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Domain combinations for GAT-like domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a GAT-like domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   53 53
Pan_troglodytes_76_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_76_3.1   (Western gorilla)   13 13
Pongo_abelii_76_2   (Sumatran orangutan)   8 8
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   10 10
Papio_anubis_76   (Olive baboon)   8 8
Macaca_mulatta_76_1   (Rhesus monkey)   19 19
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   34 34
Otolemur_garnettii_76_3   (Small-eared galago)   9 9
Microcebus_murinus_76_1   (Gray mouse lemur)   8 8
Rattus_norvegicus_76_5.0   (Norway rat)   8 8
Mus_musculus_76_38   (House mouse)   25 25
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   8 8
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   10 10
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   8 8
Cavia_porcellus_76_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_76_2   (Rabbit)   10 10
Ochotona_princeps_76   (American pika)   9 8
Tupaia_belangeri_76   (Northern tree shrew)   7 7
Sus_scrofa_76_10.2   (Pig)   8 8
Bos_taurus_76_3.1   (Cattle)   11 11
Ovis_aries_76_3.1   (Sheep)   11 11
Vicugna_pacos_76_1   (Alpaca)   5 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   8 8
Mustela_putorius_furo_76_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_76_1   (Giant panda)   12 12
Canis_familiaris_76_3.1   (Dog)   16 16
Felis_catus_76_6.2   (Domestic cat)   9 9
Equus_caballus_76_2   (Horse)   11 11
Myotis_lucifugus_76_2.0   (Little brown bat)   9 9
Pteropus_vampyrus_76_1   (Large flying fox)   8 8
Sorex_araneus_76_1   (European shrew)   4 4
Erinaceus_europaeus_76   (Western European hedgehog)   8 8
Procavia_capensis_76_1   (Cape rock hyrax)   8 8
Loxodonta_africana_76_3   (African savanna elephant)   12 12
Echinops_telfairi_76   (Small Madagascar hedgehog)   7 6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   13 12
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   6 5
Macropus_eugenii_76_1.0   (Tammar wallaby)   8 8
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   11 11
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   9 9
Ornithorhynchus_anatinus_76_5   (Platypus)   10 10
Saccoglossus_kowalevskii_v3.0 31 31
Petromyzon_marinus_76_7.0   (Sea lamprey)   8 8
Meleagris_gallopavo_76_2   (Turkey)   22 22
Gallus_gallus_76_4   (Chicken)   12 12
Anas_platyrhynchos_76_1.0   (Mallard)   9 9
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   9 9
Ficedula_albicollis_76_1.0   (Collared flycatcher)   9 9
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   14 14
Anolis_carolinensis_76_2.0   (Green anole)   11 11
Xenopus_laevis_   (African clawed frog)   13 13
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   13 13
Latimeria_chalumnae_76_1   (Coelacanth)   10 10
Lepisosteus_oculatus_76   (Spotted gar)   9 9
Gadus_morhua_76_1   (Atlantic cod)   14 14
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   23 23
Takifugu_rubripes_76_4   (Torafugu)   69 69
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   21 21
Oryzias_latipes_76_1   (Japanese medaka)   14 14
