SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for E set domains superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a E set domains domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   735 340
Pan_troglodytes_76_2.1.4   (Chimpanzee)   193 99
Gorilla_gorilla_76_3.1   (Western gorilla)   336 142
Pongo_abelii_76_2   (Sumatran orangutan)   259 105
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   203 104
Papio_anubis_76   (Olive baboon)   290 119
Macaca_mulatta_76_1   (Rhesus monkey)   421 155
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   528 224
Otolemur_garnettii_76_3   (Small-eared galago)   221 100
Microcebus_murinus_76_1   (Gray mouse lemur)   189 89
Rattus_norvegicus_76_5.0   (Norway rat)   254 124
Mus_musculus_76_38   (House mouse)   524 246
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   190 82
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   223 103
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   218 107
Cavia_porcellus_76_3   (Domestic guinea pig)   230 114
Oryctolagus_cuniculus_76_2   (Rabbit)   231 104
Ochotona_princeps_76   (American pika)   174 80
Tupaia_belangeri_76   (Northern tree shrew)   150 69
Sus_scrofa_76_10.2   (Pig)   190 113
Bos_taurus_76_3.1   (Cattle)   220 110
Ovis_aries_76_3.1   (Sheep)   245 115
Vicugna_pacos_76_1   (Alpaca)   106 59
Tursiops_truncatus_76_1   (Bottlenose dolphin)   197 96
Mustela_putorius_furo_76_1.0   (Domestic ferret)   220 101
Ailuropoda_melanoleuca_76_1   (Giant panda)   232 108
Canis_familiaris_76_3.1   (Dog)   294 120
Felis_catus_76_6.2   (Domestic cat)   246 105
Equus_caballus_76_2   (Horse)   328 121
Myotis_lucifugus_76_2.0   (Little brown bat)   262 107
Pteropus_vampyrus_76_1   (Large flying fox)   208 93
Sorex_araneus_76_1   (European shrew)   133 69
Erinaceus_europaeus_76   (Western European hedgehog)   166 75
Procavia_capensis_76_1   (Cape rock hyrax)   179 83
Loxodonta_africana_76_3   (African savanna elephant)   331 143
Echinops_telfairi_76   (Small Madagascar hedgehog)   160 77
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   257 114
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   99 58
Macropus_eugenii_76_1.0   (Tammar wallaby)   187 85
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   243 110
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   213 94
Ornithorhynchus_anatinus_76_5   (Platypus)   207 101
Saccoglossus_kowalevskii_v3.0 393 268
Petromyzon_marinus_76_7.0   (Sea lamprey)   149 58
Meleagris_gallopavo_76_2   (Turkey)   168 96
Gallus_gallus_76_4   (Chicken)   146 89
Anas_platyrhynchos_76_1.0   (Mallard)   143 93
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   162 90
Ficedula_albicollis_76_1.0   (Collared flycatcher)   170 94
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   184 104
Anolis_carolinensis_76_2.0   (Green anole)   180 94
Xenopus_laevis_   (African clawed frog)   236 178
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   255 136
Latimeria_chalumnae_76_1   (Coelacanth)   282 121
Lepisosteus_oculatus_76   (Spotted gar)   339 123
Gadus_morhua_76_1   (Atlantic cod)   292 161
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   404 156
Takifugu_rubripes_76_4   (Torafugu)   998 387
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   366 168
Oryzias_latipes_76_1   (Japanese medaka)   306 147
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   274 132
Poecilia_formosa_76   (Amazon molly)   289 146
Oreochromis_niloticus_76_1.0   (Nile tilapia)   391 190
Astyanax_mexicanus_76   (Mexican tetra)   297 150
Danio_rerio_76_9   (Zebrafish)   490 239
Oikopleura_dioica 94 42
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   333 108
Ciona_intestinalis_76   (Vase tunicate)   101 53
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   249 143
Adineta_vaga 368 150
Octopus_bimaculoides_280 258 103
Crassostrea_gigas_22   (Pacific oyster)   235 101
Lottia_gigantea_   (Owl limpet)   182 86
Helobdella_robusta_ 301 76
Capitella_sp._I_ 178 107
Danaus_plexippus_OGS1.0   (Monarch butterfly)   104 62
Heliconius_melpomene_   (Postman butterfly)   94 59
Bombyx_mori_   (Domestic silkworm)   86 59
Nasonia_vitripennis_   (Jewel wasp)   119 58
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   366 117
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   112 56
Linepithema_humile_v1.1   (Argentine ant)   99 55
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   105 53
Solenopsis_invicta_v.2.2.3   (Red fire ant)   55 41
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   105 50
Atta_cephalotes_v1.1 101 53
Camponotus_floridanus_v3.3   (Florida carpenter ant)   109 53
Lucilia_cuprina   (Australian sheep blowfly)   143 70
Drosophila_grimshawi_1.3 129 69
Drosophila_willistoni_1.3 129 66
Drosophila_pseudoobscura_2.13 133 69
Drosophila_persimilis_1.3 114 64
Drosophila_suzukii 155 68
Drosophila_yakuba_1.3 140 74
Drosophila_simulans_1.3 116 63
Drosophila_sechellia_1.3 134 72
Drosophila_melanogaster_76_5   (Fruit fly)   398 147
Drosophila_erecta_1.3 130 68
Drosophila_ananassae_1.3 136 70
Drosophila_virilis_1.2 127 68
Drosophila_mojavensis_1.3 127 70
Megaselia_scalaris_22 68 43
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   193 116
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   157 110
Anopheles_darlingi_22   (American malaria mosquito)   85 60
Anopheles_gambiae_49_3j   (African malaria mosquito)   156 77
Tribolium_castaneum_3.0   (Red flour beetle)   119 65
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   99 47
Acyrthosiphon_pisum_   (Pea aphid)   106 48
Rhodnius_prolixus_22 91 55
Daphnia_pulex_   (Common water flea)   139 69
Strigamia_maritima_22 102 50
Sarcoptes_scabiei 79 44
Tetranychus_urticae_   (Two-spotted spider mite)   124 78
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   101 57
Pristionchus_pacificus_ 90 42
Meloidogyne_incognita_   (Southern root-knot nematode)   58 33
Meloidogyne_hapla_ 50 26
Onchocerca_volvulus_22 94 33
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   192 45
Caenorhabditis_japonica_ 87 48
Caenorhabditis_brenneri_ 141 74
Caenorhabditis_remanei_ 132 64
Caenorhabditis_elegans_76_235   (Roundworm)   485 114
Caenorhabditis_briggsae_2 110 55
Trichinella_spiralis_22 102 41
Hymenolepis_microstoma_ 67 21
Echinococcus_multilocularis_ 66 23
Echinococcus_granulosus_ 66 23
Taenia_solium_   (Pork tapeworm)   56 25
Schistosoma_mansoni_ 86 33
Mnemiopsis_leidyi   (Sea walnut)   118 45
Thelohanellus_kitauei 44 41
Acropora_digitifera_v1.0 203 137
Nematostella_vectensis_1.0   (Starlet sea anemone)   164 97
Hydra_vulgaris 102 52
Amphimedon_queenslandica 336 162
Trichoplax_adhaerens_ 138 69
Proterospongia_sp._ATCC_50818_ 159 32
Monosiga_brevicollis_ 239 29
Sphaeroforma_arctica_JP610_ 42 35
Capsaspora_owczarzaki_ATCC_30864_ 37 26
Conidiobolus_coronatus_NRRL28638_v1.0 31 29
Mortierella_verticillata_NRRL_6337_ 60 60
Phycomyces_blakesleeanus_ 49 43
Rhizopus_oryzae_RA_99-880_ 48 46
Mucor_circinelloides_ 56 51
Rhizomucor_miehei_CAU432_ 38 35
Malassezia_globosa_CBS_7966_ 22 22
Sporisorium_reilianum_22 21 20
Ustilago_maydis_ 21 20
Mixia_osmundae_IAM_14324_v1.0 18 18
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 17 17
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 17 17
Melampsora_laricis-populina_ 19 19
Rhodotorula_graminis_WP1_v1.0 19 19
Sporobolomyces_roseus_IAM_13481_ 17 17
Microbotryum_violaceum_22 28 28
Wallemia_sebi_v1.0 13 13
Sphaerobolus_stellatus_v1.0 23 23
Piloderma_croceum_F_1598_v1.0 20 19
Serpula_lacrymans_var._lacrymans_S7.9_ 17 17
Coniophora_puteana 23 23
Hydnomerulius_pinastri_v2.0 23 23
Paxillus_rubicundulus_Ve08.2h10_v1.0 18 18
Pisolithus_microcarpus_441_v1.0 19 19
Pisolithus_tinctorius_Marx_270_v1.0 17 17
Scleroderma_citrinum_Foug_A_v1.0 18 18
Coprinopsis_cinerea_okayama7_130_v3 19 19
Pleurotus_ostreatus_   (Oyster mushroom)   27 27
Amanita_thiersii_Skay4041_v1.0 21 21
Amanita_muscaria_Koide_v1.0   (Fly agaric)   17 17
Galerina_marginata_v1.0 39 39
Hebeloma_cylindrosporum_h7_v2.0 24 24
Laccaria_bicolor_S238N-H82_ 36 36
Agaricus_bisporus_var._bisporus_ 23 23
Schizophyllum_commune_ 17 17
Stereum_hirsutum_FP-91666_SS1__v1.0 29 29
Heterobasidion_annosum_ 19 19
Gloeophyllum_trabeumv1.0 21 21
Punctularia_strigosozonata_v1.0 33 33
Sebacina_vermifera_MAFF_305830_v1.0 23 23
Fomitiporia_mediterranea_v1.0 18 18
Tulasnella_calospora_AL13/4D_v1.0 21 21
Postia_placenta_ 31 31
Wolfiporia_cocos_MD-104_SS10__v1.0 26 26
Fomitopsis_pinicolav1.0 21 21
Fomitopsis_pinicola_FP-58527_SS1_v3.0 21 21
Phanerochaete_chrysosporium_RP-78_2.1 25 25
Dichomitus_squalens 28 28
Trametes_versicolor_v1.0 31 31
Tremella_mesenterica_   (Witches' butter)   15 15
Daldinia_eschscholzii_EC12_v1.0 19 19
Apiospora_montagnei_NRRL_25634_v1.0 20 20
Magnaporthe_poae_ATCC_64411_22 16 16
Magnaporthe_grisea_70-15_ 21 21
Podospora_anserina_ 19 18
Sporotrichum_thermophile_ATCC_42464_ 14 14
Thielavia_terrestris_NRRL_8126_ 18 17
Chaetomium_globosum_CBS_148.51_ 15 15
Neurospora_tetrasperma_ 16 16
Neurospora_discreta_FGSC_8579_ 19 19
Neurospora_crassa_OR74A_ 20 19
Cryphonectria_parasitica_   (Chestnut blight fungus)   12 12
Verticillium_albo-atrum_VaMs.102_ 17 17
Verticillium_dahliae_VdLs.17_ 20 20
Acremonium_alcalophilumv_1.0 18 17
Glomerella_graminicola_22 22 22
Fusarium_graminearum_ 21 21
Nectria_haematococca_mpVI_ 24 24
Fusarium_oxysporum_f._sp._lycopersici_4286_ 21 21
Fusarium_verticillioides_7600_ 22 22
Trichoderma_asperellum_CBS_433.97_v1.0 20 19
Trichoderma_atroviride_ 17 17
Trichoderma_citrinoviride_v1.0 19 18
Trichoderma_reesei_1.2 18 18
Trichoderma_virens_Gv29-8_ 18 18
Trichoderma_longibrachiatum_ATCC_18648_v1.0 18 18
Trichoderma_harzianum_CBS_226.95_v1.0 19 18
Amorphotheca_resinae_v1.0   (Creosote fungus)   19 19
Botrytis_cinerea_B05.10_ 22 22
Sclerotinia_sclerotiorum_ 19 19
Blumeria_graminis_22 17 17
Didymella_exigua_CBS_183.55_v1.0 24 24
Leptosphaeria_maculans_22 20 20
Setosphaeria_turcica_v1.0 25 25
Cochliobolus_miyabeanus_ATCC_44560_v1.0 26 26
Cochliobolus_victoriae_FI3_v1.0 25 25
Cochliobolus_carbonum_26-R-13_v1.0 26 26
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   24 24
Alternaria_brassicicola_ 23 23
Cochliobolus_lunatus_m118_v2.0 22 22
Pyrenophora_teres_f._teres_22 24 24
Pyrenophora_tritici-repentis_ 23 23
Stagonospora_nodorum_ 24 24
Mycosphaerella_graminicola_IPO323_ 18 18
Zasmidium_cellare_ATCC_36951_v1.0 27 27
Dothistroma_septosporum 25 25
Septoria_musiva_v1.0 21 21
Mycosphaerella_fijiensis_CIRAD86_ 21 21
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 22 22
Paracoccidioides_brasiliensis_Pb18_ 18 18
Coccidioides_posadasii_RMSCC_3488_ 17 17
Coccidioides_immitis_RS_ 18 18
Ajellomyces_dermatitidis_SLH14081_ 16 16
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 12 12
Microsporum_canis_CBS_113480_ 19 19
Trichophyton_equinum_CBS_127.97_ 16 16
Trichophyton_verrucosum_HKI_0517_ 18 18
Arthroderma_benhamiae_CBS_112371_ 19 19
Trichophyton_tonsurans_CBS_112818_ 17 17
Trichophyton_rubrum_CBS_118892_ 17 17
Uncinocarpus_reesii_1704_ 15 15
Aspergillus_zonatus_v1.0 17 17
Penicillium_chrysogenum_Wisconsin_54-1255_ 19 19
Penicillium_chrysogenum_v1.0 21 21
Aspergillus_acidus_v1.0 21 21
Aspergillus_fumigatus_Af293 18 18
Aspergillus_brasiliensis_v1.0 20 20
Aspergillus_nidulans_FGSC_A4_ 20 20
Aspergillus_sydowii_v1.0 23 23
Aspergillus_versicolor_v1.0 20 20
Aspergillus_glaucus 22 22
Aspergillus_carbonarius_ITEM_5010_ 20 20
Neosartorya_fischeri_NRRL_181_ 22 22
Aspergillus_terreus_NIH2624_ 20 20
Aspergillus_tubingensis_v1.0 20 20
Aspergillus_wentii_v1.0 25 25
Aspergillus_oryzae_RIB40_ 19 19
Aspergillus_niger_22 20 20
Aspergillus_niger_ATCC_1015_ 10 10
Aspergillus_flavus_NRRL3357_ 22 22
Aspergillus_clavatus_NRRL_1_ 20 20
Penicillium_marneffei_ATCC_18224_ 25 25
Tuber_melanosporum_Mel28_22 16 16
Tuber_melanosporum_Vittad_   (Perigord truffle)   17 17
Hansenula_polymorpha_v2.0 14 14
Dekkera_bruxellensis_CBS_2499_v2.0 12 12
Pichia_membranifaciensv1.0 13 13
Candida_tanzawaensis_NRRL_Y-17324__v1.0 16 16
Candida_dubliniensis_CD36_ 18 18
Candida_tropicalis_MYA-3404_ 17 17
Candida_parapsilosis_ 16 16
Candida_albicans_SC5314 18 18
Lodderomyces_elongisporus_NRRL_YB-4239_ 13 13
Babjeviella_inositovora_NRRL_Y-12698_v1.0 20 20
Pichia_stipitis_CBS_6054_ 17 17
Candida_guilliermondii_ATCC_6260_ 15 15
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 20 19
Debaromyces_hansenii 16 16
Wickerhamomyces_anomalus 18 18
Pichia_pastoris_GS115_ 13 13
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 7 7
Yarrowia_lipolytica_CLIB122 19 19
Candida_lusitaniae_ATCC_42720_ 14 14
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 15 15
Vanderwaltozyma_polyspora_DSM_70294_ 15 15
Candida_glabrata_CBS138 16 16
Kluyveromyces_thermotolerans_CBS_6340 17 17
Lachancea_kluyveri_ 14 14
Kluyveromyces_waltii 16 16
Ashbya_gossypii_ATCC_10895_ 14 14
Zygosaccharomyces_rouxii_ 14 14
Saccharomyces_mikatae_MIT 16 15
Saccharomyces_paradoxus_MIT 18 17
Saccharomyces_cerevisiae_76   (Baker's yeast)   18 17
