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Domain combinations for Tricorn protease domain 2 superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Tricorn protease domain 2 domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   25 25
Pan_troglodytes_76_2.1.4   (Chimpanzee)   3 3
Gorilla_gorilla_76_3.1   (Western gorilla)   8 8
Pongo_abelii_76_2   (Sumatran orangutan)   11 11
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   10 10
Papio_anubis_76   (Olive baboon)   9 9
Macaca_mulatta_76_1   (Rhesus monkey)   15 15
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   18 18
Otolemur_garnettii_76_3   (Small-eared galago)   9 9
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   9 9
Mus_musculus_76_38   (House mouse)   11 11
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   4 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   6 6
Cavia_porcellus_76_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_76_2   (Rabbit)   6 6
Ochotona_princeps_76   (American pika)   2 2
Tupaia_belangeri_76   (Northern tree shrew)   1 1
Sus_scrofa_76_10.2   (Pig)   6 6
Bos_taurus_76_3.1   (Cattle)   8 8
Ovis_aries_76_3.1   (Sheep)   10 10
Vicugna_pacos_76_1   (Alpaca)   3 3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   6 6
Mustela_putorius_furo_76_1.0   (Domestic ferret)   7 7
Ailuropoda_melanoleuca_76_1   (Giant panda)   7 7
Canis_familiaris_76_3.1   (Dog)   12 12
Felis_catus_76_6.2   (Domestic cat)   7 7
Equus_caballus_76_2   (Horse)   9 9
Myotis_lucifugus_76_2.0   (Little brown bat)   10 10
Pteropus_vampyrus_76_1   (Large flying fox)   6 6
Erinaceus_europaeus_76   (Western European hedgehog)   2 2
Procavia_capensis_76_1   (Cape rock hyrax)   5 5
Loxodonta_africana_76_3   (African savanna elephant)   14 14
Echinops_telfairi_76   (Small Madagascar hedgehog)   5 5
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   8 8
Macropus_eugenii_76_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   12 12
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   9 9
Ornithorhynchus_anatinus_76_5   (Platypus)   6 6
Saccoglossus_kowalevskii_v3.0 23 21
Petromyzon_marinus_76_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_76_2   (Turkey)   5 5
Gallus_gallus_76_4   (Chicken)   6 6
Anas_platyrhynchos_76_1.0   (Mallard)   6 6
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   5 5
Ficedula_albicollis_76_1.0   (Collared flycatcher)   6 6
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   15 14
Anolis_carolinensis_76_2.0   (Green anole)   3 3
Xenopus_laevis_   (African clawed frog)   10 10
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   10 10
Latimeria_chalumnae_76_1   (Coelacanth)   7 7
Lepisosteus_oculatus_76   (Spotted gar)   8 8
Gadus_morhua_76_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   5 5
Takifugu_rubripes_76_4   (Torafugu)   10 10
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   7 7
Oryzias_latipes_76_1   (Japanese medaka)   15 15
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   9 9
Poecilia_formosa_76   (Amazon molly)   9 9
Oreochromis_niloticus_76_1.0   (Nile tilapia)   8 8
Astyanax_mexicanus_76   (Mexican tetra)   11 11
Danio_rerio_76_9   (Zebrafish)   18 18
Oikopleura_dioica 13 13
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   9 9
Ciona_intestinalis_76   (Vase tunicate)   4 4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   28 28
Adineta_vaga 17 17
Octopus_bimaculoides_280 7 7
Crassostrea_gigas_22   (Pacific oyster)   8 8
Lottia_gigantea_   (Owl limpet)   6 6
Helobdella_robusta_ 4 4
Capitella_sp._I_ 9 8
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1 1
Heliconius_melpomene_   (Postman butterfly)   5 5
Bombyx_mori_   (Domestic silkworm)   3 3
Nasonia_vitripennis_   (Jewel wasp)   1 1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3 3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   4 4
Linepithema_humile_v1.1   (Argentine ant)   5 4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3 3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4 4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   5 4
Atta_cephalotes_v1.1 3 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   8 7
Lucilia_cuprina   (Australian sheep blowfly)   4 4
Drosophila_grimshawi_1.3 6 5
Drosophila_willistoni_1.3 9 9
Drosophila_pseudoobscura_2.13 8 8
Drosophila_persimilis_1.3 5 5
Drosophila_suzukii 8 8
Drosophila_yakuba_1.3 7 7
Drosophila_simulans_1.3 3 3
Drosophila_sechellia_1.3 6 6
Drosophila_melanogaster_76_5   (Fruit fly)   12 12
Drosophila_erecta_1.3 10 10
Drosophila_ananassae_1.3 4 4
Drosophila_virilis_1.2 4 4
Drosophila_mojavensis_1.3 6 6