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   13 13
Poecilia_formosa_76   (Amazon molly)   14 14
Oreochromis_niloticus_76_1.0   (Nile tilapia)   22 22
Astyanax_mexicanus_76   (Mexican tetra)   13 13
Danio_rerio_76_9   (Zebrafish)   25 25
Oikopleura_dioica 3 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_76   (Vase tunicate)   4 4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   4 4
Adineta_vaga 13 13
Octopus_bimaculoides_280 10 10
Crassostrea_gigas_22   (Pacific oyster)   3 3
Lottia_gigantea_   (Owl limpet)   3 3
Helobdella_robusta_ 6 6
Capitella_sp._I_ 4 4
Danaus_plexippus_OGS1.0   (Monarch butterfly)   3 3
Heliconius_melpomene_   (Postman butterfly)   2 2
Bombyx_mori_   (Domestic silkworm)   3 3
Nasonia_vitripennis_   (Jewel wasp)   3 3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   9 9
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3 3
Linepithema_humile_v1.1   (Argentine ant)   3 3
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3 3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3 3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2 2
Atta_cephalotes_v1.1 3 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3 3
Lucilia_cuprina   (Australian sheep blowfly)   2 2
Drosophila_grimshawi_1.3 3 3
Drosophila_willistoni_1.3 3 3
Drosophila_pseudoobscura_2.13 3 3
Drosophila_persimilis_1.3 3 3
Drosophila_suzukii 3 3
Drosophila_yakuba_1.3 3 3
Drosophila_simulans_1.3 2 2
Drosophila_sechellia_1.3 2 2
Drosophila_melanogaster_76_5   (Fruit fly)   10 10
Drosophila_erecta_1.3 3 3
Drosophila_ananassae_1.3 3 3
Drosophila_virilis_1.2 3 3
Drosophila_mojavensis_1.3 3 3
Megaselia_scalaris_22 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   3 3
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3 3
Anopheles_darlingi_22   (American malaria mosquito)   2 2
Anopheles_gambiae_49_3j   (African malaria mosquito)   4 4
Tribolium_castaneum_3.0   (Red flour beetle)   4 4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   4 4
Acyrthosiphon_pisum_   (Pea aphid)   3 3
Rhodnius_prolixus_22 3 3
Daphnia_pulex_   (Common water flea)   3 3
Strigamia_maritima_22 3 3
Sarcoptes_scabiei 2 2
Tetranychus_urticae_   (Two-spotted spider mite)   3 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   4 4
Pristionchus_pacificus_ 2 2
Meloidogyne_incognita_   (Southern root-knot nematode)   4 4
Meloidogyne_hapla_ 2 2
Onchocerca_volvulus_22 2 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   3 3
Caenorhabditis_japonica_ 3 3
Caenorhabditis_brenneri_ 4 4
Caenorhabditis_remanei_ 3 3
Caenorhabditis_elegans_76_235   (Roundworm)   12 12
Caenorhabditis_briggsae_2 3 3
Trichinella_spiralis_22 2 2
Hymenolepis_microstoma_ 4 4
Echinococcus_multilocularis_ 7 7
Echinococcus_granulosus_ 3 3
Taenia_solium_   (Pork tapeworm)   4 4
Schistosoma_mansoni_ 4 4
Mnemiopsis_leidyi   (Sea walnut)   3 3
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 3 3
Nematostella_vectensis_1.0   (Starlet sea anemone)   3 3
Hydra_vulgaris 4 4
Amphimedon_queenslandica 5 5
Trichoplax_adhaerens_ 3 3
Proterospongia_sp._ATCC_50818_ 3 3
Monosiga_brevicollis_ 3 3
Sphaeroforma_arctica_JP610_ 5 5
Capsaspora_owczarzaki_ATCC_30864_ 3 3
Conidiobolus_coronatus_NRRL28638_v1.0 3 3
Mortierella_verticillata_NRRL_6337_ 5 5
