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Domain combinations for Family A G protein-coupled receptor-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Family A G protein-coupled receptor-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   1483 1480
Pan_troglodytes_76_2.1.4   (Chimpanzee)   608 606
Gorilla_gorilla_76_3.1   (Western gorilla)   796 793
Pongo_abelii_76_2   (Sumatran orangutan)   580 578
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   450 449
Papio_anubis_76   (Olive baboon)   590 587
Macaca_mulatta_76_1   (Rhesus monkey)   843 838
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   903 899
Otolemur_garnettii_76_3   (Small-eared galago)   1041 1038
Microcebus_murinus_76_1   (Gray mouse lemur)   515 492
Rattus_norvegicus_76_5.0   (Norway rat)   1838 1834
Mus_musculus_76_38   (House mouse)   2080 2077
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   557 540
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1206 1202
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1572 1503
Cavia_porcellus_76_3   (Domestic guinea pig)   1166 1164
Oryctolagus_cuniculus_76_2   (Rabbit)   1183 1182
Ochotona_princeps_76   (American pika)   432 412
Tupaia_belangeri_76   (Northern tree shrew)   664 637
Sus_scrofa_76_10.2   (Pig)   1499 1494
Bos_taurus_76_3.1   (Cattle)   1374 1368
Ovis_aries_76_3.1   (Sheep)   988 956
Vicugna_pacos_76_1   (Alpaca)   449 420
Tursiops_truncatus_76_1   (Bottlenose dolphin)   244 235
Mustela_putorius_furo_76_1.0   (Domestic ferret)   998 997
Ailuropoda_melanoleuca_76_1   (Giant panda)   1110 1107
Canis_familiaris_76_3.1   (Dog)   923 922
Felis_catus_76_6.2   (Domestic cat)   1026 1022
Equus_caballus_76_2   (Horse)   1289 1284
Myotis_lucifugus_76_2.0   (Little brown bat)   803 796
Pteropus_vampyrus_76_1   (Large flying fox)   541 526
Sorex_araneus_76_1   (European shrew)   580 560
Erinaceus_europaeus_76   (Western European hedgehog)   581 557
Procavia_capensis_76_1   (Cape rock hyrax)   481 466
Loxodonta_africana_76_3   (African savanna elephant)   2338 2336
Echinops_telfairi_76   (Small Madagascar hedgehog)   579 548
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2127 1892
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   610 590
Macropus_eugenii_76_1.0   (Tammar wallaby)   715 690
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1137 1134
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1406 1389
Ornithorhynchus_anatinus_76_5   (Platypus)   1337 1332
Saccoglossus_kowalevskii_v3.0 581 581
Petromyzon_marinus_76_7.0   (Sea lamprey)   236 234
Meleagris_gallopavo_76_2   (Turkey)   343 342
Gallus_gallus_76_4   (Chicken)   335 334
Anas_platyrhynchos_76_1.0   (Mallard)   404 401
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   523 522
Ficedula_albicollis_76_1.0   (Collared flycatcher)   334 333
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   701 694
Anolis_carolinensis_76_2.0   (Green anole)   434 432
Xenopus_laevis_   (African clawed frog)   349 349
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   839 836
Latimeria_chalumnae_76_1   (Coelacanth)   605 590
Lepisosteus_oculatus_76   (Spotted gar)   678 673
