SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Domain combination pairs in Clostridium perfringens ATCC 13124

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

634 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2413
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 198
Actin-like ATPase domain Actin-like ATPase domain 186
(Trans)glycosidases Galactose-binding domain-like 1313
CheY-like C-terminal effector domain of the bipartite response regulators 121
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 112
Galactose-binding domain-like Fibronectin type III 1010
P-loop containing nucleoside triphosphate hydrolases Translation proteins 107
Galactose-binding domain-like Galactose-binding domain-like 1010
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 104
(Trans)glycosidases Glycosyl hydrolase domain 106
Homeodomain-like Homeodomain-like 94
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 82
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 87
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 81
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 73
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 75
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 71
cAMP-binding domain-like "Winged helix" DNA-binding domain 71
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 76
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 73
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 74
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 72
Rubredoxin-like Ferritin-like 73
HAD-like Calcium ATPase, transmembrane domain M 74
Calcium ATPase, transduction domain A HAD-like 74
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 62
Alpha-L RNA-binding motif Pseudouridine synthase 61
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 62
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 66
Translation proteins EF-G C-terminal domain-like 64
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 55
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 53
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 53
Concanavalin A-like lectins/glucanases Fibronectin type III 55
Cell wall binding repeat Cell wall binding repeat 54
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 55
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 51
beta-N-acetylhexosaminidase-like domain Galactose-binding domain-like 55
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 53
(Trans)glycosidases Galactose mutarotase-like 54
E set domains (Trans)glycosidases 53
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 53
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 53
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 52
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 43
Hyaluronidase post-catalytic domain-like Galactose-binding domain-like 44
Galactose-binding domain-like Carbohydrate-binding domain 44
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 43
(Trans)glycosidases Hyaluronidase post-catalytic domain-like 44
(Trans)glycosidases Fibronectin type III 44
beta-N-acetylhexosaminidase-like domain Hyaluronidase post-catalytic domain-like 44
Fibronectin type III Carbohydrate-binding domain 44
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 44
CheY-like Homeodomain-like 42
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 44
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 41
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 43
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 41
(Trans)glycosidases Carbohydrate-binding domain 44
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
(Trans)glycosidases Type I dockerin domain 44
Galactose-binding domain-like Type I dockerin domain 44
4Fe-4S ferredoxins Fe-only hydrogenase 44
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 41
Nucleic acid-binding proteins RuvA domain 2-like 33
Galactose-binding domain-like Galactose mutarotase-like 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
PurM N-terminal domain-like PurM C-terminal domain-like 32
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 31
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 31
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 32
"Winged helix" DNA-binding domain Chorismate lyase-like 31
Concanavalin A-like lectins/glucanases Sialidases 32
Translation proteins Ribosomal protein S5 domain 2-like 32
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 33
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Triger factor/SurA peptide-binding domain-like FKBP-like 33
FAD/NAD(P)-binding domain HI0933 insert domain-like 31
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
Metallo-hydrolase/oxidoreductase Flavoproteins 32
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 32
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 31
E set domains Glycosyl hydrolase domain 31
PLP-binding barrel Alanine racemase C-terminal domain-like 32
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 31
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Regulatory protein AraC Homeodomain-like 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Phospholipase D/nuclease Phospholipase D/nuclease 31
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 31
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Galactose mutarotase-like Glycosyl hydrolase domain 32
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 33
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 21
"Winged helix" DNA-binding domain TrkA C-terminal domain-like 21
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 21
Trypsin-like serine proteases PDZ domain-like 21
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 21
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