Saccharomyces_bayanus_MIT 18 17
Kluyveromyces_lactis 13 13
Schizosaccharomyces_cryophilus_OY26_22 13 13
Schizosaccharomyces_octosporus_yFS286_ 13 13
Schizosaccharomyces_japonicus_yFS275_ 11 11
Schizosaccharomyces_pombe   (Fission yeast)   14 14
Catenaria_anguillulae_PL171_v1.0 16 15
Allomyces_macrogynus_ATCC_38327_ 29 27
Spizellomyces_punctatus_DAOM_BR117_ 36 33
Dictyostelium_discoideum 239 132
Dictyostelium_purpureum_ 146 99
Entamoeba_dispar_1.2 39 25
Entamoeba_invadens_1.2 46 26
Entamoeba_histolytica_1 37 26
Selaginella_moellendorffii_ 97 73
Pinus_taeda   (Loblolly pine)   50 48
Picea_abies   (Norway spruce)   38 37
Eucalyptus_grandis_v201   (Rose gum)   63 62
Theobroma_cacao_B97-61/B2_v1   (Cacao)   48 46
Gossypium_raimondii_v221 234 221
Citrus_clementina_v165 64 61
Citrus_sinensis_v154   (Sweet orange)   133 127
Thellungiella_halophila_v173 65 63
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   86 84
Capsella_rubella_v183 53 51
Arabidopsis_lyrata_   (Lyrate rockcress)   51 49
Arabidopsis_thaliana_10   (Thale cress)   71 69
Carica_papaya_   (Papaya)   38 36
Medicago_truncatula_   (Barrel medic)   119 112
Phaseolus_vulgaris_v186   (French bean)   69 67
Glycine_max_v109   (Soybean)   121 117
Cucumis_sativus_v122   (Cucumber)   72 71
Fragaria_vesca_   (Wild strawberry)   53 50
Malus_domestica_v196   (Apple)   94 92
Prunus_persica_v139   (Peach)   46 44
Linum_usitatissimum_v200   (Flax)   92 88
Manihot_esculenta_v147   (Cassava)   64 61
Populus_trichocarpa_v156   (Black cottonwood)   72 69
Vitis_vinifera_   (Wine grape)   41 40
Mimulus_guttatus_v140   (Spotted monkey flower)   48 46
Solanum_lycopersicum_v.2.3   (Tomato)   63 61
Solanum_tuberosum_   (Potato)   60 60
Actinidia_chinensis_Hongyang_ 74 72
Aquilegia_coerulea_v195 111 110
Triticum_urartu_22 36 34
Triticum_aestivum_22   (Bread wheat)   107 99
Aegilops_tauschii_22 36 35
Brachypodium_distachyon_   (Stiff brome)   64 60
Oryza_barthii_22   (African wild rice)   68 63
Oryza_meridionalis_22 64 57
Oryza_glumaepatula_22 85 78
Oryza_glaberrima   (African rice)   40 37
Oryza_punctata_22 72 67
Oryza_nivara_22 75 70
Oryza_brachyantha_22   (Malo sina)   41 40
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   72 70
Oryza_sativa_v193   (Rice)   72 70
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   48 46
Panicum_virgatum_v202   (Switchgrass)   93 90
Setaria_italica_v164   (Foxtail millet)   62 61
Zea_mays_subsp._mays_   (Maize)   77 76
Zea_mays_v181   (Maize)   90 87
Sorghum_bicolor_   (Sorghum)   51 46
Musa_balbisiana   (Balbis banana)   59 58
Musa_acuminata_22   (Wild Malaysian banana)   66 63
Amborella_trichopoda_22 41 39
Physcomitrella_patens 76 75
Coccomyxa_subellipsoidea_sp._C-169_v2 28 24
Asterochloris_sp._Cgr/DA1pho_v1.0 23 20
Chlorella_variabilis_sp._NC64A_ 30 27
Chlorella_vulgaris_ 34 24
Volvox_carteri_f._nagariensis_ 63 41
Volvox_carteri_v199 61 40
Chlamydomonas_reinhardtii_4.0 58 48
Ostreococcus_sp._RCC809_ 81 27
Ostreococcus_lucimarinus_CCE9901_ 72 30
Ostreococcus_tauri_ 84 27
Bathycoccus_prasinos_ 44 18
Micromonas_sp._RCC299_ 84 36
Micromonas_pusilla_CCMP1545_v3.0 107 43
Cyanidioschyzon_merolae_strain_10D_22 11 11
Cyanidioschyzon_merolae 11 11
Porphyridium_purpureum_02_2012 32 28
Thecamonas_trahens_ATCC_50062_ 95 66
Bigelowiella_natans_CCMP2755_22 76 36
Giardia_lamblia_2.3 5 5
Cyanophora_paradoxa_ 174 99
Leishmania_mexicana_2.4 6 6
Leishmania_major_strain_Friedlin_ 6 6
Leishmania_infantum_JPCM5_2.4 6 6
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 7 7
Trypanosoma_vivax_ 7 7
Trypanosoma_cruzi_strain_CL_Brener 7 7
Trypanosoma_congolense_2.4 7 7
Trypanosoma_brucei_gambiense_v4.1 6 6
Trypanosoma_brucei_TREU927_v4.1 6 6
Ectocarpus_siliculosus 129 30
Aureococcus_anophagefferens_ 62 20
Albugo_laibachii_22 66 26
Pythium_iwayamai_DAOM_BR242034_22 76 30
Pythium_arrhenomanes_ATCC_12531_22 92 29
Pythium_ultimum_v1.7-2 112 33
Pythium_aphanidermatum_DAOM_BR444_22 42 28
Pythium_irregulare_DAOM_BR486_22 58 30
Pythium_vexans_DAOM_BR484_22 38 23
Phytophthora_ramorum_1.1   (Sudden oak death agent)   37 27
Phytophthora_sojae_1.1 66 32
Phytophthora_infestans_T30-4_ 89 35
Phytophthora_capsici_ 33 25
Hyaloperonospora_arabidopsidis_22 15 13
Phaeodactylum_tricornutumCCAP_1055/1 14 14
Fragilariopsis_cylindrus 29 28
Thalassiosira_pseudonana_CCMP1335 66 16
Perkinsus_marinus_ATCC_50983_ 38 27
Paramecium_tetraurelia_ 115 73
Tetrahymena_thermophila_SB210_1_ 72 48
Ichthyophthirius_multifiliis_strain_G5_ 16 13
Cryptosporidium_hominis 7 7
Cryptosporidium_muris 12 10
Cryptosporidium_parvum_Iowa_II 10 9
Neospora_caninum 18 15
Toxoplasma_gondii_VEG 15 13
Toxoplasma_gondii_ME49 19 15
Toxoplasma_gondii_GT1 14 11
Babesia_bovis_T2Bo_ 12 12
Theileria_parva__ 7 6
Theileria_annulata 6 5
Plasmodium_falciparum_3D7_ 9 6
Plasmodium_vivax_SaI-1_7.0 9 6
Plasmodium_knowlesi_strain_H_ 9 6
Plasmodium_yoelii_ssp._yoelii_1_ 7 5
Plasmodium_chabaudi_ 8 6
Plasmodium_berghei_ANKA_ 8 6
Symbiodinium_minutum_clade_B1_v1.2 98 73
Naegleria_gruberi_ 40 29
Trichomonas_vaginalis_ 34 32
Guillardia_theta_CCMP2712_v1.0_ 366 109
Emiliania_huxleyi_CCMP1516_ 42 27
Thermobaculum_terrenum_ATCC_BAA-798 6 5
Leptolyngbya_sp._PCC_7376 2 1
Pseudanabaena_sp._PCC_7367 9 6
Acaryochloris_marina_MBIC11017 5 4
Synechocystis_sp._PCC_6803 5 4
Thermosynechococcus_sp._NK55 2 1
Thermosynechococcus_elongatus_BP-1 2 1
Synechococcus_sp._PCC_7502 4 3
Synechococcus_sp._PCC_6312 5 4
Synechococcus_sp._CC9311 3 2
Synechococcus_elongatus_PCC_7942 3 2
Prochlorococcus_marinus_str._MIT_9515 3 2
Microcoleus_sp._PCC_7113 9 8
Trichodesmium_erythraeum_IMS101 6 5
Geitlerinema_sp._PCC_7407 4 3
Cyanothece_sp._PCC_8802 9 8
Gloeocapsa_sp._PCC_7428 4 3
Halothece_sp._PCC_7418 5 3
Microcystis_aeruginosa_NIES-843 4 3
Gloeobacter_violaceus_PCC_7421 32 20
Rivularia_sp._PCC_7116 9 8
Calothrix_sp._PCC_7507 4 3
Anabaena_variabilis_ATCC_29413 6 5
'Nostoc_azollae'_0708 2 1
Nostoc_sp._PCC_7107 6 5
Nostoc_punctiforme_PCC_73102 10 9
Nostoc_sp._PCC_7120 6 5
Nostoc_sp._PCC_7524 4 3
Anabaena_sp._90 2 1
Mycoplasma_crocodyli_MP145 1 1
Mycoplasma_mobile_163K 1 1
Mycoplasma_fermentans_M64 1 1
Mycoplasma_pulmonis_UAB_CTIP 1 1
Mycoplasma_hyorhinis_GDL-1 1 1
Mycoplasma_gallisepticum_str._F 1 1
Conexibacter_woesei_DSM_14684 5 5
Eggerthella_sp._YY7918 4 4
Eggerthella_lenta_DSM_2243 11 11
Slackia_heliotrinireducens_DSM_20476 5 5
Atopobium_parvulum_DSM_20469 2 2
Rubrobacter_xylanophilus_DSM_9941 5 5
Ilumatobacter_coccineus 7 7
Thermobispora_bispora_DSM_43833 5 4
Nakamurella_multipartita_DSM_44233 15 13
Acidothermus_cellulolyticus_11B 6 5
Modestobacter_marinus 9 8
Blastococcus_saxobsidens_DD2 12 11
Geodermatophilus_obscurus_DSM_43160 10 9
Kineococcus_radiotolerans_SRS30216 11 10
Catenulispora_acidiphila_DSM_44928 25 19
Stackebrandtia_nassauensis_DSM_44728 9 9
Frankia_symbiont_of_Datisca_glomerata 8 7
Frankia_sp._EAN1pec 10 9
Frankia_alni_ACN14a 10 9
Thermobifida_fusca_YX 7 6
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 11 10
Thermomonospora_curvata_DSM_43183 8 7
Streptosporangium_roseum_DSM_43021 24 22
Kitasatospora_setae_KM-6054 18 16
Streptomyces_coelicolor_A3(2) 22 21
Streptomyces_sp._PAMC26508 16 14
Streptomyces_flavogriseus_ATCC_33331 17 15
Streptomyces_sp._SirexAA-E 19 17
Streptomyces_griseus_subsp._griseus_NBRC_13350 20 19
Streptomyces_bingchenggensis_BCW-1 33 22
Streptomyces_violaceusniger_Tu_4113 32 20
Streptomyces_avermitilis_MA-4680 30 18
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 11 10
Streptomyces_scabiei_87.22 23 20
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 27 17
Actinosynnema_mirum_DSM_43827 20 18
Saccharomonospora_viridis_DSM_43017 1 1
Pseudonocardia_dioxanivorans_CB1190 10 9
Saccharopolyspora_erythraea_NRRL_2338 7 7
Amycolatopsis_mediterranei_U32 20 19
Kribbella_flavida_DSM_17836 13 12
Nocardioides_sp._JS614 7 6
Propionibacterium_propionicum_F0230a 4 4
Propionibacterium_acnes_SK137 3 3
Microlunatus_phosphovorus_NM-1 12 11
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 3 3
Salinispora_arenicola_CNS-205 8 8
Salinispora_tropica_CNB-440 10 9
Verrucosispora_maris_AB-18-032 19 17
Micromonospora_sp._L5 25 23
Micromonospora_aurantiaca_ATCC_27029 25 23
Actinoplanes_sp._N902-109 38 27
Actinoplanes_sp._SE50/110 42 37
Actinoplanes_missouriensis_431 33 30
Segniliparus_rotundus_DSM_44985 3 3
Tsukamurella_paurometabola_DSM_20162 3 3
Gordonia_sp._KTR9 4 4
Gordonia_polyisoprenivorans_VH2 5 5
Gordonia_bronchialis_DSM_43247 7 7
Rhodococcus_jostii_RHA1 8 7
Rhodococcus_equi_103S 7 6
Rhodococcus_opacus_B4 11 10
Rhodococcus_erythropolis_PR4 9 8
Nocardia_cyriacigeorgica_GUH-2 5 5
Nocardia_farcinica_IFM_10152 7 7
Amycolicicoccus_subflavus_DQS3-9A1 8 6
Mycobacterium_massiliense_str._GO_06 4 3
Mycobacterium_abscessus_ATCC_19977 5 4
Mycobacterium_sp._JLS 8 7
Mycobacterium_intracellulare_ATCC_13950 7 6
Mycobacterium_avium_104 4 4
Mycobacterium_vanbaalenii_PYR-1 9 8
Mycobacterium_canettii_CIPT_140010059 5 4
Mycobacterium_africanum_GM041182 5 4
Mycobacterium_tuberculosis_KZN_1435 4 3
Mycobacterium_tuberculosis 5 4
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 5 4
Mycobacterium_rhodesiae_NBB3 8 7
Mycobacterium_ulcerans_Agy99 5 4
Mycobacterium_gilvum_PYR-GCK 10 9
Mycobacterium_chubuense_NBB4 9 8
Mycobacterium_marinum_M 6 5
Mycobacterium_smegmatis_str._MC2_155 7 6
Corynebacterium_resistens_DSM_45100 4 3
Corynebacterium_aurimucosum_ATCC_700975 3 3
Corynebacterium_kroppenstedtii_DSM_44385 4 3
Corynebacterium_efficiens_YS-314 7 6
Corynebacterium_ulcerans_0102 5 4
Corynebacterium_urealyticum_DSM_7109 1 1
Corynebacterium_jeikeium_K411 5 4
Corynebacterium_variabile_DSM_44702 5 4
Corynebacterium_pseudotuberculosis_316 5 4
Corynebacterium_glutamicum_R 7 6
Corynebacterium_diphtheriae_NCTC_13129 7 5
Tropheryma_whipplei_TW08/27 1 1
Sanguibacter_keddieii_DSM_10542 11 9
Kytococcus_sedentarius_DSM_20547 4 3
Beutenbergia_cavernae_DSM_12333 9 8
Leifsonia_xyli_subsp._xyli_str._CTCB07 9 8
Microbacterium_testaceum_StLB037 10 9
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 12 10
Jonesia_denitrificans_DSM_20603 7 6
Intrasporangium_calvum_DSM_43043 12 10
Brachybacterium_faecium_DSM_4810 9 7
Isoptericola_variabilis_225 10 8
Xylanimonas_cellulosilytica_DSM_15894 13 11
Cellulomonas_flavigena_DSM_20109 20 17
Cellulomonas_fimi_ATCC_484 20 16
[Cellvibrio]_gilvus_ATCC_13127 13 11
Arthrobacter_phenanthrenivorans_Sphe3 14 12
Arthrobacter_chlorophenolicus_A6 13 12
Arthrobacter_aurescens_TC1 13 12
Arthrobacter_arilaitensis_Re117 5 4
Kocuria_rhizophila_DC2201 6 5
Rothia_mucilaginosa_DY-18 1 1
Rothia_dentocariosa_ATCC_17931 2 2
Arthrobacter_sp._Rue61a 12 11
Arthrobacter_sp._FB24 14 12
Renibacterium_salmoninarum_ATCC_33209 11 8
Micrococcus_luteus_NCTC_2665 5 4
Gardnerella_vaginalis_409-05 5 4
Bifidobacterium_longum_subsp._longum_JDM301 5 4
Bifidobacterium_animalis_subsp._lactis_Bl-04 6 5
Bifidobacterium_dentium_Bd1 7 6
Bifidobacterium_breve_ACS-071-V-Sch8b 5 4
Bifidobacterium_bifidum_S17 4 3
Bifidobacterium_adolescentis_ATCC_15703 5 4
Arcanobacterium_haemolyticum_DSM_20595 4 4
Mobiluncus_curtisii_ATCC_43063 4 3
Actinomyces_sp._F0330 8 6
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 9 8
Anaerolinea_thermophila_UNI-1 2 2
Thermomicrobium_roseum_DSM_5159 3 3
Sphaerobacter_thermophilus_DSM_20745 8 8
Herpetosiphon_aurantiacus_DSM_785 18 16
Roseiflexus_sp._RS-1 11 7
Roseiflexus_castenholzii_DSM_13941 12 8
Chloroflexus_sp._MS-G 9 7
Chloroflexus_sp._Y-400-fl 11 9
Chloroflexus_aggregans_DSM_9485 11 9
Chloroflexus_aurantiacus_J-10-fl 12 10
Truepera_radiovictrix_DSM_17093 13 10
Deinococcus_gobiensis_I-0 6 6
Deinococcus_deserti_VCD115 10 9
Deinococcus_maricopensis_DSM_21211 6 5
Deinococcus_geothermalis_DSM_11300 6 6
Deinococcus_proteolyticus_MRP 3 3
Deinococcus_radiodurans_R1 7 6
Oceanithermus_profundus_DSM_14977 3 3
Marinithermus_hydrothermalis_DSM_14884 2 2
Meiothermus_silvanus_DSM_9946 13 11
Meiothermus_ruber_DSM_1279 8 8
Thermus_sp._CCB_US3_UF1 5 5
Thermus_scotoductus_SA-01 4 4
Thermus_thermophilus_HB27 3 3
Anaerococcus_prevotii_DSM_20548 4 4
Finegoldia_magna_ATCC_29328 2 2
Megasphaera_elsdenii_DSM_20460 2 2
Acidaminococcus_fermentans_DSM_20731 2 2
Megamonas_hypermegale 2 2
Selenomonas_sputigena_ATCC_35185 2 2
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 5 5
Natranaerobius_thermophilus_JW/NM-WN-LF 4 4
Clostridiales_genomosp._BVAB3_str._UPII9-5 3 3
Clostridium_clariflavum_DSM_19732 5 5
Eubacterium_siraeum 5 3
Clostridium_cellulolyticum_H10 11 9
Clostridium_thermocellum_ATCC_27405 9 8
Ethanoligenens_harbinense_YUAN-3 1 1
Faecalibacterium_prausnitzii 1 1
Ruminococcus_sp. 4 3
Ruminococcus_bromii 7 7
Ruminococcus_albus_7 7 7
Sulfobacillus_acidophilus_DSM_10332 2 2
Oscillibacter_valericigenes_Sjm18-20 1 1
butyrate-producing_bacterium_SS3/4 5 4
butyrate-producing_bacterium_SM4/1 3 3
Pelotomaculum_thermopropionicum_SI 1 1
Desulfosporosinus_acidiphilus_SJ4 6 6
Desulfosporosinus_orientis_DSM_765 5 5
Dehalobacter_sp._DCA 1 1
Dehalobacter_sp._CF 1 1
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfitobacterium_hafniense_Y51 1 1