Gadus_morhua_76_1   (Atlantic cod)   541 524
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   524 522
Takifugu_rubripes_76_4   (Torafugu)   1538 1524
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   680 677
Oryzias_latipes_76_1   (Japanese medaka)   622 617
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   535 534
Poecilia_formosa_76   (Amazon molly)   614 590
Oreochromis_niloticus_76_1.0   (Nile tilapia)   718 714
Astyanax_mexicanus_76   (Mexican tetra)   616 598
Danio_rerio_76_9   (Zebrafish)   1082 1079
Oikopleura_dioica 56 56
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   149 146
Ciona_intestinalis_76   (Vase tunicate)   168 168
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1193 1165
Adineta_vaga 972 964
Octopus_bimaculoides_280 354 348
Crassostrea_gigas_22   (Pacific oyster)   475 461
Lottia_gigantea_   (Owl limpet)   339 336
Helobdella_robusta_ 260 252
Capitella_sp._I_ 1145 1138
Danaus_plexippus_OGS1.0   (Monarch butterfly)   112 110
Heliconius_melpomene_   (Postman butterfly)   111 104
Bombyx_mori_   (Domestic silkworm)   99 95
Nasonia_vitripennis_   (Jewel wasp)   49 48
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   278 272
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   78 76
Linepithema_humile_v1.1   (Argentine ant)   99 98
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   91 89
Solenopsis_invicta_v.2.2.3   (Red fire ant)   89 88
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   91 91
Atta_cephalotes_v1.1 111 109
Camponotus_floridanus_v3.3   (Florida carpenter ant)   87 85
Lucilia_cuprina   (Australian sheep blowfly)   89 83
Drosophila_grimshawi_1.3 100 94
Drosophila_willistoni_1.3 98 90
Drosophila_pseudoobscura_2.13 99 92
Drosophila_persimilis_1.3 85 84
Drosophila_suzukii 116 94
Drosophila_yakuba_1.3 109 103
Drosophila_simulans_1.3 88 86
Drosophila_sechellia_1.3 105 98
Drosophila_melanogaster_76_5   (Fruit fly)   211 196
Drosophila_erecta_1.3 103 98
Drosophila_ananassae_1.3 95 88
Drosophila_virilis_1.2 94 88
Drosophila_mojavensis_1.3 93 87
Megaselia_scalaris_22 53 50
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   101 98
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   129 121
Anopheles_darlingi_22   (American malaria mosquito)   73 70
Anopheles_gambiae_49_3j   (African malaria mosquito)   112 110
Tribolium_castaneum_3.0   (Red flour beetle)   110 109
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   93 91
Acyrthosiphon_pisum_   (Pea aphid)   62 61
Rhodnius_prolixus_22 93 91
Daphnia_pulex_   (Common water flea)   206 205
Strigamia_maritima_22 107 106
Sarcoptes_scabiei 76 69
Tetranychus_urticae_   (Two-spotted spider mite)   100 98
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   167 165
Pristionchus_pacificus_ 443 442
Meloidogyne_incognita_   (Southern root-knot nematode)   360 352
Meloidogyne_hapla_ 152 152
Onchocerca_volvulus_22 177 173
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   113 110
Caenorhabditis_japonica_ 449 441
Caenorhabditis_brenneri_ 911 876
Caenorhabditis_remanei_ 1139 1102
Caenorhabditis_elegans_76_235   (Roundworm)   1160 1154