Megaselia_scalaris_22 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   5 5
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   4 4
Anopheles_darlingi_22   (American malaria mosquito)   2 2
Anopheles_gambiae_49_3j   (African malaria mosquito)   6 6
Tribolium_castaneum_3.0   (Red flour beetle)   4 4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   7 7
Rhodnius_prolixus_22 5 5
Daphnia_pulex_   (Common water flea)   6 6
Strigamia_maritima_22 5 5
Sarcoptes_scabiei 4 3
Tetranychus_urticae_   (Two-spotted spider mite)   4 4
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3 3
Pristionchus_pacificus_ 7 7
Meloidogyne_incognita_   (Southern root-knot nematode)   4 4
Meloidogyne_hapla_ 2 2
Onchocerca_volvulus_22 6 6
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   4 4
Caenorhabditis_japonica_ 7 7
Caenorhabditis_brenneri_ 8 8
Caenorhabditis_remanei_ 9 9
Caenorhabditis_elegans_76_235   (Roundworm)   9 9
Caenorhabditis_briggsae_2 7 7
Trichinella_spiralis_22 5 5
Hymenolepis_microstoma_ 3 3
Echinococcus_multilocularis_ 3 3
Echinococcus_granulosus_ 1 1
Taenia_solium_   (Pork tapeworm)   3 3
Schistosoma_mansoni_ 6 6
Mnemiopsis_leidyi   (Sea walnut)   7 7
Thelohanellus_kitauei 2 2
Acropora_digitifera_v1.0 11 11
Nematostella_vectensis_1.0   (Starlet sea anemone)   7 7
Hydra_vulgaris 3 3
Amphimedon_queenslandica 3 3
Trichoplax_adhaerens_ 16 16
Proterospongia_sp._ATCC_50818_ 18 18
Monosiga_brevicollis_ 2 2
Sphaeroforma_arctica_JP610_ 1 1
Capsaspora_owczarzaki_ATCC_30864_ 4 4
Conidiobolus_coronatus_NRRL28638_v1.0 3 3
Mortierella_verticillata_NRRL_6337_ 1 1
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 3 3
Mucor_circinelloides_ 3 3
Rhizomucor_miehei_CAU432_ 3 3
Malassezia_globosa_CBS_7966_ 6 6
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3 3
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2 2
Melampsora_laricis-populina_ 2 2
Rhodotorula_graminis_WP1_v1.0 3 3
Sporobolomyces_roseus_IAM_13481_ 3 3
Microbotryum_violaceum_22 4 4
Wallemia_sebi_v1.0 3 3
Sphaerobolus_stellatus_v1.0 3 3
Piloderma_croceum_F_1598_v1.0 6 6
Serpula_lacrymans_var._lacrymans_S7.9_ 4 4
Coniophora_puteana 9 9
Hydnomerulius_pinastri_v2.0 7 7
Paxillus_rubicundulus_Ve08.2h10_v1.0 8 8
Pisolithus_microcarpus_441_v1.0 4 4
Pisolithus_tinctorius_Marx_270_v1.0 6 6
Scleroderma_citrinum_Foug_A_v1.0 3 3
Coprinopsis_cinerea_okayama7_130_v3 5 5
Pleurotus_ostreatus_   (Oyster mushroom)   6 6
Amanita_thiersii_Skay4041_v1.0 5 5
Amanita_muscaria_Koide_v1.0   (Fly agaric)   12 12
Galerina_marginata_v1.0 3 3
Hebeloma_cylindrosporum_h7_v2.0 10 10
Laccaria_bicolor_S238N-H82_ 10 10
Agaricus_bisporus_var._bisporus_ 5 5
Schizophyllum_commune_ 7 7
Stereum_hirsutum_FP-91666_SS1__v1.0 5 5
Heterobasidion_annosum_ 3 3
Gloeophyllum_trabeumv1.0 9 9
Punctularia_strigosozonata_v1.0 3 2
Sebacina_vermifera_MAFF_305830_v1.0 6 6
Fomitiporia_mediterranea_v1.0 3 3
Tulasnella_calospora_AL13/4D_v1.0 14 14
Postia_placenta_ 5 5
Wolfiporia_cocos_MD-104_SS10__v1.0 2 2
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 3 3
Dichomitus_squalens 4 4
Trametes_versicolor_v1.0 6 6
Tremella_mesenterica_   (Witches' butter)   3 3
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 3 3
Magnaporthe_poae_ATCC_64411_22 2 2
Magnaporthe_grisea_70-15_ 4 4
Podospora_anserina_ 2 2
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 4 4
Chaetomium_globosum_CBS_148.51_ 4 4
Neurospora_tetrasperma_ 3 3
Neurospora_discreta_FGSC_8579_ 3 3
Neurospora_crassa_OR74A_ 3 3
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 3
Verticillium_albo-atrum_VaMs.102_ 2 2
Verticillium_dahliae_VdLs.17_ 3 3
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 4 4
Fusarium_graminearum_ 5 5
Nectria_haematococca_mpVI_ 5 5
Fusarium_oxysporum_f._sp._lycopersici_4286_ 6 6
Fusarium_verticillioides_7600_ 4 4
Trichoderma_asperellum_CBS_433.97_v1.0 7 7
Trichoderma_atroviride_ 7 7
Trichoderma_citrinoviride_v1.0 6 6
Trichoderma_reesei_1.2 3 3
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 3
Trichoderma_harzianum_CBS_226.95_v1.0 3 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   3 3
Botrytis_cinerea_B05.10_ 3 3
Sclerotinia_sclerotiorum_ 2 2
Didymella_exigua_CBS_183.55_v1.0 4 4
Leptosphaeria_maculans_22 5 5
Setosphaeria_turcica_v1.0 6 6
Cochliobolus_miyabeanus_ATCC_44560_v1.0 5 5
Cochliobolus_victoriae_FI3_v1.0 5 5
Cochliobolus_carbonum_26-R-13_v1.0 2 2
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 3
Alternaria_brassicicola_ 3 3
Cochliobolus_lunatus_m118_v2.0 4 4
Pyrenophora_teres_f._teres_22 6 6
Pyrenophora_tritici-repentis_ 3 3
Stagonospora_nodorum_ 4 4
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 1 1
