All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.
The links below permit the addition or removal of specific sets of domain combination pairs.
Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.
Superfamily (N) | Superfamily (C) | Number of occurrances | Number unique | |
P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | 90 | 33 | |
Actin-like ATPase domain | Actin-like ATPase domain | 56 | 10 | |
F-box domain | RNI-like | 47 | 9 | |
Metal cation-transporting ATPase, ATP-binding domain N | HAD-like | 36 | 3 | |
Metal cation-transporting ATPase, ATP-binding domain N | Calcium ATPase, transmembrane domain M | 36 | 3 | |
RNA-binding domain, RBD | RNA-binding domain, RBD | 36 | 17 | |
HAD-like | Calcium ATPase, transmembrane domain M | 36 | 3 | |
beta-beta-alpha zinc fingers | beta-beta-alpha zinc fingers | 35 | 11 | |
Calcium ATPase, transduction domain A | HAD-like | 35 | 2 | |
Calcium ATPase, transduction domain A | Calcium ATPase, transmembrane domain M | 35 | 2 | |
Calcium ATPase, transduction domain A | Metal cation-transporting ATPase, ATP-binding domain N | 35 | 2 | |
ARM repeat | ARM repeat | 33 | 18 | |
ABC transporter transmembrane region | P-loop containing nucleoside triphosphate hydrolases | 29 | 6 | |
Ypt/Rab-GAP domain of gyp1p | Ypt/Rab-GAP domain of gyp1p | 28 | 9 | |
TPR-like | TPR-like | 27 | 11 | |
GroES-like | NAD(P)-binding Rossmann-fold domains | 27 | 2 | |
DBL homology domain (DH-domain) | PH domain-like | 23 | 10 | |
HCP-like | HCP-like | 21 | 8 | |
Acyl-CoA dehydrogenase NM domain-like | Acyl-CoA dehydrogenase C-terminal domain-like | 21 | 6 | |
ABC transporter transmembrane region | ABC transporter transmembrane region | 20 | 4 | |
Homeodomain-like | Homeodomain-like | 18 | 11 | |
Thioredoxin-like | GST C-terminal domain-like | 18 | 3 | |
Riboflavin synthase domain-like | Ferredoxin reductase-like, C-terminal NADP-linked domain | 17 | 8 | |
P-loop containing nucleoside triphosphate hydrolases | Translation proteins | 17 | 8 | |
FAD/NAD(P)-binding domain | FAD-linked reductases, C-terminal domain | 17 | 5 | |
NAD(P)-binding Rossmann-fold domains | 6-phosphogluconate dehydrogenase C-terminal domain-like | 16 | 4 | |
FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | 16 | 8 | |
ARM repeat | Protein kinase-like (PK-like) | 15 | 13 | |
F-box domain | WD40 repeat-like | 15 | 7 | |
Thiolase-like | Thiolase-like | 15 | 3 | |
PreATP-grasp domain | Glutathione synthetase ATP-binding domain-like | 14 | 10 | |
NAD(P)-binding Rossmann-fold domains | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 14 | 4 | |
Aminoacid dehydrogenase-like, N-terminal domain | NAD(P)-binding Rossmann-fold domains | 13 | 7 | |
RING/U-box | RING/U-box | 13 | 10 | |
Thiamin diphosphate-binding fold (THDP-binding) | Thiamin diphosphate-binding fold (THDP-binding) | 12 | 4 | |
MFS general substrate transporter | MFS general substrate transporter | 12 | 3 | |
Transducin (alpha subunit), insertion domain | P-loop containing nucleoside triphosphate hydrolases | 12 | 2 | |
WD40 repeat-like | WD40 repeat-like | 12 | 8 | |
Nucleotidylyl transferase | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 12 | 8 | |
Glucocorticoid receptor-like (DNA-binding domain) | Glucocorticoid receptor-like (DNA-binding domain) | 11 | 8 | |
HSP40/DnaJ peptide-binding domain | HSP40/DnaJ peptide-binding domain | 10 | 4 | |
Nucleic acid-binding proteins | Nucleic acid-binding proteins | 10 | 7 | |
P-loop containing nucleoside triphosphate hydrolases | Ribosomal protein S5 domain 2-like | 10 | 7 | |
GroEL equatorial domain-like | GroEL apical domain-like | 10 | 1 | |
GroEL equatorial domain-like | GroEL-intermediate domain like | 10 | 1 | |
PreATP-grasp domain | Rudiment single hybrid motif | 10 | 7 | |
GroEL-intermediate domain like | GroEL apical domain-like | 10 | 1 | |
Nucleotidyltransferase | PAP/OAS1 substrate-binding domain | 10 | 5 | |
Glutathione synthetase ATP-binding domain-like | Rudiment single hybrid motif | 10 | 7 | |
SH3-domain | SH3-domain | 10 | 6 | |
Actin-like ATPase domain | Heat shock protein 70kD (HSP70), peptide-binding domain | 10 | 3 | |
Actin-like ATPase domain | Heat shock protein 70kD (HSP70), C-terminal subdomain | 10 | 3 | |
Eukaryotic type KH-domain (KH-domain type I) | Eukaryotic type KH-domain (KH-domain type I) | 9 | 8 | |
Heat shock protein 70kD (HSP70), peptide-binding domain | Heat shock protein 70kD (HSP70), C-terminal subdomain | 9 | 2 | |
Class II aaRS and biotin synthetases | Class II aaRS ABD-related | 9 | 7 | |
BAR/IMD domain-like | SH3-domain | 9 | 5 | |
Chaperone J-domain | HSP40/DnaJ peptide-binding domain | 9 | 3 | |
(Trans)glycosidases | Chitinase insertion domain | 9 | 2 | |
CRAL/TRIO N-terminal domain | CRAL/TRIO domain | 9 | 4 | |
Cytochrome b5-like heme/steroid binding domain | Nucleotide-diphospho-sugar transferases | 9 | 3 | |
Thioesterase/thiol ester dehydrase-isomerase | Thioesterase/thiol ester dehydrase-isomerase | 9 | 6 | |
LuxS/MPP-like metallohydrolase | LuxS/MPP-like metallohydrolase | 9 | 6 | |
Tubulin nucleotide-binding domain-like | Tubulin C-terminal domain-like | 8 | 1 | |
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | CheY-like | 8 | 8 | |
Acyl-CoA dehydrogenase C-terminal domain-like | Acyl-CoA dehydrogenase C-terminal domain-like | 8 | 2 | |
CBS-domain pair | CBS-domain pair | 8 | 3 | |
Translation proteins | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 8 | 2 | |
Cyclin-like | Cyclin-like | 8 | 3 | |
ENTH/VHS domain | GAT-like domain | 8 | 7 | |
Composite domain of metallo-dependent hydrolases | Metallo-dependent hydrolases | 8 | 6 | |
Translation proteins SH3-like domain | Nucleic acid-binding proteins | 8 | 4 | |
Formate/glycerate dehydrogenase catalytic domain-like | NAD(P)-binding Rossmann-fold domains | 8 | 2 | |
N-terminal domain of alpha and beta subunits of F1 ATP synthase | C-terminal domain of alpha and beta subunits of F1 ATP synthase | 8 | 3 | |
P-loop containing nucleoside triphosphate hydrolases | C-terminal domain of alpha and beta subunits of F1 ATP synthase | 8 | 3 | |
UBA-like | Ubiquitin-like | 8 | 7 | |
P-loop containing nucleoside triphosphate hydrolases | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 8 | 2 | |
Homodimeric domain of signal transducing histidine kinase | CheY-like | 8 | 8 | |
Homodimeric domain of signal transducing histidine kinase | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 8 | 8 | |
Cation efflux protein transmembrane domain-like | Cation efflux protein cytoplasmic domain-like | 8 | 3 | |
N-terminal domain of alpha and beta subunits of F1 ATP synthase | P-loop containing nucleoside triphosphate hydrolases | 8 | 3 | |
Phospholipase D/nuclease | Phospholipase D/nuclease | 8 | 5 | |
Kelch motif | Kelch motif | 7 | 2 | |
Flavoproteins | Riboflavin synthase domain-like | 7 | 4 | |
Chaperone J-domain | DnaJ/Hsp40 cysteine-rich domain | 7 | 2 | |
Cupredoxins | Cupredoxins | 7 | 4 | |
CoA-dependent acyltransferases | CoA-dependent acyltransferases | 7 | 2 | |
Translation proteins | EF-G C-terminal domain-like | 7 | 4 | |
P-loop containing nucleoside triphosphate hydrolases | EF-G C-terminal domain-like | 7 | 4 | |
ACT-like | ACT-like | 7 | 3 | |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | Adenine nucleotide alpha hydrolases-like | 7 | 2 | |
(Trans)glycosidases | Glycosyl hydrolase domain | 7 | 4 | |
EF-G C-terminal domain-like | EF-G C-terminal domain-like | 7 | 4 | |
BAR/IMD domain-like | GTPase activation domain, GAP | 7 | 6 | |
DnaJ/Hsp40 cysteine-rich domain | HSP40/DnaJ peptide-binding domain | 7 | 2 | |
Chromo domain-like | P-loop containing nucleoside triphosphate hydrolases | 7 | 6 | |
PA domain | Zn-dependent exopeptidases | 7 | 2 | |
Thioredoxin-like | Thioredoxin-like | 7 | 4 | |
P-loop containing nucleoside triphosphate hydrolases | Nucleotide-diphospho-sugar transferases | 7 | 2 | |
L domain-like | L domain-like | 7 | 4 | |
CCCH zinc finger | CCCH zinc finger | 7 | 5 | |
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | Ribosomal protein S5 domain 2-like | 7 | 6 | |
P-loop containing nucleoside triphosphate hydrolases | Cytochrome b5-like heme/steroid binding domain | 7 | 2 | |
P-loop containing nucleoside triphosphate hydrolases | Phosphoglycerate mutase-like | 7 | 1 | |
UDP-Glycosyltransferase/glycogen phosphorylase | HAD-like | 7 | 2 | |
FAS1 domain | FAS1 domain | 7 | 4 | |
Creatinase/prolidase N-terminal domain | Creatinase/aminopeptidase | 7 | 3 | |
Cytochrome b5-like heme/steroid binding domain | Acyl-CoA dehydrogenase C-terminal domain-like | 6 | 2 | |
Zn-dependent exopeptidases | Transferrin receptor-like dimerisation domain | 6 | 1 | |
ValRS/IleRS/LeuRS editing domain | Nucleotidylyl transferase | 6 | 3 | |
