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Domain combination pairs in Thermoanaerobacter pseudethanolicus ATCC 33223

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

590 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Actin-like ATPase domain Actin-like ATPase domain 195
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 1711
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 102
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 102
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 91
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 92
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 92
Homeodomain-like Ribonuclease H-like 81
P-loop containing nucleoside triphosphate hydrolases Translation proteins 74
CheY-like C-terminal effector domain of the bipartite response regulators 71
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 75
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 73
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 71
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 76
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 51
Calcium ATPase, transduction domain A HAD-like 54
(Trans)glycosidases Glycosyl hydrolase domain 55
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 54
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 53
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 54
"Winged helix" DNA-binding domain Actin-like ATPase domain 52
HAD-like Calcium ATPase, transmembrane domain M 54
Translation proteins EF-G C-terminal domain-like 42
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
PTS-regulatory domain, PRD PTS system IIB component-like 43
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 43
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 42
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 42
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 41
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 43
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 43
"Winged helix" DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 44
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 43
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 43
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 32
RuvA domain 2-like Nucleic acid-binding proteins 33
lambda repressor-like DNA-binding domains TPR-like 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
E set domains (Trans)glycosidases 33
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 32
PTS system IIB component-like Phoshotransferase/anion transport protein 32
Phosphoenolpyruvate/pyruvate domain Phosphohistidine domain 33
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 32
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 33
GroES-like NAD(P)-binding Rossmann-fold domains 31
P-loop containing nucleoside triphosphate hydrolases PTS-regulatory domain, PRD 33
"Winged helix" DNA-binding domain PTS system IIB component-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Galactose mutarotase-like Six-hairpin glycosidases 32
PTS-regulatory domain, PRD PTS system fructose IIA component-like 33
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 31
P-loop containing nucleoside triphosphate hydrolases PTS system fructose IIA component-like 33
E set domains Glycosyl hydrolase domain 33
MalF N-terminal region-like MetI-like 32
Trypsin-like serine proteases PDZ domain-like 32
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
4Fe-4S ferredoxins Fe-only hydrogenase 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
LysM domain LysM domain 33
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 32
PurM N-terminal domain-like PurM C-terminal domain-like 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 22
CheC-like Surface presentation of antigens (SPOA) 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
FKBP-like Triger factor/SurA peptide-binding domain-like 22
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 22
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
HMA, heavy metal-associated domain HAD-like 22
GAF domain-like PYP-like sensor domain (PAS domain) 22
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
LysM domain PGBD-like 22
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
"Winged helix" DNA-binding domain Chorismate lyase-like 21
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
"Winged helix" DNA-binding domain PTS system fructose IIA component-like 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
alpha-helical ferredoxin Nucleotide-binding domain 22
L30e-like alpha/beta knot 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 21
TK C-terminal domain-like 4Fe-4S ferredoxins 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
"Winged helix" DNA-binding domain GAF domain-like 21
TGS-like ThrRS/AlaRS common domain 22
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 21
PreATP-grasp domain Rudiment single hybrid motif 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 22
Galactose-binding domain-like (Trans)glycosidases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
TPR-like TPR-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
E set domains Starch-binding domain-like 22
Thioredoxin-like Thioredoxin-like 21
(Trans)glycosidases Starch-binding domain-like 22
HprK N-terminal domain-like CBS-domain pair 22
Glycosyl hydrolase domain Starch-binding domain-like 22
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 22
PYP-like sensor domain (PAS domain) Homeodomain-like 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
HAMP domain-like PYP-like sensor domain (PAS domain) 22
PLP-binding barrel Alanine racemase C-terminal domain-like 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
TGS-like P-loop containing nucleoside triphosphate hydrolases 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 21
MoeA N-terminal region -like MoeA C-terminal domain-like 22
Quinoprotein alcohol dehydrogenase-like PGBD-like 21