Caenorhabditis_briggsae_2 858 830
Trichinella_spiralis_22 91 89
Hymenolepis_microstoma_ 64 64
Echinococcus_multilocularis_ 68 67
Echinococcus_granulosus_ 64 63
Taenia_solium_   (Pork tapeworm)   84 84
Schistosoma_mansoni_ 102 100
Mnemiopsis_leidyi   (Sea walnut)   794 769
Thelohanellus_kitauei 20 20
Acropora_digitifera_v1.0 195 194
Nematostella_vectensis_1.0   (Starlet sea anemone)   1151 1138
Hydra_vulgaris 102 102
Amphimedon_queenslandica 220 216
Trichoplax_adhaerens_ 424 423
Proterospongia_sp._ATCC_50818_ 4 4
Monosiga_brevicollis_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 11 11
Conidiobolus_coronatus_NRRL28638_v1.0 244 244
Phycomyces_blakesleeanus_ 1 1
Rhizomucor_miehei_CAU432_ 1 1
Sporisorium_reilianum_22 4 4
Ustilago_maydis_ 4 4
Mixia_osmundae_IAM_14324_v1.0 4 4
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6 6
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3 3
Melampsora_laricis-populina_ 6 6
Rhodotorula_graminis_WP1_v1.0 5 5
Sporobolomyces_roseus_IAM_13481_ 3 3
Microbotryum_violaceum_22 4 4
Wallemia_sebi_v1.0 2 2
Sphaerobolus_stellatus_v1.0 24 24
Piloderma_croceum_F_1598_v1.0 15 15
Serpula_lacrymans_var._lacrymans_S7.9_ 4 4
Coniophora_puteana 2 2
Hydnomerulius_pinastri_v2.0 2 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 2 2
Pisolithus_microcarpus_441_v1.0 2 2
Pisolithus_tinctorius_Marx_270_v1.0 9 9
Scleroderma_citrinum_Foug_A_v1.0 6 6
Coprinopsis_cinerea_okayama7_130_v3 3 3
Pleurotus_ostreatus_   (Oyster mushroom)   11 11
Amanita_thiersii_Skay4041_v1.0 1 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2 2
Galerina_marginata_v1.0 9 9
Hebeloma_cylindrosporum_h7_v2.0 6 6
Laccaria_bicolor_S238N-H82_ 6 6
Agaricus_bisporus_var._bisporus_ 1 1
Schizophyllum_commune_ 4 4
Stereum_hirsutum_FP-91666_SS1__v1.0 10 10
Heterobasidion_annosum_ 5 5
Gloeophyllum_trabeumv1.0 5 5
Punctularia_strigosozonata_v1.0 9 9
Sebacina_vermifera_MAFF_305830_v1.0 6 6
Fomitiporia_mediterranea_v1.0 3 3
Tulasnella_calospora_AL13/4D_v1.0 8 8
Postia_placenta_ 9 9
Wolfiporia_cocos_MD-104_SS10__v1.0 5 5
Fomitopsis_pinicolav1.0 11 11
Fomitopsis_pinicola_FP-58527_SS1_v3.0 9 9
Phanerochaete_chrysosporium_RP-78_2.1 7 7
Dichomitus_squalens 3 3
Trametes_versicolor_v1.0 3 3
Tremella_mesenterica_   (Witches' butter)   4 4
Daldinia_eschscholzii_EC12_v1.0 7 7
Apiospora_montagnei_NRRL_25634_v1.0 11 11
Magnaporthe_poae_ATCC_64411_22 7 7
Magnaporthe_grisea_70-15_ 8 8
Podospora_anserina_ 9 9
Sporotrichum_thermophile_ATCC_42464_ 9 9
Thielavia_terrestris_NRRL_8126_ 10 10
Chaetomium_globosum_CBS_148.51_ 7 7
Neurospora_tetrasperma_ 6 6
Neurospora_discreta_FGSC_8579_ 6 6
Neurospora_crassa_OR74A_ 6 6
Cryphonectria_parasitica_   (Chestnut blight fungus)   11 11
Verticillium_albo-atrum_VaMs.102_ 6 6
Verticillium_dahliae_VdLs.17_ 9 9
Acremonium_alcalophilumv_1.0 3 3
Glomerella_graminicola_22 12 12
Fusarium_graminearum_ 10 10
Nectria_haematococca_mpVI_ 15 15
Fusarium_oxysporum_f._sp._lycopersici_4286_ 13 13
Fusarium_verticillioides_7600_ 11 11
Trichoderma_asperellum_CBS_433.97_v1.0 6 6
Trichoderma_atroviride_ 6 6
Trichoderma_citrinoviride_v1.0 5 5
Trichoderma_reesei_1.2 5 5
Trichoderma_virens_Gv29-8_ 5 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 5 5