ValRS/IleRS/LeuRS editing domain | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 6 | 3 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 3 | |
beta-sandwich domain of Sec23/24 | C-terminal, gelsolin-like domain of Sec23/24 | 6 | 3 | |
PYP-like sensor domain (PAS domain) | PYP-like sensor domain (PAS domain) | 6 | 4 | |
Aconitase iron-sulfur domain | LeuD/IlvD-like | 6 | 1 | |
DNA repair protein MutS, domain III | P-loop containing nucleoside triphosphate hydrolases | 6 | 5 | |
ACP-like | NAD(P)-binding Rossmann-fold domains | 6 | 2 | |
PreATP-grasp domain | Single hybrid motif | 6 | 3 | |
PA domain | Transferrin receptor-like dimerisation domain | 6 | 1 | |
Thiamin diphosphate-binding fold (THDP-binding) | TK C-terminal domain-like | 6 | 4 | |
PYP-like sensor domain (PAS domain) | Glucocorticoid receptor-like (DNA-binding domain) | 6 | 3 | |
ARM repeat | Formin homology 2 domain (FH2 domain) | 6 | 3 | |
Cytochrome b5-like heme/steroid binding domain | Acyl-CoA dehydrogenase NM domain-like | 6 | 2 | |
Ribonuclease H-like | DNA/RNA polymerases | 6 | 4 | |
P-loop containing nucleoside triphosphate hydrolases | post-AAA+ oligomerization domain-like | 6 | 3 | |
Zn-finger domain of Sec23/24 | Helical domain of Sec23/24 | 6 | 3 | |
Nucleic acid-binding proteins | Class II aaRS and biotin synthetases | 6 | 3 | |
PA domain | Subtilisin-like | 6 | 2 | |
RNA-binding domain, RBD | PABC (PABP) domain | 6 | 3 | |
Zn-finger domain of Sec23/24 | C-terminal, gelsolin-like domain of Sec23/24 | 6 | 3 | |
ClpP/crotonase | ClpP/crotonase | 6 | 3 | |
BAR/IMD domain-like | PH domain-like | 6 | 4 | |
beta-sandwich domain of Sec23/24 | vWA-like | 6 | 3 | |
Nucleic acid-binding proteins | P-loop containing nucleoside triphosphate hydrolases | 6 | 2 | |
Zn-finger domain of Sec23/24 | vWA-like | 6 | 3 | |
Acetyl-CoA synthetase-like | NAD(P)-binding Rossmann-fold domains | 6 | 2 | |
His-Me finger endonucleases | His-Me finger endonucleases | 6 | 3 | |
vWA-like | Helical domain of Sec23/24 | 6 | 3 | |
Helical domain of Sec23/24 | C-terminal, gelsolin-like domain of Sec23/24 | 6 | 3 | |
Acetyl-CoA synthetase-like | ACP-like | 6 | 2 | |
Thiamin diphosphate-binding fold (THDP-binding) | DHS-like NAD/FAD-binding domain | 6 | 1 | |
cAMP-binding domain-like | cAMP-binding domain-like | 6 | 4 | |
DNA repair protein MutS, domain II | DNA repair protein MutS, domain III | 6 | 5 | |
Rudiment single hybrid motif | Single hybrid motif | 6 | 3 | |
beta-sandwich domain of Sec23/24 | Zn-finger domain of Sec23/24 | 6 | 3 | |
vWA-like | C-terminal, gelsolin-like domain of Sec23/24 | 6 | 3 | |
EF-hand | EF-hand | 6 | 5 | |
EF-G C-terminal domain-like | Ribosomal protein S5 domain 2-like | 6 | 3 | |
Chromo domain-like | Chromo domain-like | 6 | 4 | |
beta-sandwich domain of Sec23/24 | Helical domain of Sec23/24 | 6 | 3 | |
Flavoproteins | Ferredoxin reductase-like, C-terminal NADP-linked domain | 6 | 3 | |
p53-like transcription factors | DNA-binding protein LAG-1 (CSL) | 6 | 5 | |
Translation proteins | Ribosomal protein S5 domain 2-like | 6 | 3 | |
Glutathione synthetase ATP-binding domain-like | Single hybrid motif | 6 | 3 | |
NAD(P)-binding Rossmann-fold domains | LDH C-terminal domain-like | 5 | 1 | |
SH3-domain | PH domain-like | 5 | 4 | |
Cullin repeat-like | "Winged helix" DNA-binding domain | 5 | 1 | |
RNA-binding domain, RBD | ARM repeat | 5 | 2 | |
PH domain-like | Calponin-homology domain, CH-domain | 5 | 4 | |
Ribosomal protein S5 domain 2-like | GHMP Kinase, C-terminal domain | 5 | 2 | |
Ribosomal protein S5 domain 2-like | Ribonuclease PH domain 2-like | 5 | 1 | |
Galactose mutarotase-like | (Trans)glycosidases | 5 | 2 | |
SNARE-like | Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 5 | 2 | |
Cullin repeat-like | Cullin homology domain | 5 | 1 | |
Kelch motif | POZ domain | 5 | 2 | |
TPR-like | HCP-like | 5 | 4 | |
RING/U-box | RNA-binding domain, RBD | 5 | 5 | |
FAD/NAD(P)-binding domain | FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 5 | 3 | |
Cullin homology domain | "Winged helix" DNA-binding domain | 5 | 1 | |
Bromodomain | Bromodomain | 5 | 4 | |
Single hybrid motif | CoA-dependent acyltransferases | 5 | 3 | |
"Winged helix" DNA-binding domain | PH domain-like | 5 | 4 | |
PIN domain-like | 5' to 3' exonuclease, C-terminal subdomain | 5 | 3 | |
Leukotriene A4 hydrolase N-terminal domain | Metalloproteases ("zincins"), catalytic domain | 5 | 3 | |
Galactose-binding domain-like | Galactose-binding domain-like | 5 | 4 | |
E set domains | E set domains | 5 | 1 | |
ARM repeat | WD40 repeat-like | 5 | 5 | |
(Trans)glycosidases | Beta-D-glucan exohydrolase, C-terminal domain | 5 | 2 | |
RING/U-box | WD40 repeat-like | 5 | 4 | |
Single hybrid motif | Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 5 | 3 | |
SMAD/FHA domain | RING/U-box | 5 | 4 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | Protein kinase-like (PK-like) | 5 | 4 | |
GTPase activation domain, GAP | RGC domain-like | 5 | 2 | |
CorA soluble domain-like | Magnesium transport protein CorA, transmembrane region | 5 | 1 | |
Zn-dependent exopeptidases | Bacterial exopeptidase dimerisation domain | 5 | 2 | |
GTPase activation domain, GAP | CRAL/TRIO domain | 5 | 5 | |
alpha-ketoacid dehydrogenase kinase, N-terminal domain | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 2 | |
Galactose mutarotase-like | Glycosyl hydrolase domain | 5 | 2 | |
Multidrug resistance efflux transporter EmrE | Multidrug resistance efflux transporter EmrE | 5 | 4 | |
DNA repair protein MutS, domain II | P-loop containing nucleoside triphosphate hydrolases | 5 | 4 | |
P-loop containing nucleoside triphosphate hydrolases | SMAD/FHA domain | 4 | 2 | |
SNARE-like | SNARE fusion complex | 4 | 2 | |
Nucleotide-binding domain | FAD-linked reductases, C-terminal domain | 4 | 2 | |
Nucleotidyltransferase | PAP/Archaeal CCA-adding enzyme, C-terminal domain | 4 | 2 | |
"Winged helix" DNA-binding domain | DBL homology domain (DH-domain) | 4 | 3 | |
PUA domain-like | RING/U-box | 4 | 3 | |
RING/U-box | P-loop containing nucleoside triphosphate hydrolases | 4 | 3 | |
Myosin S1 fragment, N-terminal domain | P-loop containing nucleoside triphosphate hydrolases | 4 | 3 | |
Ribosomal protein S5 domain 2-like | HSP90 C-terminal domain | 4 | 3 | |
HIT/MYND zinc finger-like | SET domain | 4 | 2 | |
Sec7 domain | PH domain-like | 4 | 2 | |
SAM/Pointed domain | Calponin-homology domain, CH-domain | 4 | 3 | |
FAD/NAD(P)-binding domain | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 4 | 3 | |
DNA-binding protein LAG-1 (CSL) | E set domains | 4 | 3 | |
RNI-like | RNI-like | 4 | 4 | |
F-box domain | DUSP-like | 4 | 3 | |
Ubiquitin-like | BAG domain | 4 | 2 | |
"Winged helix" DNA-binding domain | "Winged helix" DNA-binding domain | 4 | 3 | |
ARM repeat | GTPase activation domain, GAP | 4 | 4 | |
SH3-domain | Calponin-homology domain, CH-domain | 4 | 3 | |
SH3-domain | SAM/Pointed domain | 4 | 3 | |
p53-like transcription factors | E set domains | 4 | 3 | |
Protein kinase-like (PK-like) | CheY-like | 4 | 4 | |
DNA ligase/mRNA capping enzyme, catalytic domain | Nucleic acid-binding proteins | 4 | 4 | |
Prokaryotic type KH domain (KH-domain type II) | Ribosomal protein S3 C-terminal domain | 4 | 1 | |
dsRNA-binding domain-like | Ribosomal protein S5 domain 2-like | 4 | 2 | |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | CoA-dependent acyltransferases | 4 | 2 | |
P-loop containing nucleoside triphosphate hydrolases | TGS-like | 4 | 1 | |
TRAF domain-like | Cysteine proteinases | 4 | 3 | |
PX domain | BAR/IMD domain-like | 4 | 2 | |
PDZ domain-like | PDZ domain-like | 4 | 4 | |
FAD-binding/transporter-associated domain-like | FAD-linked oxidases, C-terminal domain | 4 | 2 | |
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | HSP90 C-terminal domain | 4 | 3 | |
P-loop containing nucleoside triphosphate hydrolases | FtsH protease domain-like | 4 | 1 | |
E set domains | Ankyrin repeat | 4 | 2 | |
PA domain | RING/U-box | 4 | 2 | |
PAH2 domain | PAH2 domain | 4 | 3 | |
ARM repeat | Clathrin adaptor appendage domain | 4 | 4 | |
P-loop containing nucleoside triphosphate hydrolases | "Winged helix" DNA-binding domain | 4 | 3 | |
WW domain | WW domain | 4 | 3 | |
Galactose oxidase, central domain | Kelch motif | 4 | 4 | |
HMG-box | HMG-box | 4 | 1 | |
PAP/OAS1 substrate-binding domain | PAP/Archaeal CCA-adding enzyme, C-terminal domain | 4 | 2 | |
SAM/Pointed domain | PH domain-like | 4 | 3 | |
Thioredoxin-like | Ubiquitin-like | 4 | 4 | |
R1 subunit of ribonucleotide reductase, N-terminal domain | PFL-like glycyl radical enzymes | 4 | 1 | |
EF-hand | Mitochondrial carrier | 4 | 2 | |
Ribosomal L11/L12e N-terminal domain | Ribosomal protein L11, C-terminal domain | 4 | 1 | |