Dothistroma_septosporum 3 3
Septoria_musiva_v1.0 1 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3 3
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 3 3
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 3 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 6 6
Trichophyton_equinum_CBS_127.97_ 3 3
Trichophyton_verrucosum_HKI_0517_ 4 4
Arthroderma_benhamiae_CBS_112371_ 2 2
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 4 4
Aspergillus_zonatus_v1.0 4 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 3 3
Penicillium_chrysogenum_v1.0 3 3
Aspergillus_acidus_v1.0 4 4
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 4 4
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_glaucus 5 5
Aspergillus_carbonarius_ITEM_5010_ 3 3
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 3 3
Aspergillus_tubingensis_v1.0 4 4
Aspergillus_wentii_v1.0 4 4
Aspergillus_oryzae_RIB40_ 4 4
Aspergillus_niger_22 4 4
Aspergillus_niger_ATCC_1015_ 5 5
Aspergillus_flavus_NRRL3357_ 5 5
Aspergillus_clavatus_NRRL_1_ 5 5
Penicillium_marneffei_ATCC_18224_ 3 3
Tuber_melanosporum_Mel28_22 7 7
Tuber_melanosporum_Vittad_   (Perigord truffle)   7 7
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 3 3
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3 3
Candida_dubliniensis_CD36_ 3 3
Candida_tropicalis_MYA-3404_ 4 4
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 5 5
Lodderomyces_elongisporus_NRRL_YB-4239_ 3 3
Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 3
Pichia_stipitis_CBS_6054_ 3 3
Candida_guilliermondii_ATCC_6260_ 4 4
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 4 4
Debaromyces_hansenii 4 4
Wickerhamomyces_anomalus 1 1
Pichia_pastoris_GS115_ 4 4
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2 2
Yarrowia_lipolytica_CLIB122 5 5
Candida_lusitaniae_ATCC_42720_ 2 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 3
Vanderwaltozyma_polyspora_DSM_70294_ 4 4
Candida_glabrata_CBS138 2 2
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 4 4
Kluyveromyces_waltii 4 4
Ashbya_gossypii_ATCC_10895_ 5 5
Zygosaccharomyces_rouxii_ 5 5
Saccharomyces_mikatae_MIT 2 2
Saccharomyces_paradoxus_MIT 5 5
Saccharomyces_cerevisiae_76   (Baker's yeast)   4 4
Saccharomyces_bayanus_MIT 2 2
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_japonicus_yFS275_ 5 5
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 7 7
Allomyces_macrogynus_ATCC_38327_ 13 13
Spizellomyces_punctatus_DAOM_BR117_ 3 3
Dictyostelium_discoideum 3 3
Dictyostelium_purpureum_ 7 7
Entamoeba_dispar_1.2 2 2
Entamoeba_invadens_1.2 4 4
Entamoeba_histolytica_1 5 5
Selaginella_moellendorffii_ 13 13
Pinus_taeda   (Loblolly pine)   8 8
Picea_abies   (Norway spruce)   2 2
Eucalyptus_grandis_v201   (Rose gum)   18 18
Theobroma_cacao_B97-61/B2_v1   (Cacao)   5 5
Gossypium_raimondii_v221 14 14
Citrus_clementina_v165 4 4
Citrus_sinensis_v154   (Sweet orange)   11 11
Thellungiella_halophila_v173 5 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8 8
Capsella_rubella_v183 5 5
Arabidopsis_lyrata_   (Lyrate rockcress)   5 5
Arabidopsis_thaliana_10   (Thale cress)   4 4
Carica_papaya_   (Papaya)   8 8
Medicago_truncatula_   (Barrel medic)   11 11
Phaseolus_vulgaris_v186   (French bean)   11 11
Glycine_max_v109   (Soybean)   17 17
Cucumis_sativus_v122   (Cucumber)   3 3
Fragaria_vesca_   (Wild strawberry)   7 7
Malus_domestica_v196   (Apple)   13 13
Prunus_persica_v139   (Peach)   5 5
Linum_usitatissimum_v200   (Flax)   6 6
Manihot_esculenta_v147   (Cassava)   8 8
Populus_trichocarpa_v156   (Black cottonwood)   6 6
Vitis_vinifera_   (Wine grape)   5 5
Mimulus_guttatus_v140   (Spotted monkey flower)   6 6
Solanum_lycopersicum_v.2.3   (Tomato)   6 6
Solanum_tuberosum_   (Potato)   8 8
Actinidia_chinensis_Hongyang_ 12 12
Aquilegia_coerulea_v195 11 11
Triticum_urartu_22 8 8
Triticum_aestivum_22   (Bread wheat)   20 20
Aegilops_tauschii_22 8 8
Brachypodium_distachyon_   (Stiff brome)   11 11
Oryza_barthii_22   (African wild rice)   6 6
Oryza_meridionalis_22 15 15
Oryza_glumaepatula_22 18 18
Oryza_glaberrima   (African rice)   10 10
Oryza_punctata_22 10 10
Oryza_nivara_22 20 20
Oryza_brachyantha_22   (Malo sina)   8 8
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   15 15
Oryza_sativa_v193   (Rice)   15 15
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   6 6
Panicum_virgatum_v202   (Switchgrass)   23 23
Setaria_italica_v164   (Foxtail millet)   18 18
Zea_mays_subsp._mays_   (Maize)   17 17
Zea_mays_v181   (Maize)   20 20
Sorghum_bicolor_   (Sorghum)   8 8
Musa_balbisiana   (Balbis banana)   7 7
Musa_acuminata_22   (Wild Malaysian banana)   11 11
