   8 8
Nasonia_vitripennis_   (Jewel wasp)   6 6
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   10 10
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   6 5
Linepithema_humile_v1.1   (Argentine ant)   7 7
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   8 8
Solenopsis_invicta_v.2.2.3   (Red fire ant)   8 8
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   7 7
Atta_cephalotes_v1.1 8 8
Camponotus_floridanus_v3.3   (Florida carpenter ant)   7 7
Lucilia_cuprina   (Australian sheep blowfly)   5 5
Drosophila_grimshawi_1.3 9 9
Drosophila_willistoni_1.3 8 8
Drosophila_pseudoobscura_2.13 8 8
Drosophila_persimilis_1.3 8 8
Drosophila_suzukii 8 8
Drosophila_yakuba_1.3 8 8
Drosophila_simulans_1.3 8 8
Drosophila_sechellia_1.3 9 8
Drosophila_melanogaster_76_5   (Fruit fly)   19 19
Drosophila_erecta_1.3 8 8
Drosophila_ananassae_1.3 8 8
Drosophila_virilis_1.2 8 8
Drosophila_mojavensis_1.3 8 8
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   9 9
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   9 9
Anopheles_darlingi_22   (American malaria mosquito)   6 6
Anopheles_gambiae_49_3j   (African malaria mosquito)   7 7
Tribolium_castaneum_3.0   (Red flour beetle)   6 6
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   8 8
Acyrthosiphon_pisum_   (Pea aphid)   4 4
Rhodnius_prolixus_22 7 7
Daphnia_pulex_   (Common water flea)   8 8
Strigamia_maritima_22 12 11
Sarcoptes_scabiei 7 7
Tetranychus_urticae_   (Two-spotted spider mite)   9 9
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   7 7
Pristionchus_pacificus_ 3 3
Meloidogyne_incognita_   (Southern root-knot nematode)   4 4
Onchocerca_volvulus_22 5 5
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   7 7
Caenorhabditis_japonica_ 5 5
Caenorhabditis_brenneri_ 9 9
Caenorhabditis_remanei_ 5 5
Caenorhabditis_elegans_76_235   (Roundworm)   12 12
Caenorhabditis_briggsae_2 5 5
Trichinella_spiralis_22 7 7
Hymenolepis_microstoma_ 8 8
Echinococcus_multilocularis_ 9 9
Echinococcus_granulosus_ 8 8
Taenia_solium_   (Pork tapeworm)   7 7
Schistosoma_mansoni_ 6 6
Mnemiopsis_leidyi   (Sea walnut)   4 4
Acropora_digitifera_v1.0 30 21
Nematostella_vectensis_1.0   (Starlet sea anemone)   25 17
Hydra_vulgaris 6 6
Amphimedon_queenslandica 10 9
Trichoplax_adhaerens_ 3 3
Mortierella_verticillata_NRRL_6337_ 1 1
Phycomyces_blakesleeanus_ 1 1
Mucor_circinelloides_ 1 1
Rhizomucor_miehei_CAU432_ 1 1
Spizellomyces_punctatus_DAOM_BR117_ 2 2
Dictyostelium_discoideum 6 6
Dictyostelium_purpureum_ 7 7
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Panicum_virgatum_v202   (Switchgrass)   1 1
Musa_balbisiana   (Balbis banana)   1 1
Musa_acuminata_22   (Wild Malaysian banana)   1 1
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_lucimarinus_CCE9901_ 1 1
Ostreococcus_tauri_ 1 1
Micromonas_sp._RCC299_ 2 2
Micromonas_pusilla_CCMP1545_v3.0 1 1
Thecamonas_trahens_ATCC_50062_ 2 2
Bigelowiella_natans_CCMP2755_22 1 1
Ectocarpus_siliculosus 1 1
Pythium_iwayamai_DAOM_BR242034_22 1 1
Pythium_arrhenomanes_ATCC_12531_22 2 2
Pythium_ultimum_v1.7-2 1 1
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 1 1
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_infestans_T30-4_ 2 2
Phytophthora_capsici_ 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Paramecium_tetraurelia_ 1 1
Tetrahymena_thermophila_SB210_1_ 1 1
Toxoplasma_gondii_ME49 1 1
Symbiodinium_minutum_clade_B1_v1.2 1 1
Naegleria_gruberi_ 4 4
Guillardia_theta_CCMP2712_v1.0_ 5 5
Emiliania_huxleyi_CCMP1516_ 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   49 48
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   14 14
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   7 7
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   5 5
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   8 8