Desulfitobacterium_dehalogenans_ATCC_51507 2 2
Desulfotomaculum_reducens_MI-1 3 3
Desulfotomaculum_acetoxidans_DSM_771 7 6
Desulfotomaculum_kuznetsovii_DSM_6115 2 2
Desulfotomaculum_carboxydivorans_CO-1-SRB 2 2
Desulfotomaculum_ruminis_DSM_2154 2 2
Acetobacterium_woodii_DSM_1030 2 2
Eubacterium_eligens_ATCC_27750 5 4
Eubacterium_limosum_KIST612 7 7
Clostridium_difficile_630 2 2
Clostridium_sticklandii_DSM_519 2 2
Clostridium_saccharolyticum_WM1 6 5
Clostridium_phytofermentans_ISDg 9 7
Clostridium_lentocellum_DSM_5427 27 15
[Ruminococcus]_obeum 6 5
[Ruminococcus]_torques 2 2
Eubacterium_rectale_M104/1 6 6
Eubacterium_rectale_ATCC_33656 7 6
Coprococcus_sp._ART55/1 7 5
Roseburia_hominis_A2-183 5 5
Roseburia_intestinalis 6 5
Butyrivibrio_proteoclasticus_B316 9 8
Butyrivibrio_fibrisolvens 3 3
Syntrophothermus_lipocalidus_DSM_12680 9 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 2
Heliobacterium_modesticaldum_Ice1 8 2
Alkaliphilus_oremlandii_OhILAs 5 1
Alkaliphilus_metalliredigens_QYMF 7 3
Clostridium_sp._BNL1100 13 10
Clostridium_novyi_NT 1 1
Clostridium_ljungdahlii_DSM_13528 2 2
Clostridium_kluyveri_DSM_555 1 1
Clostridium_beijerinckii_NCIMB_8052 4 4
Clostridium_tetani_E88 1 1
Clostridium_perfringens_ATCC_13124 6 5
Clostridium_cellulovorans_743B 23 17
Clostridium_botulinum_A_str._ATCC_3502 4 2
Clostridium_acetobutylicum_ATCC_824 8 3
Mahella_australiensis_50-1_BON 3 3
Caldicellulosiruptor_obsidiansis_OB47 5 5
Caldicellulosiruptor_kronotskyensis_2002 3 3
Caldicellulosiruptor_hydrothermalis_108 3 3
Caldicellulosiruptor_owensensis_OL 3 3
Caldicellulosiruptor_lactoaceticus_6A 3 3
Caldicellulosiruptor_kristjanssonii_177R1B 3 3
Caldicellulosiruptor_saccharolyticus_DSM_8903 3 3
Caldicellulosiruptor_bescii_DSM_6725 6 6
Thermoanaerobacterium_xylanolyticum_LX-11 13 4
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 13 3
Coprothermobacter_proteolyticus_DSM_5265 1 1
Tepidanaerobacter_acetatoxydans_Re1 4 1
Thermoanaerobacter_tengcongensis_MB4 13 2
Moorella_thermoacetica_ATCC_39073 3 3
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 3 3
Thermoanaerobacter_pseudethanolicus_ATCC_33223 3 3
Thermoanaerobacter_sp._X514 2 2
Thermoanaerobacter_italicus_Ab9 2 2
Thermoanaerobacter_wiegelii_Rt8.B1 13 3
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 3 3
Acetohalobium_arabaticum_DSM_5501 2 1
Halothermothrix_orenii_H_168 4 4
Halanaerobium_hydrogeniformans 2 2
Halanaerobium_praevalens_DSM_2228 2 2
Carnobacterium_sp._17-4 2 2
Carnobacterium_sp._WN1359 2 2
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Melissococcus_plutonius_DAT561 2 2
Enterococcus_sp._7L76 2 2
Enterococcus_hirae_ATCC_9790 3 3
Enterococcus_faecium_Aus0004 1 1
Enterococcus_faecalis_62 3 3
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_kefiranofaciens_ZW3 1 1
Lactobacillus_crispatus_ST1 1 1
Lactobacillus_rhamnosus_Lc_705 1 1
Lactobacillus_johnsonii_FI9785 1 1
Lactobacillus_salivarius_CECT_5713 3 3
Lactobacillus_ruminis_ATCC_27782 3 3
Lactobacillus_amylovorus_GRL1118 3 3
Lactobacillus_sakei_subsp._sakei_23K 1 1
Lactobacillus_gasseri_ATCC_33323 1 1
Lactobacillus_plantarum_JDM1 2 2
Lactobacillus_helveticus_DPC_4571 1 1
Lactobacillus_acidophilus_30SC 3 3
Pediococcus_claussenii_ATCC_BAA-344 1 1
Lactococcus_garvieae_ATCC_49156 3 3
Lactococcus_lactis_subsp._cremoris_MG1363 4 4
Streptococcus_sp._I-P16 5 5
Streptococcus_sp._I-G2 5 5
Streptococcus_intermedius_JTH08 5 5
Streptococcus_gallolyticus_UCN34 5 5
Streptococcus_pseudopneumoniae_IS7493 3 3
Streptococcus_pasteurianus_ATCC_43144 1 1
Streptococcus_equi_subsp._equi_4047 4 4
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 6 6
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Streptococcus_macedonicus_ACA-DC_198 1 1
Streptococcus_mitis_B6 4 4
Streptococcus_uberis_0140J 2 2
Streptococcus_parauberis_KCTC_11537 3 3
Streptococcus_parasanguinis_ATCC_15912 4 4
Streptococcus_pyogenes_str._Manfredo 1 1
Streptococcus_pneumoniae_P1031 4 4
Streptococcus_agalactiae_A909 4 4
Streptococcus_mutans_NN2025 2 2
Streptococcus_suis_P1/7 3 3
Streptococcus_sanguinis_SK36 5 5
Streptococcus_salivarius_57.I 3 3
Streptococcus_oralis_Uo5 4 4
Streptococcus_gordonii_str._Challis_substr._CH1 4 4
Exiguobacterium_sp._MH3 4 4
Exiguobacterium_sp._AT1b 3 3
Exiguobacterium_sibiricum_255-15 3 3
Kyrpidia_tusciae_DSM_2912 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 5 4
Brevibacillus_brevis_NBRC_100599 9 3
Paenibacillus_sp._JDR-2 17 11
Paenibacillus_terrae_HPL-003 8 6
Paenibacillus_mucilaginosus_3016 14 14
Paenibacillus_polymyxa_M1 6 5
Bacillus_selenitireducens_MLS10 6 5
Listeria_welshimeri_serovar_6b_str._SLCC5334 6 6
Listeria_innocua_Clip11262 11 11
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 14 14
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 17 17
Listeria_ivanovii_subsp._ivanovii_PAM_55 26 25
Solibacillus_silvestris_StLB046 4 3
Geobacillus_thermoglucosidasius_C56-YS93 2 2
Lysinibacillus_sphaericus_C3-41 3 3
Oceanobacillus_iheyensis_HTE831 6 6
Anoxybacillus_flavithermus_WK1 4 4
Geobacillus_thermoleovorans_CCB_US3_UF5 2 2
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 2 2
Geobacillus_sp._WCH70 1 1
Geobacillus_thermodenitrificans_NG80-2 2 2
Halobacillus_halophilus_DSM_2266 4 4
Bacillus_sp._JS 4 4
Bacillus_sp._1NLA3E 5 5
Bacillus_amyloliquefaciens_FZB42 2 2
Bacillus_atrophaeus_1942 4 4
Bacillus_subtilis_subsp._subtilis_str._168 4 4
Bacillus_licheniformis_DSM_13_=_ATCC_14580 5 5
Bacillus_halodurans_C-125 5 5
Bacillus_weihenstephanensis_KBAB4 11 10
Bacillus_thuringiensis_str._Al_Hakam 10 9
Bacillus_cereus_03BB102 8 8
Bacillus_anthracis_str._A0248 8 7
Bacillus_pseudofirmus_OF4 5 4
Bacillus_clausii_KSM-K16 2 2
Bacillus_cellulosilyticus_DSM_2522 6 5
Bacillus_pumilus_SAFR-032 2 2
Bacillus_megaterium_DSM_319 3 3
Bacillus_coagulans_2-6 1 1
Macrococcus_caseolyticus_JCSC5402 1 1
Staphylococcus_haemolyticus_JCSC1435 1 1
Candidatus_Cloacamonas_acidaminovorans 1 1
Gemmatimonas_aurantiaca_T-27 11 11
Melioribacter_roseus_P3M 8 8
Ignavibacterium_album_JCM_16511 14 14
Pelodictyon_phaeoclathratiforme_BU-1 2 2
Chlorobium_chlorochromatii_CaD3 1 1
Chlorobium_phaeobacteroides_DSM_266 1 1
Chlorobium_phaeovibrioides_DSM_265 1 1
Chlorobium_limicola_DSM_245 1 1
Chlorobaculum_parvum_NCIB_8327 1 1
Chlorobium_tepidum_TLS 1 1
Chloroherpeton_thalassium_ATCC_35110 2 2
Prosthecochloris_aestuarii_DSM_271 1 1
Haliscomenobacter_hydrossis_DSM_1100 26 22
Saprospira_grandis_str._Lewin 2 2
Niastella_koreensis_GR20-10 41 25
Chitinophaga_pinensis_DSM_2588 14 13
Salinibacter_ruber_M8 11 9
Rhodothermus_marinus_DSM_4252 7 7
Flexibacter_litoralis_DSM_6794 1 1
Belliella_baltica_DSM_15883 2 2
Cyclobacterium_marinum_DSM_745 3 3
Marivirga_tractuosa_DSM_4126 8 5
Fibrella_aestuarina 24 19
Leadbetterella_byssophila_DSM_17132 6 5
Dyadobacter_fermentans_DSM_18053 19 18
Cytophaga_hutchinsonii_ATCC_33406 8 8
Spirosoma_linguale_DSM_74 33 28
Runella_slithyformis_DSM_19594 16 16
Parabacteroides_distasonis_ATCC_8503 6 6
Tannerella_forsythia_ATCC_43037 5 5
Paludibacter_propionicigenes_WB4 21 19
Odoribacter_splanchnicus_DSM_20712 2 2
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1 1
Bacteroides_sp._CF50 4 4
Prevotella_melaninogenica_ATCC_25845 4 4
Prevotella_intermedia_17 2 2
Prevotella_denticola_F0289 4 4
Prevotella_ruminicola_23 12 11
Porphyromonas_asaccharolytica_DSM_20707 1 1
Porphyromonas_gingivalis_ATCC_33277 3 3
Alistipes_finegoldii_DSM_17242 3 3
Bacteroides_salanitronis_DSM_18170 10 10
Bacteroides_helcogenes_P_36-108 7 7
Bacteroides_vulgatus_ATCC_8482 4 4
Bacteroides_thetaiotaomicron_VPI-5482 21 21
Bacteroides_fragilis_YCH46 4 4
Pedobacter_saltans_DSM_12145 6 5
Solitalea_canadensis_DSM_3403 16 11
Pedobacter_heparinus_DSM_2366 6 6
Sphingobacterium_sp._21 8 8
Fluviicola_taffensis_DSM_16823 2 2
Zunongwangia_profunda_SM-A87 10 10
Krokinobacter_sp._4H-3-7-5 2 2
Gramella_forsetii_KT0803 3 3
Lacinutrix_sp._5H-3-7-4 5 5
Maribacter_sp._HTCC2170 5 5
Robiginitalea_biformata_HTCC2501 6 6
Croceibacter_atlanticus_HTCC2559 3 3
Zobellia_galactanivorans 7 7
Muricauda_ruestringensis_DSM_13258 8 6
Cellulophaga_algicola_DSM_14237 8 8
Cellulophaga_lytica_DSM_7489 4 4
Flavobacteriaceae_bacterium_3519-10 6 6
Polaribacter_sp._MED152 4 4
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1
Ornithobacterium_rhinotracheale_DSM_15997 2 2
Capnocytophaga_canimorsus_Cc5 3 3
Capnocytophaga_ochracea_DSM_7271 2 2
Weeksella_virosa_DSM_16922 1 1
Flavobacterium_indicum_GPTSA100-9 3 3
Flavobacterium_psychrophilum_JIP02/86 2 2
Flavobacterium_branchiophilum_FL-15 5 5
Flavobacterium_columnare_ATCC_49512 1 1
Flavobacterium_johnsoniae_UW101 5 5
Fibrobacter_succinogenes_subsp._succinogenes_S85 8 7
Waddlia_chondrophila_WSU_86-1044 4 4
Candidatus_Protochlamydia_amoebophila_UWE25 3 2
Parachlamydia_acanthamoebae_UV-7 3 2
Simkania_negevensis_Z 2 2
Chlamydophila_pecorum_E58 3 2
Chlamydia_muridarum_Nigg 3 2
Chlamydophila_pneumoniae_TW-183 3 2
Chlamydophila_caviae_GPIC 3 2
Chlamydophila_felis_Fe/C-56 3 2
Chlamydophila_abortus_S26/3 3 2
Chlamydia_psittaci_01DC11 3 2
Chlamydia_trachomatis_B/Jali20/OT 3 2
Phycisphaera_mikurensis_NBRC_102666 5 4
Isosphaera_pallida_ATCC_43644 8 7
Planctomyces_brasiliensis_DSM_5305 3 3
Planctomyces_limnophilus_DSM_3776 5 5
Rhodopirellula_baltica_SH_1 9 8
Pirellula_staleyi_DSM_6068 5 5
Methylacidiphilum_infernorum_V4 5 5
Coraliomargarita_akajimensis_DSM_45221 3 2
Opitutus_terrae_PB90-1 25 16
Akkermansia_muciniphila_ATCC_BAA-835 1 1
Fretibacterium_fastidiosum 1 1
Thermovirga_lienii_DSM_17291 1 1
Aminobacterium_colombiense_DSM_12261 2 2
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Anaerobaculum_mobile_DSM_13181 2 2
Turneriella_parva_DSM_21527 5 4
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 3 2
Leptospira_interrogans_serovar_Lai_str._IPAV 3 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 3 2
Brachyspira_murdochii_DSM_12563 2 1
Brachyspira_intermedia_PWS/A 2 1
Brachyspira_pilosicoli_95/1000 2 1
Brachyspira_hyodysenteriae_WA1 2 1
Borrelia_garinii_PBi 3 2
Borrelia_bissettii_DN127 3 2
Borrelia_afzelii_PKo 3 2
Borrelia_burgdorferi_B31 3 2
Borrelia_recurrentis_A1 3 2
Borrelia_duttonii_Ly 3 2
Borrelia_crocidurae_str._Achema 3 2
Borrelia_turicatae_91E135 3 2
Borrelia_hermsii_DAH 3 2
Spirochaeta_smaragdinae_DSM_11293 6 4
Sphaerochaeta_pleomorpha_str._Grapes 1 1
Sphaerochaeta_coccoides_DSM_17374 1 1
Spirochaeta_caldaria_DSM_7334 11 9
Treponema_azotonutricium_ZAS-9 5 4
Treponema_primitia_ZAS-2 7 5
Treponema_brennaborense_DSM_12168 9 7
Treponema_paraluiscuniculi_Cuniculi_A 1 1
Treponema_succinifaciens_DSM_2489 9 7
Treponema_pallidum_subsp._pallidum_SS14 2 2
Treponema_denticola_ATCC_35405 4 4
Spirochaeta_africana_DSM_8902 17 16
Spirochaeta_thermophila_DSM_6192 7 6
Calditerrivibrio_nitroreducens_DSM_19672 1 1
Denitrovibrio_acetiphilus_DSM_12809 1 1
Flexistipes_sinusarabici_DSM_4947 2 2
Marinitoga_piezophila_KA3 7 6
Petrotoga_mobilis_SJ95 8 6
Mesotoga_prima_MesG1.Ag.4.2 1 1
Kosmotoga_olearia_TBF_19.5.1 4 3
Fervidobacterium_pennivorans_DSM_9078 9 5
Fervidobacterium_nodosum_Rt17-B1 6 3
Thermosipho_melanesiensis_BI429 4 3
Thermosipho_africanus_TCF52B 4 3
Thermotoga_lettingae_TMO 2 2
Thermotoga_thermarum_DSM_5069 2 2
Thermotoga_sp._RQ2 4 2
Thermotoga_naphthophila_RKU-10 4 2
Thermotoga_petrophila_RKU-1 4 2
Thermotoga_neapolitana_DSM_4359 4 2
Thermotoga_maritima_MSB8 4 2
Sulfurihydrogenibium_sp._YO3AOP1 2 2
Sulfurihydrogenibium_azorense_Az-Fu1 2 2
Persephonella_marina_EX-H1 1 1
Hydrogenobaculum_sp._SN 1 1
Hydrogenobaculum_sp._HO 1 1
Hydrogenobaculum_sp._Y04AAS1 2 2
Thermocrinis_albus_DSM_14484 2 2
Aquifex_aeolicus_VF5 2 2
Hydrogenobacter_thermophilus_TK-6 4 4
Elusimicrobium_minutum_Pei191 2 2
Dictyoglomus_turgidum_DSM_6724 2 2
Dictyoglomus_thermophilum_H-6-12 1 1
Candidatus_Chloracidobacterium_thermophilum_B 18 4
Candidatus_Solibacter_usitatus_Ellin6076 75 63
Granulicella_tundricola_MP5ACTX9 18 12
Granulicella_mallensis_MP5ACTX8 22 12
Candidatus_Koribacter_versatilis_Ellin345 20 15
Terriglobus_saanensis_SP1PR4 6 6
Terriglobus_roseus_DSM_18391 25 16
Acidobacterium_capsulatum_ATCC_51196 14 8
Thermodesulfovibrio_yellowstonii_DSM_11347 1 1
Candidatus_Nitrospira_defluvii 13 9
Leptospirillum_ferrooxidans_C2-3 1 1
Streptobacillus_moniliformis_DSM_12112 4 3
Sebaldella_termitidis_ATCC_33386 3 2
Leptotrichia_buccalis_C-1013-b 3 2
Ilyobacter_polytropus_DSM_2926 2 2
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 2 2
Candidatus_Methylomirabilis_oxyfera 5 4
Candidatus_Saccharimonas_aalborgensis 1 1
Acidithiobacillus_ferrivorans_SS3 7 6
Acidithiobacillus_caldus_SM-1 6 5
Acidithiobacillus_ferrooxidans_ATCC_53993 5 4
Bdellovibrio_bacteriovorus_HD100 1 1
Nitratifractor_salsuginis_DSM_16511 4 4
Arcobacter_sp._L 4 3
Arcobacter_nitrofigilis_DSM_7299 3 3
Arcobacter_butzleri_RM4018 4 3
Campylobacter_lari_RM2100 1 1
uncultured_Sulfuricurvum_sp._RIFRC-1 3 3
Sulfuricurvum_kujiense_DSM_16994 4 4
Sulfurimonas_autotrophica_DSM_16294 4 4
Sulfurimonas_denitrificans_DSM_1251 3 3
Nitratiruptor_sp._SB155-2 3 3
Sulfurovum_sp._NBC37-1 5 5