Phycomyces_blakesleeanus_ 10 10
Rhizopus_oryzae_RA_99-880_ 9 9
Mucor_circinelloides_ 8 8
Rhizomucor_miehei_CAU432_ 8 8
Malassezia_globosa_CBS_7966_ 8 8
Sporisorium_reilianum_22 6 6
Ustilago_maydis_ 5 5
Mixia_osmundae_IAM_14324_v1.0 5 5
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 5 5
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 5 5
Melampsora_laricis-populina_ 5 5
Rhodotorula_graminis_WP1_v1.0 3 3
Sporobolomyces_roseus_IAM_13481_ 2 2
Microbotryum_violaceum_22 4 4
Wallemia_sebi_v1.0 3 3
Sphaerobolus_stellatus_v1.0 6 6
Piloderma_croceum_F_1598_v1.0 6 6
Serpula_lacrymans_var._lacrymans_S7.9_ 4 4
Coniophora_puteana 5 5
Hydnomerulius_pinastri_v2.0 7 7
Paxillus_rubicundulus_Ve08.2h10_v1.0 6 6
Pisolithus_microcarpus_441_v1.0 5 5
Pisolithus_tinctorius_Marx_270_v1.0 5 5
Scleroderma_citrinum_Foug_A_v1.0 5 5
Coprinopsis_cinerea_okayama7_130_v3 6 6
Pleurotus_ostreatus_   (Oyster mushroom)   5 5
Amanita_thiersii_Skay4041_v1.0 6 6
Amanita_muscaria_Koide_v1.0   (Fly agaric)   6 6
Galerina_marginata_v1.0 6 6
Hebeloma_cylindrosporum_h7_v2.0 6 6
Laccaria_bicolor_S238N-H82_ 7 7
Agaricus_bisporus_var._bisporus_ 4 4
Schizophyllum_commune_ 6 6
Stereum_hirsutum_FP-91666_SS1__v1.0 6 6
Heterobasidion_annosum_ 6 6
Gloeophyllum_trabeumv1.0 6 6
Punctularia_strigosozonata_v1.0 6 6
Sebacina_vermifera_MAFF_305830_v1.0 6 6
Fomitiporia_mediterranea_v1.0 6 6
Tulasnella_calospora_AL13/4D_v1.0 6 6
Postia_placenta_ 14 12
Wolfiporia_cocos_MD-104_SS10__v1.0 7 6
Fomitopsis_pinicolav1.0 9 9
Fomitopsis_pinicola_FP-58527_SS1_v3.0 9 9
Phanerochaete_chrysosporium_RP-78_2.1 4 4
Dichomitus_squalens 7 7
Trametes_versicolor_v1.0 6 6
Tremella_mesenterica_   (Witches' butter)   4 4
Daldinia_eschscholzii_EC12_v1.0 4 4
Apiospora_montagnei_NRRL_25634_v1.0 4 4
Magnaporthe_poae_ATCC_64411_22 3 3
Magnaporthe_grisea_70-15_ 4 4
Podospora_anserina_ 3 3
Sporotrichum_thermophile_ATCC_42464_ 4 4
Thielavia_terrestris_NRRL_8126_ 4 4
Chaetomium_globosum_CBS_148.51_ 3 3
Neurospora_tetrasperma_ 4 4
Neurospora_discreta_FGSC_8579_ 4 4
Neurospora_crassa_OR74A_ 5 5
Cryphonectria_parasitica_   (Chestnut blight fungus)   4 4
Verticillium_albo-atrum_VaMs.102_ 3 3
Verticillium_dahliae_VdLs.17_ 4 4
Acremonium_alcalophilumv_1.0 4 4
Glomerella_graminicola_22 4 4
Fusarium_graminearum_ 5 5
Nectria_haematococca_mpVI_ 4 4
Fusarium_oxysporum_f._sp._lycopersici_4286_ 5 5
Fusarium_verticillioides_7600_ 5 5
Trichoderma_asperellum_CBS_433.97_v1.0 4 4
Trichoderma_atroviride_ 4 4
Trichoderma_citrinoviride_v1.0 5 5
Trichoderma_reesei_1.2 5 5
Trichoderma_virens_Gv29-8_ 5 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 5 5
Trichoderma_harzianum_CBS_226.95_v1.0 5 5
Amorphotheca_resinae_v1.0   (Creosote fungus)   4 4
Botrytis_cinerea_B05.10_ 4 4
Sclerotinia_sclerotiorum_ 3 3
Blumeria_graminis_22 4 4
Didymella_exigua_CBS_183.55_v1.0 4 4
Leptosphaeria_maculans_22 5 5
Setosphaeria_turcica_v1.0 5 5
Cochliobolus_miyabeanus_ATCC_44560_v1.0 5 5
Cochliobolus_victoriae_FI3_v1.0 5 5
Cochliobolus_carbonum_26-R-13_v1.0 5 5
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   5 5
Alternaria_brassicicola_ 5 5
Cochliobolus_lunatus_m118_v2.0 5 5
Pyrenophora_teres_f._teres_22 5 5
Pyrenophora_tritici-repentis_ 5 5
Stagonospora_nodorum_ 5 5