TPR-like | Chaperone J-domain | 4 | 3 | |
SMAD/FHA domain | PH domain-like | 4 | 2 | |
DPP6 N-terminal domain-like | alpha/beta-Hydrolases | 4 | 2 | |
PH domain-like | GTPase activation domain, GAP | 4 | 4 | |
FYVE/PHD zinc finger | FYVE/PHD zinc finger | 3 | 3 | |
Creatinase/aminopeptidase | "Winged helix" DNA-binding domain | 3 | 2 | |
Glutathione synthetase ATP-binding domain-like | Methylglyoxal synthase-like | 3 | 2 | |
PH domain-like | CAD & PB1 domains | 3 | 2 | |
Ubiquitin-like | Zn-binding ribosomal proteins | 3 | 1 | |
DNA repair protein MutS, domain I | P-loop containing nucleoside triphosphate hydrolases | 3 | 3 | |
Translational machinery components | L30e-like | 3 | 3 | |
ThrRS/AlaRS common domain | Class II aaRS and biotin synthetases | 3 | 2 | |
ARM repeat | Subdomain of clathrin and coatomer appendage domain | 3 | 3 | |
DNA/RNA polymerases | Lesion bypass DNA polymerase (Y-family), little finger domain | 3 | 3 | |
Voltage-gated potassium channels | Voltage-gated potassium channels | 3 | 3 | |
Succinyl-CoA synthetase domains | NAD(P)-binding Rossmann-fold domains | 3 | 2 | |
PX domain | CAD & PB1 domains | 3 | 2 | |
"Winged helix" DNA-binding domain | Regulator of G-protein signaling, RGS | 3 | 2 | |
Ribosomal L27 protein-like | Nucleic acid-binding proteins | 3 | 2 | |
ARM repeat | CRAL/TRIO domain | 3 | 3 | |
PH domain-like | Protein kinase-like (PK-like) | 3 | 1 | |
DNA repair protein MutS, domain I | DNA repair protein MutS, domain II | 3 | 3 | |
Phosphoglucomutase, first 3 domains | Phosphoglucomutase, first 3 domains | 3 | 3 | |
WD40 repeat-like | DPP6 N-terminal domain-like | 3 | 3 | |
Rhodanese/Cell cycle control phosphatase | (Phosphotyrosine protein) phosphatases II | 3 | 2 | |
DNA repair protein MutS, domain I | DNA repair protein MutS, domain III | 3 | 3 | |
Phosphoenolpyruvate/pyruvate domain | PK C-terminal domain-like | 3 | 1 | |
Glutathione synthetase ATP-binding domain-like | Glutathione synthetase ATP-binding domain-like | 3 | 2 | |
GAF domain-like | Homodimeric domain of signal transducing histidine kinase | 3 | 3 | |
alpha/beta-Hydrolases | (Phosphotyrosine protein) phosphatases II | 3 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | DEK C-terminal domain | 3 | 1 | |
Nucleotide-diphospho-sugar transferases | DEK C-terminal domain | 3 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Sec63 N-terminal domain-like | 3 | 2 | |
Zinc beta-ribbon | Cyclin-like | 3 | 1 | |
Sec63 N-terminal domain-like | E set domains | 3 | 2 | |
SET domain | SET domain | 3 | 3 | |
BAR/IMD domain-like | ArfGap/RecO-like zinc finger | 3 | 2 | |
Nucleotide-diphospho-sugar transferases | Trimeric LpxA-like enzymes | 3 | 2 | |
P-loop containing nucleoside triphosphate hydrolases | EF-hand | 3 | 2 | |
P-loop containing nucleoside triphosphate hydrolases | PH domain-like | 3 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Homodimeric domain of signal transducing histidine kinase | 3 | 3 | |
Protein kinase-like (PK-like) | GAF domain-like | 3 | 3 | |
PH domain-like | ArfGap/RecO-like zinc finger | 3 | 2 | |
Calponin-homology domain, CH-domain | EF-hand | 3 | 2 | |
HR1 repeat | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 2 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | Cysteine-rich domain | 3 | 2 | |
GAF domain-like | CheY-like | 3 | 3 | |
PEP carboxykinase N-terminal domain | PEP carboxykinase-like | 3 | 1 | |
Protein kinase-like (PK-like) | P-loop containing nucleoside triphosphate hydrolases | 3 | 3 | |
Protein kinase-like (PK-like) | KA1-like | 3 | 3 | |
P-loop containing nucleoside triphosphate hydrolases | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 3 | 3 | |
PUA domain-like | P-loop containing nucleoside triphosphate hydrolases | 3 | 3 | |
Calponin-homology domain, CH-domain | GAS2 domain-like | 3 | 2 | |
SET domain | RuBisCo LSMT C-terminal, substrate-binding domain | 3 | 3 | |
PK beta-barrel domain-like | PK C-terminal domain-like | 3 | 1 | |
Nitrite/Sulfite reductase N-terminal domain-like | Nitrite and sulphite reductase 4Fe-4S domain-like | 3 | 3 | |
Clathrin adaptor appendage domain | Subdomain of clathrin and coatomer appendage domain | 3 | 3 | |
P-loop containing nucleoside triphosphate hydrolases | GAF domain-like | 3 | 3 | |
Carbamoyl phosphate synthetase, large subunit connection domain | Methylglyoxal synthase-like | 3 | 2 | |
PreATP-grasp domain | Methylglyoxal synthase-like | 3 | 2 | |
"Winged helix" DNA-binding domain | Sec63 N-terminal domain-like | 3 | 2 | |
HR1 repeat | Protein kinase-like (PK-like) | 3 | 2 | |
Thioesterase/thiol ester dehydrase-isomerase | NAD(P)-binding Rossmann-fold domains | 3 | 3 | |
NagB/RpiA/CoA transferase-like | D-ribose-5-phosphate isomerase (RpiA), lid domain | 3 | 1 | |
(Phosphotyrosine protein) phosphatases II | (Phosphotyrosine protein) phosphatases II | 3 | 2 | |
HR1 repeat | Cysteine-rich domain | 3 | 2 | |
Cysteine-rich domain | Protein kinase-like (PK-like) | 3 | 2 | |
PreATP-grasp domain | PreATP-grasp domain | 3 | 2 | |
Ankyrin repeat | Ankyrin repeat | 3 | 3 | |
Translation proteins | ThrRS/AlaRS common domain | 3 | 2 | |
Retrovirus zinc finger-like domains | Retrovirus zinc finger-like domains | 3 | 2 | |
Ubiquitin-like | Ubiquitin-like | 3 | 3 | |
PreATP-grasp domain | Carbamoyl phosphate synthetase, large subunit connection domain | 3 | 2 | |
SH3-domain | Ubiquitin-like | 3 | 1 | |
NAD-binding domain of HMG-CoA reductase | Substrate-binding domain of HMG-CoA reductase | 3 | 1 | |
PH domain-like | PH domain-like | 3 | 3 | |
EF-hand | Sm-like ribonucleoproteins | 3 | 2 | |
P-loop containing nucleoside triphosphate hydrolases | CheY-like | 3 | 3 | |
Nucleotide-binding domain | Nucleotide-binding domain | 3 | 3 | |
GAF domain-like | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 3 | 3 | |
beta-N-acetylhexosaminidase-like domain | (Trans)glycosidases | 3 | 1 | |
Regulator of G-protein signaling, RGS | FAD/NAD(P)-binding domain | 3 | 2 | |
Ribosomal protein L6 | Ribosomal protein L6 | 3 | 1 | |
Carbamoyl phosphate synthetase, small subunit N-terminal domain | Class I glutamine amidotransferase-like | 3 | 2 | |
WD40 repeat-like | Quinoprotein alcohol dehydrogenase-like | 3 | 3 | |
Enolase N-terminal domain-like | Enolase C-terminal domain-like | 3 | 1 | |
Cytochrome b5-like heme/steroid binding domain | DEK C-terminal domain | 3 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | NAD(P)-binding Rossmann-fold domains | 3 | 2 | |
PK beta-barrel domain-like | Phosphoenolpyruvate/pyruvate domain | 3 | 1 | |
Glutathione synthetase ATP-binding domain-like | Carbamoyl phosphate synthetase, large subunit connection domain | 3 | 2 | |
Metalloproteases ("zincins"), catalytic domain | Blood coagulation inhibitor (disintegrin) | 3 | 2 | |
PAZ domain | Ribonuclease H-like | 3 | 1 | |
Ypt/Rab-GAP domain of gyp1p | EF-hand | 3 | 3 | |
Phosphoglucomutase, first 3 domains | Phosphoglucomutase, C-terminal domain | 3 | 3 | |
RING/U-box | Cysteine proteinases | 3 | 3 | |
Protein kinase-like (PK-like) | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 3 | 3 | |
Cysteine-rich domain | Cysteine-rich domain | 3 | 2 | |
POZ domain | POZ domain | 3 | 3 | |
Trypsin-like serine proteases | Trypsin-like serine proteases | 3 | 3 | |
P-loop containing nucleoside triphosphate hydrolases | Aminoacid dehydrogenase-like, N-terminal domain | 3 | 2 | |
CBS-domain pair | CAD & PB1 domains | 3 | 2 | |
Protein kinase-like (PK-like) | Homodimeric domain of signal transducing histidine kinase | 3 | 3 | |
Trypsin-like serine proteases | PDZ domain-like | 3 | 3 | |
BRCT domain | Homeodomain-like | 3 | 1 | |
Galactose oxidase, central domain | SH3-domain | 3 | 3 | |
BRCT domain | BRCT domain | 3 | 3 | |
Smc hinge domain | P-loop containing nucleoside triphosphate hydrolases | 3 | 3 | |
tRNA-binding arm | Class II aaRS and biotin synthetases | 3 | 2 | |
PX domain | PH domain-like | 3 | 3 | |
DBL homology domain (DH-domain) | CAD & PB1 domains | 3 | 2 | |
CheY-like | CheY-like | 2 | 2 | |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | alpha-helical ferredoxin | 2 | 2 | |
Flavoproteins | Nitrite and sulphite reductase 4Fe-4S domain-like | 2 | 2 | |
RNA-binding domain, RBD | Ran binding protein zinc finger-like | 2 | 2 | |
PP2C-like | Nucleotide cyclase | 2 | 2 | |
Thioesterase/thiol ester dehydrase-isomerase | 4'-phosphopantetheinyl transferase | 2 | 2 | |
Alpha subunit of glutamate synthase, C-terminal domain | alpha-helical ferredoxin | 2 | 2 | |
FabD/lysophospholipase-like | Thioesterase/thiol ester dehydrase-isomerase | 2 | 2 | |
Nicotinate/Quinolinate PRTase N-terminal domain-like | Nicotinate/Quinolinate PRTase C-terminal domain-like | 2 | 1 | |