MgtE N-terminal domain-like CBS-domain pair 22
Formyltransferase FMT C-terminal domain-like 21
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 21
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 22
"Winged helix" DNA-binding domain PLP-dependent transferases 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Periplasmic binding protein-like II EAL domain-like 21
beta-N-acetylhexosaminidase-like domain Fibronectin type III 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 21
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 21
Glycoside hydrolase/deacetylase Galactose mutarotase-like 21
"Winged helix" DNA-binding domain HRDC-like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
PK beta-barrel domain-like PK C-terminal domain-like 21
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 21
Clc chloride channel TrkA C-terminal domain-like 21
Periplasmic binding protein-like II MetI-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
(Trans)glycosidases SH3-domain 21
Metallo-dependent phosphatases Metallo-dependent phosphatases 22
TPR-like TPR-like 22
Nucleotide cyclase EAL domain-like 21
HMA, heavy metal-associated domain HAD-like 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
Serine metabolism enzymes domain ACT-like 21
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
L30e-like alpha/beta knot 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
Nucleotide-binding domain Nucleotide-binding domain 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
beta-N-acetylhexosaminidase-like domain Carbohydrate-binding domain 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 21
Translation proteins ThrRS/AlaRS common domain 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 21
Homeodomain-like SIS domain 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
P-loop containing nucleoside triphosphate hydrolases HRDC-like 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
PreATP-grasp domain Rudiment single hybrid motif 21
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 22
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 22
alpha-helical ferredoxin Nucleotide-binding domain 21
PYP-like sensor domain (PAS domain) Nucleotide cyclase 22
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 21
Ribonuclease H-like Nucleic acid-binding proteins 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
MalF N-terminal region-like MetI-like 21
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 22
Concanavalin A-like lectins/glucanases Carbohydrate-binding domain 22
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
(Trans)glycosidases Invasin/intimin cell-adhesion fragments 22
Thiolase-like Thiolase-like 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Nucleotide cyclase HD-domain/PDEase-like 22
(Trans)glycosidases Concanavalin A-like lectins/glucanases 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
"Winged helix" DNA-binding domain Nitrogenase accessory factor-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Double Clp-N motif Double Clp-N motif 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Nucleotide-diphospho-sugar transferases Protein kinase-like (PK-like) 11
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 11
CBS-domain pair DHH phosphoesterases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain Nucleotide-diphospho-sugar transferases 11
SirA-like DsrEFH-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Hypothetical protein YgiW PHP domain-like 11
DnaD domain-like DnaD domain-like 11
TATA-box binding protein-like DNA-glycosylase 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Fibronectin type III Type I dockerin domain 11
Carbohydrate-binding domain Invasin/intimin cell-adhesion fragments 11
Hyaluronidase post-catalytic domain-like Carbohydrate-binding domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
TGS-like ThrRS/AlaRS common domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Tetrahydrobiopterin biosynthesis enzymes-like 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 11
E set domains Starch-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Bacterial adhesins Bacterial adhesins 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
E set domains Invasin/intimin cell-adhesion fragments 11
TGS-like ACT-like 11
Ribonuclease H-like RuvA domain 2-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PTS system fructose IIA component-like PTS IIb component 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
(Trans)glycosidases CalX-like 11
Glycosyl hydrolase domain Invasin/intimin cell-adhesion fragments 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
TPR-like Nucleotide cyclase 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Type I dockerin domain Invasin/intimin cell-adhesion fragments 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
TGS-like Class II aaRS and biotin synthetases 11
Nucleic acid-binding proteins PheT/TilS domain 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
CalX-like Type I dockerin domain 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Trigger factor ribosome-binding domain FKBP-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
DeoB insert domain-like Alkaline phosphatase-like 11
N-acetylmuramoyl-L-alanine amidase-like SH3-domain 11
Chaperone J-domain TPR-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
ThrRS/AlaRS common domain P-loop containing nucleoside triphosphate hydrolases 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
CcmK-like CcmK-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Galactose-binding domain-like Sialidases 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Collagen-binding domain Collagen-binding domain 11