Amborella_trichopoda_22 3 3
Physcomitrella_patens 14 14
Coccomyxa_subellipsoidea_sp._C-169_v2 3 3
Asterochloris_sp._Cgr/DA1pho_v1.0 8 8
Chlorella_vulgaris_ 2 2
Volvox_carteri_f._nagariensis_ 4 4
Volvox_carteri_v199 6 6
Chlamydomonas_reinhardtii_4.0 6 6
Ostreococcus_lucimarinus_CCE9901_ 3 3
Ostreococcus_tauri_ 4 4
Bathycoccus_prasinos_ 3 3
Micromonas_sp._RCC299_ 9 9
Micromonas_pusilla_CCMP1545_v3.0 4 4
Cyanidioschyzon_merolae_strain_10D_22 3 3
Cyanidioschyzon_merolae 3 3
Porphyridium_purpureum_02_2012 4 4
Thecamonas_trahens_ATCC_50062_ 6 6
Bigelowiella_natans_CCMP2755_22 7 7
Giardia_lamblia_2.3 7 7
Cyanophora_paradoxa_ 6 6
Leishmania_mexicana_2.4 4 4
Leishmania_major_strain_Friedlin_ 3 3
Leishmania_infantum_JPCM5_2.4 4 4
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 4 4
Trypanosoma_vivax_ 6 6
Trypanosoma_cruzi_strain_CL_Brener 5 5
Trypanosoma_congolense_2.4 6 6
Trypanosoma_brucei_gambiense_v4.1 12 12
Trypanosoma_brucei_TREU927_v4.1 10 10
Ectocarpus_siliculosus 4 4
Aureococcus_anophagefferens_ 6 6
Albugo_laibachii_22 9 9
Pythium_iwayamai_DAOM_BR242034_22 3 3
Pythium_arrhenomanes_ATCC_12531_22 6 6
Pythium_ultimum_v1.7-2 2 2
Pythium_aphanidermatum_DAOM_BR444_22 6 5
Pythium_irregulare_DAOM_BR486_22 6 5
Pythium_vexans_DAOM_BR484_22 6 6
Phytophthora_ramorum_1.1   (Sudden oak death agent)   6 6
Phytophthora_sojae_1.1 5 5
Phytophthora_infestans_T30-4_ 4 4
Phytophthora_capsici_ 4 4
Hyaloperonospora_arabidopsidis_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 2 2
Perkinsus_marinus_ATCC_50983_ 4 4
Paramecium_tetraurelia_ 21 21
Tetrahymena_thermophila_SB210_1_ 55 55
Ichthyophthirius_multifiliis_strain_G5_ 3 3
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 2 2
Neospora_caninum 4 4
Toxoplasma_gondii_VEG 2 2
Toxoplasma_gondii_ME49 1 1
Toxoplasma_gondii_GT1 1 1
Babesia_bovis_T2Bo_ 6 6
Plasmodium_falciparum_3D7_ 2 2
Plasmodium_vivax_SaI-1_7.0 3 3
Plasmodium_knowlesi_strain_H_ 3 3
Plasmodium_yoelii_ssp._yoelii_1_ 4 4
Plasmodium_chabaudi_ 2 2
Plasmodium_berghei_ANKA_ 2 2
Symbiodinium_minutum_clade_B1_v1.2 7 7
Naegleria_gruberi_ 7 7
Trichomonas_vaginalis_ 19 19
Guillardia_theta_CCMP2712_v1.0_ 10 8
Emiliania_huxleyi_CCMP1516_ 8 8
Pseudanabaena_sp._PCC_7367 1 1
Thermosynechococcus_sp._NK55 1 1
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_7502 1 1
Synechococcus_sp._PCC_6312 1 1
Prochlorococcus_marinus_str._MIT_9515 1 1
Trichodesmium_erythraeum_IMS101 1 1
Halothece_sp._PCC_7418 1 1
Gloeobacter_violaceus_PCC_7421 1 1
Rivularia_sp._PCC_7116 2 2
Calothrix_sp._PCC_7507 1 1
Nostoc_sp._PCC_7524 1 1
Conexibacter_woesei_DSM_14684 1 1
Ilumatobacter_coccineus 2 2
Thermobispora_bispora_DSM_43833 1 1
Modestobacter_marinus 1 1
Kineococcus_radiotolerans_SRS30216 1 1
Stackebrandtia_nassauensis_DSM_44728 2 2
Frankia_sp._EAN1pec 2 2
Frankia_alni_ACN14a 1 1
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 2 2
Kitasatospora_setae_KM-6054 2 2
Streptomyces_coelicolor_A3(2) 1 1
Streptomyces_sp._PAMC26508 2 2
Streptomyces_flavogriseus_ATCC_33331 2 2
Streptomyces_sp._SirexAA-E 1 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1
Streptomyces_bingchenggensis_BCW-1 3 3
Streptomyces_violaceusniger_Tu_4113 2 2
Streptomyces_avermitilis_MA-4680 2 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_scabiei_87.22 2 2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1 1
Actinosynnema_mirum_DSM_43827 4 4
Saccharomonospora_viridis_DSM_43017 1 1
Pseudonocardia_dioxanivorans_CB1190 1 1
Saccharopolyspora_erythraea_NRRL_2338 2 2
Amycolatopsis_mediterranei_U32 1 1
Kribbella_flavida_DSM_17836 1 1
Propionibacterium_propionicum_F0230a 3 3
Propionibacterium_acnes_SK137 1 1
Salinispora_arenicola_CNS-205 1 1
Verrucosispora_maris_AB-18-032 1 1
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 1 1
Actinoplanes_sp._SE50/110 1 1
Actinoplanes_missouriensis_431 3 3
Segniliparus_rotundus_DSM_44985 1 1
Gordonia_polyisoprenivorans_VH2 2 2
Rhodococcus_jostii_RHA1 1 1
Nocardia_cyriacigeorgica_GUH-2 1 1
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_massiliense_str._GO_06 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Microbacterium_testaceum_StLB037 1 1
Arthrobacter_phenanthrenivorans_Sphe3 1 1
Arthrobacter_chlorophenolicus_A6 1 1
Arthrobacter_aurescens_TC1 1 1
Arthrobacter_sp._Rue61a 2 2
Arthrobacter_sp._FB24 1 1
Renibacterium_salmoninarum_ATCC_33209 1 1
Anaerolinea_thermophila_UNI-1 1 1
Thermomicrobium_roseum_DSM_5159 1 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Herpetosiphon_aurantiacus_DSM_785 3 3
Chloroflexus_sp._Y-400-fl 1 1
Deinococcus_deserti_VCD115 1 1
Deinococcus_maricopensis_DSM_21211 1 1
Deinococcus_geothermalis_DSM_11300 1 1
