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Domain combination pairs in Kytococcus sedentarius DSM 20547

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

488 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2416
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 142
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 124
CheY-like C-terminal effector domain of the bipartite response regulators 122
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 105
GroES-like NAD(P)-binding Rossmann-fold domains 102
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 94
Actin-like ATPase domain Actin-like ATPase domain 93
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 84
Calcium ATPase, transduction domain A HAD-like 75
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 75
P-loop containing nucleoside triphosphate hydrolases Translation proteins 75
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 74
HAD-like Calcium ATPase, transmembrane domain M 64
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 64
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 64
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 52
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 54
Thiolase-like Thiolase-like 51
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 54
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 51
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 53
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 52
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 54
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
ClpP/crotonase ClpP/crotonase 41
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 42
PurM N-terminal domain-like PurM C-terminal domain-like 42
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 43
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 41
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 41
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 42
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 32
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Homeodomain-like Ribonuclease H-like 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 31
L30e-like alpha/beta knot 32
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Regulatory protein AraC Homeodomain-like 33
Single hybrid motif CoA-dependent acyltransferases 32
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 32
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 32
Translation proteins EF-G C-terminal domain-like 32
PreATP-grasp domain Rudiment single hybrid motif 32
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
Homeodomain-like Homeodomain-like 33
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
ACT-like ACT-like 21
Sigma2 domain of RNA polymerase sigma factors NTF2-like 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
GroES-like GroES-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Carbamate kinase-like ACT-like 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 22
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 21
Phospholipase D/nuclease Phospholipase D/nuclease 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
TATA-box binding protein-like DNA-glycosylase 22
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
GroEL-intermediate domain like GroEL apical domain-like 21
Acetyl-CoA synthetase-like ACP-like 22
GroEL equatorial domain-like GroEL apical domain-like 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
(Trans)glycosidases Glycosyl hydrolase domain 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 21
ABC transporter transmembrane region ABC transporter transmembrane region 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 22
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
Single hybrid motif Single hybrid motif 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 21
ACP-like Trimeric LpxA-like enzymes 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
"Winged helix" DNA-binding domain GAF domain-like 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
E set domains (Trans)glycosidases 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Nucleic acid-binding proteins RuvA domain 2-like 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 21
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
PLP-binding barrel Alanine racemase C-terminal domain-like 22
DNA methylase specificity domain DNA methylase specificity domain 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 22
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 21
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Acyl-CoA N-acyltransferases (Nat) Succinyl-CoA synthetase domains 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Macro domain-like Zn-dependent exopeptidases 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
MgtE N-terminal domain-like CBS-domain pair 11
Protein kinase-like (PK-like) E set domains 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Globin-like Riboflavin synthase domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Rudiment single hybrid motif Single hybrid motif 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 11
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Cytochrome P450 2Fe-2S ferredoxin-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Trypsin-like serine proteases PDZ domain-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like Chorismate mutase II 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Homeodomain-like DNA-glycosylase 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
lambda repressor-like DNA-binding domains EPT/RTPC-like 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Zinc beta-ribbon DNA primase core 11
PRC-barrel domain MgtE N-terminal domain-like 11
PreATP-grasp domain Single hybrid motif 11
ADC synthase Class I glutamine amidotransferase-like 11
Tropomyosin Multidrug efflux transporter AcrB transmembrane domain 11
MetI-like MetI-like 11
PPK N-terminal domain-like PHP14-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Resolvase-like Homeodomain-like 11
Cupredoxins Cupredoxins 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Thioredoxin-like Thioredoxin-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
PDZ domain-like Ribosomal protein S5 domain 2-like 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
Cytochrome P450 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Acyl-CoA N-acyltransferases (Nat) NTF2-like 11
RuvA domain 2-like BRCT domain 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Chorismate mutase II ACT-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
LmbE-like FMN-binding split barrel 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Ribonuclease H-like HRDC-like 11
Nucleotide-diphospho-sugar transferases Cysteine proteinases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Class II aaRS and biotin synthetases GAD domain-like 11
Tetrapyrrole methylase HemD-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
HMA, heavy metal-associated domain HAD-like 11
Nucleotidyltransferase ACT-like 11
CoA-dependent acyltransferases Thiamin diphosphate-binding fold (THDP-binding) 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
