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Domain combination pairs in Brachybacterium faecium DSM 4810

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

539 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3613
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 355
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 293
GroES-like NAD(P)-binding Rossmann-fold domains 172
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 176
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 173
Actin-like ATPase domain Actin-like ATPase domain 165
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 153
CheY-like C-terminal effector domain of the bipartite response regulators 152
"Winged helix" DNA-binding domain Actin-like ATPase domain 124
(Trans)glycosidases Glycosyl hydrolase domain 116
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 116
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 101
MalF N-terminal region-like MetI-like 82
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 84
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 84
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 73
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 62
"Winged helix" DNA-binding domain GAF domain-like 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 62
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 63
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 64
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 53
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 54
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 54
E set domains (Trans)glycosidases 54
(Trans)glycosidases Galactose-binding domain-like 55
P-loop containing nucleoside triphosphate hydrolases Translation proteins 55
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 53
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 51
Thiolase-like Thiolase-like 51
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 41
L30e-like alpha/beta knot 42
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 43
Folate-binding domain Aminomethyltransferase beta-barrel domain 43
PurM N-terminal domain-like PurM C-terminal domain-like 42
HAD-like Calcium ATPase, transmembrane domain M 43
Calcium ATPase, transduction domain A HAD-like 43
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 43
PreATP-grasp domain Rudiment single hybrid motif 42
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 41
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 42
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 43
E set domains Glycosyl hydrolase domain 43
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 41
Enolase N-terminal domain-like Enolase C-terminal domain-like 41
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 33
Single hybrid motif CoA-dependent acyltransferases 32
Alpha-L RNA-binding motif Pseudouridine synthase 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 33
Concanavalin A-like lectins/glucanases Arabinanase/levansucrase/invertase 32
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 32
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 31
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 32
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 33
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 33
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 31
Regulatory protein AraC Homeodomain-like 33
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 31
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 32
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 32
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
ACT-like ACT-like 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 33
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 32
NAD(P)-binding Rossmann-fold domains ACT-like 33
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 31
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 31
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 32
MetI-like P-loop containing nucleoside triphosphate hydrolases 31
E set domains E set domains 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 22
MetI-like MetI-like 21
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
Nudix "Winged helix" DNA-binding domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
GroEL-intermediate domain like GroEL apical domain-like 21
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
P-loop containing nucleoside triphosphate hydrolases HRDC-like 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Glutathione synthetase ATP-binding domain-like Single hybrid motif 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
PLP-binding barrel Alanine racemase C-terminal domain-like 22
MgtE N-terminal domain-like CBS-domain pair 22
RmlC-like cupins Homeodomain-like 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
MFS general substrate transporter MFS general substrate transporter 22
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 22
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 21
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 22
NAD(P)-binding Rossmann-fold domains Bet v1-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
PTS system IIB component-like Phoshotransferase/anion transport protein 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 22
Nucleic acid-binding proteins RuvA domain 2-like 22
ClpP/crotonase ClpP/crotonase 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
GroEL equatorial domain-like GroEL apical domain-like 21
lambda repressor-like DNA-binding domains RmlC-like cupins 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 22
Homeodomain-like Homeodomain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
"Winged helix" DNA-binding domain Chorismate lyase-like 21
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 22
Aconitase iron-sulfur domain LeuD/IlvD-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Translation proteins EF-G C-terminal domain-like 22
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
PreATP-grasp domain Single hybrid motif 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
PGBD-like Cysteine proteinases 22
Iron-dependent repressor protein, dimerization domain C-terminal domain of transcriptional repressors 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Galactose mutarotase-like (Trans)glycosidases 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
DAK1/DegV-like DhaL-like 21
(Trans)glycosidases Class I glutamine amidotransferase-like 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 21
Nucleotidylyl transferase Alpha-L RNA-binding motif 21
Rudiment single hybrid motif Single hybrid motif 21
HCP-like TPR-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Ribonuclease H-like Six-hairpin glycosidases 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Metallo-dependent phosphatases Quinoprotein alcohol dehydrogenase-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Thioredoxin-like NHL repeat 11
NAD(P)-binding Rossmann-fold domains Metallo-hydrolase/oxidoreductase 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
HMA, heavy metal-associated domain HAD-like 11
Acyl-CoA N-acyltransferases (Nat) SCP-like 11
HAD-like HAD-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Xylose isomerase-like Sialidases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Nucleotide-binding domain Nucleotide-binding domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
RmlC-like cupins NAD(P)-binding Rossmann-fold domains 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Homeodomain-like NagB/RpiA/CoA transferase-like 11
TGS-like ACT-like 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Nucleotidyltransferase Nucleotidyltransferase 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Cytochrome c Cytochrome c 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Ribokinase-like Heme oxygenase-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Ribonuclease H-like HRDC-like 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Galactose-binding domain-like Galactose mutarotase-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