Mycosphaerella_graminicola_IPO323_ 4 4
Zasmidium_cellare_ATCC_36951_v1.0 4 4
Dothistroma_septosporum 4 4
Septoria_musiva_v1.0 4 4
Mycosphaerella_fijiensis_CIRAD86_ 4 4
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4 4
Paracoccidioides_brasiliensis_Pb18_ 5 5
Coccidioides_posadasii_RMSCC_3488_ 4 4
Coccidioides_immitis_RS_ 4 4
Ajellomyces_dermatitidis_SLH14081_ 5 5
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 5 5
Microsporum_canis_CBS_113480_ 5 5
Trichophyton_equinum_CBS_127.97_ 4 4
Trichophyton_verrucosum_HKI_0517_ 4 4
Arthroderma_benhamiae_CBS_112371_ 4 4
Trichophyton_tonsurans_CBS_112818_ 4 4
Trichophyton_rubrum_CBS_118892_ 5 5
Uncinocarpus_reesii_1704_ 5 5
Aspergillus_zonatus_v1.0 4 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 4 4
Penicillium_chrysogenum_v1.0 5 5
Aspergillus_acidus_v1.0 4 4
Aspergillus_fumigatus_Af293 4 4
Aspergillus_brasiliensis_v1.0 4 4
Aspergillus_nidulans_FGSC_A4_ 5 5
Aspergillus_sydowii_v1.0 5 5
Aspergillus_versicolor_v1.0 5 5
Aspergillus_glaucus 4 4
Aspergillus_carbonarius_ITEM_5010_ 4 4
Neosartorya_fischeri_NRRL_181_ 4 4
Aspergillus_terreus_NIH2624_ 4 4
Aspergillus_tubingensis_v1.0 5 5
Aspergillus_wentii_v1.0 5 5
Aspergillus_oryzae_RIB40_ 4 4
Aspergillus_niger_22 4 4
Aspergillus_niger_ATCC_1015_ 2 2
Aspergillus_flavus_NRRL3357_ 5 5
Aspergillus_clavatus_NRRL_1_ 4 4
Penicillium_marneffei_ATCC_18224_ 9 9
Tuber_melanosporum_Mel28_22 4 4
Tuber_melanosporum_Vittad_   (Perigord truffle)   4 4
Hansenula_polymorpha_v2.0 3 3
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Pichia_membranifaciensv1.0 3 3
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3 3
Candida_dubliniensis_CD36_ 3 3
Candida_tropicalis_MYA-3404_ 3 3
Candida_parapsilosis_ 3 3
Candida_albicans_SC5314 5 5
Lodderomyces_elongisporus_NRRL_YB-4239_ 3 3
Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 3
Pichia_stipitis_CBS_6054_ 3 3
Candida_guilliermondii_ATCC_6260_ 3 3
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3 3
Debaromyces_hansenii 3 3
Wickerhamomyces_anomalus 3 3
Pichia_pastoris_GS115_ 3 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3 3
Yarrowia_lipolytica_CLIB122 5 5
Candida_lusitaniae_ATCC_42720_ 3 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 3
Vanderwaltozyma_polyspora_DSM_70294_ 2 2
Candida_glabrata_CBS138 4 4
Kluyveromyces_thermotolerans_CBS_6340 3 3
Lachancea_kluyveri_ 3 3
Kluyveromyces_waltii 3 3
Ashbya_gossypii_ATCC_10895_ 3 3
Zygosaccharomyces_rouxii_ 3 3
Saccharomyces_mikatae_MIT 5 5
Saccharomyces_paradoxus_MIT 5 5
Saccharomyces_cerevisiae_76   (Baker's yeast)   5 5
Saccharomyces_bayanus_MIT 5 5
Kluyveromyces_lactis 3 3
Schizosaccharomyces_cryophilus_OY26_22 4 4
Schizosaccharomyces_octosporus_yFS286_ 4 4
Schizosaccharomyces_japonicus_yFS275_ 5 5
Schizosaccharomyces_pombe   (Fission yeast)   6 6
Catenaria_anguillulae_PL171_v1.0 4 4
Allomyces_macrogynus_ATCC_38327_ 4 4
Spizellomyces_punctatus_DAOM_BR117_ 5 5
Dictyostelium_discoideum 3 3
Dictyostelium_purpureum_ 3 3
Selaginella_moellendorffii_ 13 13
Pinus_taeda   (Loblolly pine)   14 14
Picea_abies   (Norway spruce)   11 11
Eucalyptus_grandis_v201   (Rose gum)   40 39
Theobroma_cacao_B97-61/B2_v1   (Cacao)   17 17
Gossypium_raimondii_v221 85 85
Citrus_clementina_v165 20 20