MurD-like peptide ligases, peptide-binding domain TPR-like 11
Putative DNA-binding domain Probable bacterial effector-binding domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Glutathione synthetase ATP-binding domain-like TrkA C-terminal domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Acyl-CoA N-acyltransferases (Nat) NAD(P)-binding Rossmann-fold domains 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Periplasmic binding protein-like II ACT-like 11
Nudix alpha/beta-Hydrolases 11
Protein kinase-like (PK-like) Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Protease propeptides/inhibitors Subtilisin-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
PreATP-grasp domain PreATP-grasp domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Chorismate mutase II Periplasmic binding protein-like II 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Tetrahydrobiopterin biosynthesis enzymes-like 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 11
Translation proteins "Winged helix" DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
"Winged helix" DNA-binding domain NosL/MerB-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Single hybrid motif 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
PLP-dependent transferases PLP-dependent transferases 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
Nucleic acid-binding proteins BRCT domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Ribonuclease H-like GIY-YIG endonuclease 11
NAD(P)-binding Rossmann-fold domains RmlC-like cupins 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Translation proteins ThrRS/AlaRS common domain 11
HD-domain/PDEase-like ACT-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Nucleotidyltransferase TGS-like 11
PGBD-like Cysteine proteinases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Homeodomain-like TATA-box binding protein-like 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
ITPase-like ITPase-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Trimeric LpxA-like enzymes SGNH hydrolase 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
NAD(P)-binding Rossmann-fold domains Periplasmic binding protein-like II 11
Cytochrome P450 Riboflavin synthase domain-like 11
YojJ-like RuvA domain 2-like 11
Ribonuclease H-like NTF2-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleic acid-binding proteins GAD domain-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Ribonuclease H-like DNA/RNA polymerases 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Nucleotide-binding domain Nucleotide-binding domain 11
Protein kinase-like (PK-like) Glycosyl hydrolase domain 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
YajQ-like YajQ-like 11
Nucleotide-diphospho-sugar transferases Acylphosphatase/BLUF domain-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Translation proteins Translation proteins 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
Nudix Dihydrofolate reductase-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
DNA clamp DNA clamp 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
Iron-dependent repressor protein, dimerization domain C-terminal domain of transcriptional repressors 11
HD-domain/PDEase-like TGS-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
alpha/beta-Hydrolases Acetyl-CoA synthetase-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
YjeF N-terminal domain-like Ribokinase-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 11
FabD/lysophospholipase-like Single hybrid motif 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
GAF domain-like CheY-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Periplasmic binding protein-like II GlnB-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Nudix Phosphoglycerate mutase-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
YlxR-like YlxR-like 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PIN domain-like DNA/RNA polymerases 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
PCD-like Bet v1-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Translation proteins PRC-barrel domain 11
E set domains Glycosyl hydrolase domain 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Formyltransferase FMT C-terminal domain-like 11
Metallo-dependent phosphatases Concanavalin A-like lectins/glucanases 11
P-loop containing nucleoside triphosphate hydrolases Dehydroquinate synthase-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Lamin A/C globular tail domain DNase I-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
6-phosphogluconate dehydrogenase C-terminal domain-like Periplasmic binding protein-like II 11
Ribonuclease H-like Ribonuclease H-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
FKBP-like FKBP-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
E set domains E set domains 11
PheT/TilS domain Putative DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
HAD-like Ribosomal protein S5 domain 2-like 11
TGS-like ACT-like 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Protein kinase-like (PK-like) (Trans)glycosidases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PUA domain-like alpha/beta knot 11
Acyl-CoA N-acyltransferases (Nat) SCP-like 11
PGBD-like PGBD-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
PHP14-like Phospholipase D/nuclease 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
RNase III domain-like dsRNA-binding domain-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
CarD-like TRCF domain-like 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
Phosphotyrosine protein phosphatases I Phosphotyrosine protein phosphatases I 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
MurD-like peptide ligases, catalytic domain TPR-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Pseudouridine synthase PUA domain-like 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
HisI-like all-alpha NTP pyrophosphatases 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
YrdC/RibB RibA-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Cytochrome c Cytochrome c 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
PRC-barrel domain CBS-domain pair 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
Activating enzymes of the ubiquitin-like proteins Rhodanese/Cell cycle control phosphatase 11
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
MalF N-terminal region-like MetI-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
PH0987 N-terminal domain-like Cyclophilin-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Class II aaRS and biotin synthetases Translation proteins 11
Galactose mutarotase-like Six-hairpin glycosidases 11
beta-lactamase/transpeptidase-like cAMP-binding domain-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Fic-like "Winged helix" DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains Chorismate mutase II 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Alpha-L RNA-binding motif Pseudouridine synthase 11
Nitrous oxide reductase, N-terminal domain YVTN repeat-like/Quinoprotein amine dehydrogenase 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like Ribonuclease H-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11

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