FabD/lysophospholipase-like | FabD/lysophospholipase-like | 2 | 2 | |
Cytochrome c | Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor | 2 | 1 | |
WW domain | Hect, E3 ligase catalytic domain | 2 | 1 | |
Carbamate kinase-like | ACT-like | 2 | 1 | |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | Nucleotide-binding domain | 2 | 2 | |
TATA-box binding protein-like | TATA-box binding protein-like | 2 | 1 | |
Galactose mutarotase-like | Hyaluronate lyase-like, C-terminal domain | 2 | 1 | |
Ricin B-like lectins | HAD-like | 2 | 2 | |
Glutathione synthetase ATP-binding domain-like | Aspartate/ornithine carbamoyltransferase | 2 | 1 | |
FabD/lysophospholipase-like | 4'-phosphopantetheinyl transferase | 2 | 2 | |
GST C-terminal domain-like | eEF1-gamma domain | 2 | 1 | |
GST C-terminal domain-like | eEF-1beta-like | 2 | 1 | |
L domain-like | DNase I-like | 2 | 2 | |
Thiolase-like | 4'-phosphopantetheinyl transferase | 2 | 2 | |
UBA-like | Chaperone J-domain | 2 | 2 | |
F-box domain | Quinoprotein alcohol dehydrogenase-like | 2 | 2 | |
Ricin B-like lectins | Ricin B-like lectins | 2 | 2 | |
Coiled-coil domain of nucleotide exchange factor GrpE | Head domain of nucleotide exchange factor GrpE | 2 | 1 | |
t-snare proteins | SNARE fusion complex | 2 | 1 | |
Ankyrin repeat | PLC-like phosphodiesterases | 2 | 1 | |
ClpS-like | "Winged helix" DNA-binding domain | 2 | 1 | |
Aldolase | Single hybrid motif | 2 | 1 | |
MurD-like peptide ligases, catalytic domain | MurD-like peptide ligases, peptide-binding domain | 2 | 2 | |
ARM repeat | P-loop containing nucleoside triphosphate hydrolases | 2 | 2 | |
FabD/lysophospholipase-like | NAD(P)-binding Rossmann-fold domains | 2 | 2 | |
Nucleotidylyl transferase | Nucleotidylyl transferase | 2 | 1 | |
Leucine zipper domain | YAP1 redox domain | 2 | 1 | |
2Fe-2S ferredoxin-like | alpha-helical ferredoxin | 2 | 1 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | WW domain | 2 | 1 | |
Methyl-accepting chemotaxis protein (MCP) signaling domain | CheY-like | 2 | 2 | |
TK C-terminal domain-like | Nitrite and sulphite reductase 4Fe-4S domain-like | 2 | 2 | |
Chromo domain-like | Acyl-CoA N-acyltransferases (Nat) | 2 | 2 | |
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | Translational machinery components | 2 | 2 | |
DNA-binding domain of Mlu1-box binding protein MBP1 | Ankyrin repeat | 2 | 2 | |
N-terminal, heterodimerisation domain of RBP7 (RpoE) | Nucleic acid-binding proteins | 2 | 1 | |
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain | WD40 repeat-like | 2 | 1 | |
FYVE/PHD zinc finger | RING/U-box | 2 | 2 | |
IlvD/EDD N-terminal domain-like | LeuD/IlvD-like | 2 | 1 | |
RNA-binding domain, RBD | Retrovirus zinc finger-like domains | 2 | 1 | |
Urease, gamma-subunit | Composite domain of metallo-dependent hydrolases | 2 | 1 | |
Chondroitin AC/alginate lyase | Hyaluronate lyase-like, C-terminal domain | 2 | 1 | |
Carbamate kinase-like | PUA domain-like | 2 | 1 | |
Thioesterase/thiol ester dehydrase-isomerase | Thiolase-like | 2 | 2 | |
Class I glutamine amidotransferase-like | Ribulose-phoshate binding barrel | 2 | 2 | |
Calponin-homology domain, CH-domain | EB1 dimerisation domain-like | 2 | 1 | |
FMN-linked oxidoreductases | Alpha subunit of glutamate synthase, C-terminal domain | 2 | 2 | |
P-loop containing nucleoside triphosphate hydrolases | E set domains | 2 | 1 | |
Elongation factor TFIIS domain 2 | Zinc beta-ribbon | 2 | 2 | |
Inosine monophosphate dehydrogenase (IMPDH) | Thioesterase/thiol ester dehydrase-isomerase | 2 | 2 | |
Homeodomain-like | RING/U-box | 2 | 2 | |
UBA-like | TPR-like | 2 | 2 | |
ISP transmembrane anchor | ISP domain | 2 | 2 | |
Class I glutamine amidotransferase-like | Metallo-dependent hydrolases | 2 | 1 | |
Heme-dependent catalase-like | Class I glutamine amidotransferase-like | 2 | 1 | |
GAT-like domain | Clathrin adaptor appendage domain | 2 | 2 | |
Carbamoyl phosphate synthetase, large subunit connection domain | Aspartate/ornithine carbamoyltransferase | 2 | 1 | |
Carbamoyl phosphate synthetase, small subunit N-terminal domain | Aspartate/ornithine carbamoyltransferase | 2 | 1 | |
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 2 | 1 | |
Class II aaRS and biotin synthetases | Translation proteins | 2 | 1 | |
Methyl-accepting chemotaxis protein (MCP) signaling domain | Homodimeric domain of signal transducing histidine kinase | 2 | 2 | |
L30e-like | alpha/beta knot | 2 | 1 | |
Oxidoreductase molybdopterin-binding domain | E set domains | 2 | 2 | |
Class I glutamine amidotransferase-like | Carbamoyl phosphate synthetase, large subunit connection domain | 2 | 1 | |
RNA-binding domain, RBD | P-loop containing nucleoside triphosphate hydrolases | 2 | 2 | |
Urease, gamma-subunit | Metallo-dependent hydrolases | 2 | 1 | |
post-HMGL domain-like | Single hybrid motif | 2 | 1 | |
Thioredoxin-like | eEF1-gamma domain | 2 | 1 | |
FMN-linked oxidoreductases | Nucleotide-binding domain | 2 | 2 | |
Insert subdomain of RNA polymerase alpha subunit | RBP11-like subunits of RNA polymerase | 2 | 1 | |
Carbamoyl phosphate synthetase, small subunit N-terminal domain | Carbamoyl phosphate synthetase, large subunit connection domain | 2 | 1 | |
Siroheme synthase middle domains-like | Tetrapyrrole methylase | 2 | 2 | |
Glutathione synthetase ATP-binding domain-like | post-HMGL domain-like | 2 | 1 | |
Methyl-accepting chemotaxis protein (MCP) signaling domain | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 2 | 2 | |
ADC-like | Cdc48 domain 2-like | 2 | 1 | |
PUA domain-like | Ribosomal protein S5 domain 2-like | 2 | 2 | |
Class I glutamine amidotransferase-like | Glutathione synthetase ATP-binding domain-like | 2 | 1 | |
PurM N-terminal domain-like | PurM C-terminal domain-like | 2 | 2 | |
alpha-helical ferredoxin | Nucleotide-binding domain | 2 | 2 | |
Glutathione synthetase ATP-binding domain-like | Aldolase | 2 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Bromodomain | 2 | 1 | |
Urease, beta-subunit | Metallo-dependent hydrolases | 2 | 1 | |
ATP-dependent DNA ligase DNA-binding domain | Nucleic acid-binding proteins | 2 | 2 | |
SAM/Pointed domain | HMG-box | 2 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | SH3-domain | 2 | 1 | |
TPR-like | "Winged helix" DNA-binding domain | 2 | 2 | |
Ribosomal L27 protein-like | Eukaryotic type KH-domain (KH-domain type I) | 2 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | RNase III domain-like | 2 | 1 | |
TPR-like | CAD & PB1 domains | 2 | 1 | |
GroEL apical domain-like | SAICAR synthase-like | 2 | 2 | |
Rudiment single hybrid motif | post-HMGL domain-like | 2 | 1 | |
Carbamoyl phosphate synthetase, small subunit N-terminal domain | Glutathione synthetase ATP-binding domain-like | 2 | 1 | |
Calponin-homology domain, CH-domain | GTPase activation domain, GAP | 2 | 1 | |
Nitrite/Sulfite reductase N-terminal domain-like | Nitrite/Sulfite reductase N-terminal domain-like | 2 | 2 | |
Single hybrid motif | ClpP/crotonase | 2 | 1 | |
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | Translation proteins | 2 | 1 | |
Calponin-homology domain, CH-domain | RGC domain-like | 2 | 1 | |
"Winged helix" DNA-binding domain | RNA-binding domain, RBD | 2 | 1 | |
SH3-domain | CAD & PB1 domains | 2 | 1 | |
PreATP-grasp domain | Aldolase | 2 | 1 | |
Clc chloride channel | CBS-domain pair | 2 | 2 | |
PreATP-grasp domain | post-HMGL domain-like | 2 | 1 | |
Glutathione synthetase ATP-binding domain-like | Metallo-dependent hydrolases | 2 | 1 | |
Inosine monophosphate dehydrogenase (IMPDH) | 4'-phosphopantetheinyl transferase | 2 | 2 | |
Transcription factor IIA (TFIIA), alpha-helical domain | Transcription factor IIA (TFIIA), beta-barrel domain | 2 | 2 | |
TK C-terminal domain-like | Flavoproteins | 2 | 2 | |
Taf5 N-terminal domain-like | WD40 repeat-like | 2 | 2 | |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | FMN-linked oxidoreductases | 2 | 2 | |
Actin depolymerizing proteins | Actin depolymerizing proteins | 2 | 2 | |
Acetyl-CoA synthetase-like | Acetyl-CoA synthetase-like | 2 | 1 | |
FabD/lysophospholipase-like | Inosine monophosphate dehydrogenase (IMPDH) | 2 | 2 | |
PRTase-like | PRTase-like | 2 | 1 | |
Rudiment single hybrid motif | ClpP/crotonase | 2 | 1 | |
Glycoside hydrolase/deacetylase | Galactose mutarotase-like | 2 | 1 | |
L domain-like | Nucleotide cyclase | 2 | 2 | |
Alpha subunit of glutamate synthase, C-terminal domain | Nucleotide-binding domain | 2 | 2 | |
Methyl-accepting chemotaxis protein (MCP) signaling domain | Methyl-accepting chemotaxis protein (MCP) signaling domain | 2 | 2 | |
Dimeric alpha+beta barrel | Dimeric alpha+beta barrel | 2 | 1 | |
Translation proteins | Initiation factor IF2/eIF5b, domain 3 | 2 | 2 | |
