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Domain combination pairs in Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

354 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 106
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 92
Type I dockerin domain "Helical backbone" metal receptor 91
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 63
ACT-like ACT-like 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 62
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 54
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 52
PurM N-terminal domain-like PurM C-terminal domain-like 52
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 51
Class II aaRS and biotin synthetases Class II aaRS ABD-related 44
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 41
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 41
P-loop containing nucleoside triphosphate hydrolases Translation proteins 43
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 42
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 42
"Winged helix" DNA-binding domain GAD domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Actin-like ATPase domain Actin-like ATPase domain 33
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 32
L domain-like L domain-like 32
ADC-like Cdc48 domain 2-like 31
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 33
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 32
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Phospholipase D/nuclease Phospholipase D/nuclease 32
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 31
Thiolase-like Thiolase-like 31
ADC-like P-loop containing nucleoside triphosphate hydrolases 31
Actin-like ATPase domain 4Fe-4S ferredoxins 31
Iron-dependent repressor protein, dimerization domain C-terminal domain of transcriptional repressors 21
Pectin lyase-like Pectin lyase-like 21
Adenine nucleotide alpha hydrolases-like 4Fe-4S ferredoxins 22
Translational machinery components L30e-like 22
Pre-PUA domain PUA domain-like 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
lambda repressor-like DNA-binding domains CBS-domain pair 21
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
Periplasmic binding protein-like II Periplasmic binding protein-like II 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases vWA-like 21
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 22
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 22
Ribosomal L27 protein-like Nucleic acid-binding proteins 22
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 21
lambda repressor-like DNA-binding domains RmlC-like cupins 21
Glutamine synthetase/guanido kinase GatB/YqeY motif 22
P-loop containing nucleoside triphosphate hydrolases TGS-like 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 21
GroEL-intermediate domain like GroEL apical domain-like 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
P-loop containing nucleoside triphosphate hydrolases "Helical backbone" metal receptor 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Ferritin-like Rubredoxin-like 21
GroEL equatorial domain-like GroEL apical domain-like 21
Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 21
Calcium ATPase, transduction domain A HAD-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
PhoU-like TrkA C-terminal domain-like 21
tRNA-guanine transglycosylase PUA domain-like 22
GroEL equatorial domain-like GroEL-intermediate domain like 21
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 22
Ribbon-helix-helix ACT-like 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
tRNA-guanine transglycosylase Pre-PUA domain 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Flavoproteins 4Fe-4S ferredoxins 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
HAD-like Calcium ATPase, transmembrane domain M 22
HCP-like HCP-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 22
CBS-domain pair CBS-domain pair 22
Quinoprotein alcohol dehydrogenase-like ABC transporter involved in vitamin B12 uptake, BtuC 11
Pseudouridine synthase PUA domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
Aldolase NAD(P)-binding Rossmann-fold domains 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
TATA-box binding protein-like TATA-box binding protein-like 11
FYSH domain EF-G C-terminal domain-like 11
TPR-like TPR-like 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Class II aaRS and biotin synthetases GAD domain-like 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Serine metabolism enzymes domain ACT-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
PreATP-grasp domain Methylglyoxal synthase-like 11
tRNA-binding arm Class II aaRS and biotin synthetases 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 11
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 11
Cyclin-like Cyclin-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Uracil-DNA glycosylase-like Pre-PUA domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Hedgehog/intein (Hint) domain P-loop containing nucleoside triphosphate hydrolases 11
Dom34/Pelota N-terminal domain-like L30e-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Carboxypeptidase regulatory domain-like Cna protein B-type domain 11
MgtE membrane domain-like MgtE membrane domain-like 11
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase catalytic, N-terminal domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
L9 N-domain-like Ribonuclease H-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
LeuD/IlvD-like Nudix 11
Fic-like "Winged helix" DNA-binding domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 11
Tropomyosin Smc hinge domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Initiation factor IF2/eIF5b, domain 3 Translation proteins 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
PreATP-grasp domain Rudiment single hybrid motif 11
"Winged helix" DNA-binding domain TPR-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