Citrus_sinensis_v154   (Sweet orange)   33 33
Thellungiella_halophila_v173 27 27
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   41 41
Capsella_rubella_v183 26 26
Arabidopsis_lyrata_   (Lyrate rockcress)   25 25
Arabidopsis_thaliana_10   (Thale cress)   28 28
Carica_papaya_   (Papaya)   15 15
Medicago_truncatula_   (Barrel medic)   29 29
Phaseolus_vulgaris_v186   (French bean)   27 27
Glycine_max_v109   (Soybean)   47 47
Cucumis_sativus_v122   (Cucumber)   22 22
Fragaria_vesca_   (Wild strawberry)   16 16
Malus_domestica_v196   (Apple)   35 34
Prunus_persica_v139   (Peach)   17 17
Linum_usitatissimum_v200   (Flax)   40 40
Manihot_esculenta_v147   (Cassava)   31 31
Populus_trichocarpa_v156   (Black cottonwood)   35 35
Vitis_vinifera_   (Wine grape)   16 16
Mimulus_guttatus_v140   (Spotted monkey flower)   27 27
Solanum_lycopersicum_v.2.3   (Tomato)   22 22
Solanum_tuberosum_   (Potato)   20 20
Actinidia_chinensis_Hongyang_ 28 28
Aquilegia_coerulea_v195 36 36
Triticum_urartu_22 21 20
Triticum_aestivum_22   (Bread wheat)   62 62
Aegilops_tauschii_22 22 21
Brachypodium_distachyon_   (Stiff brome)   24 24
Oryza_barthii_22   (African wild rice)   27 27
Oryza_meridionalis_22 29 29
Oryza_glumaepatula_22 36 36
Oryza_glaberrima   (African rice)   23 23
Oryza_punctata_22 27 27
Oryza_nivara_22 35 35
Oryza_brachyantha_22   (Malo sina)   23 23
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   40 40
Oryza_sativa_v193   (Rice)   40 40
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   30 30
Panicum_virgatum_v202   (Switchgrass)   51 51
Setaria_italica_v164   (Foxtail millet)   29 29
Zea_mays_subsp._mays_   (Maize)   61 61
Zea_mays_v181   (Maize)   64 64
Sorghum_bicolor_   (Sorghum)   29 21
Musa_balbisiana   (Balbis banana)   38 38
Musa_acuminata_22   (Wild Malaysian banana)   36 36
Amborella_trichopoda_22 18 18
Physcomitrella_patens 9 9
Coccomyxa_subellipsoidea_sp._C-169_v2 2 2
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 1 1
Chlorella_vulgaris_ 2 2
Volvox_carteri_f._nagariensis_ 2 2
Volvox_carteri_v199 3 3
Chlamydomonas_reinhardtii_4.0 1 1
Ostreococcus_sp._RCC809_ 2 2
Ostreococcus_lucimarinus_CCE9901_ 2 2
Ostreococcus_tauri_ 2 2
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Cyanidioschyzon_merolae_strain_10D_22 3 3
Cyanidioschyzon_merolae 3 3
Porphyridium_purpureum_02_2012 2 2
Thecamonas_trahens_ATCC_50062_ 2 2
Bigelowiella_natans_CCMP2755_22 2 2
Cyanophora_paradoxa_ 3 3
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_vivax_ 1 1
Trypanosoma_cruzi_strain_CL_Brener 1 1
Trypanosoma_congolense_2.4 1 1
Trypanosoma_brucei_gambiense_v4.1 1 1
Trypanosoma_brucei_TREU927_v4.1 1 1
Ectocarpus_siliculosus 2 2
Aureococcus_anophagefferens_ 1 1
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 2 2
Pythium_ultimum_v1.7-2 2 2
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2 2
Phytophthora_sojae_1.1 3 3
Phytophthora_infestans_T30-4_ 2 2
Hyaloperonospora_arabidopsidis_22 3 3
Phaeodactylum_tricornutumCCAP_1055/1 2 2
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 1 1
Paramecium_tetraurelia_ 19 19
Tetrahymena_thermophila_SB210_1_ 5 5
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Naegleria_gruberi_ 2 2
Trichomonas_vaginalis_ 1 1