Thiamin diphosphate-binding fold (THDP-binding) | Nitrite and sulphite reductase 4Fe-4S domain-like | 2 | 2 | |
Galactose-binding domain-like | Galactose oxidase, central domain | 2 | 2 | |
Retrovirus zinc finger-like domains | RING/U-box | 2 | 2 | |
Families 57/38 glycoside transferase middle domain | Galactose mutarotase-like | 2 | 1 | |
Aminopeptidase/glucanase lid domain | Zn-dependent exopeptidases | 2 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Ras GEF | 2 | 2 | |
CBS-domain pair | Inosine monophosphate dehydrogenase (IMPDH) | 2 | 1 | |
Flavoproteins | Nitrite/Sulfite reductase N-terminal domain-like | 2 | 2 | |
Leukotriene A4 hydrolase N-terminal domain | ARM repeat | 2 | 1 | |
MgtE membrane domain-like | MgtE membrane domain-like | 2 | 2 | |
Tudor/PWWP/MBT | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 2 | 1 | |
Protein kinase-like (PK-like) | WD40 repeat-like | 2 | 2 | |
WD40 repeat-like | DNase I-like | 2 | 2 | |
PYP-like sensor domain (PAS domain) | CheY-like | 2 | 2 | |
TK C-terminal domain-like | Nitrite/Sulfite reductase N-terminal domain-like | 2 | 2 | |
Macro domain-like | Zn-dependent exopeptidases | 2 | 1 | |
Nucleotide cyclase | P-loop containing nucleoside triphosphate hydrolases | 2 | 2 | |
CCCH zinc finger | RNA-binding domain, RBD | 2 | 2 | |
Glycoside hydrolase/deacetylase | Families 57/38 glycoside transferase middle domain | 2 | 1 | |
Translation initiation factor 2 beta, aIF2beta, N-terminal domain | Zinc-binding domain of translation initiation factor 2 beta | 2 | 2 | |
ATP-dependent DNA ligase DNA-binding domain | DNA ligase/mRNA capping enzyme, catalytic domain | 2 | 2 | |
ENTH/VHS domain | RNA-binding domain, RBD | 2 | 2 | |
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | ThrRS/AlaRS common domain | 2 | 1 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | alpha/beta-Hydrolases | 2 | 1 | |
Concanavalin A-like lectins/glucanases | PH domain-like | 2 | 2 | |
Glutathione synthetase ATP-binding domain-like | Phosphoglycerate mutase-like | 2 | 1 | |
Class I glutamine amidotransferase-like | Class II aaRS and biotin synthetases | 2 | 1 | |
Galactose oxidase, central domain | Galactose oxidase, central domain | 2 | 2 | |
Metallo-dependent hydrolases | Aspartate/ornithine carbamoyltransferase | 2 | 1 | |
Carbamoyl phosphate synthetase, small subunit N-terminal domain | Methylglyoxal synthase-like | 2 | 1 | |
Sec63 N-terminal domain-like | Sec63 N-terminal domain-like | 2 | 1 | |
Thiamin diphosphate-binding fold (THDP-binding) | Nitrite/Sulfite reductase N-terminal domain-like | 2 | 2 | |
Carbamoyl phosphate synthetase, large subunit connection domain | Metallo-dependent hydrolases | 2 | 1 | |
PreATP-grasp domain | Metallo-dependent hydrolases | 2 | 1 | |
FYVE/PHD zinc finger | SET domain | 2 | 1 | |
TPR-like | RNI-like | 2 | 2 | |
UBA-like | XPC-binding domain | 2 | 2 | |
Class I glutamine amidotransferase-like | Methylglyoxal synthase-like | 2 | 1 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | EF-hand | 2 | 2 | |
P-loop containing nucleoside triphosphate hydrolases | Initiation factor IF2/eIF5b, domain 3 | 2 | 2 | |
Spectrin repeat | Spectrin repeat | 2 | 2 | |
Bet v1-like | Bet v1-like | 2 | 1 | |
Calponin-homology domain, CH-domain | Spectrin repeat | 2 | 2 | |
Urease, beta-subunit | Composite domain of metallo-dependent hydrolases | 2 | 1 | |
BEACH domain | WD40 repeat-like | 2 | 2 | |
Methylglyoxal synthase-like | Metallo-dependent hydrolases | 2 | 1 | |
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | L30e-like | 2 | 2 | |
Nucleotide cyclase | Nucleotide cyclase | 2 | 2 | |
Fe,Mn superoxide dismutase (SOD), N-terminal domain | Fe,Mn superoxide dismutase (SOD), C-terminal domain | 2 | 1 | |
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 2 | 1 | |
Aldolase | post-HMGL domain-like | 2 | 1 | |
Glucocorticoid receptor-like (DNA-binding domain) | GTPase activation domain, GAP | 2 | 2 | |
Glucocorticoid receptor-like (DNA-binding domain) | AN1-like Zinc finger | 2 | 1 | |
Glutathione synthetase ATP-binding domain-like | Succinyl-CoA synthetase domains | 2 | 2 | |
SMAD/FHA domain | Protein kinase-like (PK-like) | 2 | 2 | |
Periplasmic binding protein-like II | GlnB-like | 2 | 1 | |
Metalloproteases ("zincins"), catalytic domain | ARM repeat | 2 | 1 | |
Chondroitin AC/alginate lyase | Galactose mutarotase-like | 2 | 1 | |
PriA/YqbF domain | GINS helical bundle-like | 2 | 2 | |
PreATP-grasp domain | Aspartate/ornithine carbamoyltransferase | 2 | 1 | |
NAD(P)-binding Rossmann-fold domains | Thiolase-like | 2 | 2 | |
Rudiment single hybrid motif | Aldolase | 2 | 1 | |
vWA-like | SPOC domain-like | 2 | 2 | |
RNase III domain-like | RNase III domain-like | 2 | 1 | |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | Alpha subunit of glutamate synthase, C-terminal domain | 2 | 2 | |
SH3-domain | PX domain | 2 | 1 | |
Cyclophilin-like | RNA-binding domain, RBD | 2 | 2 | |
Purple acid phosphatase, N-terminal domain | Metallo-dependent phosphatases | 2 | 2 | |
Multidrug efflux transporter AcrB transmembrane domain | WD40 repeat-like | 2 | 2 | |
Bromodomain | Protein kinase-like (PK-like) | 2 | 2 | |
Activator of Hsp90 ATPase, Aha1 | Bet v1-like | 2 | 1 | |
Nucleic acid-binding proteins | Eukaryotic type KH-domain (KH-domain type I) | 2 | 1 | |
FAD/NAD(P)-binding domain | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 2 | 1 | |
Glutathione synthetase ATP-binding domain-like | ClpP/crotonase | 2 | 1 | |
Ubiquitin-like | XPC-binding domain | 2 | 2 | |
Phosphofructokinase | Phosphofructokinase | 2 | 1 | |
UBC-like | Endosomal sorting complex assembly domain | 2 | 1 | |
(Trans)glycosidases | Carbohydrate binding domain | 2 | 2 | |
Glycerol-3-phosphate (1)-acyltransferase | Glycerol-3-phosphate (1)-acyltransferase | 2 | 1 | |
Cdc48 domain 2-like | P-loop containing nucleoside triphosphate hydrolases | 2 | 1 | |
Sec7 domain | ARM repeat | 2 | 2 | |
Metallo-dependent phosphatases | 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain | 2 | 1 | |
WD40 repeat-like | Cysteine proteinases | 2 | 2 | |
NAD(P)-binding Rossmann-fold domains | 4'-phosphopantetheinyl transferase | 2 | 2 | |
Galactose oxidase, central domain | E set domains | 2 | 1 | |
FabD/lysophospholipase-like | Thiolase-like | 2 | 2 | |
Formate/glycerate dehydrogenase catalytic domain-like | ACT-like | 2 | 1 | |
Acyl-CoA N-acyltransferases (Nat) | Acyl-CoA N-acyltransferases (Nat) | 2 | 2 | |
RING/U-box | DUSP-like | 2 | 2 | |
Carbamoyl phosphate synthetase, small subunit N-terminal domain | PreATP-grasp domain | 2 | 1 | |
Class II aaRS and biotin synthetases | Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | 2 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Homeodomain-like | 2 | 2 | |
Inosine monophosphate dehydrogenase (IMPDH) | Thiolase-like | 2 | 2 | |
Glutamine synthetase, N-terminal domain | Glutamine synthetase/guanido kinase | 2 | 1 | |
Nitrite and sulphite reductase 4Fe-4S domain-like | Nitrite and sulphite reductase 4Fe-4S domain-like | 2 | 2 | |
Galactose-binding domain-like | Kelch motif | 2 | 2 | |
L domain-like | NTF2-like | 2 | 1 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | Hect, E3 ligase catalytic domain | 2 | 1 | |
Inosine monophosphate dehydrogenase (IMPDH) | NAD(P)-binding Rossmann-fold domains | 2 | 2 | |
ADC-like | P-loop containing nucleoside triphosphate hydrolases | 2 | 1 | |
Thiamin diphosphate-binding fold (THDP-binding) | Flavoproteins | 2 | 2 | |
Class I glutamine amidotransferase-like | Aspartate/ornithine carbamoyltransferase | 2 | 1 | |
UBA-like | Cysteine proteinases | 2 | 2 | |
PX domain | Phospholipase D/nuclease | 2 | 2 | |
"Winged helix" DNA-binding domain | E set domains | 2 | 1 | |
Periplasmic binding protein-like II | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | 2 | 1 | |
Zn2/Cys6 DNA-binding domain | Zn2/Cys6 DNA-binding domain | 2 | 2 | |
NAD(P)-binding Rossmann-fold domains | Siroheme synthase middle domains-like | 2 | 2 | |
DBL homology domain (DH-domain) | SH3-domain | 2 | 2 | |
Restriction endonuclease-like | RuvA domain 2-like | 2 | 2 | |
Actin depolymerizing proteins | PH domain-like | 2 | 1 | |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | PRTase-like | 2 | 1 | |
NAD(P)-binding Rossmann-fold domains | ACT-like | 2 | 1 | |
ENTH/VHS domain | Clathrin adaptor appendage domain | 2 | 2 | |
Urease, gamma-subunit | Urease, beta-subunit | 2 | 1 | |
Nucleotidylyl transferase | Ribosomal protein L25-like | 2 | 2 | |
Acyl-CoA N-acyltransferases (Nat) | Bromodomain | 2 | 2 | |
FYVE/PHD zinc finger | Bromodomain | 2 | 2 | |
MIT domain | P-loop containing nucleoside triphosphate hydrolases | 2 | 1 | |
FMN-linked oxidoreductases | alpha-helical ferredoxin | 2 | 2 | |
