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Domain combination pairs in Prochlorococcus marinus str. MIT 9515

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

391 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 169
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 104
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 73
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
P-loop containing nucleoside triphosphate hydrolases Translation proteins 65
Actin-like ATPase domain Actin-like ATPase domain 65
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 51
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 51
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 53
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 43
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 41
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 41
PreATP-grasp domain Rudiment single hybrid motif 41
Translation proteins EF-G C-terminal domain-like 43
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 43
PurM N-terminal domain-like PurM C-terminal domain-like 43
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
PLP-binding barrel Alanine racemase C-terminal domain-like 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 32
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 31
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
ACT-like ACT-like 33
CheY-like C-terminal effector domain of the bipartite response regulators 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 33
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 33
Thioredoxin-like GST C-terminal domain-like 32
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Metallo-hydrolase/oxidoreductase Flavoproteins 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Alpha-L RNA-binding motif Pseudouridine synthase 21
GroEL equatorial domain-like GroEL apical domain-like 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
E set domains Glycosyl hydrolase domain 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Flavoproteins FMN-binding split barrel 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
E set domains (Trans)glycosidases 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
Trypsin-like serine proteases PDZ domain-like 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
L30e-like alpha/beta knot 22
MetI-like MetI-like 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
Metallo-hydrolase/oxidoreductase FMN-binding split barrel 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
PDZ domain-like ClpP/crotonase 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 21
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 22
(Trans)glycosidases Glycosyl hydrolase domain 22
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 21
Carbamate kinase-like PUA domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
MgtE N-terminal domain-like CBS-domain pair 11
PRC-barrel domain PRC-barrel domain 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
LysM domain LysM domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
alpha/beta knot IpsF-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
CarD-like TRCF domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
PPK N-terminal domain-like PHP14-like 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
TGS-like ACT-like 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
Oxygen-evolving enhancer protein 3, Cyclophilin-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Translation proteins PRC-barrel domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Thioredoxin-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Serine metabolism enzymes domain ACT-like 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Formyltransferase FMT C-terminal domain-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Thiolase-like Thiolase-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
DNA clamp DNA clamp 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
TGS-like Class II aaRS and biotin synthetases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
HD-domain/PDEase-like ACT-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Single hybrid motif CoA-dependent acyltransferases 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
FAD/NAD(P)-binding domain PurM N-terminal domain-like 11
PHP14-like Phospholipase D/nuclease 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
Cytochrome f, large domain Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 11
DNA repair protein MutS, domain III SMR domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
HisI-like all-alpha NTP pyrophosphatases 11
Macro domain-like Zn-dependent exopeptidases 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Tricorn protease domain 2 alpha/beta-Hydrolases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Prokaryotic SH3-related domain Cysteine proteinases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
Thioredoxin-like Homodimeric domain of signal transducing histidine kinase 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Zinc beta-ribbon DNA primase core 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Nucleotidyltransferase TGS-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
YrdC/RibB RibA-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Nucleic acid-binding proteins GAD domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
CobE/GbiG C-terminal domain-like Tetrapyrrole methylase 11
Nucleotidyltransferase ACT-like 11
Rudiment single hybrid motif Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
NAD(P)-linked oxidoreductase alpha-helical ferredoxin 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
AF0104/ALDC/Ptd012-like Thioredoxin-like 11
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
CBS-domain pair MgtE membrane domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Translation proteins ThrRS/AlaRS common domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
CbiG N-terminal domain-like Tetrapyrrole methylase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
GIY-YIG endonuclease RuvA domain 2-like 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
PLP-dependent transferases PLP-dependent transferases 11
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
Hsp33 domain HSP33 redox switch-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
RNase III domain-like dsRNA-binding domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Smc hinge domain Tropomyosin 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
TGS-like Class II aaRS ABD-related 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
HD-domain/PDEase-like TGS-like 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 11
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
Translation proteins Translation proteins 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
PIN domain-like DNA/RNA polymerases 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases MOP-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
HAD-like Calcium ATPase, transmembrane domain M 11
PheT/TilS domain Putative DNA-binding domain 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
Carbamate kinase-like ACT-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
PIN domain-like Ribonuclease H-like 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
GroEL-intermediate domain like GroEL apical domain-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
PUA domain-like alpha/beta knot 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
cAMP-binding domain-like "Winged helix" DNA-binding domain 11
YajQ-like YajQ-like 11
"Helical backbone" metal receptor "Helical backbone" metal receptor 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
PreATP-grasp domain PreATP-grasp domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Calcium ATPase, transduction domain A HAD-like 11
E set domains E set domains 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Nucleic acid-binding proteins PheT/TilS domain 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain PurM C-terminal domain-like 11
PDZ domain-like Radical SAM enzymes 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II ACT-like 11
Ribosomal protein L6 Ribosomal protein L6 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Cytochrome f, large domain Rudiment single hybrid motif 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
HMA, heavy metal-associated domain HAD-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
TGS-like ThrRS/AlaRS common domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
PUA domain-like Nucleotidylyl transferase 11
Chelatase Chlorophyll a-b binding protein 11
Nucleic acid-binding proteins RuvA domain 2-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
ISP domain Bet v1-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
LeuD/IlvD-like Aconitase iron-sulfur domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
ACT-like Formyltransferase 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11

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