PspA lactotransferrin-binding region Duplicated hybrid motif 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
2Fe-2S ferredoxin-like Fe-only hydrogenase 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Chondroitin AC/alginate lyase Hyaluronate lyase-like, C-terminal domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
DNA methylase specificity domain DNA methylase specificity domain 11
beta-N-acetylhexosaminidase-like domain Concanavalin A-like lectins/glucanases 11
SacY-like RNA-binding domain PTS-regulatory domain, PRD 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Metallo-hydrolase/oxidoreductase Rubredoxin-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 11
Nucleic acid-binding proteins GAD domain-like 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
AbrB/MazE/MraZ-like GAF domain-like 11
PA domain Subtilisin-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Nucleotide cyclase PHP domain-like 11
Galactose mutarotase-like Hyaluronate lyase-like, C-terminal domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
GroES-like NAD(P)-binding Rossmann-fold domains 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
E set domains E set domains 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Fe-only hydrogenase Rubredoxin-like 11
Metallo-hydrolase/oxidoreductase FAD/NAD(P)-binding domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Sec-C motif Creatinase/aminopeptidase 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
RmlC-like cupins (Trans)glycosidases 11
Glutamine synthetase/guanido kinase Glutathione synthetase ATP-binding domain-like 11
4Fe-4S ferredoxins Radical SAM enzymes 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
RNase III domain-like dsRNA-binding domain-like 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
YjeF N-terminal domain-like Ribokinase-like 11
DNA clamp DNA clamp 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
"Winged helix" DNA-binding domain CBS-domain pair 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
HprK N-terminal domain-like DHH phosphoesterases 11
PUA domain-like alpha/beta knot 11
vWA-like Cna protein B-type domain 11
Cell wall binding repeat Zn-dependent exopeptidases 11
Concanavalin A-like lectins/glucanases Ricin B-like lectins 11
Glycosyl hydrolase domain Galactose-binding domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
PIN domain-like Ribonuclease H-like 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
SGNH hydrolase SGNH hydrolase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Sialidases Carbohydrate-binding domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Galactose-binding domain-like L domain-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
PYP-like sensor domain (PAS domain) PHP domain-like 11
Homeodomain-like (Trans)glycosidases 11
PRTase-like PRTase-like 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Glycosyl hydrolase domain Fibronectin type III 11
SH3-domain SH3-domain 11
L9 N-domain-like Ribonuclease H-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Thioredoxin-like Thioredoxin-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Nucleic acid-binding proteins HD-domain/PDEase-like 11
Rubredoxin-like FAD/NAD(P)-binding domain 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Chondroitin AC/alginate lyase Galactose mutarotase-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Zinc beta-ribbon Zinc beta-ribbon 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Starch-binding domain-like Invasin/intimin cell-adhesion fragments 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 11
Six-hairpin glycosidases Concanavalin A-like lectins/glucanases 11
"Winged helix" DNA-binding domain PRTase-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
PDZ domain-like ClpP/crotonase 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
Galactose-binding domain-like Invasin/intimin cell-adhesion fragments 11
Nucleic acid-binding proteins BRCT domain 11
Flavoproteins FAD/NAD(P)-binding domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Hyaluronidase post-catalytic domain-like Fibronectin type III 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
RuvA domain 2-like BRCT domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Class II aaRS and biotin synthetases GAD domain-like 11
DAK1/DegV-like DhaL-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Ribonuclease H-like BRCT domain 11
Flavoproteins 4Fe-4S ferredoxins 11
HD-domain/PDEase-like Nucleotidyltransferase 11
SGNH hydrolase alpha/beta-Hydrolases 11
Glycosyl hydrolase domain Type I dockerin domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Hyaluronidase post-catalytic domain-like Type I dockerin domain 11
Putative DNA-binding domain Probable bacterial effector-binding domain 11
PDZ domain-like Radical SAM enzymes 11
4Fe-4S ferredoxins DHS-like NAD/FAD-binding domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Starch-binding domain-like Starch-binding domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Phospholipase C/P1 nuclease Lipase/lipooxygenase domain (PLAT/LH2 domain) 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
PKD domain Fibronectin type III 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
4Fe-4S ferredoxins Rubredoxin-like 11
lambda repressor-like DNA-binding domains TPR-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
MesJ substrate recognition domain-like PheT/TilS domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
RmlC-like cupins Glycosyl hydrolase domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
HprK N-terminal domain-like CBS-domain pair 11
HPr-like P-loop containing nucleoside triphosphate hydrolases 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
Cytochrome b5-like heme/steroid binding domain Cytochrome b5-like heme/steroid binding domain 11