PreATP-grasp domain | ClpP/crotonase | 2 | 1 | |
Class I glutamine amidotransferase-like | PreATP-grasp domain | 2 | 1 | |
Methylglyoxal synthase-like | Aspartate/ornithine carbamoyltransferase | 2 | 1 | |
LysM domain | LysM domain | 2 | 1 | |
Subtilisin-like | Galactose-binding domain-like | 2 | 2 | |
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain | Nucleotidylyl transferase | 2 | 1 | |
L domain-like | PP2C-like | 2 | 2 | |
P-loop containing nucleoside triphosphate hydrolases | Class I glutamine amidotransferase-like | 2 | 1 | |
Carbamoyl phosphate synthetase, small subunit N-terminal domain | Metallo-dependent hydrolases | 2 | 1 | |
Composite domain of metallo-dependent hydrolases | Composite domain of metallo-dependent hydrolases | 2 | 1 | |
HAD-like | BRCT domain | 2 | 2 | |
PreATP-grasp domain | N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) | 1 | 1 | |
F1F0 ATP synthase subunit C | F1F0 ATP synthase subunit C | 1 | 1 | |
DBL homology domain (DH-domain) | BAR/IMD domain-like | 1 | 1 | |
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment | DNA breaking-rejoining enzymes | 1 | 1 | |
XPC-binding domain | Acid proteases | 1 | 1 | |
HAD-like | S13-like H2TH domain | 1 | 1 | |
beta-sandwich domain of Sec23/24 | EF-hand | 1 | 1 | |
WW domain | FF domain | 1 | 1 | |
Cysteine-rich domain | GTPase activation domain, GAP | 1 | 1 | |
Calponin-homology domain, CH-domain | CAD & PB1 domains | 1 | 1 | |
RuvA domain 2-like | Nucleic acid-binding proteins | 1 | 1 | |
Pseudouridine synthase | PUA domain-like | 1 | 1 | |
Hypothetical protein c14orf129, hspc210 | TPR-like | 1 | 1 | |
Concanavalin A-like lectins/glucanases | P-domain of calnexin/calreticulin | 1 | 1 | |
UDP-Glycosyltransferase/glycogen phosphorylase | UDP-Glycosyltransferase/glycogen phosphorylase | 1 | 1 | |
Chromo domain-like | RING/U-box | 1 | 1 | |
S15/NS1 RNA-binding domain | Class II aaRS and biotin synthetases | 1 | 1 | |
Clathrin heavy-chain terminal domain | ARM repeat | 1 | 1 | |
Nucleotide-diphospho-sugar transferases | Nucleotide-diphospho-sugar transferases | 1 | 1 | |
Double Clp-N motif | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
Tudor/PWWP/MBT | Chromo domain-like | 1 | 1 | |
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | Zinc beta-ribbon | 1 | 1 | |
Tricorn protease domain 2 | DPP6 N-terminal domain-like | 1 | 1 | |
mRNA decapping enzyme DcpS N-terminal domain | HIT-like | 1 | 1 | |
vWA-like | C-terminal domain of Ku80 | 1 | 1 | |
HAND domain of the nucleosome remodeling ATPase ISWI | Homeodomain-like | 1 | 1 | |
ARM repeat | Concanavalin A-like lectins/glucanases | 1 | 1 | |
UBA-like | Thioredoxin-like | 1 | 1 | |
Actin depolymerizing proteins | SH3-domain | 1 | 1 | |
PH domain-like | BSD domain-like | 1 | 1 | |
Ran binding protein zinc finger-like | "Winged helix" DNA-binding domain | 1 | 1 | |
PurM N-terminal domain-like | PurM N-terminal domain-like | 1 | 1 | |
Oxidoreductase molybdopterin-binding domain | Cytochrome b5-like heme/steroid binding domain | 1 | 1 | |
S-adenosyl-L-methionine-dependent methyltransferases | Putative methyltransferase TM0872, insert domain | 1 | 1 | |
4'-phosphopantetheinyl transferase | 4'-phosphopantetheinyl transferase | 1 | 1 | |
TPR-like | HIT/MYND zinc finger-like | 1 | 1 | |
beta-beta-alpha zinc fingers | S-adenosyl-L-methionine-dependent methyltransferases | 1 | 1 | |
Chaperone J-domain | HSC20 (HSCB), C-terminal oligomerisation domain | 1 | 1 | |
S-adenosylmethionine synthetase | S-adenosylmethionine synthetase | 1 | 1 | |
Succinyl-CoA synthetase domains | Citrate synthase | 1 | 1 | |
Ribosomal protein L7/12, oligomerisation (N-terminal) domain | ClpS-like | 1 | 1 | |
Dehydroquinate synthase-like | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
BRCT domain | PsbU/PolX domain-like | 1 | 1 | |
Rudiment single hybrid motif | PurM C-terminal domain-like | 1 | 1 | |
alpha/beta-Hydrolases | R3H domain | 1 | 1 | |
FLJ32549 domain-like | FLJ32549 C-terminal domain-like | 1 | 1 | |
PIN domain-like | Nucleic acid-binding proteins | 1 | 1 | |
Chaperone J-domain | beta-beta-alpha zinc fingers | 1 | 1 | |
PUG domain-like | Cysteine proteinases | 1 | 1 | |
E set domains | Ferredoxin reductase-like, C-terminal NADP-linked domain | 1 | 1 | |
Flavoproteins | Radical SAM enzymes | 1 | 1 | |
PYP-like sensor domain (PAS domain) | Protein kinase-like (PK-like) | 1 | 1 | |
PX domain | SNARE fusion complex | 1 | 1 | |
CoA-transferase family III (CaiB/BaiF) | CoA-transferase family III (CaiB/BaiF) | 1 | 1 | |
Cryptochrome/photolyase, N-terminal domain | Cryptochrome/photolyase FAD-binding domain | 1 | 1 | |
ARM repeat | "Winged helix" DNA-binding domain | 1 | 1 | |
WD40 repeat-like | Cyclophilin-like | 1 | 1 | |
BRCA2 helical domain | Nucleic acid-binding proteins | 1 | 1 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | GTPase activation domain, GAP | 1 | 1 | |
Chaperone J-domain | E set domains | 1 | 1 | |
SWIB/MDM2 domain | eIF1-like | 1 | 1 | |
Glutathione synthetase ATP-binding domain-like | PurM N-terminal domain-like | 1 | 1 | |
Homocysteine S-methyltransferase | Cobalamin (vitamin B12)-binding domain | 1 | 1 | |
Nqo1 FMN-binding domain-like | Nqo1 middle domain-like | 1 | 1 | |
Aldolase | NAD(P)-binding Rossmann-fold domains | 1 | 1 | |
EPT/RTPC-like | NAD(P)-binding Rossmann-fold domains | 1 | 1 | |
PYP-like sensor domain (PAS domain) | Homodimeric domain of signal transducing histidine kinase | 1 | 1 | |
CoA-dependent acyltransferases | ACP-like | 1 | 1 | |
FF domain | FF domain | 1 | 1 | |
RuvA domain 2-like | SH2 domain | 1 | 1 | |
PreATP-grasp domain | PurM N-terminal domain-like | 1 | 1 | |
eIF2alpha middle domain-like | eIF-2-alpha, C-terminal domain | 1 | 1 | |
Ubiquitin-like | Ran binding protein zinc finger-like | 1 | 1 | |
F-box domain | EF-hand | 1 | 1 | |
PurM N-terminal domain-like | Class I glutamine amidotransferase-like | 1 | 1 | |
HIT-like | HIT-like | 1 | 1 | |
L9 N-domain-like | Ribosomal protein L9 C-domain | 1 | 1 | |
His-Me finger endonucleases | AN1-like Zinc finger | 1 | 1 | |
EF-hand | SH3-domain | 1 | 1 | |
BAR/IMD domain-like | "Winged helix" DNA-binding domain | 1 | 1 | |
Chaperone J-domain | Sec63 N-terminal domain-like | 1 | 1 | |
Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | 1 | 1 | |
Molybdenum cofactor biosynthesis proteins | Molybdenum cofactor biosynthesis proteins | 1 | 1 | |
Tex N-terminal region-like | SH2 domain | 1 | 1 | |
DNA/RNA polymerases | DNA/RNA polymerases | 1 | 1 | |
DNase I-like | GTPase activation domain, GAP | 1 | 1 | |
SpoIIaa-like | cAMP-binding domain-like | 1 | 1 | |
Calponin-homology domain, CH-domain | DBL homology domain (DH-domain) | 1 | 1 | |
FabD/lysophospholipase-like | Probable ACP-binding domain of malonyl-CoA ACP transacylase | 1 | 1 | |
Nucleic acid-binding proteins | BRCT domain | 1 | 1 | |
PurS-like | FGAM synthase PurL, linker domain | 1 | 1 | |
Pseudouridine synthase | S-adenosyl-L-methionine-dependent methyltransferases | 1 | 1 | |
TPR-like | F-box domain | 1 | 1 | |
Class I glutamine amidotransferase-like | Adenine nucleotide alpha hydrolases-like | 1 | 1 | |
ARID-like | FYVE/PHD zinc finger | 1 | 1 | |
Peptidase/esterase 'gauge' domain | alpha/beta-Hydrolases | 1 | 1 | |
PLP-binding barrel | Alanine racemase C-terminal domain-like | 1 | 1 | |
DHS-like NAD/FAD-binding domain | Clavaminate synthase-like | 1 | 1 | |
Nitrite and sulphite reductase 4Fe-4S domain-like | ISP domain | 1 | 1 | |
Metallo-dependent hydrolases | Metallo-dependent hydrolases | 1 | 1 | |
S-adenosyl-L-methionine-dependent methyltransferases | Formin homology 2 domain (FH2 domain) | 1 | 1 | |
FAD-linked reductases, C-terminal domain | Thioredoxin-like | 1 | 1 | |
Aldolase | Aminoacid dehydrogenase-like, N-terminal domain | 1 | 1 | |
SAM/Pointed domain | Ubiquitin-like | 1 | 1 | |
RING/U-box | BRCT domain | 1 | 1 | |
PX domain | GTPase activation domain, GAP | 1 | 1 | |
Cytochrome b5-like heme/steroid binding domain | FMN-linked oxidoreductases | 1 | 1 | |
BEACH domain | ARM repeat | 1 | 1 | |
AN1-like Zinc finger | AN1-like Zinc finger | 1 | 1 | |
FAD/NAD(P)-binding domain | Thioredoxin-like | 1 | 1 | |
TGS-like | ThrRS/AlaRS common domain | 1 | 1 | |
BAR/IMD domain-like | Ankyrin repeat | 1 | 1 | |
Ribosomal protein S5 domain 2-like | Ribosomal protein S5 domain 2-like | 1 | 1 | |
PH domain-like | BEACH domain | 1 | 1 | |
Tetrahydrobiopterin biosynthesis enzymes-like | 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK | 1 | 1 | |
ARM repeat | Chromo domain-like | 1 | 1 | |
RmlC-like cupins | Zn-dependent exopeptidases | 1 | 1 | |
Staphylococcal nuclease | Staphylococcal nuclease | 1 | 1 | |
(Trans)glycosidases | Acyl-CoA N-acyltransferases (Nat) | 1 | 1 | |