Trichoderma_harzianum_CBS_226.95_v1.0 6 6
Amorphotheca_resinae_v1.0   (Creosote fungus)   7 7
Botrytis_cinerea_B05.10_ 6 6
Sclerotinia_sclerotiorum_ 6 6
Blumeria_graminis_22 4 4
Didymella_exigua_CBS_183.55_v1.0 8 8
Leptosphaeria_maculans_22 7 7
Setosphaeria_turcica_v1.0 7 7
Cochliobolus_miyabeanus_ATCC_44560_v1.0 7 7
Cochliobolus_victoriae_FI3_v1.0 6 6
Cochliobolus_carbonum_26-R-13_v1.0 6 6
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   6 6
Alternaria_brassicicola_ 5 5
Cochliobolus_lunatus_m118_v2.0 7 7
Pyrenophora_teres_f._teres_22 6 6
Pyrenophora_tritici-repentis_ 6 6
Stagonospora_nodorum_ 6 6
Mycosphaerella_graminicola_IPO323_ 6 6
Zasmidium_cellare_ATCC_36951_v1.0 7 7
Dothistroma_septosporum 10 10
Septoria_musiva_v1.0 8 8
Mycosphaerella_fijiensis_CIRAD86_ 8 8
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 7 7
Paracoccidioides_brasiliensis_Pb18_ 3 3
Coccidioides_posadasii_RMSCC_3488_ 3 3
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 3 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 5 5
Trichophyton_equinum_CBS_127.97_ 5 5
Trichophyton_verrucosum_HKI_0517_ 5 5
Arthroderma_benhamiae_CBS_112371_ 5 5
Trichophyton_tonsurans_CBS_112818_ 5 5
Trichophyton_rubrum_CBS_118892_ 5 5
Uncinocarpus_reesii_1704_ 2 2
Aspergillus_zonatus_v1.0 4 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 6 6
Penicillium_chrysogenum_v1.0 6 6
Aspergillus_acidus_v1.0 5 5
Aspergillus_fumigatus_Af293 6 6
Aspergillus_brasiliensis_v1.0 6 6
Aspergillus_nidulans_FGSC_A4_ 4 4
Aspergillus_sydowii_v1.0 7 7
Aspergillus_versicolor_v1.0 6 6
Aspergillus_glaucus 7 7
Aspergillus_carbonarius_ITEM_5010_ 5 5
Neosartorya_fischeri_NRRL_181_ 6 6
Aspergillus_terreus_NIH2624_ 5 5
Aspergillus_tubingensis_v1.0 5 5
Aspergillus_wentii_v1.0 7 7
Aspergillus_oryzae_RIB40_ 3 3
Aspergillus_niger_22 5 5
Aspergillus_niger_ATCC_1015_ 5 5
Aspergillus_flavus_NRRL3357_ 4 4
Aspergillus_clavatus_NRRL_1_ 4 4
Penicillium_marneffei_ATCC_18224_ 7 7
Tuber_melanosporum_Mel28_22 3 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   4 4
Hansenula_polymorpha_v2.0 1 1
Dekkera_bruxellensis_CBS_2499_v2.0 3 3
Pichia_membranifaciensv1.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 3 3
Candida_tropicalis_MYA-3404_ 3 3
Candida_parapsilosis_ 3 3
Candida_albicans_SC5314 3 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 4 4
Wickerhamomyces_anomalus 3 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 2 2
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 3 3
Candida_glabrata_CBS138 4 4
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 2 2
Kluyveromyces_waltii 1 1
Zygosaccharomyces_rouxii_ 4 4
Saccharomyces_mikatae_MIT 4 4
Saccharomyces_paradoxus_MIT 4 4
Saccharomyces_cerevisiae_76   (Baker's yeast)   4 4
Saccharomyces_bayanus_MIT 3 3
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 24 24
Allomyces_macrogynus_ATCC_38327_ 21 21
Spizellomyces_punctatus_DAOM_BR117_ 24 24
Dictyostelium_discoideum 21 21
Dictyostelium_purpureum_ 13 13
Entamoeba_dispar_1.2 1 1
Selaginella_moellendorffii_ 2 2
Eucalyptus_grandis_v201   (Rose gum)   2 2
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 2 2
