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Domain combination pairs in Lactobacillus brevis ATCC 367

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

385 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2311
Actin-like ATPase domain Actin-like ATPase domain 207
GroES-like NAD(P)-binding Rossmann-fold domains 101
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 91
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 84
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 82
Calcium ATPase, transduction domain A HAD-like 84
HAD-like Calcium ATPase, transmembrane domain M 84
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 74
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 71
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 71
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 72
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
(Trans)glycosidases Glycosyl hydrolase domain 63
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 61
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 62
CheY-like C-terminal effector domain of the bipartite response regulators 61
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 61
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 53
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
Translation proteins EF-G C-terminal domain-like 54
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
"Winged helix" DNA-binding domain Chorismate lyase-like 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 42
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 42
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 43
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 42
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 42
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 43
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Bacterial adhesins Bacterial adhesins 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
lambda repressor-like DNA-binding domains TPR-like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
"Winged helix" DNA-binding domain Actin-like ATPase domain 32
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 33
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Thiolase-like Thiolase-like 31
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 33
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 31
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Regulatory protein AraC Homeodomain-like 21
Nucleic acid-binding proteins Ribonuclease H-like 22
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 22
Class II aaRS and biotin synthetases SufE/NifU 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 22
Galactose-binding domain-like (Trans)glycosidases 21
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 21
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
Nucleotidylyl transferase Alpha-L RNA-binding motif 21
CoA-dependent acyltransferases CoA-dependent acyltransferases 21
RmlC-like cupins Homeodomain-like 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
"Winged helix" DNA-binding domain GAF domain-like 21
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 21
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 22
MetI-like Periplasmic binding protein-like II 22
Galactose mutarotase-like Six-hairpin glycosidases 22
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Galactose mutarotase-like (Trans)glycosidases 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
L30e-like alpha/beta knot 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
FKBP-like Triger factor/SurA peptide-binding domain-like 22
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 22
Homeodomain-like SIS domain 21
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 21
Translation proteins Ribosomal protein S5 domain 2-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Homeodomain-like Homeodomain-like 22
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Galactose mutarotase-like Glycosyl hydrolase domain 22
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Bacterial adhesins Cna protein B-type domain 22
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 21
TrpR-like TrpR-like 11
Zinc beta-ribbon DNA primase core 11
"Winged helix" DNA-binding domain PRTase-like 11
Nucleic acid-binding proteins BRCT domain 11
Galactose mutarotase-like Putative glucosidase YicI, C-terminal domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
DNA repair protein MutS, domain III SMR domain-like 11
(Trans)glycosidases Putative glucosidase YicI, C-terminal domain 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
HprK N-terminal domain-like PEP carboxykinase-like 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
YrdC/RibB RibA-like 11
PIN domain-like Ribonuclease H-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain Galactose-binding domain-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like I 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
LysM domain Cysteine proteinases 11
RuvA domain 2-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
P-loop containing nucleoside triphosphate hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Glycosyl hydrolase domain Putative glucosidase YicI, C-terminal domain 11
"Winged helix" DNA-binding domain HRDC-like 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Tex N-terminal region-like Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
CcmK-like CcmK-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
HD-domain/PDEase-like ACT-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
L9 N-domain-like Ribonuclease H-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
PGBD-like Cysteine proteinases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
PK beta-barrel domain-like PK C-terminal domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Translation proteins Translation proteins 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Ribonuclease H-like DNA/RNA polymerases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
RuvA domain 2-like BRCT domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PreATP-grasp domain Rudiment single hybrid motif 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Class II aaRS and biotin synthetases Translation proteins 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Cna protein B-type domain Cna protein B-type domain 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Prokaryotic SH3-related domain beta-lactamase/transpeptidase-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
RNase III domain-like dsRNA-binding domain-like 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
PPK N-terminal domain-like PHP14-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Homeodomain-like NagB/RpiA/CoA transferase-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
PUA domain-like alpha/beta knot 11
Single hybrid motif CoA-dependent acyltransferases 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Swiveling domain of dehydratase reactivase alpha subunit Actin-like ATPase domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
TrpR-like Ribonuclease H-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
GroEL equatorial domain-like GroEL apical domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Nucleotidyltransferase TGS-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Translation proteins PRC-barrel domain 11
Formyltransferase FMT C-terminal domain-like 11
DNA clamp DNA clamp 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
CarD-like TRCF domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
DeoB insert domain-like Alkaline phosphatase-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
MFS general substrate transporter MFS general substrate transporter 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Clc chloride channel TrkA C-terminal domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Smc hinge domain Tropomyosin 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
NEAT domain-like NEAT domain-like 11
Cupredoxins Cupredoxins 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
DNA-glycosylase Nudix 11
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
HD-domain/PDEase-like Nucleotidyltransferase 11
LysM domain LysM domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PreATP-grasp domain PreATP-grasp domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Cystatin/monellin Cystatin/monellin 11
ALDH-like Dehydroquinate synthase-like 11
TGS-like ThrRS/AlaRS common domain 11
PheT/TilS domain Putative DNA-binding domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Trypsin-like serine proteases PDZ domain-like 11
Protease propeptides/inhibitors Subtilisin-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
GIY-YIG endonuclease RuvA domain 2-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
L,D-transpeptidase pre-catalytic domain-like L,D-transpeptidase catalytic domain-like 11
TPR-like TPR-like 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
Ribonuclease H-like RuvA domain 2-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
TGS-like Class II aaRS and biotin synthetases 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
TGS-like Class II aaRS ABD-related 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Zinc beta-ribbon N-terminal domain of DnaB helicase 11
X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain alpha/beta-Hydrolases 11
Translation proteins ThrRS/AlaRS common domain 11
HD-domain/PDEase-like TGS-like 11
Protein kinase-like (PK-like) LanC-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
DNA primase core N-terminal domain of DnaB helicase 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
Resolvase-like Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
PHP14-like Phospholipase D/nuclease 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Tex N-terminal region-like RuvA domain 2-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Sensory domain-like Sporulation response regulatory protein Spo0B 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Nucleotidyltransferase ACT-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
TGS-like ACT-like 11
Nucleic acid-binding proteins GAD domain-like 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Hsp33 domain HSP33 redox switch-like 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11

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