RNA-binding domain, RBD | DPP6 N-terminal domain-like | 1 | 1 | |
Ribonuclease H-like | RNA-binding domain, RBD | 1 | 1 | |
PRP4-like | WD40 repeat-like | 1 | 1 | |
dsRNA-binding domain-like | UBA-like | 1 | 1 | |
Glutaminase/Asparaginase | Ankyrin repeat | 1 | 1 | |
Oxidoreductase molybdopterin-binding domain | Ferredoxin reductase-like, C-terminal NADP-linked domain | 1 | 1 | |
PUA domain-like | SWIB/MDM2 domain | 1 | 1 | |
FAD/NAD(P)-binding domain | EF-hand | 1 | 1 | |
Ribosomal protein S5 domain 2-like | Type II DNA topoisomerase | 1 | 1 | |
Nucleotidylyl transferase | Alpha-L RNA-binding motif | 1 | 1 | |
FAD/NAD(P)-binding domain | ISP domain | 1 | 1 | |
WD40 repeat-like | C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 1 | 1 | |
Dehydroquinate synthase-like | Aminoacid dehydrogenase-like, N-terminal domain | 1 | 1 | |
RING/U-box | Tricorn protease domain 2 | 1 | 1 | |
CoA-dependent acyltransferases | NAD(P)-binding Rossmann-fold domains | 1 | 1 | |
ARM repeat | Rap/Ran-GAP | 1 | 1 | |
PLP-dependent transferases | PLP-dependent transferases | 1 | 1 | |
UBA-like | Elongation factor Ts (EF-Ts), dimerisation domain | 1 | 1 | |
ARM repeat | Hect, E3 ligase catalytic domain | 1 | 1 | |
Methionyl-tRNA synthetase (MetRS), Zn-domain | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 1 | 1 | |
DEK C-terminal domain | SWIB/MDM2 domain | 1 | 1 | |
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit | cAMP-binding domain-like | 1 | 1 | |
dsRNA-binding domain-like | UBC-like | 1 | 1 | |
UBA-like | UBC-like | 1 | 1 | |
Zinc beta-ribbon | Zinc beta-ribbon | 1 | 1 | |
E set domains | Riboflavin synthase domain-like | 1 | 1 | |
Homocysteine S-methyltransferase | Methionine synthase domain | 1 | 1 | |
Quinoprotein alcohol dehydrogenase-like | Bromodomain | 1 | 1 | |
Aldolase | 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain | 1 | 1 | |
Eukaryotic RPB5 N-terminal domain | RPB5-like RNA polymerase subunit | 1 | 1 | |
Chromo domain-like | S-adenosyl-L-methionine-dependent methyltransferases | 1 | 1 | |
HAMP domain-like | CheY-like | 1 | 1 | |
CHY zinc finger-like | RING/U-box | 1 | 1 | |
Methyl-accepting chemotaxis protein (MCP) signaling domain | HAMP domain-like | 1 | 1 | |
ARM repeat | RING/U-box | 1 | 1 | |
Methylglyoxal synthase-like | Cytidine deaminase-like | 1 | 1 | |
VPS9 domain | Ankyrin repeat | 1 | 1 | |
PurS-like | PurM N-terminal domain-like | 1 | 1 | |
BRCT domain | Nucleotidyltransferase | 1 | 1 | |
Inhibitor of apoptosis (IAP) repeat | Inhibitor of apoptosis (IAP) repeat | 1 | 1 | |
FYVE/PHD zinc finger | ARM repeat | 1 | 1 | |
Ubiquitin-like | PP2C-like | 1 | 1 | |
Cysteine proteinases | Cysteine proteinases | 1 | 1 | |
E set domains | (Trans)glycosidases | 1 | 1 | |
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain | Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 1 | 1 | |
WGR domain-like | ADP-ribosylation | 1 | 1 | |
Heat shock protein 70kD (HSP70), C-terminal subdomain | Heat shock protein 70kD (HSP70), C-terminal subdomain | 1 | 1 | |
HAMP domain-like | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 1 | 1 | |
2Fe-2S ferredoxin-like | 4Fe-4S ferredoxins | 1 | 1 | |
Cytochrome P450 | Riboflavin synthase domain-like | 1 | 1 | |
Glucocorticoid receptor-like (DNA-binding domain) | S-adenosyl-L-methionine-dependent methyltransferases | 1 | 1 | |
6-phosphogluconate dehydrogenase C-terminal domain-like | 6-phosphogluconate dehydrogenase C-terminal domain-like | 1 | 1 | |
DNA-glycosylase | Nudix | 1 | 1 | |
PurM C-terminal domain-like | PurM C-terminal domain-like | 1 | 1 | |
GroEL apical domain-like | GroEL apical domain-like | 1 | 1 | |
Chromo domain-like | Homeodomain-like | 1 | 1 | |
Thiamin phosphate synthase | Ribokinase-like | 1 | 1 | |
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK | Dihydropteroate synthetase-like | 1 | 1 | |
Ubiquitin-like | PH domain-like | 1 | 1 | |
PH domain-like | C2 domain (Calcium/lipid-binding domain, CaLB) | 1 | 1 | |
SH3-domain | GAT-like domain | 1 | 1 | |
EF-hand | UBA-like | 1 | 1 | |
Thioredoxin-like | ERP29 C domain-like | 1 | 1 | |
PH domain-like | WD40 repeat-like | 1 | 1 | |
Chitinase insertion domain | Carbohydrate binding domain | 1 | 1 | |
Protease propeptides/inhibitors | Subtilisin-like | 1 | 1 | |
F-box domain | RING/U-box | 1 | 1 | |
SNARE fusion complex | SNARE fusion complex | 1 | 1 | |
PheT/TilS domain | Class II aaRS and biotin synthetases | 1 | 1 | |
VPS9 domain | F-box domain | 1 | 1 | |
DNA primase core | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
HCP-like | HIT/MYND zinc finger-like | 1 | 1 | |
ENTH/VHS domain | I/LWEQ domain | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Retrovirus zinc finger-like domains | 1 | 1 | |
Thioredoxin-like | Six-hairpin glycosidases | 1 | 1 | |
Putative DNA-binding domain | Putative DNA-binding domain | 1 | 1 | |
Nucleotidylyl transferase | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
Nudix | CCCH zinc finger | 1 | 1 | |
ARM repeat | beta-beta-alpha zinc fingers | 1 | 1 | |
"Winged helix" DNA-binding domain | E2F-DP heterodimerization region | 1 | 1 | |
Folate-binding domain | Aminomethyltransferase beta-barrel domain | 1 | 1 | |
Adenine nucleotide alpha hydrolases-like | GMP synthetase C-terminal dimerisation domain | 1 | 1 | |
Bromodomain | Tudor/PWWP/MBT | 1 | 1 | |
Amine oxidase N-terminal region | Amine oxidase N-terminal region | 1 | 1 | |
Glutathione synthetase ATP-binding domain-like | Citrate synthase | 1 | 1 | |
Chromo domain-like | Arginase/deacetylase | 1 | 1 | |
Cysteine proteinases | Calpain large subunit, middle domain (domain III) | 1 | 1 | |
S15/NS1 RNA-binding domain | Class II aaRS ABD-related | 1 | 1 | |
Ankyrin repeat | RCC1/BLIP-II | 1 | 1 | |
Ankyrin repeat | Domain of poly(ADP-ribose) polymerase | 1 | 1 | |
Protein kinase-like (PK-like) | Protein kinase-like (PK-like) | 1 | 1 | |
VPS9 domain | UBA-like | 1 | 1 | |
MOSC N-terminal domain-like | PK beta-barrel domain-like | 1 | 1 | |
VPS9 domain | PX domain | 1 | 1 | |
FYSH domain | Hypothetical protein AF0491, middle domain | 1 | 1 | |
Cobalamin (vitamin B12)-binding domain | Methionine synthase activation domain-like | 1 | 1 | |
Ankyrin repeat | ADP-ribosylation | 1 | 1 | |
UBC-like | Protein kinase-like (PK-like) | 1 | 1 | |
Zinc hairpin stack | RING/U-box | 1 | 1 | |
Cysteine-rich domain | SH3-domain | 1 | 1 | |
Leukotriene A4 hydrolase N-terminal domain | Bromodomain | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Cytidine deaminase-like | 1 | 1 | |
PH domain-like | Cullin repeat-like | 1 | 1 | |
BAR/IMD domain-like | Cysteine-rich domain | 1 | 1 | |
BSD domain-like | BSD domain-like | 1 | 1 | |
FAD/NAD(P)-binding domain | Nitrite/Sulfite reductase N-terminal domain-like | 1 | 1 | |
SAP domain | Ribonuclease H-like | 1 | 1 | |
beta-sandwich domain of Sec23/24 | Leucine zipper domain | 1 | 1 | |
HAMP domain-like | Homodimeric domain of signal transducing histidine kinase | 1 | 1 | |
PurS-like | Class I glutamine amidotransferase-like | 1 | 1 | |
FGAM synthase PurL, linker domain | Class I glutamine amidotransferase-like | 1 | 1 | |
Rudiment single hybrid motif | N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) | 1 | 1 | |
(Trans)glycosidases | Galactose-binding domain-like | 1 | 1 | |
WD40 repeat-like | Bacterial exopeptidase dimerisation domain | 1 | 1 | |
Voltage-gated potassium channels | EF-hand | 1 | 1 | |
Tetrahydrobiopterin biosynthesis enzymes-like | Tetrahydrobiopterin biosynthesis enzymes-like | 1 | 1 | |
POZ domain | Skp1 dimerisation domain-like | 1 | 1 | |
Retrovirus zinc finger-like domains | Acid proteases | 1 | 1 | |
DNA clamp | DNA clamp | 1 | 1 | |
Ribonuclease H-like | Ran binding protein zinc finger-like | 1 | 1 | |
Carbamate kinase-like | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 1 | 1 | |
DNase I-like | RING/U-box | 1 | 1 | |
Rap30/74 interaction domains | "Winged helix" DNA-binding domain | 1 | 1 | |
Nucleotidylyl transferase | An anticodon-binding domain of class I aminoacyl-tRNA synthetases | 1 | 1 | |
WD40 repeat-like | Calcium-dependent phosphotriesterase | 1 | 1 | |
Concanavalin A-like lectins/glucanases | WD40 repeat-like | 1 | 1 | |
Glutathione synthetase ATP-binding domain-like | PurM C-terminal domain-like | 1 | 1 | |
Ribulose-phoshate binding barrel | Ribulose-phoshate binding barrel | 1 | 1 | |
Surp module (SWAP domain) | Ubiquitin-like | 1 | 1 | |
alpha/beta-Hydrolases | PH domain-like | 1 | 1 | |
Rhodanese/Cell cycle control phosphatase | Rhodanese/Cell cycle control phosphatase | 1 | 1 | |
Surp module (SWAP domain) | Surp module (SWAP domain) | 1 | 1 | |
Bromodomain | Ankyrin repeat | 1 | 1 | |
Nqo1 middle domain-like | Nqo1C-terminal domain-like | 1 | 1 | |