Citrus_clementina_v165 2 2
Citrus_sinensis_v154   (Sweet orange)   2 2
Thellungiella_halophila_v173 1 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1 1
Capsella_rubella_v183 1 1
Arabidopsis_lyrata_   (Lyrate rockcress)   1 1
Arabidopsis_thaliana_10   (Thale cress)   1 1
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   1 1
Phaseolus_vulgaris_v186   (French bean)   2 2
Glycine_max_v109   (Soybean)   2 2
Cucumis_sativus_v122   (Cucumber)   1 1
Fragaria_vesca_   (Wild strawberry)   1 1
Malus_domestica_v196   (Apple)   2 2
Prunus_persica_v139   (Peach)   1 1
Linum_usitatissimum_v200   (Flax)   2 2
Manihot_esculenta_v147   (Cassava)   1 1
Populus_trichocarpa_v156   (Black cottonwood)   1 1
Vitis_vinifera_   (Wine grape)   1 1
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Solanum_tuberosum_   (Potato)   2 2
Aquilegia_coerulea_v195 1 1
Triticum_aestivum_22   (Bread wheat)   3 3
Aegilops_tauschii_22 1 1
Brachypodium_distachyon_   (Stiff brome)   1 1
Oryza_barthii_22   (African wild rice)   1 1
Oryza_glumaepatula_22 1 1
Oryza_glaberrima   (African rice)   2 2
Oryza_punctata_22 1 1
Oryza_nivara_22 2 2
Oryza_brachyantha_22   (Malo sina)   1 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1 1
Oryza_sativa_v193   (Rice)   1 1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1 1
Panicum_virgatum_v202   (Switchgrass)   1 1
Setaria_italica_v164   (Foxtail millet)   1 1
Zea_mays_subsp._mays_   (Maize)   1 1
Zea_mays_v181   (Maize)   1 1
Sorghum_bicolor_   (Sorghum)   2 2
Musa_acuminata_22   (Wild Malaysian banana)   2 2
Amborella_trichopoda_22 1 1
Physcomitrella_patens 2 2
Coccomyxa_subellipsoidea_sp._C-169_v2 1 1
Asterochloris_sp._Cgr/DA1pho_v1.0 5 5
Chlorella_variabilis_sp._NC64A_ 1 1
Chlorella_vulgaris_ 1 1
Volvox_carteri_f._nagariensis_ 7 7
Volvox_carteri_v199 7 7
Chlamydomonas_reinhardtii_4.0 6 6
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_tauri_ 1 1
Bathycoccus_prasinos_ 2 2
Micromonas_sp._RCC299_ 2 2
Micromonas_pusilla_CCMP1545_v3.0 4 3
Thecamonas_trahens_ATCC_50062_ 7 7
Bigelowiella_natans_CCMP2755_22 7 7
Cyanophora_paradoxa_ 12 12
Trypanosoma_cruzi_strain_CL_Brener 1 1
Ectocarpus_siliculosus 2 2
Aureococcus_anophagefferens_ 3 3
Albugo_laibachii_22 14 14
Pythium_iwayamai_DAOM_BR242034_22 10 10
Pythium_arrhenomanes_ATCC_12531_22 10 10
Pythium_ultimum_v1.7-2 11 11
Pythium_aphanidermatum_DAOM_BR444_22 9 9
Pythium_irregulare_DAOM_BR486_22 12 12
Pythium_vexans_DAOM_BR484_22 8 8
Phytophthora_ramorum_1.1   (Sudden oak death agent)   13 13
Phytophthora_sojae_1.1 12 12
Phytophthora_infestans_T30-4_ 13 13
Phytophthora_capsici_ 4 4
Hyaloperonospora_arabidopsidis_22 6 6
Phaeodactylum_tricornutumCCAP_1055/1 3 3
Fragilariopsis_cylindrus 16 16
Thalassiosira_pseudonana_CCMP1335 3 3
Perkinsus_marinus_ATCC_50983_ 2 2
Paramecium_tetraurelia_ 16 16
Tetrahymena_thermophila_SB210_1_ 15 15
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Symbiodinium_minutum_clade_B1_v1.2 32 32
Naegleria_gruberi_ 5 5
Trichomonas_vaginalis_ 1 1
Guillardia_theta_CCMP2712_v1.0_ 43 43
Emiliania_huxleyi_CCMP1516_ 1 1
Gloeocapsa_sp._PCC_7428 1 1
Halothece_sp._PCC_7418 1 1