Desulfobacca_acetoxidans_DSM_11109 1 1
Syntrophus_aciditrophicus_SB 1 1
Desulfomonile_tiedjei_DSM_6799 3 3
Syntrophobacter_fumaroxidans_MPOB 10 10
Desulfurivibrio_alkaliphilus_AHT2 7 6
Desulfobulbus_propionicus_DSM_2032 5 5
Desulfatibacillum_alkenivorans_AK-01 6 5
Desulfobacterium_autotrophicum_HRM2 3 3
Desulfococcus_oleovorans_Hxd3 2 2
Desulfohalobium_retbaense_DSM_5692 4 4
Desulfomicrobium_baculatum_DSM_4028 4 4
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 1 1
Desulfovibrio_magneticus_RS-1 4 4
Desulfovibrio_alaskensis_G20 3 3
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 2 2
Desulfovibrio_salexigens_DSM_2638 3 3
Desulfovibrio_africanus_str._Walvis_Bay 5 5
Hippea_maritima_DSM_10411 1 1
Geobacter_daltonii_FRC-32 5 4
Geobacter_sp._M21 11 7
Geobacter_uraniireducens_Rf4 5 3
Geobacter_lovleyi_SZ 7 5
Geobacter_bemidjiensis_Bem 7 6
Geobacter_sulfurreducens_KN400 9 6
Geobacter_metallireducens_GS-15 3 2
Pelobacter_propionicus_DSM_2379 5 4
Pelobacter_carbinolicus_DSM_2380 2 1
Haliangium_ochraceum_DSM_14365 16 12
Sorangium_cellulosum_'So_ce_56' 14 11
Anaeromyxobacter_sp._Fw109-5 20 9
Anaeromyxobacter_dehalogenans_2CP-1 9 9
Stigmatella_aurantiaca_DW4/3-1 22 20
Corallococcus_coralloides_DSM_2259 16 14
Myxococcus_xanthus_DK_1622 28 18
Myxococcus_fulvus_HW-1 14 13
Dechloromonas_aromatica_RCB 5 5
Thauera_sp._MZ1T 9 6
Azoarcus_sp._KH32C 7 6
Azoarcus_sp._BH72 7 6
Aromatoleum_aromaticum_EbN1 7 5
Dechlorosoma_suillum_PS 1 1
Pseudogulbenkiania_sp._NH8B 4 3
Chromobacterium_violaceum_ATCC_12472 10 10
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 6 4
beta_proteobacterium_CB 4 4
Methylibium_petroleiphilum_PM1 10 10
Thiomonas_arsenitoxydans 11 10
Thiomonas_intermedia_K12 10 9
Rubrivivax_gelatinosus_IL144 12 10
Leptothrix_cholodnii_SP-6 9 8
Burkholderia_rhizoxinica_HKI_454 1 1
Burkholderia_phytofirmans_PsJN 9 8
Burkholderia_phymatum_STM815 10 9
Burkholderia_xenovorans_LB400 9 9
Ralstonia_eutropha_JMP134 10 10
Cupriavidus_taiwanensis_LMG_19424 13 12
Cupriavidus_metallidurans_CH34 6 6
Cupriavidus_necator_N-1 13 12
Ralstonia_eutropha_H16 12 11
Ralstonia_pickettii_12D 15 14
Ralstonia_solanacearum_CFBP2957 12 11
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 6 6
Burkholderia_sp._RPE64 10 10
Burkholderia_sp._CCGE1002 13 12
Burkholderia_thailandensis_E264 10 10
Burkholderia_pseudomallei_1106a 13 13
Burkholderia_mallei_SAVP1 10 9
Burkholderia_ambifaria_AMMD 10 9
Burkholderia_cenocepacia_HI2424 9 9
Burkholderia_multivorans_ATCC_17616 7 6
Burkholderia_vietnamiensis_G4 8 7
Burkholderia_gladioli_BSR3 10 9
Burkholderia_glumae_BGR1 6 5
Verminephrobacter_eiseniae_EF01-2 1 1
Ramlibacter_tataouinensis_TTB310 5 5
Delftia_sp._Cs1-4 16 5
Delftia_acidovorans_SPH-1 18 5
Polaromonas_sp._JS666 4 4
Polaromonas_naphthalenivorans_CJ2 7 6
Variovorax_paradoxus_S110 8 7
Rhodoferax_ferrireducens_T118 5 5
Acidovorax_sp._KKS102 3 3
Acidovorax_sp._JS42 1 1
Acidovorax_citrulli_AAC00-1 3 3
Acidovorax_avenae_subsp._avenae_ATCC_19860 3 3
Comamonas_testosteroni_CNB-2 6 6
Herminiimonas_arsenicoxydans 8 8
Collimonas_fungivorans_Ter331 3 3
Janthinobacterium_sp._Marseille 6 6
Herbaspirillum_seropedicae_SmR1 9 8
Pusillimonas_sp._T7-7 1 1
Advenella_kashmirensis_WT001 7 7
Bordetella_petrii_DSM_12804 6 5
Bordetella_pertussis_Tohama_I 3 3
Bordetella_parapertussis_12822 3 3
Bordetella_bronchiseptica_RB50 3 3
Achromobacter_xylosoxidans_A8 10 9
Achromobacter_xylosoxidans 8 7
Thiobacillus_denitrificans_ATCC_25259 4 4
Nitrosospira_multiformis_ATCC_25196 7 6
Nitrosomonas_sp._Is79A3 7 4
Nitrosomonas_eutropha_C91 2 2
Nitrosomonas_europaea_ATCC_19718 3 3
Sideroxydans_lithotrophicus_ES-1 3 2
Gallionella_capsiferriformans_ES-2 1 1
Methylotenera_versatilis_301 5 4
Methylotenera_mobilis_JLW8 5 4
Methylovorus_sp._MP688 6 5
Methylovorus_glucosetrophus_SIP3-4 7 6
Methylobacillus_flagellatus_KT 7 6
Magnetococcus_marinus_MC-1 8 6
Parvularcula_bermudensis_HTCC2503 2 2
Asticcacaulis_excentricus_CB_48 4 4
Brevundimonas_subvibrioides_ATCC_15264 2 2
Caulobacter_sp._K31 2 2
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 2 2
Phenylobacterium_zucineum_HLK1 2 2
Erythrobacter_litoralis_HTCC2594 1 1
Sphingopyxis_alaskensis_RB2256 1 1
Novosphingobium_sp._PP1Y 7 6
Novosphingobium_aromaticivorans_DSM_12444 7 5
Sphingobium_sp._SYK-6 7 6
Sphingobium_japonicum_UT26S 7 6
Sphingobium_chlorophenolicum_L-1 6 5
Sphingomonas_sp._MM-1 3 3
Sphingomonas_wittichii_RW1 3 3
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1 1
Maricaulis_maris_MCS10 2 2
Hirschia_baltica_ATCC_49814 7 6
Hyphomonas_neptunium_ATCC_15444 3 3
Dinoroseobacter_shibae_DFL_12 9 9
Phaeobacter_gallaeciensis_2.10 4 4
Pseudovibrio_sp._FO-BEG1 4 4
Jannaschia_sp._CCS1 4 4
Ruegeria_sp._TM1040 2 2
Ruegeria_pomeroyi_DSS-3 4 4
Ketogulonicigenium_vulgare_Y25 4 4
Ketogulonigenium_vulgarum_WSH-001 4 4
Roseobacter_litoralis_Och_149 9 8
Roseobacter_denitrificans_OCh_114 8 7
Rhodobacter_sphaeroides_ATCC_17029 10 9
Rhodobacter_capsulatus_SB_1003 7 6
Paracoccus_denitrificans_PD1222 12 10
Rhodospirillum_photometricum_DSM_122 5 4
Tistrella_mobilis_KA081020-065 6 4
Magnetospirillum_magneticum_AMB-1 6 5
Rhodospirillum_centenum_SW 7 5
Rhodospirillum_rubrum_F11 9 8
Azospirillum_lipoferum_4B 8 7
Azospirillum_sp._B510 7 6
Azospirillum_brasilense_Sp245 10 9
Gluconacetobacter_xylinus_NBRC_3288 8 7
Granulibacter_bethesdensis_CGDNIH1 9 8
Gluconacetobacter_diazotrophicus_PAl_5 5 5
Acidiphilium_multivorum_AIU301 7 6
Acidiphilium_cryptum_JF-5 6 5
Gluconobacter_oxydans_621H 2 2
Acetobacter_pasteurianus_IFO_3283-01 6 5
Polymorphum_gilvum_SL003B-26A1 8 8
Candidatus_Puniceispirillum_marinum_IMCC1322 1 1
Rickettsia_felis_URRWXCal2 1 1
Rickettsia_rhipicephali_str._3-7-female6-CWPP 1 1
Rickettsia_australis_str._Cutlack 1 1
Starkeya_novella_DSM_506 11 10
Xanthobacter_autotrophicus_Py2 7 7
Azorhizobium_caulinodans_ORS_571 4 4
Methylobacterium_chloromethanicum_CM4 13 13
Methylobacterium_extorquens_AM1 16 16
Methylobacterium_sp._4-46 16 16
Methylobacterium_populi_BJ001 10 10
Methylobacterium_nodulans_ORS_2060 16 16
Methylobacterium_radiotolerans_JCM_2831 13 13
Parvibaculum_lavamentivorans_DS-1 3 3
Sinorhizobium_fredii_NGR234 7 6
Sinorhizobium_medicae_WSM419 8 7
Sinorhizobium_meliloti_AK83 11 10
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 6 5
Rhizobium_etli_CIAT_652 11 9
Rhizobium_leguminosarum_bv._viciae_3841 10 9
Agrobacterium_tumefaciens_str._C58 4 3
Agrobacterium_radiobacter_K84 6 5
Agrobacterium_sp._H13-3 5 4
Agrobacterium_vitis_S4 7 6
Mesorhizobium_sp._BNC1 6 5
Mesorhizobium_opportunistum_WSM2075 3 3
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 4 4
Mesorhizobium_loti_MAFF303099 4 4
Methylocella_silvestris_BL2 9 8
Beijerinckia_indica_subsp._indica_ATCC_9039 6 6
Pelagibacterium_halotolerans_B2 2 2
Rhodomicrobium_vannielii_ATCC_17100 8 7
Hyphomicrobium_sp._MC1 7 7
Hyphomicrobium_denitrificans_ATCC_51888 8 8
Oligotropha_carboxidovorans_OM4 9 9
Rhodopseudomonas_palustris_BisA53 9 8
Nitrobacter_winogradskyi_Nb-255 6 5
Nitrobacter_hamburgensis_X14 11 11
Bradyrhizobium_japonicum_USDA_110 13 13
Bradyrhizobium_sp._ORS_278 19 14
Methylocystis_sp._SC2 13 12
Saccharophagus_degradans_2-40 18 12
Teredinibacter_turnerae_T7901 10 9
Cellvibrio_japonicus_Ueda107 19 13
Aggregatibacter_aphrophilus_NJ8700 4 3
Aggregatibacter_actinomycetemcomitans_D7S-1 3 2
Haemophilus_somnus_129PT 3 2
Gallibacterium_anatis_UMN179 3 2
Pasteurella_multocida_subsp._multocida_str._3480 3 2
Haemophilus_parasuis_SH0165 3 2
Haemophilus_parainfluenzae_T3T1 3 2
Haemophilus_influenzae_PittEE 1 1
Actinobacillus_succinogenes_130Z 3 2
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 3 2
Oceanimonas_sp._GK1 1 1
Tolumonas_auensis_DSM_9187 6 5
Aeromonas_veronii_B565 13 11
Aeromonas_salmonicida_subsp._salmonicida_A449 11 9
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 12 10
Aliivibrio_salmonicida_LFI1238 5 5
Vibrio_fischeri_MJ11 8 7
Vibrio_sp._Ex25 12 10
Vibrio_harveyi_ATCC_BAA-1116 11 9
Vibrio_parahaemolyticus_RIMD_2210633 13 11
Vibrio_splendidus_LGP32 12 9
Vibrio_anguillarum_775 14 11
Vibrio_furnissii_NCTC_11218 10 9
Vibrio_vulnificus_MO6-24/O 12 10
Vibrio_cholerae_O395 12 10
Photobacterium_profundum_SS9 10 8
Psychromonas_ingrahamii_37 5 5
Idiomarina_loihiensis_L2TR 1 1
Ferrimonas_balearica_DSM_9799 4 4
Shewanella_piezotolerans_WP3 11 8
Shewanella_loihica_PV-4 9 7
Shewanella_halifaxensis_HAW-EB4 2 2
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_denitrificans_OS217 5 5
Shewanella_pealeana_ATCC_700345 2 2
Shewanella_oneidensis_MR-1 8 8
Shewanella_baltica_OS185 11 10
Shewanella_woodyi_ATCC_51908 9 9
Shewanella_sp._MR-4 10 10
Shewanella_amazonensis_SB2B 11 7
Shewanella_violacea_DSS12 5 5
Shewanella_frigidimarina_NCIMB_400 7 6
Shewanella_putrefaciens_CN-32 8 8
Colwellia_psychrerythraea_34H 7 5
Pseudoalteromonas_sp._SM9913 9 8
Pseudoalteromonas_atlantica_T6c 10 7
Pseudoalteromonas_haloplanktis_TAC125 3 3
Glaciecola_sp._4H-3-7+YE-5 12 9
Glaciecola_nitratireducens_FR1064 7 5
Marinobacter_adhaerens_HP15 4 4
Marinobacter_sp._BSs20148 3 3
Marinobacter_hydrocarbonoclasticus_ATCC_49840 3 3
Marinobacter_aquaeolei_VT8 2 2
Alteromonas_sp._SN2 12 10
Alteromonas_macleodii_str._'Deep_ecotype' 11 9
Hahella_chejuensis_KCTC_2396 12 10
Marinomonas_posidonica_IVIA-Po-181 5 4
Marinomonas_sp._MWYL1 6 5
Marinomonas_mediterranea_MMB-1 8 6
Chromohalobacter_salexigens_DSM_3043 2 2
Halomonas_elongata_DSM_2581 2 2
Methylomicrobium_alcaliphilum 8 8
Methylomonas_methanica_MC09 12 11
Methylococcus_capsulatus_str._Bath 11 10
Dichelobacter_nodosus_VCS1703A 1 1
Rhodanobacter_denitrificans 1 1
Frateuria_aurantia_DSM_6220 3 3
Pseudoxanthomonas_spadix_BD-a59 6 6
Pseudoxanthomonas_suwonensis_11-1 6 5
Stenotrophomonas_maltophilia_K279a 8 8
Xylella_fastidiosa_M23 1 1
Xanthomonas_axonopodis_pv._citri_str._306 7 7
Xanthomonas_albilineans_GPE_PC73 9 7
Xanthomonas_oryzae_pv._oryzae_PXO99A 6 6
Xanthomonas_campestris_pv._campestris_str._B100 8 7
Halothiobacillus_neapolitanus_c2 7 6
Spiribacter_sp._UAH-SP71 1 1
Alkalilimnicola_ehrlichii_MLHE-1 6 5
Thioalkalivibrio_sulfidophilus_HL-EbGr7 8 7
Thioalkalivibrio_sp._K90mix 5 4
Halorhodospira_halophila_SL1 3 2
Allochromatium_vinosum_DSM_180 7 6
Thiocystis_violascens_DSM_198 7 6
Nitrosococcus_watsonii_C-113 6 6
Nitrosococcus_halophilus_Nc4 7 6
Nitrosococcus_oceani_ATCC_19707 5 4
Legionella_longbeachae_NSW150 1 1
gamma_proteobacterium_HdN1 2 2
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 1 1
Candidatus_Vesicomyosocius_okutanii_HA 1 1
Photorhabdus_asymbiotica 6 5
Photorhabdus_luminescens_subsp._laumondii_TTO1 6 5
Xenorhabdus_bovienii_SS-2004 6 5
Xenorhabdus_nematophila_ATCC_19061 5 4
Providencia_stuartii_MRSN_2154 10 9
Proteus_mirabilis_HI4320 3 3
Edwardsiella_ictaluri_93-146 6 5
Edwardsiella_tarda_EIB202 5 4
Rahnella_sp._Y9602 11 10
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 10 9
Yersinia_pseudotuberculosis_IP_31758 9 8
Yersinia_pestis_Pestoides_F 7 6
Yersinia_enterocolitica_subsp._enterocolitica_8081 8 7
Serratia_sp._AS12 11 10
Serratia_sp._ATCC_39006 7 6
Serratia_plymuthica_AS9 11 10
Serratia_proteamaculans_568 12 11
Dickeya_dadantii_Ech703 8 7
Dickeya_zeae_Ech1591 7 6
Pectobacterium_wasabiae_WPP163 6 5
Pectobacterium_sp._SCC3193 6 5
Pectobacterium_atrosepticum_SCRI1043 5 4
Pectobacterium_carotovorum_subsp._carotovorum_PC1 5 4
Sodalis_glossinidius_str._'morsitans' 3 3
Pantoea_sp._At-9b 14 13
Pantoea_vagans_C9-1 9 8
Pantoea_ananatis_LMG_20103 10 9
Erwinia_tasmaniensis_Et1/99 6 5
Erwinia_sp._Ejp617 6 5
Erwinia_billingiae_Eb661 10 9
Erwinia_pyrifoliae_Ep1/96 6 5
Erwinia_amylovora_ATCC_49946 7 6
Escherichia_blattae_DSM_4481 8 7
Cronobacter_turicensis_z3032 13 12
Cronobacter_sakazakii_ES15 10 9
Enterobacteriaceae_bacterium_strain_FGI_57 9 8
Shigella_sonnei_Ss046 8 7
Shigella_flexneri_5_str._8401 9 8
Shigella_dysenteriae_Sd197 8 7
Shigella_boydii_CDC_3083-94 7 6
Salmonella_bongori_NCTC_12419 19 10
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 21 11
Klebsiella_oxytoca_E718 14 12
Klebsiella_variicola_At-22 10 8
Klebsiella_pneumoniae_NTUH-K2044 13 11
Enterobacter_aerogenes_KCTC_2190 9 8
Escherichia_fergusonii_ATCC_35469 9 8
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 9 8
Enterobacter_sp._R4-368 13 12
Enterobacter_sp._638 9 8
Enterobacter_asburiae_LF7a 10 9
Enterobacter_cloacae_subsp._dissolvens_SDM 12 11
Citrobacter_rodentium_ICC168 10 9
Citrobacter_koseri_ATCC_BAA-895 10 9
Azotobacter_vinelandii_DJ 6 5
Pseudomonas_sp._TKP 13 12
Pseudomonas_sp._UW4 8 7
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 8 7
Pseudomonas_entomophila_L48 9 7
Pseudomonas_syringae_pv._tomato_str._DC3000 7 6
Pseudomonas_stutzeri_A1501 8 6
Pseudomonas_fulva_12-X 6 5
Pseudomonas_putida_F1 8 6
Pseudomonas_protegens_Pf-5 12 10
Pseudomonas_fluorescens_SBW25 8 7
Pseudomonas_mendocina_ymp 9 7
Pseudomonas_aeruginosa_UCBPP-PA14 7 6
Pseudomonas_sp._VLB120 8 6
Acinetobacter_oleivorans_DR1 1 1
Acinetobacter_baumannii_ATCC_17978 1 1
Methylophaga_sp._JAM1 3 3
Cycloclasticus_sp._P1 1 1
Thiomicrospira_crunogena_XCL-2 4 3