E set domains alpha/beta-Hydrolases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Actin-crosslinking proteins Beta-D-glucan exohydrolase, C-terminal domain 11
Thioredoxin-like TPR-like 11
PKD domain PKD domain 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
RNase III domain-like dsRNA-binding domain-like 11
Periplasmic binding protein-like II GlnB-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
YrdC/RibB RibA-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Single hybrid motif Single hybrid motif 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like I 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Quinoprotein alcohol dehydrogenase-like PKD domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
DPP6 N-terminal domain-like PDZ domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) CofE-like 11
P-loop containing nucleoside triphosphate hydrolases Riboflavin synthase domain-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Tetrahydrobiopterin biosynthesis enzymes-like 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Globin-like Riboflavin synthase domain-like 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
Galactose mutarotase-like Six-hairpin glycosidases 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Fibronectin type III Fibronectin type III 11
TATA-box binding protein-like DNA-glycosylase 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
CarD-like TRCF domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
UROD/MetE-like UROD/MetE-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 11
Class II aaRS and biotin synthetases Translation proteins 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
Tetrapyrrole methylase Chelatase 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Tricorn protease N-terminal domain PDZ domain-like 11
Activating enzymes of the ubiquitin-like proteins Rhodanese/Cell cycle control phosphatase 11
RuvA domain 2-like BRCT domain 11
HCP-like UDP-Glycosyltransferase/glycogen phosphorylase 11
PreATP-grasp domain Methylglyoxal synthase-like 11
AhpD-like AhpD-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Putative DNA-binding domain PP2C-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
Galactose-binding domain-like Galactose-binding domain-like 11
HD-domain/PDEase-like ACT-like 11
Nucleotidyltransferase TGS-like 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Homeodomain-like TATA-box binding protein-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Concanavalin A-like lectins/glucanases (Trans)glycosidases 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 11
Nucleotide-diphospho-sugar transferases Histidine-containing phosphotransfer domain, HPT domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
alpha/beta-Hydrolases Acetyl-CoA synthetase-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Acyl-CoA N-acyltransferases (Nat) Succinyl-CoA synthetase domains 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Tricorn protease N-terminal domain ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
GroES-like GroES-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Serine metabolism enzymes domain ACT-like 11
ACT-like Formyltransferase 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
DPP6 N-terminal domain-like ClpP/crotonase 11
NAD(P)-binding Rossmann-fold domains GAF domain-like 11
Aldolase post-HMGL domain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
PUA domain-like alpha/beta knot 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Concanavalin A-like lectins/glucanases PKD domain 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Nudix Phosphoglycerate mutase-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
(Trans)glycosidases Actin-crosslinking proteins 11
Acyl-CoA N-acyltransferases (Nat) NAD(P)-binding Rossmann-fold domains 11
PDZ domain-like Ribosomal protein S5 domain 2-like 11
HD-domain/PDEase-like TGS-like 11
Homeodomain-like Ribonuclease H-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
PGBD-like PGBD-like 11
GroES-like Metallo-hydrolase/oxidoreductase 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotide-diphospho-sugar transferases Carbon-nitrogen hydrolase 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
Homeodomain-like DNA-glycosylase 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Phosphoglucomutase, C-terminal domain Trm112p-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Translation proteins Translation proteins 11
DNA clamp DNA clamp 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
PLP-dependent transferases PLP-dependent transferases 11
PIN domain-like DNA/RNA polymerases 11
Phosphoglucomutase, first 3 domains Trm112p-like 11
Cyclophilin-like Cyclophilin-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Translation proteins PRC-barrel domain 11
Protein kinase-like (PK-like) S-adenosyl-L-methionine-dependent methyltransferases 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Carbamate kinase-like PUA domain-like 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain DNA ligase/mRNA capping enzyme, catalytic domain 11
L-aspartase-like Ribokinase-like 11
Nucleic acid-binding proteins GAD domain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Adenine nucleotide alpha hydrolases-like CofE-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-linked oxidoreductase 11
NAD(P)-binding Rossmann-fold domains HAD-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PreATP-grasp domain PreATP-grasp domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
FAD-linked oxidoreductase ALDH-like 11
Formyltransferase FMT C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Acyl-CoA N-acyltransferases (Nat) Glutathione synthetase ATP-binding domain-like 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Translation proteins ThrRS/AlaRS common domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
P-loop containing nucleoside triphosphate hydrolases Nudix 11
RuvA domain 2-like RuvA domain 2-like 11
Ribosomal protein L6 Ribosomal protein L6 11
FAD-linked reductases, C-terminal domain Folate-binding domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
LmbE-like CBD9-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Quinoprotein alcohol dehydrogenase-like Concanavalin A-like lectins/glucanases 11
PIN domain-like Ribonuclease H-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Nucleic acid-binding proteins BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
CBS-domain pair MgtE membrane domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Zinc beta-ribbon DNA primase core 11
Carbamate kinase-like ACT-like 11
PA domain Subtilisin-like 11
PDZ domain-like ClpP/crotonase 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Fic-like "Winged helix" DNA-binding domain 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
YajQ-like YajQ-like 11
Tricorn protease N-terminal domain alpha/beta-Hydrolases 11
Periplasmic binding protein-like II ACT-like 11
Ribonuclease H-like NTF2-like 11
FAD/NAD(P)-binding domain Folate-binding domain 11
Nucleotidyltransferase ACT-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Trypsin-like serine proteases PDZ domain-like 11
Translation proteins "Winged helix" DNA-binding domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Adhesin YadA, collagen-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
CoA-dependent acyltransferases Thiamin diphosphate-binding fold (THDP-binding) 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Ribonuclease H-like GIY-YIG endonuclease 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
lambda repressor-like DNA-binding domains EPT/RTPC-like 11
Pseudouridine synthase PUA domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain NAD(P)-linked oxidoreductase 11
Cupredoxins Cupredoxins 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11

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