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   23 22
Pan_troglodytes_69_2.1.4   (Chimpanzee)   20 19
Gorilla_gorilla_69_3.1   (Western gorilla)   18 17
Pongo_abelii_69_2   (Sumatran orangutan)   20 19
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   18 17
Macaca_mulatta_69_1   (Rhesus monkey)   20 19
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   18 17
Otolemur_garnettii_69_3   (Small-eared galago)   20 19
Microcebus_murinus_69_1   (Gray mouse lemur)   13 12
Rattus_norvegicus_69_3.4   (Norway rat)   19 18
Mus_musculus_69_38   (House mouse)   21 20
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   13 12
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   19 18
Cavia_porcellus_69_3   (Domestic guinea pig)   18 17
Oryctolagus_cuniculus_69_2   (Rabbit)   18 17
Ochotona_princeps_69   (American pika)   13 12
Tupaia_belangeri_69   (Northern tree shrew)   10 10
Sus_scrofa_69_10.2   (Pig)   15 14
Bos_taurus_69_3.1   (Cattle)   21 20
Vicugna_pacos_69_1   (Alpaca)   9 8
Tursiops_truncatus_69_1   (Bottlenose dolphin)   16 15
Mustela_putorius_furo_69_1.0   (Domestic ferret)   18 17
Ailuropoda_melanoleuca_69_1   (Giant panda)   21 20
Canis_familiaris_69_3.1   (Dog)   18 17
Felis_catus_69   (Domestic cat)   11 10
Equus_caballus_69_2   (Horse)   17 16
Myotis_lucifugus_69_2.0   (Little brown bat)   13 12
Pteropus_vampyrus_69_1   (Large flying fox)   13 12
Sorex_araneus_69_1   (European shrew)   7 6
Erinaceus_europaeus_69   (Western European hedgehog)   11 10
Procavia_capensis_69_1   (Cape rock hyrax)   15 14
Loxodonta_africana_69_3   (African savanna elephant)   19 19
Echinops_telfairi_69   (Small Madagascar hedgehog)   14 13
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   8 8
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8 7
Macropus_eugenii_69_1.0   (Tammar wallaby)   17 16
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   14 14
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   18 17
Ornithorhynchus_anatinus_69_5   (Platypus)   14 13
Petromyzon_marinus_69_7.0   (Sea lamprey)   10 9
Meleagris_gallopavo_69_2   (Turkey)   18 17
Gallus_gallus_69_2   (Chicken)   19 18
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   20 19
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   20 19
Anolis_carolinensis_69_2.0   (Green anole)   20 20
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   23 22
Latimeria_chalumnae_69_1   (Coelacanth)   23 23
Gadus_morhua_69_1   (Atlantic cod)   17 17
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   23 22
Takifugu_rubripes_69_4   (Torafugu)   19 19
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   20 20
Oryzias_latipes_69_1   (Japanese medaka)   25 24
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   25 24
Oreochromis_niloticus_69_1.0   (Nile tilapia)   25 24
Danio_rerio_69_9   (Zebrafish)   29 28
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   9 9
Ciona_intestinalis_69   (Vase tunicate)   11 11
Drosophila_melanogaster_69_5   (Fruit fly)   8 8
Caenorhabditis_elegans_69_215   (Roundworm)   5 5

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   41 36
Homo_sapiens__(NCBI_version)   (Human)   24 23
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   21 20
Heliconius_numata__(Incomplete) 1 1
Loa_loa_v3.3_(Request)   (Eye worm)   6 6
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   7 7
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   5 5
Protein_Data_Bank_(all_PDB_sequenc) 70 70
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 101 101
STRING_v9.0.5_(STRING) 847 746
Uniprot_2018_03_genome 6209 5769
NCBI_2017_08_genome 8503 7628
PDB_chains_(SCOP_1.75)_(PDB) 2 2
TargetDB__(Targets) 14 13
Protozoadb_2010_08_(Protozoadb) 2 2

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