Thioalkalimicrobium_cyclicum_ALM1 4 3
Francisella_noatunensis_subsp._orientalis_str._Toba_04 2 2
Francisella_sp._TX077308 4 4
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 4 4
Francisella_tularensis_subsp._tularensis_WY96-3418 3 3
Francisella_cf._novicida_3523 3 3
Francisella_novicida_U112 3 3
Cenarchaeum_symbiosum_A 1 1
Candidatus_Nitrosopumilus_sp._AR2 1 1
Nitrosopumilus_maritimus_SCM1 1 1
Thermogladius_cellulolyticus_1633 1 1
Thermosphaera_aggregans_DSM_11486 2 2
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_mucosus_DSM_2162 1 1
Metallosphaera_cuprina_Ar-4 2 2
Metallosphaera_sedula_DSM_5348 1 1
Acidianus_hospitalis_W1 2 2
Sulfolobus_tokodaii_str._7 2 2
Sulfolobus_islandicus_Y.N.15.51 2 2
Sulfolobus_solfataricus_P2 2 2
Sulfolobus_acidocaldarius_DSM_639 2 2
Thermofilum_sp._1910b 1 1
Thermofilum_pendens_Hrk_5 3 2
Vulcanisaeta_distributa_DSM_14429 1 1
Thermoproteus_uzoniensis_768-20 1 1
halophilic_archaeon_DL31 2 2
Methanocella_arvoryzae_MRE50 1 1
Methanosalsum_zhilinae_DSM_4017 3 1
Methanococcoides_burtonii_DSM_6242 1 1
Methanosarcina_acetivorans_C2A 1 1
Methanosarcina_barkeri_str._Fusaro 3 2
Methanoregula_boonei_6A8 5 4
Methanospirillum_hungatei_JF-1 4 2
Methanoplanus_petrolearius_DSM_11571 1 1
Methanoculleus_bourgensis_MS2 3 2
Methanoculleus_marisnigri_JR1 1 1
Thermococcus_sp._4557 3 2
Thermococcus_onnurineus_NA1 3 2
Thermococcus_kodakarensis_KOD1 4 3
Thermococcus_gammatolerans_EJ3 3 2
Thermococcus_barophilus_MP 3 2
Pyrococcus_yayanosii_CH1 3 2
Pyrococcus_furiosus_COM1 3 2
Picrophilus_torridus_DSM_9790 1 1
Salinarchaeum_sp._Harcht-Bsk1 2 2
Halopiger_xanaduensis_SH-6 1 1
Haloterrigena_turkmenica_DSM_5511 2 2
Natrialba_magadii_ATCC_43099 1 1
Halogeometricum_borinquense_DSM_11551 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Halomicrobium_mukohataei_DSM_12286 5 5
Halorhabdus_utahensis_DSM_12940 3 3
Natronomonas_pharaonis_DSM_2160 2 2
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 2 2
Halalkalicoccus_jeotgali_B3 2 2
Methanobrevibacter_sp._AbM4 1 1
Aciduliprofundum_sp._MAR08-339 1 1
Aciduliprofundum_boonei_T469 1 1
Acholeplasma_laidlawii_PG-8A 4 4

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   403 191
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   298 124
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   180 84
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   100 33
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   230 76
Cryptococcus_neoformans_var._grubii_H99_ 14 14
Cryptococcus_neoformans_B-3501A_ 14 14
Cryptococcus_neoformans_JEC21_ 13 13
Paracoccidioides_brasiliensis_Pb01_ 18 18
Paracoccidioides_brasiliensis_Pb03_ 20 20
Coccidioides_posadasii_str._Silveira_ 17 17
Coccidioides_immitis_RMSCC_3703_ 15 15
Coccidioides_immitis_RMSCC_2394_ 17 17
Coccidioides_immitis_H538.4_ 16 16
Ajellomyces_dermatitidis_ER-3_ 16 16
Histoplasma_capsulatum_H143 15 15
Histoplasma_capsulatum_H88 17 17
Histoplasma_capsulatum_G186AR 17 17
Aspergillus_fumigatus_A1163_ 19 19
Candida_albicans_WO-1_ 17 17
Saccharomyces_cerevisiae_UC5 13 13
Saccharomyces_cerevisiae_PW5 17 16
Saccharomyces_cerevisiae_FL100 9 9
Saccharomyces_cerevisiae_CLIB324 8 8
Saccharomyces_cerevisiae_CBS7960 13 12
Saccharomyces_cerevisiae_YJM269 15 14
Saccharomyces_cerevisiae_T7 18 17
Saccharomyces_cerevisiae_FostersB 13 13
Saccharomyces_cerevisiae_FostersO 10 10
Saccharomyces_cerevisiae_VL3 14 14
Saccharomyces_cerevisiae_Vin13 14 14
Saccharomyces_cerevisiae_LalvinQA23 15 15
Saccharomyces_cerevisiae_AWRI796 12 12
Saccharomyces_cerevisiae_Sigma1278b 18 17
Saccharomyces_cerevisiae_W303 18 17
Saccharomyces_cerevisiae_JAY291 18 17
Saccharomyces_cerevisiae_AWRI1631 9 9
Saccharomyces_cerevisiae_YPS163 8 8
Saccharomyces_cerevisiae_M22 4 4
Saccharomyces_cerevisiae_T73 9 9
Saccharomyces_cerevisiae_CLIB215 12 12
Saccharomyces_cerevisiae_Y10 3 3
Saccharomyces_cerevisiae_YJM789_ 18 17
Saccharomyces_cerevisiae_YJM789 18 17
Saccharomyces_cerevisiae_RM11-1a 18 17
Saccharomyces_cerevisiae_RM11-1a_ 17 16
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   18 17
Schizosaccharomyces_pombe_972h-_ 14 14
Batrachochytrium_dendrobatidis_JEL423_ 22 20
Batrachochytrium_dendrobatidis_JAM81_ 21 19
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   49 47
Hordeum_vulgare_22   (Domesticated barley)   64 64
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   51 48
Trypanosoma_brucei_Lister_427_v4.1 6 6
Neospora_caninum_Nc-Liverpool_6.2 18 15
Plasmodium_falciparum_HB3_ 9 6
Plasmodium_falciparum_Dd2_ 8 5
Chroococcidiopsis_thermalis_PCC_7203 12 11
Chamaesiphon_minutus_PCC_6605 6 5
Synechocystis_sp._PCC_6803_substr._PCC-P 4 3
Synechocystis_sp._PCC_6803_substr._PCC-N 4 3
Synechocystis_sp._PCC_6803_substr._GT-I 4 3
Synechocystis_sp._PCC_6803 5 4
Cyanobium_gracile_PCC_6307 4 3
Dactylococcopsis_salina_PCC_8305 5 3
Synechococcus_sp._JA-2-3B'a(2-13) 5 4
Synechococcus_sp._JA-3-3Ab 4 3
Synechococcus_sp._CC9902 3 2
Synechococcus_sp._RCC307 3 2
Synechococcus_sp._CC9605 4 3
Synechococcus_sp._WH_8102 2 1
Synechococcus_sp._WH_7803 3 2
Synechococcus_sp._PCC_7002 2 1
Synechococcus_elongatus_PCC_6301 3 2
Prochlorococcus_marinus_str._NATL1A 3 2
Prochlorococcus_marinus_str._MIT_9301 3 2
Prochlorococcus_marinus_str._AS9601 3 2
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 3 2
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 3 2
Prochlorococcus_marinus_str._MIT_9215 3 2
Prochlorococcus_marinus_str._MIT_9211 3 2
Prochlorococcus_marinus_str._MIT_9313 3 2
Prochlorococcus_marinus_str._MIT_9312 3 2
Prochlorococcus_marinus_str._MIT_9303 3 2
Prochlorococcus_marinus_str._NATL2A 3 2
Crinalium_epipsammum_PCC_9333 9 8
Oscillatoria_nigro-viridis_PCC_7112 5 4
Oscillatoria_acuminata_PCC_6304 6 5
Arthrospira_platensis_NIES-39 6 5
Cyanothece_sp._PCC_7822 12 11
Cyanothece_sp._PCC_7425 6 5
Cyanothece_sp._PCC_7424 11 10
Cyanothece_sp._ATCC_51142 8 7
Cyanothece_sp._PCC_8801 9 8
Cyanobacterium_aponinum_PCC_10605 5 4
Cyanobacterium_stanieri_PCC_7202 3 2
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 36 22
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 5 4
Stanieria_cyanosphaera_PCC_7437 6 5
Calothrix_parietina_Calothrix_sp._PCC_6303 4 3
Cylindrospermum_stagnale_PCC_7417 8 7
Anabaena_cylindrica_PCC_7122 6 5
Mycoplasma_cynos_C142 1 1
Mycoplasma_fermentans_JER 1 1
Mycoplasma_fermentans_PG18 1 1
Mycoplasma_hyorhinis_SK76 1 1
Mycoplasma_hyorhinis_MCLD 1 1
Mycoplasma_hyorhinis_HUB-1 1 1
Mycoplasma_hyorhinis_DBS_1050 1 1
Mycoplasma_hyopneumoniae_7422 1 1
Mycoplasma_hyopneumoniae_7448 1 1
Mycoplasma_hyopneumoniae_J 1 1
Adlercreutzia_equolifaciens_DSM_19450 6 6
Frankia_sp._EuI1c 9 8
Frankia_sp._CcI3 7 6
Nocardiopsis_alba_ATCC_BAA-2165 9 8
Streptomyces_albus_J1074 15 13
Streptomyces_rapamycinicus_NRRL_5491 31 21
Streptomyces_davawensis_JCM_4913 22 20
Streptomyces_fulvissimus_DSM_40593 21 19
Streptomyces_venezuelae_ATCC_10712 16 15
Streptomyces_collinus_Tu_365 14 13
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 11 10
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 27 17
Saccharothrix_espanaensis_DSM_44229 23 20
Amycolatopsis_mediterranei_RB 20 19
Amycolatopsis_mediterranei_S699 20 19
Amycolatopsis_mediterranei_S699 20 19
Amycolatopsis_orientalis_HCCB10007 13 11
Propionibacterium_avidum_44067 4 4
Propionibacterium_acnes_ATCC_11828 3 3
Propionibacterium_acnes_TypeIA2_P.acn31 3 3
Propionibacterium_acnes_TypeIA2_P.acn17 3 3
Propionibacterium_acnes_TypeIA2_P.acn33 3 3
Propionibacterium_acnes_C1 3 3
Propionibacterium_acnes_HL096PA1 3 3
Propionibacterium_acnes_6609 3 3
Propionibacterium_acnes_266 3 3
Propionibacterium_acnes_KPA171202 3 3
Propionibacterium_acidipropionici_ATCC_4875 6 5
Actinoplanes_friuliensis_DSM_7358 38 27
Rhodococcus_pyridinivorans_SB3094 5 5
Rhodococcus_erythropolis_CCM2595 8 7
Nocardia_brasiliensis_ATCC_700358 7 7
Mycobacterium_sp._MOTT36Y 7 6
Mycobacterium_sp._JDM601 8 6
Mycobacterium_abscessus_subsp._bolletii_50594 6 5
Mycobacterium_liflandii_128FXT 5 4
Mycobacterium_sp._KMS 8 7
Mycobacterium_sp._MCS 7 6
Mycobacterium_yongonense_05-1390 7 6
Mycobacterium_intracellulare_MOTT-64 7 6
Mycobacterium_indicus_pranii_MTCC_9506 7 6
Mycobacterium_intracellulare_MOTT-02 7 6
Mycobacterium_avium_subsp._paratuberculosis_MAP4 6 5
Mycobacterium_avium_subsp._paratuberculosis_K-10 5 4
Mycobacterium_canettii_CIPT_140070017 5 4
Mycobacterium_canettii_CIPT_140060008 4 3
Mycobacterium_canettii_CIPT_140070008 5 4
Mycobacterium_canettii_CIPT_140070010 5 4
Mycobacterium_tuberculosis_EAI5/NITR206 3 2
Mycobacterium_tuberculosis_EAI5 3 2
Mycobacterium_tuberculosis_CAS/NITR204 4 3
Mycobacterium_tuberculosis_str._Beijing/NITR203 4 3
Mycobacterium_tuberculosis_UT205 4 3
Mycobacterium_tuberculosis_RGTB423 2 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 4 3
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 5 4
Mycobacterium_tuberculosis_KZN_605 4 3
Mycobacterium_tuberculosis_KZN_4207 4 3
Mycobacterium_tuberculosis_CCDC5180 4 3
Mycobacterium_tuberculosis_CCDC5079 4 3
Mycobacterium_tuberculosis_CCDC5079 4 3
Mycobacterium_tuberculosis_H37Ra 5 4
Mycobacterium_tuberculosis_str._Haarlem/NITR202 3 2
Mycobacterium_tuberculosis_str._Haarlem 5 4
Mycobacterium_tuberculosis_F11 5 4
Mycobacterium_tuberculosis_H37Rv 4 3
Mycobacterium_tuberculosis_CDC1551 5 4
Mycobacterium_bovis_AF2122/97 5 4
Mycobacterium_bovis_BCG_str._Korea_1168P 5 4
Mycobacterium_bovis_BCG_str._Mexico 5 4
Mycobacterium_bovis_BCG_str._Tokyo_172 5 4
Mycobacterium_gilvum_Spyr1 7 6
Mycobacterium_smegmatis_str._MC2_155 7 6
Mycobacterium_kansasii_ATCC_12478 8 7
Corynebacterium_maris_DSM_45190 4 4
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 5 5
Corynebacterium_terpenotabidum_Y-11 3 3
Corynebacterium_ulcerans_BR-AD22 5 4
Corynebacterium_ulcerans_809 5 4
Corynebacterium_urealyticum_DSM_7111 1 1
Corynebacterium_argentoratense_DSM_44202 5 4
Corynebacterium_callunae_DSM_20147 7 6
Corynebacterium_pseudotuberculosis_258 5 4
Corynebacterium_pseudotuberculosis_Cp162 5 4
Corynebacterium_pseudotuberculosis_P54B96 5 4
Corynebacterium_pseudotuberculosis_267 5 4
Corynebacterium_pseudotuberculosis_1/06-A 5 4
Corynebacterium_pseudotuberculosis_42/02-A 5 4
Corynebacterium_pseudotuberculosis_3/99-5 5 4
Corynebacterium_pseudotuberculosis_31 5 4
Corynebacterium_pseudotuberculosis_CIP_52.97 4 3
Corynebacterium_pseudotuberculosis_PAT10 5 4
Corynebacterium_pseudotuberculosis_I19 5 4
Corynebacterium_pseudotuberculosis_FRC41 5 4
Corynebacterium_pseudotuberculosis_C231 5 4
Corynebacterium_pseudotuberculosis_1002 5 4
Corynebacterium_glutamicum_MB001 6 5
Corynebacterium_glutamicum_SCgG2 6 5
Corynebacterium_glutamicum_SCgG1 6 5
Corynebacterium_glutamicum_ATCC_13032 6 5
Corynebacterium_glutamicum_ATCC_13032 6 5
Corynebacterium_glutamicum_ATCC_13032 6 5
Corynebacterium_diphtheriae_BH8 5 4
Corynebacterium_diphtheriae_INCA_402 5 4
Corynebacterium_diphtheriae_VA01 7 5
Corynebacterium_diphtheriae_HC04 7 5
Corynebacterium_diphtheriae_HC03 7 5
Corynebacterium_diphtheriae_HC02 5 4
Corynebacterium_diphtheriae_HC01 5 4
Corynebacterium_diphtheriae_241 5 4
Corynebacterium_diphtheriae_CDCE_8392 5 4
Corynebacterium_diphtheriae_PW8 5 4
Corynebacterium_diphtheriae_C7_(beta) 5 4
Corynebacterium_diphtheriae_31A 5 4
Tropheryma_whipplei_str._Twist 1 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 10 7
Clavibacter_michiganensis_subsp._sepedonicus 8 7
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 10 9
Gardnerella_vaginalis_HMP9231 6 5
Gardnerella_vaginalis_ATCC_14019 6 5
Bifidobacterium_longum_NCC2705 4 3
Bifidobacterium_longum_DJO10A 4 3
Bifidobacterium_longum_subsp._infantis_157F 4 3
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 4 3
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 4 3
Bifidobacterium_longum_subsp._longum_KACC_91563 4 3
Bifidobacterium_longum_subsp._longum_BBMN68 4 3
Bifidobacterium_longum_subsp._longum_F8 4 3
Bifidobacterium_longum_subsp._longum_JCM_1217 4 3
Bifidobacterium_thermophilum_RBL67 7 6
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 6 5
Bifidobacterium_animalis_subsp._lactis_Bl12 5 4
Bifidobacterium_animalis_subsp._lactis_B420 6 5
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 5 4
Bifidobacterium_animalis_subsp._lactis_BLC1 5 4
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 6 5
Bifidobacterium_animalis_subsp._lactis_Bi-07 6 5
Bifidobacterium_animalis_subsp._lactis_V9 6 5
Bifidobacterium_animalis_subsp._lactis_DSM_10140 6 5
Bifidobacterium_animalis_subsp._lactis_BB-12 6 5
Bifidobacterium_animalis_subsp._lactis_AD011 4 3
Bifidobacterium_breve_UCC2003 5 4
Bifidobacterium_bifidum_PRL2010 4 3
Bifidobacterium_bifidum_BGN4 4 3
Actinomyces_graevenitzii_C83_ 5 4
Actinomyces_odontolyticus_ATCC_17982 7 5
Actinomyces_viscosus_C505 8 6
Dehalococcoides_mccartyi_GY50 1 1
Dehalococcoides_sp._VS 1 1
Chthonomonas_calidirosea_T49 5 4
Deinococcus_peraridilitoris_DSM_19664 12 11
Thermus_oshimai_JL-2 3 3
Thermus_thermophilus_JL-18 3 3
Thermus_thermophilus_SG0.5JP17-16 3 3
Thermus_thermophilus_HB8 4 4
Eubacterium_siraeum_V10Sc8a 5 3