Serine metabolism enzymes domain ACT-like 22
Ribonuclease H-like Nucleic acid-binding proteins 22
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 21
Translation proteins Ribosomal protein S5 domain 2-like 21
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 22
ACT-like ACT-like 22
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PreATP-grasp domain PreATP-grasp domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
"Winged helix" DNA-binding domain Putative transcriptional regulator TM1602, C-terminal domain 11
RuvA domain 2-like JAB1/MPN domain 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins PRC-barrel domain 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
beta-Galactosidase/glucuronidase domain Invasin/intimin cell-adhesion fragments 11
Nucleic acid-binding proteins AF1531-like 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
(Trans)glycosidases Invasin/intimin cell-adhesion fragments 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Phoshotransferase/anion transport protein 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
GAF domain-like Homeodomain-like 11
Thioredoxin-like 4Fe-4S ferredoxins 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
TATA-box binding protein-like DNA-glycosylase 11
PA domain Subtilisin-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
SH3-domain Cysteine proteinases 11
Nucleic acid-binding proteins BRCT domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Inosine monophosphate dehydrogenase (IMPDH) Inosine monophosphate dehydrogenase (IMPDH) 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Thioredoxin-like Nqo1C-terminal domain-like 11
"Winged helix" DNA-binding domain PRTase-like 11
Pseudouridine synthase PUA domain-like 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
GAF domain-like HD-domain/PDEase-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
"Winged helix" DNA-binding domain Ribokinase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
PTS system fructose IIA component-like Phoshotransferase/anion transport protein 11
Zinc beta-ribbon N-terminal domain of DnaB helicase 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Ribonuclease H-like RuvA domain 2-like 11
Thioredoxin-like Nqo1 middle domain-like 11
Formiminotransferase domain of formiminotransferase-cyclodeaminase. Formiminotransferase domain of formiminotransferase-cyclodeaminase. 11
Tex N-terminal region-like RuvA domain 2-like 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 11
PheT/TilS domain Putative DNA-binding domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
GAF domain-like Nucleotide cyclase 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Nqo1 middle domain-like 4Fe-4S ferredoxins 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
DeoB insert domain-like Alkaline phosphatase-like 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
PYP-like sensor domain (PAS domain) HD-domain/PDEase-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Nucleotidyltransferase PHP domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
CBS-domain pair DHH phosphoesterases 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Ferritin-like Rubredoxin-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 11
Sensory domain-like HAMP domain-like 11
CBS-domain pair MgtE membrane domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Class II aaRS and biotin synthetases Translation proteins 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Nucleotidyltransferase ACT-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Formyltransferase FMT C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
PIN domain-like Ribonuclease H-like 11
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
PH0987 N-terminal domain-like Cyclophilin-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Zinc beta-ribbon DNA primase core 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Methionine synthase activation domain-like 2Fe-2S ferredoxin-like 11
Duplicated hybrid motif Lysozyme-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
RmlC-like cupins Homeodomain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Class II aaRS and biotin synthetases SufE/NifU 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Nucleic acid-binding proteins GAD domain-like 11
SacY-like RNA-binding domain PTS-regulatory domain, PRD 11
Tetrapyrrole methylase HemD-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
PYP-like sensor domain (PAS domain) Nucleotide cyclase 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
CBS-domain pair Thioesterase/thiol ester dehydrase-isomerase 11
Six-hairpin glycosidases Six-hairpin glycosidases 11
MFS general substrate transporter "Winged helix" DNA-binding domain 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
ThrRS/AlaRS common domain P-loop containing nucleoside triphosphate hydrolases 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
ClpP/crotonase ClpP/crotonase 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
RuvA domain 2-like RuvA domain 2-like 11
Tricorn protease N-terminal domain alpha/beta-Hydrolases 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Thymidylate synthase-complementing protein Thy1 Thymidylate synthase-complementing protein Thy1 11
Calcium ATPase, transmembrane domain M Metallo-hydrolase/oxidoreductase 11
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 11
Tex N-terminal region-like Ribonuclease H-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like Fe-only hydrogenase 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
YrdC/RibB RibA-like 11
alpha-helical ferredoxin ARM repeat 11
PGBD-like beta-lactamase/transpeptidase-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
GroEL equatorial domain-like GroEL apical domain-like 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
LysM domain beta-lactamase/transpeptidase-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
HIT-like HIT-like 11
HprK N-terminal domain-like DHH phosphoesterases 11