Gloeobacter_violaceus_PCC_7421 1 1
Nostoc_sp._PCC_7120 1 1
Rubrobacter_xylanophilus_DSM_9941 1 1
Geodermatophilus_obscurus_DSM_43160 1 1
Kineococcus_radiotolerans_SRS30216 1 1
Saccharopolyspora_erythraea_NRRL_2338 1 1
Roseiflexus_sp._RS-1 1 1
Truepera_radiovictrix_DSM_17093 4 4
Thermus_sp._CCB_US3_UF1 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sp._AT1b 1 1
Exiguobacterium_sibiricum_255-15 1 1
Haliscomenobacter_hydrossis_DSM_1100 1 1
Salinibacter_ruber_M8 4 4
Marivirga_tractuosa_DSM_4126 1 1
Spirosoma_linguale_DSM_74 2 2
Runella_slithyformis_DSM_19594 1 1
Krokinobacter_sp._4H-3-7-5 2 2
Polaribacter_sp._MED152 1 1
Phycisphaera_mikurensis_NBRC_102666 2 2
Isosphaera_pallida_ATCC_43644 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Dictyoglomus_thermophilum_H-6-12 1 1
Candidatus_Saccharimonas_aalborgensis 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_phymatum_STM815 1 1
Burkholderia_xenovorans_LB400 1 1
Burkholderia_sp._CCGE1002 1 1
Gallionella_capsiferriformans_ES-2 1 1
Candidatus_Puniceispirillum_marinum_IMCC1322 1 1
alpha_proteobacterium_HIMB5 1 1
alpha_proteobacterium_HIMB59 1 1
Candidatus_Pelagibacter_sp._IMCC9063 1 1
Methylobacterium_sp._4-46 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Photobacterium_profundum_SS9 1 1
Glaciecola_nitratireducens_FR1064 1 1
Spiribacter_sp._UAH-SP71 1 1
Legionella_pneumophila_str._Corby 1 1
Pantoea_vagans_C9-1 1 1
Pantoea_ananatis_LMG_20103 1 1
Thioalkalimicrobium_cyclicum_ALM1 1 1
Salinarchaeum_sp._Harcht-Bsk1 1 1
Halopiger_xanaduensis_SH-6 2 2
Haloterrigena_turkmenica_DSM_5511 1 1
Natrinema_sp._J7-2 2 2
Natrialba_magadii_ATCC_43099 4 4
Halorubrum_lacusprofundi_ATCC_49239 2 2
Haloquadratum_walsbyi_DSM_16790 3 3
Halomicrobium_mukohataei_DSM_12286 4 4
Halorhabdus_utahensis_DSM_12940 2 2
Natronomonas_pharaonis_DSM_2160 5 5
Haloarcula_hispanica_ATCC_33960 4 4
Haloarcula_marismortui_ATCC_43049 6 6
Halobacterium_salinarum_R1 4 4
Halobacterium_sp._NRC-1 4 4

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1321 1301
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   155 143
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   124 118
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   246 244
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1112 1107
Cryptococcus_neoformans_var._grubii_H99_ 3 3
Cryptococcus_neoformans_B-3501A_ 4 4
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb01_ 4 4
Paracoccidioides_brasiliensis_Pb03_ 3 3
Coccidioides_posadasii_str._Silveira_ 4 4
Coccidioides_immitis_RMSCC_3703_ 4 4
Coccidioides_immitis_RMSCC_2394_ 4 4
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 4 4
Histoplasma_capsulatum_H143 3 3
Histoplasma_capsulatum_H88 3 3
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 6 6
Candida_albicans_WO-1_ 4 4
Saccharomyces_cerevisiae_UC5 3 3
Saccharomyces_cerevisiae_PW5 3 3
Saccharomyces_cerevisiae_FL100 3 3
Saccharomyces_cerevisiae_CLIB324 2 2
Saccharomyces_cerevisiae_CBS7960 3 3
Saccharomyces_cerevisiae_YJM269 4 4
Saccharomyces_cerevisiae_T7 4 4
Saccharomyces_cerevisiae_FostersB 3 3
Saccharomyces_cerevisiae_FostersO 3 3
Saccharomyces_cerevisiae_VL3 4 4
Saccharomyces_cerevisiae_Vin13 3 3