Zinc-binding domain of translation initiation factor 2 beta Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
FAD/NAD(P)-binding domain Nucleotide-binding domain 11
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 11
PYP-like sensor domain (PAS domain) CheY-like 11
tRNA-guanine transglycosylase Uracil-DNA glycosylase-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
"Winged helix" DNA-binding domain Riboflavin kinase-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
C-terminal effector domain of the bipartite response regulators Ribbon-helix-helix 11
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Nucleotidyltransferase PHP domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
DNA clamp DNA clamp 11
tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease catalytic domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Uracil-DNA glycosylase-like PUA domain-like 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
ACT-like Metallo-hydrolase/oxidoreductase 11
PKD domain Cadherin-like 11
MFS general substrate transporter MFS general substrate transporter 11
TATA-box binding protein-like DNA-glycosylase 11
GatD N-terminal domain-like Glutaminase/Asparaginase 11
PDZ domain-like PDZ domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Ribulose-phoshate binding barrel RraA-like 11
HMA, heavy metal-associated domain HAD-like 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
FMN-binding split barrel 4Fe-4S ferredoxins 11
NAD(P)-linked oxidoreductase alpha-helical ferredoxin 11
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 11
Carboxypeptidase regulatory domain-like Hypothetical protein PA1324 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
EF-G C-terminal domain-like EF-G C-terminal domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
CBS-domain pair ParB/Sulfiredoxin 11
Nucleotidylyl transferase ITPase-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
cAMP-binding domain-like "Winged helix" DNA-binding domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PRTase-like PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Carbamate kinase-like PUA domain-like 11
Translation proteins EF-G C-terminal domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
GAD domain-like GatB/YqeY motif 11
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Nucleic acid-binding proteins 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 11
Carbamate kinase-like ACT-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Rubredoxin-like Superoxide reductase-like 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
ACT-like 4Fe-4S ferredoxins 11
PreATP-grasp domain PreATP-grasp domain 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
HisI-like all-alpha NTP pyrophosphatases 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
TPR-like HCP-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
GroES-like NAD(P)-binding Rossmann-fold domains 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Translation proteins ThrRS/AlaRS common domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase S13-like H2TH domain 11
Periplasmic binding protein-like II ACT-like 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
Peptide methionine sulfoxide reductase Mss4-like 11
Glutamine synthetase/guanido kinase GAD domain-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
PHP14-like Phospholipase D/nuclease 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
P-loop containing nucleoside triphosphate hydrolases MOP-like 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
Siroheme synthase middle domains-like Glutamyl tRNA-reductase dimerization domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
S13-like H2TH domain Ribosomal protein S5 domain 2-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
beta-lactamase/transpeptidase-like TT1751-like 11
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Hypothetical protein AF0491, middle domain EF-G C-terminal domain-like 11
Zinc beta-ribbon Cyclin-like 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
Metallo-dependent phosphatases HD-domain/PDEase-like 11
tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like 11
PUA domain-like 4Fe-4S ferredoxins 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Siroheme synthase middle domains-like Glutamyl tRNA-reductase catalytic, N-terminal domain 11
PPK N-terminal domain-like PHP14-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 11
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
P-loop containing nucleoside triphosphate hydrolases HSP20-like chaperones 11
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 11
PP2C-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Radical SAM enzymes Thioredoxin-like 11
S-adenosyl-L-methionine-dependent methyltransferases "Winged helix" DNA-binding domain 11
YjeF N-terminal domain-like Ribokinase-like 11
PUA domain-like Adenine nucleotide alpha hydrolases-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 11
SIS domain HAD-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
THUMP domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
Hedgehog/intein (Hint) domain Hedgehog/intein (Hint) domain 11
Nucleic acid-binding proteins Hedgehog/intein (Hint) domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
Nucleic acid-binding proteins GAD domain-like 11
Putative DNA-binding domain PheT/TilS domain 11
Periplasmic binding protein-like II GlnB-like 11
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 11
Nucleic acid-binding proteins Nucleic acid-binding proteins 11
ALDH-like Acetyl-CoA synthetase-like 11
Putative DNA-binding domain Putative DNA-binding domain 11
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
Radical SAM enzymes RuvA domain 2-like 11
Hypothetical protein PA1324 Cna protein B-type domain 11
FYSH domain Hypothetical protein AF0491, middle domain 11
Nucleotide-binding domain 4Fe-4S ferredoxins 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11

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