Hsp33 domain HSP33 redox switch-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
RNase III domain-like dsRNA-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Homeodomain-like SIS domain 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Translation proteins ThrRS/AlaRS common domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
HD-domain/PDEase-like ACT-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
TGS-like ACT-like 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
PK C-terminal domain-like Phosphohistidine domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases MOP-like 11
Rubredoxin-like Superoxide reductase-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Fe-only hydrogenase PYP-like sensor domain (PAS domain) 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Ribonuclease H-like AF1531-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
"Winged helix" DNA-binding domain CBS-domain pair 11
4Fe-4S ferredoxins PYP-like sensor domain (PAS domain) 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Myosin rod fragments MgtE N-terminal domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PrpR receptor domain-like Homeodomain-like 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Metallo-dependent phosphatases Metallo-dependent phosphatases 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
GIY-YIG endonuclease RuvA domain 2-like 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 11
Fibronectin type III Starch-binding domain-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
CheY-like Nucleotide cyclase 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
FliG FliG 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PrpR receptor domain-like PYP-like sensor domain (PAS domain) 11
HAMP domain-like HD-domain/PDEase-like 11
ALDH-like Dehydroquinate synthase-like 11
Fibronectin type III Fibronectin type III 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Subtilisin-like Invasin/intimin cell-adhesion fragments 11
PK beta-barrel domain-like Phosphohistidine domain 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Galactose-binding domain-like Invasin/intimin cell-adhesion fragments 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Transposase IS200-like lambda repressor-like DNA-binding domains 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ribbon-helix-helix ACT-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Single hybrid motif CoA-dependent acyltransferases 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
MFS general substrate transporter P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
PHP domain-like RuvA domain 2-like 11
Carbamate kinase-like PUA domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
PA domain Invasin/intimin cell-adhesion fragments 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Glycosyl hydrolase domain Fibronectin type III 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Ribonuclease H-like DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
PIN domain-like DNA/RNA polymerases 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
HprK N-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
ClpP/crotonase NfeD domain-like 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
HD-domain/PDEase-like TGS-like 11
TGS-like Class II aaRS ABD-related 11
DNA repair protein MutS, domain III SMR domain-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
(Trans)glycosidases Fibronectin type III 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
NAD(P)-binding Rossmann-fold domains PLP-dependent transferases 11
Class II aaRS and biotin synthetases GAD domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Periplasmic binding protein-like II ACT-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Thiolase-like Thiolase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
MgtE N-terminal domain-like CBS-domain pair 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
E set domains Fibronectin type III 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Ribosomal protein L6 Ribosomal protein L6 11
Nucleotidyltransferase TGS-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
DnaD domain-like DnaD domain-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
CPE0013-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
CheY-binding domain of CheA CheW-like 11
HisI-like all-alpha NTP pyrophosphatases 11
Methionine synthase activation domain-like Actin-like ATPase domain 11
Aldolase post-HMGL domain-like 11
Siroheme synthase middle domains-like PLP-dependent transferases 11
Homocysteine S-methyltransferase Methionine synthase domain 11
CarD-like TRCF domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Galactose mutarotase-like (Trans)glycosidases 11
Translation proteins Translation proteins 11
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 11
AbrB/MazE/MraZ-like GAF domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
SH3-domain SH3-domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
TGS-like Class II aaRS and biotin synthetases 11
Galactose mutarotase-like Galactose mutarotase-like 11
Carbamate kinase-like ACT-like 11
LigB-like AMMECR1-like 11
PGBD-like PGBD-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
HAMP domain-like GAF domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
2Fe-2S ferredoxin-like Actin-like ATPase domain 11
DNA primase core N-terminal domain of DnaB helicase 11
YjeF N-terminal domain-like Ribokinase-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
PDZ domain-like ClpP/crotonase 11
PDZ domain-like Radical SAM enzymes 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
DNA clamp DNA clamp 11
RuvA domain 2-like BRCT domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Putative DNA-binding domain Resolvase-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Protein kinase-like (PK-like) Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11

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