Saccharomyces_cerevisiae_LalvinQA23 3 3
Saccharomyces_cerevisiae_AWRI796 3 3
Saccharomyces_cerevisiae_Sigma1278b 4 4
Saccharomyces_cerevisiae_W303 4 4
Saccharomyces_cerevisiae_JAY291 4 4
Saccharomyces_cerevisiae_AWRI1631 3 3
Saccharomyces_cerevisiae_YPS163 3 3
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 4 4
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 4 4
Saccharomyces_cerevisiae_YJM789 4 4
Saccharomyces_cerevisiae_RM11-1a 4 4
Saccharomyces_cerevisiae_RM11-1a_ 4 4
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   4 4
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 5 5
Batrachochytrium_dendrobatidis_JAM81_ 7 6
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1 1
Hordeum_vulgare_22   (Domesticated barley)   5 5
Chroococcidiopsis_thermalis_PCC_7203 2 2
Chamaesiphon_minutus_PCC_6605 2 2
Cyanothece_sp._PCC_7425 2 2
Cyanothece_sp._PCC_7424 1 1
Thermus_oshimai_JL-2 1 1
Thermus_thermophilus_JL-18 1 1
Streptococcus_salivarius_JIM8777 1 1
Exiguobacterium_antarcticum_B7 1 1
Salinibacter_ruber_DSM_13855 4 4
Nonlabens_dokdonensis_DSW-6 2 2
Psychroflexus_torquis_ATCC_700755 1 1
Burkholderia_phenoliruptrix_BR3459a 1 1
Burkholderia_sp._CCGE1003 1 1
Burkholderia_sp._CCGE1001 1 1
Nitrosomonas_sp._AL212 1 1
Octadecabacter_antarcticus_307 1 1
Octadecabacter_arcticus_238 1 1
Candidatus_Pelagibacter_ubique_HTCC1062 1 1
Glaciecola_psychrophila_170 1 1
Spiribacter_salinus_M19-40 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1
Pantoea_ananatis_LMG_5342 1 1
Pantoea_ananatis_PA13 1 1
Pantoea_ananatis_AJ13355 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Pseudomonas_poae_RE*1-1-14 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Halovivax_ruber_XH-70 1 1
Natrinema_pellirubrum_DSM_15624 2 2
Natronobacterium_gregoryi_SP2 6 6
Haloquadratum_walsbyi_C23 3 3
Halorhabdus_tiamatea_SARL4B 2 2
Natronomonas_moolapensis_8.8.11 3 3
Haloarcula_hispanica_N601 4 4

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   869 867
Pan_troglodytes_69_2.1.4   (Chimpanzee)   599 598
Gorilla_gorilla_69_3.1   (Western gorilla)   713 710
Pongo_abelii_69_2   (Sumatran orangutan)   576 574
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   445 444
Macaca_mulatta_69_1   (Rhesus monkey)   674 670
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   651 648
Otolemur_garnettii_69_3   (Small-eared galago)   1037 1034
Microcebus_murinus_69_1   (Gray mouse lemur)   515 492
Rattus_norvegicus_69_3.4   (Norway rat)   1662 1657
Mus_musculus_69_38   (House mouse)   1722 1720
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   557 540
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1181 1177
Cavia_porcellus_69_3   (Domestic guinea pig)   1127 1125
Oryctolagus_cuniculus_69_2   (Rabbit)   1175 1174
Ochotona_princeps_69   (American pika)   432 412
Tupaia_belangeri_69   (Northern tree shrew)   663 636
Sus_scrofa_69_10.2   (Pig)   1439 1434
Bos_taurus_69_3.1   (Cattle)   1333 1328
Vicugna_pacos_69_1   (Alpaca)   449 420
Tursiops_truncatus_69_1   (Bottlenose dolphin)   243 234
Mustela_putorius_furo_69_1.0   (Domestic ferret)   995 994
Ailuropoda_melanoleuca_69_1   (Giant panda)   1087 1084