Clostridium_thermocellum_DSM_1313 9 8
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 7 5
Faecalibacterium_prausnitzii_L2-6 2 2
Ruminococcus_champanellensis_18P13 4 4
Sulfobacillus_acidophilus_TPY 2 2
Clostridium_acidurici_9a 8 3
Desulfosporosinus_meridiei_DSM_13257 5 2
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 8 4
Clostridium_difficile_BI1 2 2
Clostridium_difficile_R20291 2 2
Clostridium_difficile_CD196 2 2
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 3 3
Coprococcus_catus_GD/7 2 2
Roseburia_intestinalis_XB6B4 6 5
Clostridium_sp._SY8519 2 2
Clostridium_saccharobutylicum_DSM_13864 3 3
Clostridium_autoethanogenum_DSM_10061 2 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 9 7
Clostridium_kluyveri_NBRC_12016 1 1
Clostridium_tetani_genome_12124569 1 1
Clostridium_perfringens_SM101 6 6
Clostridium_perfringens_str._13 6 6
Clostridium_pasteurianum_BC1 4 4
Clostridium_botulinum_H04402_065 4 2
Clostridium_botulinum_BKT015925 4 3
Clostridium_botulinum_F_str._230613 4 2
Clostridium_botulinum_F_str._Langeland 4 2
Clostridium_botulinum_E3_str._Alaska_E43 3 3
Clostridium_botulinum_B1_str._Okra 4 2
Clostridium_botulinum_Ba4_str._657 4 2
Clostridium_botulinum_A2_str._Kyoto 4 2
Clostridium_botulinum_A3_str._Loch_Maree 4 2
Clostridium_botulinum_A_str._Hall 4 2
Clostridium_botulinum_A_str._ATCC_19397 4 2
Clostridium_acetobutylicum_DSM_1731 8 3
Clostridium_acetobutylicum_EA_2018 8 3
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 13 4
Thermoanaerobacterium_thermosaccharolyticum_M0795 12 2
Thermacetogenium_phaeum_DSM_12270 3 3
Thermoanaerobacter_sp._X513 2 2
Halobacteroides_halobius_DSM_5150 5 4
Carnobacterium_maltaromaticum_LMA28 3 3
Melissococcus_plutonius_ATCC_35311 2 2
Enterococcus_mundtii_QU_25 8 8
Enterococcus_casseliflavus_EC20 3 3
Enterococcus_faecium_Aus0085 2 2
Enterococcus_faecium_NRRL_B-2354 1 1
Enterococcus_faecium_DO 1 1
Enterococcus_faecalis_str._Symbioflor_1 3 3
Enterococcus_faecalis_D32 3 3
Enterococcus_faecalis_OG1RF 3 3
Enterococcus_faecalis_V583 1 1
Leuconostoc_gelidum_JB7 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 2 2
Lactobacillus_casei_LOCK919 2 2
Lactobacillus_casei_W56 2 2
Lactobacillus_casei_LC2W 2 2
Lactobacillus_casei_BD-II 2 2
Lactobacillus_casei_BL23 2 2
Lactobacillus_casei_str._Zhang 2 2
Lactobacillus_rhamnosus_LOCK908 1 1
Lactobacillus_rhamnosus_LOCK900 1 1
Lactobacillus_rhamnosus_ATCC_8530 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_johnsonii_N6.2 1 1
Lactobacillus_johnsonii_DPC_6026 1 1
Lactobacillus_johnsonii_NCC_533 1 1
Lactobacillus_salivarius_UCC118 3 3
Lactobacillus_amylovorus_GRL_1112 3 3
Lactobacillus_plantarum_16 2 2
Lactobacillus_plantarum_ZJ316 2 2
Lactobacillus_plantarum_subsp._plantarum_ST-III 2 2
Lactobacillus_plantarum_subsp._plantarum_P-8 2 2
Lactobacillus_plantarum_WCFS1 2 2
Lactobacillus_helveticus_R0052 2 2
Lactobacillus_helveticus_H10 1 1
Lactobacillus_helveticus_CNRZ32 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 1 1
Lactobacillus_acidophilus_La-14 2 2
Lactobacillus_acidophilus_NCFM 2 2
Lactococcus_garvieae_Lg2 3 3
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 3 3
Lactococcus_lactis_subsp._lactis_IO-1 4 4
Lactococcus_lactis_subsp._lactis_CV56 3 3
Lactococcus_lactis_subsp._lactis_KF147 3 3
Lactococcus_lactis_subsp._lactis_Il1403 2 2
Lactococcus_lactis_subsp._cremoris_KW2 5 5
Lactococcus_lactis_subsp._cremoris_UC509.9 3 3
Lactococcus_lactis_subsp._cremoris_A76 3 3
Lactococcus_lactis_subsp._cremoris_NZ9000 4 4
Lactococcus_lactis_subsp._cremoris_SK11 3 3
Streptococcus_constellatus_subsp._pharyngis_C1050 5 5
Streptococcus_constellatus_subsp._pharyngis_C818 5 5
Streptococcus_constellatus_subsp._pharyngis_C232 5 5
Streptococcus_intermedius_B196 5 5
Streptococcus_intermedius_C270 5 5
Streptococcus_anginosus_C238 5 5
Streptococcus_anginosus_C1051 4 4
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 5 5
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 5 5
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 5 5
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 6 6
Streptococcus_equi_subsp._zooepidemicus 6 6
Streptococcus_dysgalactiae_subsp._equisimilis_167 6 6
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 6 6
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 6 6
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 6 6
Streptococcus_oligofermentans_AS_1.3089 5 5
Streptococcus_iniae_SF1 6 6
Streptococcus_parasanguinis_FW213 4 4
Streptococcus_pyogenes_HSC5 1 1
Streptococcus_pyogenes_A20 3 3
Streptococcus_pyogenes_MGAS1882 1 1
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_Alab49 1 1
Streptococcus_pyogenes_MGAS10750 3 3
Streptococcus_pyogenes_MGAS10270 3 3
Streptococcus_pyogenes_MGAS2096 1 1
Streptococcus_pyogenes_MGAS9429 1 1
Streptococcus_pyogenes_MGAS6180 3 3
Streptococcus_pyogenes_NZ131 1 1
Streptococcus_pyogenes_MGAS8232 1 1
Streptococcus_pyogenes_MGAS10394 1 1
Streptococcus_pyogenes_MGAS315 1 1
Streptococcus_pyogenes_SSI-1 1 1
Streptococcus_pyogenes_M1_476 3 3
Streptococcus_pyogenes_MGAS5005 3 3
Streptococcus_pyogenes_M1_GAS 3 3
Streptococcus_pneumoniae_A026 4 4
Streptococcus_pneumoniae_ST556 5 5
Streptococcus_pneumoniae_SPNA45 5 5
Streptococcus_pneumoniae_SPN994039 4 4
Streptococcus_pneumoniae_SPN994038 4 4
Streptococcus_pneumoniae_SPN034183 4 4
Streptococcus_pneumoniae_SPN034156 3 3
Streptococcus_pneumoniae_INV104 4 4
Streptococcus_pneumoniae_INV200 4 4
Streptococcus_pneumoniae_OXC141 4 4
Streptococcus_pneumoniae_gamPNI0373 4 4
Streptococcus_pneumoniae_AP200 5 5
Streptococcus_pneumoniae_ATCC_700669 5 5
Streptococcus_pneumoniae_TCH8431/19A 5 5
Streptococcus_pneumoniae_CGSP14 5 5
Streptococcus_pneumoniae_G54 5 5
Streptococcus_pneumoniae_JJA 5 5
Streptococcus_pneumoniae_70585 5 5
Streptococcus_pneumoniae_Hungary19A-6 6 6
Streptococcus_pneumoniae_Taiwan19F-14 4 4
Streptococcus_pneumoniae_D39 5 5
Streptococcus_pneumoniae_670-6B 5 5
Streptococcus_pneumoniae_R6 5 5
Streptococcus_pneumoniae_TIGR4 4 4
Streptococcus_agalactiae_ILRI112 4 4
Streptococcus_agalactiae_ILRI005 4 4
Streptococcus_agalactiae_09mas018883 4 4
Streptococcus_agalactiae_2-22 3 3
Streptococcus_agalactiae_SA20-06 3 3
Streptococcus_agalactiae_GD201008-001 4 4
Streptococcus_agalactiae_NEM316 4 4
Streptococcus_agalactiae_2603V/R 4 4
Streptococcus_mutans_GS-5 2 2
Streptococcus_mutans_LJ23 2 2
Streptococcus_mutans_UA159 2 2
Streptococcus_thermophilus_JIM_8232 1 1
Streptococcus_suis_T15 5 5
Streptococcus_suis_TL13 3 3
Streptococcus_suis_SC070731 3 3
Streptococcus_suis_S735 3 3
Streptococcus_suis_ST3 5 5
Streptococcus_suis_D9 3 3
Streptococcus_suis_SS12 3 3
Streptococcus_suis_D12 3 3
Streptococcus_suis_ST1 3 3
Streptococcus_suis_A7 3 3
Streptococcus_suis_JS14 3 3
Streptococcus_suis_BM407 3 3
Streptococcus_suis_SC84 3 3
Streptococcus_suis_GZ1 3 3
Streptococcus_suis_98HAH33 3 3
Streptococcus_suis_05ZYH33 3 3
Streptococcus_salivarius_CCHSS3 3 3
Streptococcus_salivarius_JIM8777 3 3
Exiguobacterium_antarcticum_B7 3 3
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 5 4
Thermobacillus_composti_KWC4 3 3
Paenibacillus_sp._Y412MC10 16 10
Paenibacillus_mucilaginosus_KNP414 16 15
Paenibacillus_mucilaginosus_K02 14 14
Paenibacillus_larvae_subsp._larvae_DSM_25430 5 5
Paenibacillus_polymyxa_CR1 6 5
Paenibacillus_polymyxa_SC2 6 5
Paenibacillus_polymyxa_E681 6 5
Listeria_monocytogenes_EGD_sequence 17 17
Listeria_monocytogenes_N53-1 12 12
Listeria_monocytogenes_La111 12 12
Listeria_monocytogenes_serotype_4b_str._LL195 17 17
Listeria_monocytogenes_07PF0776 17 17
Listeria_monocytogenes_M7 12 12
Listeria_monocytogenes_J1-220 17 17
Listeria_monocytogenes_J1816 16 16
Listeria_monocytogenes_SLCC2376 16 16
Listeria_monocytogenes_SLCC5850 17 17
Listeria_monocytogenes_ATCC_19117 17 17
Listeria_monocytogenes_L312 17 17
Listeria_monocytogenes_SLCC2479 16 16
Listeria_monocytogenes_SLCC7179 17 17
Listeria_monocytogenes_SLCC2540 21 21
Listeria_monocytogenes_SLCC2378 17 17
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 17 17
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 16 16
Listeria_monocytogenes_serotype_7_str._SLCC2482 17 17
Listeria_monocytogenes_08-5578 16 16
Listeria_monocytogenes_08-5923 16 16
Listeria_monocytogenes_L99 12 12
Listeria_monocytogenes_HCC23 12 12
Listeria_monocytogenes_10403S 17 17
Listeria_monocytogenes_J0161 16 16
Listeria_monocytogenes_Finland_1998 16 16
Listeria_monocytogenes_FSL_R2-561 16 16
Listeria_monocytogenes_serotype_4b_str._F2365 16 16
Listeria_monocytogenes_EGD-e 16 16
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y4.1MC1 2 2
Geobacillus_sp._Y412MC52 2 2
Geobacillus_sp._Y412MC61 2 2
Amphibacillus_xylanus_NBRC_15112 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2 2
Bacillus_amyloliquefaciens_LFB112 2 2
Bacillus_amyloliquefaciens_CC178 2 2
Bacillus_amyloliquefaciens_Y2 2 2
Bacillus_amyloliquefaciens_IT-45 2 2
Bacillus_amyloliquefaciens_XH7 2 2
Bacillus_amyloliquefaciens_LL3 2 2
Bacillus_amyloliquefaciens_TA208 2 2
Bacillus_amyloliquefaciens_DSM_7 2 2
Bacillus_licheniformis_9945A 5 5
Bacillus_subtilis_PY79 4 4
Bacillus_subtilis_XF-1 4 4
Bacillus_subtilis_QB928 4 4
Bacillus_subtilis_BSn5 4 4
Bacillus_subtilis_subsp._subtilis_str._BAB-1 5 5
Bacillus_subtilis_subsp._subtilis_str._BSP1 4 4
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 4 4
Bacillus_subtilis_subsp._subtilis_6051-HGW 4 4
Bacillus_subtilis_subsp._spizizenii_TU-B-10 6 6
Bacillus_subtilis_subsp._spizizenii_str._W23 4 4
Bacillus_subtilis_subsp._natto_BEST195 4 4
Bacillus_licheniformis_DSM_13_=_ATCC_14580 5 5
Bacillus_infantis_NRRL_B-14911 4 4
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 3 3
Bacillus_toyonensis_BCT-7112 8 7
Bacillus_thuringiensis_HD-771 9 8
Bacillus_thuringiensis_HD-789 9 8
Bacillus_thuringiensis_MC28 11 10
Bacillus_thuringiensis_serovar_chinensis_CT-43 10 9
Bacillus_thuringiensis_YBT-1518 9 8
Bacillus_thuringiensis_Bt407 10 9
Bacillus_thuringiensis_serovar_konkukian_str._97-27 10 9
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 10 9
Bacillus_thuringiensis_BMB171 9 8
Bacillus_thuringiensis_serovar_finitimus_YBT-020 10 9
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 11 10
Bacillus_cereus_FRI-35 9 8
Bacillus_cereus_biovar_anthracis_str._CI 9 9
Bacillus_cereus_AH820 8 7
Bacillus_cereus_AH187 11 10
Bacillus_cereus_B4264 10 9
Bacillus_cereus_G9842 9 8
Bacillus_cereus_Q1 10 9
Bacillus_cereus_F837/76 10 9
Bacillus_cereus_NC7401 11 10
Bacillus_cereus_E33L 11 10
Bacillus_cereus_ATCC_14579 8 7
Bacillus_cereus_ATCC_10987 8 8
Bacillus_anthracis_str._H9401 10 9
Bacillus_anthracis_str._CDC_684 10 9
Bacillus_anthracis_str._'Ames_Ancestor' 9 8
Bacillus_anthracis_str._Sterne 9 8
Bacillus_anthracis_str._Ames 9 8
Bacillus_megaterium_WSH-002 3 3
Bacillus_megaterium_QM_B1551 4 4
Bacillus_coagulans_36D1 2 2
Staphylococcus_pasteuri_SP1 1 1
Staphylococcus_warneri_SG1 1 1
Staphylococcus_epidermidis_ATCC_12228 1 1
Salinibacter_ruber_DSM_13855 9 9
Rhodothermus_marinus_SG0.5JP17-172 6 6
Echinicola_vietnamensis_DSM_17526 6 6
Emticicia_oligotrophica_DSM_17448 15 15
Prevotella_sp._oral_taxon_299_str._F0039 1 1
Prevotella_dentalis_DSM_3688 4 4
Porphyromonas_gingivalis_TDC60 3 3
Porphyromonas_gingivalis_W83 4 4
Alistipes_shahii_WAL_8301 1 1
Bacteroides_xylanisolvens_XB1A 10 10
Bacteroides_fragilis_638R 4 4
Bacteroides_fragilis_NCTC_9343 4 4
Nonlabens_dokdonensis_DSW-6 8 7
Psychroflexus_torquis_ATCC_700755 2 2
Riemerella_anatipestifer_RA-CH-2 1 1
Riemerella_anatipestifer_RA-GD 1 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 8 7
Chlamydia_pecorum_P787 3 2
Chlamydia_pecorum_W73 3 2
Chlamydia_pecorum_PV3056/3 3 2
Chlamydophila_pneumoniae_LPCoLN 3 2
Chlamydophila_pneumoniae_J138 3 2
Chlamydophila_pneumoniae_CWL029 3 2
Chlamydophila_pneumoniae_AR39 3 2
Chlamydia_psittaci_01DC12 3 2
Chlamydia_psittaci_WC 3 2
Chlamydia_psittaci_M56 3 2
Chlamydia_psittaci_WS/RT/E30 3 2
Chlamydia_psittaci_VS225 3 2
Chlamydia_psittaci_MN 3 2
Chlamydia_psittaci_GR9 3 2
Chlamydia_psittaci_84/55 2 2
Chlamydia_psittaci_08DC60 3 2
Chlamydia_psittaci_02DC15 3 2
Chlamydia_psittaci_C19/98 3 2
Chlamydia_psittaci_NJ1 3 2
Chlamydia_psittaci_CP3 3 2
Chlamydophila_psittaci_RD1 3 2
Chlamydia_psittaci_Mat116 3 2
Chlamydophila_psittaci_6BC 3 2
Chlamydophila_psittaci_6BC 3 2
Chlamydia_trachomatis_C/TW-3 3 2
Chlamydia_trachomatis_L2/434/Bu(f) 3 2
Chlamydia_trachomatis_L2/434/Bu(i) 3 2
Chlamydia_trachomatis_IU888 3 2
Chlamydia_trachomatis_IU824 3 2
Chlamydia_trachomatis_L2b/Canada2 3 2
Chlamydia_trachomatis_L2b/Canada1 3 2
Chlamydia_trachomatis_L3/404/LN 3 2
Chlamydia_trachomatis_L2b/Ams5 3 2
Chlamydia_trachomatis_L2b/Ams4 3 2
Chlamydia_trachomatis_L2b/Ams3 3 2
Chlamydia_trachomatis_L2b/Ams2 3 2
Chlamydia_trachomatis_L2b/Ams1 3 2
Chlamydia_trachomatis_L2b/795 3 2
Chlamydia_trachomatis_L2b/CV204 3 2
Chlamydia_trachomatis_L2b/LST 3 2
Chlamydia_trachomatis_L2b/UCH-2 3 2
Chlamydia_trachomatis_L2b/8200/07 3 2
Chlamydia_trachomatis_L2/25667R 3 2
Chlamydia_trachomatis_L1/224 3 2
Chlamydia_trachomatis_L1/115 3 2
Chlamydia_trachomatis_L1/440/LN 3 2