Oceanithermus_profundus_DSM_14977 1 1
Meiothermus_silvanus_DSM_9946 1 1
Acidaminococcus_intestini_RyC-MR95 1 1
Acidaminococcus_fermentans_DSM_20731 1 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 1 1
Ethanoligenens_harbinense_YUAN-3 1 1
Oscillibacter_valericigenes_Sjm18-20 1 1
butyrate-producing_bacterium_SS3/4 1 1
Desulfosporosinus_orientis_DSM_765 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Clostridium_phytofermentans_ISDg 1 1
Clostridium_lentocellum_DSM_5427 1 1
Eubacterium_rectale_ATCC_33656 1 1
Roseburia_hominis_A2-183 1 1
Heliobacterium_modesticaldum_Ice1 1 1
Clostridium_cellulovorans_743B 2 2
Thermosediminibacter_oceani_DSM_16646 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_owensensis_OL 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Coprothermobacter_proteolyticus_DSM_5265 1 1
Thermoanaerobacter_tengcongensis_MB4 1 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 1 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1 1
Oenococcus_oeni_PSU-1 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Paenibacillus_sp._JDR-2 2 2
Paenibacillus_mucilaginosus_3016 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Candidatus_Cloacamonas_acidaminovorans 1 1
Gemmatimonas_aurantiaca_T-27 2 2
Ignavibacterium_album_JCM_16511 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Haliscomenobacter_hydrossis_DSM_1100 3 2
Niastella_koreensis_GR20-10 2 2
Chitinophaga_pinensis_DSM_2588 4 4
Salinibacter_ruber_M8 1 1
Rhodothermus_marinus_DSM_4252 2 2
Flexibacter_litoralis_DSM_6794 3 2
Candidatus_Amoebophilus_asiaticus_5a2 2 2
Belliella_baltica_DSM_15883 1 1
Cyclobacterium_marinum_DSM_745 1 1
Fibrella_aestuarina 1 1
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 1 1
Cytophaga_hutchinsonii_ATCC_33406 3 3
Spirosoma_linguale_DSM_74 2 2
Runella_slithyformis_DSM_19594 1 1
Odoribacter_splanchnicus_DSM_20712 1 1
Bacteroides_salanitronis_DSM_18170 1 1
Bacteroides_vulgatus_ATCC_8482 2 2
Bacteroides_thetaiotaomicron_VPI-5482 3 3
Sphingobacterium_sp._21 1 1
Owenweeksia_hongkongensis_DSM_17368 1 1
Zunongwangia_profunda_SM-A87 1 1
Krokinobacter_sp._4H-3-7-5 2 2
Gramella_forsetii_KT0803 3 3
Lacinutrix_sp._5H-3-7-4 1 1
Robiginitalea_biformata_HTCC2501 1 1
Aequorivita_sublithincola_DSM_14238 1 1
Zobellia_galactanivorans 2 2
Cellulophaga_algicola_DSM_14237 2 2
Cellulophaga_lytica_DSM_7489 1 1
Capnocytophaga_canimorsus_Cc5 1 1
Flavobacterium_johnsoniae_UW101 2 2
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Phycisphaera_mikurensis_NBRC_102666 1 1
Isosphaera_pallida_ATCC_43644 4 4
Planctomyces_brasiliensis_DSM_5305 1 1
Planctomyces_limnophilus_DSM_3776 3 3
Rhodopirellula_baltica_SH_1 3 3
Coraliomargarita_akajimensis_DSM_45221 2 2
Opitutus_terrae_PB90-1 2 2
Anaerobaculum_mobile_DSM_13181 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 1 1
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_hyodysenteriae_WA1 1 1
Borrelia_turicatae_91E135 1 1
Borrelia_hermsii_DAH 1 1
Treponema_azotonutricium_ZAS-9 2 2
Treponema_primitia_ZAS-2 1 1
Treponema_brennaborense_DSM_12168 2 2
Treponema_succinifaciens_DSM_2489 1 1
Treponema_denticola_ATCC_35405 1 1
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 2 2
Fervidobacterium_nodosum_Rt17-B1 1 1
Thermosipho_africanus_TCF52B 1 1
Thermotoga_thermarum_DSM_5069 1 1
Thermovibrio_ammonificans_HB-1 1 1
Sulfurihydrogenibium_azorense_Az-Fu1 1 1
Hydrogenobaculum_sp._SN 1 1
Hydrogenobaculum_sp._HO 1 1
Hydrogenobaculum_sp._Y04AAS1 1 1
Candidatus_Solibacter_usitatus_Ellin6076 5 5
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Bacteriovorax_marinus_SJ 1 1
Bdellovibrio_bacteriovorus_HD100 1 1
Campylobacter_curvus_525.92 1 1
Desulfurivibrio_alkaliphilus_AHT2 1 1
Desulfatibacillum_alkenivorans_AK-01 2 2
Geobacter_sp._M21 1 1
Geobacter_lovleyi_SZ 1 1
Babela_massiliensis 2 2
Haliangium_ochraceum_DSM_14365 4 4
Sorangium_cellulosum_'So_ce_56' 5 5
Stigmatella_aurantiaca_DW4/3-1 1 1
Corallococcus_coralloides_DSM_2259 4 4
Myxococcus_fulvus_HW-1 1 1
Pseudogulbenkiania_sp._NH8B 1 1
Chromobacterium_violaceum_ATCC_12472 1 1
Burkholderia_rhizoxinica_HKI_454 1 1
Burkholderia_thailandensis_E264 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 1 1
Caulobacter_sp._K31 1 1
Sphingobium_sp._SYK-6 1 1
Hirschia_baltica_ATCC_49814 1 1
Pseudovibrio_sp._FO-BEG1 1 1
Roseobacter_denitrificans_OCh_114 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Acidiphilium_multivorum_AIU301 1 1
Acidiphilium_cryptum_JF-5 1 1
Gluconobacter_oxydans_621H 1 1
Acetobacter_pasteurianus_IFO_3283-01 1 1
Rhizobium_etli_CIAT_652 1 1
Agrobacterium_radiobacter_K84 1 1
Hyphomicrobium_sp._MC1 1 1