Canis_familiaris_69_3.1   (Dog)   875 874
Felis_catus_69   (Domestic cat)   446 424
Equus_caballus_69_2   (Horse)   1273 1268
Myotis_lucifugus_69_2.0   (Little brown bat)   790 784
Pteropus_vampyrus_69_1   (Large flying fox)   540 525
Sorex_araneus_69_1   (European shrew)   579 559
Erinaceus_europaeus_69   (Western European hedgehog)   580 556
Procavia_capensis_69_1   (Cape rock hyrax)   481 466
Loxodonta_africana_69_3   (African savanna elephant)   2282 2280
Echinops_telfairi_69   (Small Madagascar hedgehog)   579 548
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   652 624
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   610 590
Macropus_eugenii_69_1.0   (Tammar wallaby)   715 690
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1098 1095
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1333 1320
Ornithorhynchus_anatinus_69_5   (Platypus)   1150 1145
Petromyzon_marinus_69_7.0   (Sea lamprey)   231 229
Meleagris_gallopavo_69_2   (Turkey)   306 305
Gallus_gallus_69_2   (Chicken)   564 560
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   518 517
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   670 663
Anolis_carolinensis_69_2.0   (Green anole)   425 423
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   788 785
Latimeria_chalumnae_69_1   (Coelacanth)   575 560
Gadus_morhua_69_1   (Atlantic cod)   464 447
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   472 470
Takifugu_rubripes_69_4   (Torafugu)   494 483
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   543 540
Oryzias_latipes_69_1   (Japanese medaka)   506 501
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   532 531
Oreochromis_niloticus_69_1.0   (Nile tilapia)   639 636
Danio_rerio_69_9   (Zebrafish)   802 800
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   93 90
Ciona_intestinalis_69   (Vase tunicate)   162 162
Drosophila_melanogaster_69_5   (Fruit fly)   95 88
Caenorhabditis_elegans_69_215   (Roundworm)   1034 1031
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   4 4
Arabidopsis_thaliana_10   (Thale cress)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1500 1497
Homo_sapiens__(NCBI_version)   (Human)   897 896
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1720 1716
Heliconius_numata__(Incomplete) 7 7
Loa_loa_v3.3_(Request)   (Eye worm)   113 109
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   100 100
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   53 51
Lotus_japonicus__(Early_assembly) 1 1
Malus_x_domestica_(Duplicate)   (Apple)   2 2
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
Nicotiana_benthamiana_0.4.4_(Early_draft) 1 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
PDB_chains_(SCOP_1.75)_(PDB) 43 43
STRING_v9.0.5_(STRING) 31392 30993
Uniprot_2018_03_genome 220865 217479
NCBI_viral_sequences_(Viral) 90 90
NCBI_2017_08_genome 283525 280895
TargetDB__(Targets) 525 524
Protozoadb_2010_08_(Protozoadb) 7 7
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1271 1271
Protein_Data_Bank_(all_PDB_sequenc) 703 703
UniProt__viral_sequences_(Viral) 311 311

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