Chlamydia_trachomatis_K/SotonK1 3 2
Chlamydia_trachomatis_Ia/SotonIa3 3 2
Chlamydia_trachomatis_Ia/SotonIa1 3 2
Chlamydia_trachomatis_G/SotonG1 3 2
Chlamydia_trachomatis_F/SotonF3 3 2
Chlamydia_trachomatis_F/SW5 3 2
Chlamydia_trachomatis_F/SW4 3 2
Chlamydia_trachomatis_E/SotonE8 3 2
Chlamydia_trachomatis_E/SotonE4 3 2
Chlamydia_trachomatis_E/SW3 3 2
Chlamydia_trachomatis_D/SotonD6 3 2
Chlamydia_trachomatis_D/SotonD5 3 2
Chlamydia_trachomatis_D/SotonD1 3 2
Chlamydia_trachomatis_A/5291 3 2
Chlamydia_trachomatis_A/363 3 2
Chlamydia_trachomatis_RC-J/971 3 2
Chlamydia_trachomatis_RC-L2/55 3 2
Chlamydia_trachomatis_J/6276tet1 3 2
Chlamydia_trachomatis_RC-J/966 3 2
Chlamydia_trachomatis_RC-J(s)/122 3 2
Chlamydia_trachomatis_RC-F(s)/342 3 2
Chlamydia_trachomatis_RC-L2(s)/3 3 2
Chlamydia_trachomatis_RC-J/953 3 2
Chlamydia_trachomatis_RC-J943 3 2
Chlamydia_trachomatis_RC-Fs852 3 2
Chlamydia_trachomatis_RC-L2s46 3 2
Chlamydia_trachomatis_RC-F69 3 2
Chlamydia_trachomatis_L2c 3 2
Chlamydia_trachomatis_D-LC 3 2
Chlamydia_trachomatis_D-EC 3 2
Chlamydia_trachomatis_G/9301 3 2
Chlamydia_trachomatis_G/11074 3 2
Chlamydia_trachomatis_G/11222 3 2
Chlamydia_trachomatis_G/9768 3 2
Chlamydia_trachomatis_E/150 3 2
Chlamydia_trachomatis_E/11023 3 2
Chlamydia_trachomatis_B/TZ1A828/OT 3 2
Chlamydia_trachomatis_Sweden2 3 2
Chlamydia_trachomatis_E/Bour 3 2
Chlamydia_trachomatis_A2497 3 2
Chlamydia_trachomatis_A2497 3 2
Chlamydia_trachomatis_L2b/UCH-1/proctitis 3 2
Chlamydia_trachomatis_434/Bu 3 2
Chlamydia_trachomatis_A/HAR-13 3 2
Chlamydia_trachomatis_D/UW-3/CX 3 2
Singulisphaera_acidiphila_DSM_18658 11 10
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 3 2
Leptospira_interrogans_serovar_Lai_str._56601 3 2
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 3 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 3 2
Brachyspira_pilosicoli_WesB 2 1
Brachyspira_pilosicoli_B2904 2 1
Brachyspira_pilosicoli_P43/6/78 2 1
Borrelia_garinii_NMJW1 3 2
Borrelia_garinii_BgVir 3 2
Borrelia_afzelii_HLJ01 3 2
Borrelia_afzelii_PKo 3 2
Borrelia_burgdorferi_CA382 3 2
Borrelia_burgdorferi_JD1 3 2
Borrelia_burgdorferi_N40 3 2
Borrelia_burgdorferi_ZS7 3 2
Borrelia_miyamotoi_LB-2001 3 2
Treponema_pedis_str._T_A4 4 4
Treponema_pallidum_str._Fribourg-Blanc 1 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1 1
Spirochaeta_thermophila_DSM_6578 8 7
Thermotoga_maritima_MSB8 4 2
Hydrogenobacter_thermophilus_TK-6 4 4
Leptospirillum_ferriphilum_ML-04 2 2
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 2 2
Fusobacterium_nucleatum_subsp._animalis_4_8 2 2
Acidithiobacillus_ferrooxidans_ATCC_23270 4 3
Bdellovibrio_bacteriovorus_str._Tiberius 3 3
Arcobacter_butzleri_7h1h 2 1
Arcobacter_butzleri_ED-1 2 1
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1 1
Campylobacter_jejuni_RM1221 1 1
Campylobacter_jejuni_subsp._jejuni_00-2544 1 1
Campylobacter_jejuni_subsp._jejuni_00-2538 1 1
Campylobacter_jejuni_subsp._jejuni_00-2426 1 1
Campylobacter_jejuni_subsp._jejuni_00-2425 1 1
Campylobacter_jejuni_subsp._jejuni_PT14 1 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1 1
Campylobacter_jejuni_subsp._jejuni_S3 1 1
Campylobacter_jejuni_subsp._jejuni_M1 1 1
Campylobacter_jejuni_subsp._jejuni_IA3902 1 1
Campylobacter_jejuni_subsp._jejuni_81116 1 1
Campylobacter_jejuni_subsp._jejuni_81-176 1 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 1 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 1 1
Desulfocapsa_sulfexigens_DSM_10523 5 4
Desulfobacula_toluolica_Tol2 4 4
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 4 4
Desulfovibrio_vulgaris_RCH1 2 2
Desulfovibrio_vulgaris_str._'Miyazaki_F' 2 2
Desulfovibrio_vulgaris_str._Hildenborough 2 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 2 2
Desulfovibrio_desulfuricans_ND132 3 3
Geobacter_sp._M18 9 6
Geobacter_sulfurreducens_PCA 10 7
Sorangium_cellulosum_So0157-2 18 15
Anaeromyxobacter_sp._K 9 9
Anaeromyxobacter_dehalogenans_2CP-C 10 10
Myxococcus_stipitatus_DSM_14675 19 17
Burkholderia_phenoliruptrix_BR3459a 9 8
Pandoraea_pnomenusa_3kgm 7 7
Ralstonia_pickettii_12J 16 15
Ralstonia_solanacearum_FQY_4 12 11
Ralstonia_solanacearum_Po82 11 11
Ralstonia_solanacearum_PSI07 12 11
Ralstonia_solanacearum_CMR15 17 11
Ralstonia_solanacearum_GMI1000 12 11
Polynucleobacter_necessarius_subsp._necessarius_STIR1 1 1
Burkholderia_sp._YI23 9 9
Burkholderia_sp._CCGE1003 9 8
Burkholderia_sp._CCGE1001 7 6
Burkholderia_sp._KJ006 8 7
Burkholderia_thailandensis_MSMB121 8 7
Burkholderia_pseudomallei_MSHR305 13 13
Burkholderia_pseudomallei_NCTC_13179 12 12
Burkholderia_pseudomallei_BPC006 13 13
Burkholderia_pseudomallei_1026b 13 13
Burkholderia_pseudomallei_MSHR346 10 10
Burkholderia_pseudomallei_668 11 11
Burkholderia_pseudomallei_1710b 14 14
Burkholderia_pseudomallei_K96243 14 14
Burkholderia_mallei_NCTC_10229 10 9
Burkholderia_mallei_NCTC_10247 8 8
Burkholderia_mallei_ATCC_23344 8 8
Burkholderia_lata 11 11
Burkholderia_ambifaria_MC40-6 9 8
Burkholderia_cenocepacia_MC0-3 9 9
Burkholderia_cenocepacia_AU_1054 9 9
Burkholderia_cenocepacia_J2315 7 7
Burkholderia_multivorans_ATCC_17616 7 6
Burkholderia_cepacia_GG4 8 7
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 3 2
Variovorax_paradoxus_B4 7 6
Variovorax_paradoxus_EPS 7 6
Bordetella_pertussis_CS 3 3
Bordetella_parapertussis_18323 3 3
Bordetella_bronchiseptica_MO149 3 3
Bordetella_bronchiseptica_253 3 3
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 7 6
Nitrosomonas_sp._AL212 6 5
Sulfuricella_denitrificans_skB26 6 5
Caulobacter_crescentus_CB15 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1 1
Zymomonas_mobilis_subsp._mobilis_CP4 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1 1
Zymomonas_mobilis_subsp._mobilis_ZM4 1 1
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1 1
Phaeobacter_gallaeciensis_DSM_17395 3 3
Phaeobacter_gallaeciensis_DSM_26640 3 3
Leisingera_methylohalidivorans_DSM_14336 5 5
Octadecabacter_antarcticus_307 4 3
Octadecabacter_arcticus_238 4 3
Rhodobacter_sphaeroides_KD131 10 9
Rhodobacter_sphaeroides_ATCC_17025 14 12
Rhodobacter_sphaeroides_2.4.1 9 8
Paracoccus_aminophilus_JCM_7686 2 2
Magnetospirillum_gryphiswaldense_MSR-1_v2 5 4
Rhodospirillum_rubrum_ATCC_11170 9 8
Gluconacetobacter_diazotrophicus_PAl_5 5 5
Gluconobacter_oxydans_H24 7 6
Acetobacter_pasteurianus_386B 5 4
Acetobacter_pasteurianus_IFO_3283-12 6 5
Acetobacter_pasteurianus_IFO_3283-01-42C 6 5
Acetobacter_pasteurianus_IFO_3283-32 6 5
Acetobacter_pasteurianus_IFO_3283-26 6 5
Acetobacter_pasteurianus_IFO_3283-22 6 5
Acetobacter_pasteurianus_IFO_3283-07 6 5
Acetobacter_pasteurianus_IFO_3283-03 6 5
Methylobacterium_extorquens_DM4 15 15
Methylobacterium_extorquens_PA1 10 10
Sinorhizobium_fredii_USDA_257 8 7
Sinorhizobium_fredii_HH103 8 7
Sinorhizobium_meliloti_2011 7 6
Sinorhizobium_meliloti_GR4 8 7
Sinorhizobium_meliloti_Rm41 10 9
Sinorhizobium_meliloti_SM11 11 10
Sinorhizobium_meliloti_BL225C 10 9
Sinorhizobium_meliloti_1021 9 8
Rhizobium_etli_CFN_42 13 11
Rhizobium_etli_bv._mimosae_str._Mim1 12 11
Rhizobium_tropici_CIAT_899 4 4
Rhizobium_leguminosarum_bv._trifolii_WSM2304 11 10
Rhizobium_leguminosarum_bv._trifolii_WSM1325 11 9
Mesorhizobium_australicum_WSM2073 3 3
Hyphomicrobium_nitrativorans_NL23 8 8
Hyphomicrobium_denitrificans_1NES1 7 7
Oligotropha_carboxidovorans_OM5 9 9
Oligotropha_carboxidovorans_OM5 9 9
Rhodopseudomonas_palustris_DX-1 21 9
Rhodopseudomonas_palustris_TIE-1 10 9
Rhodopseudomonas_palustris_HaA2 8 8
Rhodopseudomonas_palustris_BisB5 19 8
Rhodopseudomonas_palustris_BisB18 7 7
Rhodopseudomonas_palustris_CGA009 10 9
Bradyrhizobium_sp._S23321 11 11
Bradyrhizobium_sp._BTAi1 17 16
Bradyrhizobium_oligotrophicum_S58 29 15
Bradyrhizobium_japonicum_USDA_6 21 12
Simiduia_agarivorans_SA1_=_DSM_21679 9 8
Mannheimia_succiniciproducens_MBEL55E 3 2
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 3 2
Aggregatibacter_actinomycetemcomitans_ANH9381 3 2
Aggregatibacter_actinomycetemcomitans_D11S-1 3 2
Haemophilus_somnus_2336 3 2
Mannheimia_haemolytica_USMARC_2286 4 3
Mannheimia_haemolytica_M42548 4 3
Mannheimia_haemolytica_D174 4 3
Mannheimia_haemolytica_D171 4 3
Mannheimia_haemolytica_D153 4 3
Mannheimia_haemolytica_USDA-ARS-USMARC-183 4 3
Mannheimia_haemolytica_USDA-ARS-USMARC-185 4 3
Pasteurella_multocida_36950 3 2
Pasteurella_multocida_subsp._multocida_str._HN06 3 2
Pasteurella_multocida_subsp._multocida_str._Pm70 3 2
Haemophilus_parasuis_ZJ0906 3 2
Haemophilus_influenzae_KR494 3 2
Haemophilus_influenzae_10810 3 2
Haemophilus_influenzae_PittGG 3 2
Haemophilus_influenzae_86-028NP 3 2
Haemophilus_influenzae_R2866 3 2
Haemophilus_influenzae_R2846 3 2
Haemophilus_influenzae_Rd_KW20 3 2
Actinobacillus_suis_H91-0380 3 2
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 3 2
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 3 2
Aeromonas_hydrophila_ML09-119 12 10
Vibrio_fischeri_ES114 9 8
Vibrio_sp._EJY3 11 9
Vibrio_parahaemolyticus_BB22OP 14 11
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 13 11
Vibrio_anguillarum_Listonella_anguillarum_M3 14 11
Vibrio_nigripulchritudo_VibrioScope 9 8
Vibrio_vulnificus_CMCP6 12 10
Vibrio_vulnificus_YJ016 12 10
Vibrio_cholerae_LMA3984-4 9 8
Vibrio_cholerae_M66-2 10 9
Vibrio_cholerae_O395 12 10
Vibrio_cholerae_IEC224 12 10
Vibrio_cholerae_O1_str._2010EL-1786 12 10
Vibrio_cholerae_MJ-1236 12 10
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 8 8
Idiomarina_loihiensis_GSL_199 1 1
Shewanella_sp._W3-18-1 6 6
Shewanella_sp._ANA-3 9 9
Shewanella_baltica_BA175 12 11
Shewanella_baltica_OS678 14 12
Shewanella_baltica_OS117 11 10
Shewanella_baltica_OS223 13 12
Shewanella_baltica_OS195 14 12
Shewanella_baltica_OS155 11 10
Shewanella_sp._MR-7 10 9
Shewanella_putrefaciens_200 6 6
Glaciecola_psychrophila_170 7 4
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 12 10
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 12 10
Alteromonas_macleodii_str._'Ionian_Sea_U8' 10 8
Alteromonas_macleodii_str._'Ionian_Sea_U7' 10 8
Alteromonas_macleodii_str._'Ionian_Sea_U4' 10 8
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 11 9
Alteromonas_macleodii_str._'English_Channel_615' 6 6
Alteromonas_macleodii_AltDE1 12 10
Alteromonas_macleodii_str._'English_Channel_673' 10 8
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 11 9
Alteromonas_macleodii_str._'Black_Sea_11' 11 9
Alteromonas_macleodii_ATCC_27126 11 9
Alcanivorax_dieselolei_B5 1 1
Stenotrophomonas_maltophilia_D457 8 8
Stenotrophomonas_maltophilia_JV3 4 4
Stenotrophomonas_maltophilia_R551-3 4 4
Xylella_fastidiosa_subsp._fastidiosa_GB514 1 1
Xylella_fastidiosa_M12 1 1
Xylella_fastidiosa_Temecula1 1 1
Xylella_fastidiosa_9a5c 1 1
Xanthomonas_citri_subsp._citri_Aw12879 7 7
Xanthomonas_campestris_pv._vesicatoria_str._85-10 7 7
Xanthomonas_axonopodis_pv._citrumelo_F1 7 7
Xanthomonas_axonopodis_Xac29-1 7 7
Xanthomonas_oryzae_pv._oryzicola_BLS256 6 6
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 6 6
Xanthomonas_oryzae_pv._oryzae_KACC_10331 6 6
Xanthomonas_campestris_pv._raphani_756C 8 7
Xanthomonas_campestris_pv._campestris_str._8004 7 7
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 7 7
Spiribacter_salinus_M19-40 1 1
Thioalkalivibrio_nitratireducens_DSM_14787 8 8
Thioflavicoccus_mobilis_8321 7 6
Legionella_pneumophila_str._Paris 2 2
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Proteus_mirabilis_BB2000 3 3
Morganella_morganii_subsp._morganii_KT 3 3
Edwardsiella_tarda_C07-087 6 5
Edwardsiella_tarda_FL6-60 5 4
Rahnella_aquatilis_HX2 11 10
Yersinia_pseudotuberculosis_PB1/+ 9 8
Yersinia_pseudotuberculosis_YPIII 9 8
Yersinia_pseudotuberculosis_IP_32953 9 8
Yersinia_pestis_biovar_Microtus_str._91001 6 5
Yersinia_pestis_A1122 7 6
Yersinia_pestis_Z176003 6 6
Yersinia_pestis_D182038 7 6
Yersinia_pestis_D106004 7 6
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 6 5
Yersinia_pestis_Nepal516 7 6
Yersinia_pestis_Antiqua 7 6
Yersinia_pestis_Angola 6 5
Yersinia_pestis_CO92 6 5
Yersinia_pestis_KIM10+ 6 5
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 6 5
Yersinia_enterocolitica_subsp._palearctica_Y11 6 5
Serratia_sp._AS13 11 10
Serratia_plymuthica_S13 11 10
Serratia_plymuthica_4Rx13 12 11
Serratia_marcescens_FGI94 7 7
Serratia_marcescens_WW4 10 9
Serratia_liquefaciens_ATCC_27592 9 8
Dickeya_dadantii_Ech586 7 6
Dickeya_dadantii_3937 7 6
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 5 4
Pantoea_ananatis_LMG_5342 10 9
Pantoea_ananatis_PA13 10 9
Pantoea_ananatis_AJ13355 10 9
Erwinia_pyrifoliae_DSM_12163 6 5
Erwinia_amylovora_CFBP1430 7 6
Cronobacter_sakazakii_CMCC_45402 12 11
Cronobacter_sakazakii_SP291 13 12
Cronobacter_sakazakii_ATCC_BAA-894 13 12
Raoultella_ornithinolytica_B6 10 8
Shigella_sonnei_53G 8 7
Shigella_flexneri_2002017 8 7
Shigella_flexneri_2a_str._2457T 9 8
Shigella_flexneri_2a_str._301 9 8
Shigella_dysenteriae_1617 8 7
Shigella_boydii_Sb227 7 6
Salmonella_bongori_N268-08 19 10
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 26 10
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 21 11