Cellvibrio_japonicus_Ueda107 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_splendidus_LGP32 1 1
Vibrio_anguillarum_775 1 1
Vibrio_furnissii_NCTC_11218 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Photobacterium_profundum_SS9 1 1
Shewanella_piezotolerans_WP3 3 3
Shewanella_loihica_PV-4 1 1
Shewanella_halifaxensis_HAW-EB4 1 1
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_denitrificans_OS217 1 1
Shewanella_oneidensis_MR-1 2 2
Shewanella_woodyi_ATCC_51908 3 3
Shewanella_sp._MR-4 1 1
Shewanella_violacea_DSS12 1 1
Colwellia_psychrerythraea_34H 1 1
Glaciecola_nitratireducens_FR1064 1 1
Marinobacter_adhaerens_HP15 1 1
Hahella_chejuensis_KCTC_2396 4 4
Marinomonas_posidonica_IVIA-Po-181 1 1
Marinomonas_sp._MWYL1 2 2
Xanthomonas_albilineans_GPE_PC73 1 1
Xenorhabdus_nematophila_ATCC_19061 1 1
Proteus_mirabilis_HI4320 1 1
Yersinia_pseudotuberculosis_IP_31758 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1
Erwinia_tasmaniensis_Et1/99 1 1
Shigella_sonnei_Ss046 1 1
Enterobacter_sp._R4-368 2 2
Pseudomonas_sp._UW4 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 2 2
Pseudomonas_entomophila_L48 1 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1 1
Psychrobacter_sp._PRwf-1 1 1
Francisella_cf._novicida_3523 1 1
Cenarchaeum_symbiosum_A 1 1
Ignisphaera_aggregans_DSM_17230 1 1
Ignicoccus_hospitalis_KIN4/I 1 1
Desulfurococcus_fermentans_DSM_16532 1 1
Desulfurococcus_mucosus_DSM_2162 1 1
Sulfolobus_islandicus_Y.N.15.51 2 2
Sulfolobus_solfataricus_P2 2 2
Vulcanisaeta_moutnovskia_768-28 1 1
Pyrobaculum_sp._1860 1 1
Pyrobaculum_arsenaticum_DSM_13514 1 1
Pyrobaculum_oguniense_TE7 1 1
Pyrobaculum_aerophilum_str._IM2 2 2
Thermoproteus_uzoniensis_768-20 1 1
halophilic_archaeon_DL31 1 1
Methanosarcina_acetivorans_C2A 2 2
Methanoculleus_bourgensis_MS2 2 2
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_barophilus_MP 1 1
Thermoplasma_volcanium_GSS1 1 1
Thermoplasma_acidophilum_DSM_1728 1 1
Picrophilus_torridus_DSM_9790 1 1
Halomicrobium_mukohataei_DSM_12286 1 1
Haloarcula_hispanica_ATCC_33960 1 1
Methanobrevibacter_smithii_ATCC_35061 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   12 12
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   7 7
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   7 7
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   5 5
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   7 7
Cryptococcus_neoformans_var._grubii_H99_ 6 6
Cryptococcus_neoformans_B-3501A_ 6 6
Cryptococcus_neoformans_JEC21_ 6 6
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 4 4
Coccidioides_immitis_RMSCC_3703_ 4 4
Coccidioides_immitis_RMSCC_2394_ 2 2
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H143 5 5
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 1 1
Candida_albicans_WO-1_ 3 3
Saccharomyces_cerevisiae_UC5 4 4
Saccharomyces_cerevisiae_PW5 3 3
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 2 2
Saccharomyces_cerevisiae_YJM269 4 4
Saccharomyces_cerevisiae_T7 4 4
Saccharomyces_cerevisiae_FostersB 5 5
Saccharomyces_cerevisiae_FostersO 3 3
Saccharomyces_cerevisiae_VL3 3 3
Saccharomyces_cerevisiae_Vin13 2 2
Saccharomyces_cerevisiae_LalvinQA23 3 3
Saccharomyces_cerevisiae_AWRI796 3 3
Saccharomyces_cerevisiae_Sigma1278b 3 3
Saccharomyces_cerevisiae_W303 4 4
Saccharomyces_cerevisiae_JAY291 2 2
Saccharomyces_cerevisiae_AWRI1631 2 2
Saccharomyces_cerevisiae_YPS163 2 2
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 3 3
Saccharomyces_cerevisiae_Y10 2 2
Saccharomyces_cerevisiae_YJM789_ 3 3
Saccharomyces_cerevisiae_YJM789 3 3
Saccharomyces_cerevisiae_RM11-1a 3 3
Saccharomyces_cerevisiae_RM11-1a_ 3 3
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   4 4
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 4 4
Batrachochytrium_dendrobatidis_JAM81_ 4 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   3 3
Hordeum_vulgare_22   (Domesticated barley)   12 12
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   8 8
Trypanosoma_brucei_Lister_427_v4.1 11 11
Neospora_caninum_Nc-Liverpool_6.2 4 4
Plasmodium_falciparum_HB3_ 2 2
Plasmodium_falciparum_Dd2_ 2 2
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._JA-3-3Ab 1 1
Prochlorococcus_marinus_str._AS9601 1 1
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 1 1
Prochlorococcus_marinus_str._MIT_9215 1 1
Crinalium_epipsammum_PCC_9333 2 2
Oscillatoria_acuminata_PCC_6304 1 1
Arthrospira_platensis_NIES-39 2 2
Cyanothece_sp._PCC_7822 4 4
Cyanothece_sp._ATCC_51142 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Anabaena_cylindrica_PCC_7122 1 1
Frankia_sp._EuI1c 2 2
Nocardiopsis_alba_ATCC_BAA-2165 5 5
Streptomyces_albus_J1074 1 1