Guillardia_theta_CCMP2712_v1.0_ 5 5

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   15 15
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   5 5
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   4 4
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3 3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   10 10
Cryptococcus_neoformans_var._grubii_H99_ 4 4
Cryptococcus_neoformans_B-3501A_ 4 4
Cryptococcus_neoformans_JEC21_ 4 4
Paracoccidioides_brasiliensis_Pb01_ 4 4
Paracoccidioides_brasiliensis_Pb03_ 4 4
Coccidioides_posadasii_str._Silveira_ 4 4
Coccidioides_immitis_RMSCC_3703_ 3 3
Coccidioides_immitis_RMSCC_2394_ 4 4
Coccidioides_immitis_H538.4_ 4 4
Ajellomyces_dermatitidis_ER-3_ 5 5
Histoplasma_capsulatum_H143 5 5
Histoplasma_capsulatum_H88 5 5
Histoplasma_capsulatum_G186AR 5 5
Aspergillus_fumigatus_A1163_ 4 4
Candida_albicans_WO-1_ 3 3
Saccharomyces_cerevisiae_UC5 5 5
Saccharomyces_cerevisiae_PW5 4 4
Saccharomyces_cerevisiae_FL100 3 3
Saccharomyces_cerevisiae_CLIB324 4 4
Saccharomyces_cerevisiae_CBS7960 5 5
Saccharomyces_cerevisiae_YJM269 3 3
Saccharomyces_cerevisiae_T7 5 5
Saccharomyces_cerevisiae_FostersB 5 5
Saccharomyces_cerevisiae_FostersO 4 4
Saccharomyces_cerevisiae_VL3 4 4
Saccharomyces_cerevisiae_Vin13 4 4
Saccharomyces_cerevisiae_LalvinQA23 3 3
Saccharomyces_cerevisiae_AWRI796 4 4
Saccharomyces_cerevisiae_Sigma1278b 5 5
Saccharomyces_cerevisiae_W303 5 5
Saccharomyces_cerevisiae_JAY291 5 5
Saccharomyces_cerevisiae_AWRI1631 3 3
Saccharomyces_cerevisiae_YPS163 3 3
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 4 4
Saccharomyces_cerevisiae_CLIB215 4 4
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 5 5
Saccharomyces_cerevisiae_YJM789 5 5
Saccharomyces_cerevisiae_RM11-1a 5 5
Saccharomyces_cerevisiae_RM11-1a_ 5 5
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   5 5
Schizosaccharomyces_pombe_972h-_ 6 6
Batrachochytrium_dendrobatidis_JEL423_ 4 4
Batrachochytrium_dendrobatidis_JAM81_ 4 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   17 17
Hordeum_vulgare_22   (Domesticated barley)   49 49
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   22 22
Trypanosoma_brucei_Lister_427_v4.1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Natronobacterium_gregoryi_SP2 2 2

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   9 9
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_69_3.1   (Western gorilla)   8 8
Pongo_abelii_69_2   (Sumatran orangutan)   8 8
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   8 8
Macaca_mulatta_69_1   (Rhesus monkey)   8 8
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8 8
Otolemur_garnettii_69_3   (Small-eared galago)   9 9
Microcebus_murinus_69_1   (Gray mouse lemur)   8 8
Rattus_norvegicus_69_3.4   (Norway rat)   9 9
Mus_musculus_69_38   (House mouse)   9 9
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   8 8
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   8 8
Cavia_porcellus_69_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_69_2   (Rabbit)   8 8
Ochotona_princeps_69   (American pika)   9 8
Tupaia_belangeri_69   (Northern tree shrew)   7 7
Sus_scrofa_69_10.2   (Pig)   7 7
Bos_taurus_69_3.1   (Cattle)   9 9
Vicugna_pacos_69_1   (Alpaca)   5 5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   8 8