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 21 11
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 21 11
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 22 12
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 20 11
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 20 10
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 21 11
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 21 11
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 20 10
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 21 11
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 20 10
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 18 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 21 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 20 10
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 21 11
Salmonella_enterica_serovar_Bovismorbificans_genomics 11 10
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 21 11
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 21 11
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 21 11
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 21 11
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 21 11
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 15 10
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 15 10
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 22 12
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 21 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 21 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 21 11
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 12 6
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 14 9
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 17 8
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 21 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 18 9
Klebsiella_oxytoca_KCTC_1686 14 12
Klebsiella_pneumoniae_JM45 11 9
Klebsiella_pneumoniae_CG43 10 8
Klebsiella_pneumoniae_KCTC_2242 12 10
Klebsiella_pneumoniae_342 11 9
Klebsiella_pneumoniae_subsp._pneumoniae_1084 11 9
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 10 8
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 11 9
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 10 8
Enterobacter_aerogenes_EA1509E 9 8
Escherichia_coli_E24377A 9 8
Escherichia_coli_E._coli_PMV-1 10 9
Escherichia_coli_JJ1886 9 8
Escherichia_coli_LY180 9 8
Escherichia_coli_APEC_O78 9 8
Escherichia_coli_O7:K1_str._CE10 8 7
Escherichia_coli_O104:H4_str._2009EL-2050 11 10
Escherichia_coli_O104:H4_str._2009EL-2071 11 10
Escherichia_coli_O104:H4_str._2011C-3493 10 9
Escherichia_coli_NA114 9 8
Escherichia_coli_P12b 10 9
Escherichia_coli_str._'clone_D_i2' 10 9
Escherichia_coli_str._'clone_D_i14' 10 9
Escherichia_coli_UM146 10 9
Escherichia_coli_042 9 8
Escherichia_coli_Xuzhou21 8 7
Escherichia_coli_IHE3034 9 8
Escherichia_coli_UMNK88 9 8
Escherichia_coli_O83:H1_str._NRG_857C 10 9
Escherichia_coli_ABU_83972 10 9
Escherichia_coli_KO11FL 9 8
Escherichia_coli_KO11FL 9 8
Escherichia_coli_LF82 9 8
Escherichia_coli_ED1a 9 8
Escherichia_coli_IAI39 7 6
Escherichia_coli_UMN026 8 7
Escherichia_coli_55989 10 9
Escherichia_coli_S88 10 9
Escherichia_coli_IAI1 10 9
Escherichia_coli_W 9 8
Escherichia_coli_W 9 8
Escherichia_coli_DH1 9 8
Escherichia_coli_DH1 9 8
Escherichia_coli_ATCC_8739 10 9
Escherichia_coli_BL21(DE3) 9 8
Escherichia_coli_BL21(DE3) 9 8
Escherichia_coli_SMS-3-5 8 7
Escherichia_coli_SE15 9 8
Escherichia_coli_SE11 9 8
Escherichia_coli_APEC_O1 10 9
Escherichia_coli_O103:H2_str._12009 9 8
Escherichia_coli_UTI89 10 9
Escherichia_coli_536 10 9
Escherichia_coli_HS 8 7
Escherichia_coli_ETEC_H10407 10 9
Escherichia_coli_O55:H7_str._RM12579 8 7
Escherichia_coli_O55:H7_str._CB9615 8 7
Escherichia_coli_O26:H11_str._11368 10 9
Escherichia_coli_CFT073 10 9
Escherichia_coli_O111:H-_str._11128 9 8
Escherichia_coli_O127:H6_str._E2348/69 9 8
Escherichia_coli_O157:H7_str._TW14359 8 7
Escherichia_coli_O157:H7_str._EC4115 8 7
Escherichia_coli_O157:H7_str._Sakai 8 7
Escherichia_coli_O157:H7_str._EDL933 8 7
Escherichia_coli_str._K-12_substr._MDS42 9 8
Escherichia_coli_BW2952 9 8
Escherichia_coli_str._K-12_substr._MG1655 9 8
Escherichia_coli_str._K-12_substr._W3110 9 8
Escherichia_coli_str._K-12_substr._DH10B 10 9
Escherichia_coli_B_str._REL606 9 8
Enterobacter_cloacae_SCF1 9 8
Enterobacter_cloacae_EcWSU1 11 10
Enterobacter_cloacae_subsp._cloacae_ENHKU01 12 11
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 11 10
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 15 14
Azotobacter_vinelandii_CA6 6 5
Azotobacter_vinelandii_CA 6 5
Pseudomonas_denitrificans_ATCC_13867 4 3
Pseudomonas_syringae_pv._phaseolicola_1448A 7 6
Pseudomonas_syringae_pv._syringae_B728a 8 7
Pseudomonas_stutzeri_CCUG_29243 8 6
Pseudomonas_stutzeri_DSM_10701 6 5
Pseudomonas_stutzeri_DSM_4166 8 6
Pseudomonas_stutzeri_RCH2 8 6
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 8 6
Pseudomonas_monteilii_SB3101 8 6
Pseudomonas_monteilii_SB3078 8 6
Pseudomonas_putida_H8234 8 6
Pseudomonas_putida_HB3267 8 6
Pseudomonas_putida_NBRC_14164 8 6
Pseudomonas_putida_DOT-T1E 8 6
Pseudomonas_putida_S16 8 6
Pseudomonas_putida_BIRD-1 8 6
Pseudomonas_putida_W619 8 6
Pseudomonas_putida_ND6 8 6
Pseudomonas_putida_KT2440 7 6
Pseudomonas_putida_GB-1 8 6
Pseudomonas_protegens_CHA0 12 10
Pseudomonas_poae_RE*1-1-14 7 6
Pseudomonas_fluorescens_F113 9 8
Pseudomonas_fluorescens_A506 10 9
Pseudomonas_fluorescens_R124 8 7
Pseudomonas_fluorescens_Pf0-1 11 9
Pseudomonas_resinovorans_NBRC_106553 3 2
Pseudomonas_mendocina_NK-01 6 5
Pseudomonas_aeruginosa_SCV20265 8 7
Pseudomonas_aeruginosa_MTB-1 7 6
Pseudomonas_aeruginosa_LES431 7 6
Pseudomonas_aeruginosa_RP73 7 6
Pseudomonas_aeruginosa_B136-33 7 6
Pseudomonas_aeruginosa_PA1R 7 6
Pseudomonas_aeruginosa_PA1 7 6
Pseudomonas_aeruginosa_DK2 8 7
Pseudomonas_aeruginosa_NCGM2.S1 7 6
Pseudomonas_aeruginosa_M18 7 6
Pseudomonas_aeruginosa_LESB58 7 6
Pseudomonas_aeruginosa_PA7 8 7
Pseudomonas_aeruginosa_PAO1 6 5
Acinetobacter_genomosp._13TU__RUH2624 2 2
Acinetobacter_sp.__SH024 1 1
Acinetobacter_calcoaceticus_ruh2202 1 1
Acinetobacter_baumannii_AYE 1 1
Acinetobacter_baumannii_AB0057 1 1
Acinetobacter_radioresistens__SH164 1 1
Acinetobacter_junii__SH205 1 1
Acinetobacter_johnsonii__SH046 1 1
Acinetobacter_lwoffii__SH145 1 1
Methylophaga_sp._JAM7 5 4
Cycloclasticus_zancles_7-ME 1 1
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 3 3
Francisella_tularensis_subsp._mediasiatica_FSC147 2 2
Francisella_tularensis_subsp._holarctica_F92 3 3
Francisella_tularensis_subsp._holarctica_FTNF002-00 2 2
Francisella_tularensis_subsp._holarctica_OSU18 3 3
Francisella_tularensis_subsp._holarctica_LVS 3 3
Francisella_tularensis_subsp._holarctica_FSC200 2 2
Francisella_tularensis_subsp._tularensis_TIGB03 2 2
Francisella_tularensis_subsp._tularensis_TI0902 2 2
Francisella_tularensis_subsp._tularensis_NE061598 3 3
Francisella_tularensis_subsp._tularensis_FSC198 3 3
Francisella_tularensis_subsp._tularensis_SCHU_S4 2 2
Francisella_cf._novicida_Fx1 3 3
Candidatus_Nitrososphaera_gargensis_Ga9.2 3 2
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 2 2
Sulfolobus_islandicus_LAL14/1 2 2
Sulfolobus_islandicus_REY15A 2 2
Sulfolobus_islandicus_HVE10/4 2 2
Sulfolobus_islandicus_Y.G.57.14 2 2
Sulfolobus_islandicus_L.S.2.15 2 2
Sulfolobus_islandicus_M.16.27 2 2
Sulfolobus_islandicus_M.14.25 2 2
Sulfolobus_islandicus_M.16.4 2 2
Sulfolobus_islandicus_L.D.8.5 2 2
Sulfolobus_solfataricus_98/2 2 2
Sulfolobus_acidocaldarius_SUSAZ 2 2
Sulfolobus_acidocaldarius_Ron12/I 2 2
Sulfolobus_acidocaldarius_N8 2 2
Methanolobus_psychrophilus_R15 1 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 3 3
Thermococcus_sp._AM4 3 2
Thermococcus_sp._CL1 4 3
Thermococcus_litoralis_DSM_5473 3 2
Pyrococcus_furiosus_DSM_3638 3 2
Natrinema_pellirubrum_DSM_15624 3 3
Natronococcus_occultus_SP4 2 2
Natronobacterium_gregoryi_SP2 1 1
Natronomonas_moolapensis_8.8.11 1 1
Haloarcula_hispanica_N601 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   232 108
Pan_troglodytes_69_2.1.4   (Chimpanzee)   186 94
Gorilla_gorilla_69_3.1   (Western gorilla)   224 102
Pongo_abelii_69_2   (Sumatran orangutan)   208 99
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   206 98
Macaca_mulatta_69_1   (Rhesus monkey)   215 97
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   214 102
Otolemur_garnettii_69_3   (Small-eared galago)   218 98
Microcebus_murinus_69_1   (Gray mouse lemur)   189 89
Rattus_norvegicus_69_3.4   (Norway rat)   222 108
Mus_musculus_69_38   (House mouse)   234 111
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   190 82
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   217 97
Cavia_porcellus_69_3   (Domestic guinea pig)   218 102
Oryctolagus_cuniculus_69_2   (Rabbit)   220 98
Ochotona_princeps_69   (American pika)   174 80
Tupaia_belangeri_69   (Northern tree shrew)   150 69
Sus_scrofa_69_10.2   (Pig)   164 92
Bos_taurus_69_3.1   (Cattle)   210 103
Vicugna_pacos_69_1   (Alpaca)   106 59
Tursiops_truncatus_69_1   (Bottlenose dolphin)   197 96
Mustela_putorius_furo_69_1.0   (Domestic ferret)   220 101
Ailuropoda_melanoleuca_69_1   (Giant panda)   214 98
Canis_familiaris_69_3.1   (Dog)   218 98
Felis_catus_69   (Domestic cat)   176 82
Equus_caballus_69_2   (Horse)   221 101
Myotis_lucifugus_69_2.0   (Little brown bat)   219 103
Pteropus_vampyrus_69_1   (Large flying fox)   208 93
Sorex_araneus_69_1   (European shrew)   133 69
Erinaceus_europaeus_69   (Western European hedgehog)   166 75
Procavia_capensis_69_1   (Cape rock hyrax)   179 83
Loxodonta_africana_69_3   (African savanna elephant)   220 103
Echinops_telfairi_69   (Small Madagascar hedgehog)   160 77
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   125 61
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   99 58
Macropus_eugenii_69_1.0   (Tammar wallaby)   187 85
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   212 93
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   210 92
Ornithorhynchus_anatinus_69_5   (Platypus)   198 95
Petromyzon_marinus_69_7.0   (Sea lamprey)   86 48
Meleagris_gallopavo_69_2   (Turkey)   135 85
Gallus_gallus_69_2   (Chicken)   134 81
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   160 88
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   137 88
Anolis_carolinensis_69_2.0   (Green anole)   172 89
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   232 119
Latimeria_chalumnae_69_1   (Coelacanth)   221 100
Gadus_morhua_69_1   (Atlantic cod)   253 124
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   267 129
Takifugu_rubripes_69_4   (Torafugu)   296 130
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   266 127
Oryzias_latipes_69_1   (Japanese medaka)   258 117
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   274 132
Oreochromis_niloticus_69_1.0   (Nile tilapia)   298 153
Danio_rerio_69_9   (Zebrafish)   297 158
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   105 52
Ciona_intestinalis_69   (Vase tunicate)   85 48
Drosophila_melanogaster_69_5   (Fruit fly)   131 68
Caenorhabditis_elegans_69_215   (Roundworm)   120 59
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   18 17
Arabidopsis_thaliana_10   (Thale cress)   51 49

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   925 369
Homo_sapiens__(NCBI_version)   (Human)   424 172
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   231 109
Heliconius_numata__(Incomplete) 34 34
Loa_loa_v3.3_(Request)   (Eye worm)   91 37
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   80 38
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   83 27
Moniliophthora_perniciosa_FA553__(Genome_survey) 12 12
Encephalitozoon_intestinalis__(endoparasite) 1 1
Encephalitozoon_cuniculi_(endoparasite) 1 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1 1
Lotus_japonicus__(Early_assembly) 48 48
Malus_x_domestica_(Duplicate)   (Apple)   94 92
Ricinus_communis__(Early_assembly)   (Castor bean)   46 43
Nicotiana_benthamiana_0.4.4_(Early_draft) 95 92
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   59 57
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   63 61
Phoenix_dactylifera__(Early_draft)   (Date palm)   44 39
Guillardia_theta_(nucleomorph) 1 1
Acholeplasma_laidlawii_PG-8A_(duplicate) 4 4
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 4 3
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 11 9
NCBI_plasmid_sequences_(Plasmids) 372 336
TargetDB__(Targets) 826 529
NCBI_viral_sequences_(Viral) 197 187
Protein_Data_Bank_(all_PDB_sequenc) 2032 1850
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3974 3971
Core_Eukaryotic_Genes_458_(CEGMA) 11 11
PDB_chains_(SCOP_1.75)_(PDB) 244 232
UniProt__viral_sequences_(Viral) 8175 8174
STRING_v9.0.5_(STRING) 16505 10549
Uniprot_2018_03_genome 272296 199534
Protozoadb_2010_08_(Protozoadb) 459 370
NCBI_2017_08_genome 747049 566461

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