Streptomyces_rapamycinicus_NRRL_5491 2 2
Streptomyces_davawensis_JCM_4913 1 1
Streptomyces_fulvissimus_DSM_40593 3 3
Streptomyces_venezuelae_ATCC_10712 4 4
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1 1
Saccharothrix_espanaensis_DSM_44229 1 1
Amycolatopsis_mediterranei_RB 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_orientalis_HCCB10007 1 1
Propionibacterium_acnes_TypeIA2_P.acn31 1 1
Propionibacterium_acnes_TypeIA2_P.acn17 1 1
Propionibacterium_acnes_TypeIA2_P.acn33 2 2
Propionibacterium_acnes_C1 1 1
Propionibacterium_acnes_HL096PA1 1 1
Propionibacterium_acnes_266 1 1
Propionibacterium_acnes_KPA171202 1 1
Propionibacterium_acidipropionici_ATCC_4875 1 1
Actinoplanes_friuliensis_DSM_7358 1 1
Nocardia_brasiliensis_ATCC_700358 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Corynebacterium_diphtheriae_HC04 1 1
Corynebacterium_diphtheriae_HC03 1 1
Thermus_oshimai_JL-2 1 1
Erysipelothrix_rhusiopathiae_SY1027 1 1
Faecalibacterium_prausnitzii_L2-6 1 1
Coprococcus_catus_GD/7 1 1
Clostridium_sp._SY8519 1 1
Clostridium_botulinum_E3_str._Alaska_E43 2 2
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_str._Zhang 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1
Paenibacillus_sp._Y412MC10 2 2
Paenibacillus_mucilaginosus_KNP414 1 1
Paenibacillus_mucilaginosus_K02 2 2
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_M7 1 1
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2540 1 1
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_L99 1 1
Listeria_monocytogenes_HCC23 1 1
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_infantis_NRRL_B-14911 3 3
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_F837/76 1 1
Salinibacter_ruber_DSM_13855 1 1
Rhodothermus_marinus_SG0.5JP17-172 1 1
Prevotella_sp._oral_taxon_299_str._F0039 1 1
Prevotella_dentalis_DSM_3688 1 1
Bacteroides_xylanisolvens_XB1A 3 3
Bacteroides_fragilis_638R 2 2
Nonlabens_dokdonensis_DSW-6 1 1
Leptospira_interrogans_serovar_Lai_str._56601 1 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1 1
Treponema_pedis_str._T_A4 2 2
Bdellovibrio_exovorus_JSS 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 2 2
Desulfobacula_toluolica_Tol2 1 1
Sorangium_cellulosum_So0157-2 2 2
Neisseria_meningitidis_M01-240355 1 1
Ralstonia_solanacearum_CMR15 2 2
Burkholderia_sp._CCGE1003 1 1
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_cepacia_GG4 1 1
Variovorax_paradoxus_B4 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Acetobacter_pasteurianus_386B 1 1
Acetobacter_pasteurianus_IFO_3283-12 1 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1 1
Acetobacter_pasteurianus_IFO_3283-32 1 1
Acetobacter_pasteurianus_IFO_3283-26 1 1
Acetobacter_pasteurianus_IFO_3283-22 1 1
Acetobacter_pasteurianus_IFO_3283-07 1 1
Acetobacter_pasteurianus_IFO_3283-03 1 1
Sinorhizobium_meliloti_2011 1 1
Sinorhizobium_meliloti_1021 1 1
Rhizobium_tropici_CIAT_899 1 1
Mesorhizobium_australicum_WSM2073 1 1
Bradyrhizobium_japonicum_USDA_6 1 1
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1 1
Vibrio_vulnificus_CMCP6 1 1
Vibrio_vulnificus_YJ016 1 1
Shewanella_sp._ANA-3 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS117 1 1
Shewanella_baltica_OS195 1 1
Shewanella_baltica_OS155 1 1
Shewanella_sp._MR-7 1 1
Shewanella_putrefaciens_200 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alcanivorax_dieselolei_B5 1 1
Dickeya_dadantii_Ech586 1 1
Cronobacter_sakazakii_SP291 1 1
Shigella_sonnei_53G 1 1
Escherichia_coli_E24377A 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_P12b 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_O157:H7_str._TW14359 1 1
Escherichia_coli_O157:H7_str._EDL933 1 1
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_stutzeri_CCUG_29243 1 1
Pseudomonas_stutzeri_RCH2 1 1
Pseudomonas_monteilii_SB3101 1 1
Pseudomonas_monteilii_SB3078 1 1
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 1 1
Pseudomonas_putida_DOT-T1E 1 1
Pseudomonas_putida_S16 1 1
Pseudomonas_putida_ND6 1 1
Pseudomonas_fluorescens_F113 1 1
Pseudomonas_fluorescens_A506 2 2
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_fluorescens_Pf0-1 1 1
Pseudomonas_aeruginosa_SCV20265 1 1
Pseudomonas_aeruginosa_MTB-1 1 1
Pseudomonas_aeruginosa_LES431 1 1
Pseudomonas_aeruginosa_PA1R 1 1
Pseudomonas_aeruginosa_PA1 1 1
Pseudomonas_aeruginosa_NCGM2.S1 1 1
Pseudomonas_aeruginosa_LESB58 1 1
Sulfolobus_islandicus_LAL14/1 1 1
Sulfolobus_islandicus_Y.G.57.14 2 2
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_M.16.27 1 1
Sulfolobus_islandicus_M.14.25 1 1
Sulfolobus_islandicus_M.16.4 1 1
Sulfolobus_islandicus_L.D.8.5 1 1
Sulfolobus_solfataricus_98/2 2 2