Mustela_putorius_furo_69_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_69_1   (Giant panda)   9 9
Canis_familiaris_69_3.1   (Dog)   9 9
Felis_catus_69   (Domestic cat)   8 8
Equus_caballus_69_2   (Horse)   9 9
Myotis_lucifugus_69_2.0   (Little brown bat)   9 9
Pteropus_vampyrus_69_1   (Large flying fox)   8 8
Sorex_araneus_69_1   (European shrew)   4 4
Erinaceus_europaeus_69   (Western European hedgehog)   8 8
Procavia_capensis_69_1   (Cape rock hyrax)   8 8
Loxodonta_africana_69_3   (African savanna elephant)   9 9
Echinops_telfairi_69   (Small Madagascar hedgehog)   7 6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   8 8
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   6 5
Macropus_eugenii_69_1.0   (Tammar wallaby)   8 8
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   9 9
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   9 9
Ornithorhynchus_anatinus_69_5   (Platypus)   9 9
Petromyzon_marinus_69_7.0   (Sea lamprey)   7 7
Meleagris_gallopavo_69_2   (Turkey)   9 9
Gallus_gallus_69_2   (Chicken)   9 9
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   9 9
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   9 9
Anolis_carolinensis_69_2.0   (Green anole)   9 9
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   8 8
Latimeria_chalumnae_69_1   (Coelacanth)   8 8
Gadus_morhua_69_1   (Atlantic cod)   14 14
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   15 15
Takifugu_rubripes_69_4   (Torafugu)   15 15
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   14 14
Oryzias_latipes_69_1   (Japanese medaka)   12 12
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   13 13
Oreochromis_niloticus_69_1.0   (Nile tilapia)   15 15
Danio_rerio_69_9   (Zebrafish)   12 12
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_69   (Vase tunicate)   3 3
Drosophila_melanogaster_69_5   (Fruit fly)   3 3
Caenorhabditis_elegans_69_215   (Roundworm)   3 3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   5 5
Arabidopsis_thaliana_10   (Thale cress)   24 24

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   60 60
Homo_sapiens__(NCBI_version)   (Human)   24 24
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   9 9
Loa_loa_v3.3_(Request)   (Eye worm)   2 2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2 2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2 2
Moniliophthora_perniciosa_FA553__(Genome_survey) 2 2
Picea_sitchensis__(Incomplete)   (Sitka spruce)   2 2
Lotus_japonicus__(Early_assembly) 20 20
Malus_x_domestica_(Duplicate)   (Apple)   35 34
Ricinus_communis__(Early_assembly)   (Castor bean)   15 15
Nicotiana_benthamiana_0.4.4_(Early_draft) 40 39
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   22 22
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   22 22
Phoenix_dactylifera__(Early_draft)   (Date palm)   18 18
PDB_chains_(SCOP_1.75)_(PDB) 11 11
NCBI_2017_08_genome 14270 14252
Protein_Data_Bank_(all_PDB_sequenc) 28 28
TargetDB__(Targets) 19 19
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 83 83
Protozoadb_2010_08_(Protozoadb) 9 9
STRING_v9.0.5_(STRING) 694 691
Uniprot_2018_03_genome 10888 10853

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