ALDH-like Dehydroquinate synthase-like 11
Phoshotransferase/anion transport protein PTS system IIB component-like 11
Sialidases Fibronectin type III 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
Nucleotidyltransferase ACT-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nucleotidyltransferase TGS-like 11
DNA repair protein MutS, domain III SMR domain-like 11
Galactose mutarotase-like Type I dockerin domain 11
MetI-like MetI-like 11
beta-N-acetylhexosaminidase-like domain Type I dockerin domain 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Fibronectin type III Fibronectin type III 11
(Trans)glycosidases (Trans)glycosidases 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
Galactose mutarotase-like Invasin/intimin cell-adhesion fragments 11
Type I dockerin domain Carbohydrate-binding domain 11
Acyl-CoA N-acyltransferases (Nat) Class I glutamine amidotransferase-like 11
CBS-domain pair MgtE membrane domain-like 11
Six-hairpin glycosidases Galactose-binding domain-like 11
Translation proteins PRC-barrel domain 11
Cna protein B-type domain Cna protein B-type domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Restriction endonuclease-like Restriction endonuclease-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Sigma2 domain of RNA polymerase sigma factors C-terminal effector domain of the bipartite response regulators 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Tetrapyrrole methylase HemD-like 11
Calcium-dependent phosphotriesterase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Calcium-dependent phosphotriesterase Homodimeric domain of signal transducing histidine kinase 11
Galactose mutarotase-like Carbohydrate-binding domain 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Macro domain-like Zn-dependent exopeptidases 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Homeodomain-like Glycosyl hydrolase domain 11
HD-domain/PDEase-like TGS-like 11
4Fe-4S ferredoxins Adenine nucleotide alpha hydrolases-like 11
Fibronectin type III Invasin/intimin cell-adhesion fragments 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
PKD domain Collagen-binding domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Six-hairpin glycosidases Fibronectin type III 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
FAD/NAD(P)-binding domain ISP domain 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
PRC-barrel domain PRC-barrel domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Bacillus cereus metalloprotein-like Bacillus cereus metalloprotein-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Protein kinase-like (PK-like) Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Flavoproteins Rubredoxin-like 11
Hsp33 domain HSP33 redox switch-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Metallo-hydrolase/oxidoreductase Cell wall binding repeat 11
CarD-like TRCF domain-like 11
4Fe-4S ferredoxins Ferritin-like 11
Carbamate kinase-like ACT-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Galactose-binding domain-like CalX-like 11
GyrA/ParC C-terminal domain-like GyrA/ParC C-terminal domain-like 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
HPr-like PYP-like sensor domain (PAS domain) 11
Translation proteins Translation proteins 11
Lysozyme-like Duplicated hybrid motif 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Beta-D-glucan exohydrolase, C-terminal domain Carbohydrate-binding domain 11
PheT/TilS domain Putative DNA-binding domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
GroEL-intermediate domain like GroEL apical domain-like 11
Fe-only hydrogenase Ferritin-like 11
TGS-like Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
PreATP-grasp domain PreATP-grasp domain 11
Tex N-terminal region-like RuvA domain 2-like 11
CBS-domain pair ACT-like 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 11
HD-domain/PDEase-like ACT-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
PKD domain Galactose-binding domain-like 11
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
PIN domain-like DNA/RNA polymerases 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
HPr-like Homeodomain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
Sensory domain-like Sporulation response regulatory protein Spo0B 11
YrdC/RibB RibA-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Glycosyl hydrolase domain Carbohydrate-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Rubredoxin-like Rubredoxin-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Zinc beta-ribbon DNA primase core 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
"Winged helix" DNA-binding domain GAF domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Translation proteins "Winged helix" DNA-binding domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Swiveling domain of dehydratase reactivase alpha subunit Actin-like ATPase domain 11
RuvA domain 2-like RuvA domain 2-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
NEAT domain-like NEAT domain-like 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Galactose mutarotase-like Fibronectin type III 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
beta-Galactosidase/glucuronidase domain Type I dockerin domain 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
RmlC-like cupins Homeodomain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Cation efflux protein cytoplasmic domain-like Cation efflux protein cytoplasmic domain-like 11
PYP-like sensor domain (PAS domain) HD-domain/PDEase-like 11
SH3-domain Cysteine proteinases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Starch-binding domain-like (Trans)glycosidases 11
Homing endonucleases Homing endonucleases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]