Sulfolobus_acidocaldarius_SUSAZ 1 1
Sulfolobus_acidocaldarius_Ron12/I 1 1
Sulfolobus_acidocaldarius_N8 1 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 1 1
Thermococcus_sp._AM4 1 1
Ferroplasma_acidarmanus_fer1 2 2
Natronococcus_occultus_SP4 1 1
Natronobacterium_gregoryi_SP2 1 1
Natronomonas_moolapensis_8.8.11 2 2
Haloarcula_hispanica_N601 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   9 9
Pan_troglodytes_69_2.1.4   (Chimpanzee)   3 3
Gorilla_gorilla_69_3.1   (Western gorilla)   6 6
Pongo_abelii_69_2   (Sumatran orangutan)   11 11
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   9 9
Macaca_mulatta_69_1   (Rhesus monkey)   7 7
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   7 7
Otolemur_garnettii_69_3   (Small-eared galago)   8 8
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   7 7
Mus_musculus_69_38   (House mouse)   7 7
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   4 4
Cavia_porcellus_69_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_69_2   (Rabbit)   6 6
Ochotona_princeps_69   (American pika)   2 2
Tupaia_belangeri_69   (Northern tree shrew)   1 1
Sus_scrofa_69_10.2   (Pig)   5 5
Bos_taurus_69_3.1   (Cattle)   8 8
Vicugna_pacos_69_1   (Alpaca)   3 3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   6 6
Mustela_putorius_furo_69_1.0   (Domestic ferret)   7 7
Ailuropoda_melanoleuca_69_1   (Giant panda)   6 6
Canis_familiaris_69_3.1   (Dog)   7 7
Felis_catus_69   (Domestic cat)   2 2
Equus_caballus_69_2   (Horse)   7 7
Myotis_lucifugus_69_2.0   (Little brown bat)   10 10
Pteropus_vampyrus_69_1   (Large flying fox)   6 6
Erinaceus_europaeus_69   (Western European hedgehog)   2 2
Procavia_capensis_69_1   (Cape rock hyrax)   5 5
Loxodonta_africana_69_3   (African savanna elephant)   11 11
Echinops_telfairi_69   (Small Madagascar hedgehog)   5 5
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   2 2
Macropus_eugenii_69_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   10 10
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   9 9
Ornithorhynchus_anatinus_69_5   (Platypus)   6 6
Petromyzon_marinus_69_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_69_2   (Turkey)   5 5
Gallus_gallus_69_2   (Chicken)   4 4
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   5 5
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   8 8
Anolis_carolinensis_69_2.0   (Green anole)   3 3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   6 6
Latimeria_chalumnae_69_1   (Coelacanth)   7 7
Gadus_morhua_69_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   4 4
Takifugu_rubripes_69_4   (Torafugu)   7 7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   6 6
Oryzias_latipes_69_1   (Japanese medaka)   9 9
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   9 9
Oreochromis_niloticus_69_1.0   (Nile tilapia)   6 6
Danio_rerio_69_9   (Zebrafish)   10 10
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   6 6
Ciona_intestinalis_69   (Vase tunicate)   4 4
Drosophila_melanogaster_69_5   (Fruit fly)   7 7
Caenorhabditis_elegans_69_215   (Roundworm)   6 6
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   4 4
Arabidopsis_thaliana_10   (Thale cress)   4 4

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   27 27
Homo_sapiens__(NCBI_version)   (Human)   11 11
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   6 6
Heliconius_numata__(Incomplete) 2 2
Loa_loa_v3.3_(Request)   (Eye worm)   5 5
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   3 3
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2 2
Moniliophthora_perniciosa_FA553__(Genome_survey) 3 3
Encephalitozoon_intestinalis__(endoparasite) 1 1
Encephalitozoon_cuniculi_(endoparasite) 2 2
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1 1
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   13 13
Ricinus_communis__(Early_assembly)   (Castor bean)   5 5
Nicotiana_benthamiana_0.4.4_(Early_draft) 10 10
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   6 6
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   6 6
Phoenix_dactylifera__(Early_draft)   (Date palm)   5 5
Guillardia_theta_(nucleomorph) 1 1
NCBI_plasmid_sequences_(Plasmids) 12 12
STRING_v9.0.5_(STRING) 867 866
UniProt__viral_sequences_(Viral) 3 3
Uniprot_2018_03_genome 15289 15208
NCBI_2017_08_genome 20634 20569
PDB_chains_(SCOP_1.75)_(PDB) 2 2
NCBI_viral_sequences_(Viral) 24 24
Protein_Data_Bank_(all_PDB_sequenc) 34 34
Core_Eukaryotic_Genes_458_(CEGMA) 1 1
TargetDB__(Targets) 35 35
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 86 86
Protozoadb_2010_08_(Protozoadb) 123 123

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