POZ domain | Cap-Gly domain | 1 | 1 | |
Ankyrin repeat | PX domain | 1 | 1 | |
UBC-like | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
BRCT domain | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
Radical SAM enzymes | Molybdenum cofactor biosynthesis protein C, MoaC | 1 | 1 | |
F-box domain | F-box domain | 1 | 1 | |
DNase I-like | FYVE/PHD zinc finger | 1 | 1 | |
PYP-like sensor domain (PAS domain) | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 1 | 1 | |
E set domains | Cytochrome b5-like heme/steroid binding domain | 1 | 1 | |
HSP20-like chaperones | HCP-like | 1 | 1 | |
Ankyrin repeat | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
CCCH zinc finger | ARM repeat | 1 | 1 | |
FYVE/PHD zinc finger | SAICAR synthase-like | 1 | 1 | |
RCC1/BLIP-II | POZ domain | 1 | 1 | |
DNA polymerase beta, N-terminal domain-like | Restriction endonuclease-like | 1 | 1 | |
N-terminal domain of adenylylcyclase associated protein, CAP | C-terminal domain of adenylylcyclase associated protein | 1 | 1 | |
PH domain-like | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain | 1 | 1 | |
SMAD/FHA domain | PX domain | 1 | 1 | |
Carbamate kinase-like | NAD(P)-binding Rossmann-fold domains | 1 | 1 | |
PurS-like | PurM C-terminal domain-like | 1 | 1 | |
ENTH/VHS domain | SH3-domain | 1 | 1 | |
Spectrin repeat | EF-hand | 1 | 1 | |
ThrRS/AlaRS common domain | Class II aaRS ABD-related | 1 | 1 | |
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | Protein kinase-like (PK-like) | 1 | 1 | |
UBA-like | RNI-like | 1 | 1 | |
Nucleic acid-binding proteins | eIF-2-alpha, C-terminal domain | 1 | 1 | |
Tudor/PWWP/MBT | Glucocorticoid receptor-like (DNA-binding domain) | 1 | 1 | |
2Fe-2S ferredoxin-like | Formate dehydrogenase/DMSO reductase, domains 1-3 | 1 | 1 | |
cAMP-binding domain-like | FabD/lysophospholipase-like | 1 | 1 | |
R3H domain | Ribonuclease H-like | 1 | 1 | |
GAT-like domain | I/LWEQ domain | 1 | 1 | |
YbiA-like | PAH2 domain | 1 | 1 | |
Trimeric LpxA-like enzymes | ARM repeat | 1 | 1 | |
E set domains | AMPKBI-like | 1 | 1 | |
Cellulose-binding domain | Barwin-like endoglucanases | 1 | 1 | |
NagB/RpiA/CoA transferase-like | NagB/RpiA/CoA transferase-like | 1 | 1 | |
Concanavalin A-like lectins/glucanases | BEACH domain | 1 | 1 | |
Molybdenum cofactor biosynthesis proteins | MoeA C-terminal domain-like | 1 | 1 | |
HisI-like | all-alpha NTP pyrophosphatases | 1 | 1 | |
Sm-like ribonucleoproteins | YjeF N-terminal domain-like | 1 | 1 | |
Multidrug efflux transporter AcrB transmembrane domain | Multidrug efflux transporter AcrB transmembrane domain | 1 | 1 | |
Methionine synthase domain | Methionine synthase activation domain-like | 1 | 1 | |
Ankyrin repeat | WGR domain-like | 1 | 1 | |
Cytochrome P450 | Flavoproteins | 1 | 1 | |
EPT/RTPC-like | Aldolase | 1 | 1 | |
BRCT domain | post-AAA+ oligomerization domain-like | 1 | 1 | |
Activating enzymes of the ubiquitin-like proteins | Activating enzymes of the ubiquitin-like proteins | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | HAND domain of the nucleosome remodeling ATPase ISWI | 1 | 1 | |
alpha/beta knot | Nucleic acid-binding proteins | 1 | 1 | |
Dehydroquinate synthase-like | Aldolase | 1 | 1 | |
S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | 1 | 1 | |
Protein kinase-like (PK-like) | Class II aaRS ABD-related | 1 | 1 | |
Protein kinase-like (PK-like) | Class II aaRS and biotin synthetases | 1 | 1 | |
Ribokinase-like | Heme oxygenase-like | 1 | 1 | |
WD40 repeat-like | Zn-dependent exopeptidases | 1 | 1 | |
Acyl-CoA binding protein | Ankyrin repeat | 1 | 1 | |
FGAM synthase PurL, linker domain | PurM C-terminal domain-like | 1 | 1 | |
Ran binding protein zinc finger-like | Ran binding protein zinc finger-like | 1 | 1 | |
Beta-D-glucan exohydrolase, C-terminal domain | Acyl-CoA N-acyltransferases (Nat) | 1 | 1 | |
PreATP-grasp domain | PurM C-terminal domain-like | 1 | 1 | |
Cytochrome b5-like heme/steroid binding domain | Riboflavin synthase domain-like | 1 | 1 | |
WD40 repeat-like | Bromodomain | 1 | 1 | |
Methionine synthase domain | Cobalamin (vitamin B12)-binding domain | 1 | 1 | |
Acid proteases | UBA-like | 1 | 1 | |
Terpenoid cyclases/Protein prenyltransferases | Terpenoid cyclases/Protein prenyltransferases | 1 | 1 | |
Dom34/Pelota N-terminal domain-like | L30e-like | 1 | 1 | |
Translation proteins | Translation proteins | 1 | 1 | |
Nucleic acid-binding proteins | "Winged helix" DNA-binding domain | 1 | 1 | |
C2 domain (Calcium/lipid-binding domain, CaLB) | Carbohydrate binding domain | 1 | 1 | |
TGS-like | Class II aaRS and biotin synthetases | 1 | 1 | |
Ubiquitin-like | Nucleotide cyclase | 1 | 1 | |
PsbU/PolX domain-like | Nucleotidyltransferase | 1 | 1 | |
Pre-PUA domain | PUA domain-like | 1 | 1 | |
Ribonuclease H-like | Ribonuclease H-like | 1 | 1 | |
DHS-like NAD/FAD-binding domain | FYVE/PHD zinc finger | 1 | 1 | |
GST C-terminal domain-like | Nucleotidylyl transferase | 1 | 1 | |
BRCT domain | DNA/RNA polymerases | 1 | 1 | |
beta-sandwich domain of Sec23/24 | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
cAMP-binding domain-like | RNI-like | 1 | 1 | |
CoA-dependent acyltransferases | Acetyl-CoA synthetase-like | 1 | 1 | |
3-carboxy-cis,cis-mucoante lactonizing enzyme | SH3-domain | 1 | 1 | |
Protein kinase-like (PK-like) | Ypt/Rab-GAP domain of gyp1p | 1 | 1 | |
UBA-like | C2 domain (Calcium/lipid-binding domain, CaLB) | 1 | 1 | |
Surp module (SWAP domain) | ENTH/VHS domain | 1 | 1 | |
Protein kinase-like (PK-like) | Rhodanese/Cell cycle control phosphatase | 1 | 1 | |
NTF2-like | RNA-binding domain, RBD | 1 | 1 | |
DNA polymerase beta, N-terminal domain-like | PsbU/PolX domain-like | 1 | 1 | |
FGAM synthase PurL, linker domain | PurM N-terminal domain-like | 1 | 1 | |
FKBP-like | TPR-like | 1 | 1 | |
Cyclophilin-like | TPR-like | 1 | 1 | |
PAH2 domain | ARM repeat | 1 | 1 | |
Ribonuclease H-like | SH2 domain | 1 | 1 | |
TPR-like | Metallo-dependent phosphatases | 1 | 1 | |
Nqo1 FMN-binding domain-like | Nqo1C-terminal domain-like | 1 | 1 | |
p53-like transcription factors | p53-like transcription factors | 1 | 1 | |
Ubiquitin-like | L domain-like | 1 | 1 | |
Chromo domain-like | Glucocorticoid receptor-like (DNA-binding domain) | 1 | 1 | |
Riboflavin synthase domain-like | Riboflavin synthase domain-like | 1 | 1 | |
Class I glutamine amidotransferase-like | GMP synthetase C-terminal dimerisation domain | 1 | 1 | |
MIR domain | IP3 receptor type 1 binding core, domain 2 | 1 | 1 | |
ARID-like | ARM repeat | 1 | 1 | |
PUA domain-like | eIF1-like | 1 | 1 | |
HisI-like | ALDH-like | 1 | 1 | |
TGS-like | Class II aaRS ABD-related | 1 | 1 | |
Galactose oxidase, central domain | 3-carboxy-cis,cis-mucoante lactonizing enzyme | 1 | 1 | |
F-box domain | L domain-like | 1 | 1 | |
Putative DNA-binding domain | PheT/TilS domain | 1 | 1 | |
dsRNA-binding domain-like | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
Class II aaRS and biotin synthetases | C-terminal domain of ProRS | 1 | 1 | |
Cysteine proteinases | F-box domain | 1 | 1 | |
Nucleotidyltransferase | Poly A polymerase C-terminal region-like | 1 | 1 | |
ENTH/VHS domain | FYVE/PHD zinc finger | 1 | 1 | |
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | Elongation factor TFIIS domain 2 | 1 | 1 | |
RNA-binding domain, RBD | beta-sandwich domain of Sec23/24 | 1 | 1 | |
Elongation factor Ts (EF-Ts), dimerisation domain | Elongation factor Ts (EF-Ts), dimerisation domain | 1 | 1 | |
Tryptophan synthase beta subunit-like PLP-dependent enzymes | ACT-like | 1 | 1 | |
FYVE/PHD zinc finger | PUA domain-like | 1 | 1 | |
Amine oxidase N-terminal region | Amine oxidase catalytic domain | 1 | 1 | |
MoeA N-terminal region -like | MoeA C-terminal domain-like | 1 | 1 | |
Zinc hairpin stack | Phase 1 flagellin | 1 | 1 | |
Galactose oxidase, central domain | Protein kinase-like (PK-like) | 1 | 1 | |
Nudix | ARM repeat | 1 | 1 | |
UROD/MetE-like | UROD/MetE-like | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | ENTH/VHS domain | 1 | 1 | |
TATA-box binding protein-like | DNA-glycosylase | 1 | 1 | |
SIS domain | CBS-domain pair | 1 | 1 | |
Nucleic acid-binding proteins | TPR-like | 1 | 1 | |
TrmE connector domain | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
ArfGap/RecO-like zinc finger | Ankyrin repeat | 1 | 1 | |
Cap-Gly domain | L domain-like | 1 | 1 | |
Adenine nucleotide alpha hydrolases-like | DHS-like NAD/FAD-binding domain | 1 | 1 | |
WD40 repeat-like | Ribonuclease H-like | 1 | 1 | |
Ankyrin repeat | Nudix | 1 | 1 | |
PH domain-like | ARM repeat | 1 | 1 | |
Dehydroquinate synthase-like | NAD(P)-binding Rossmann-fold domains | 1 | 1 | |
RNA-binding domain, RBD | R3H domain | 1 | 1 | |
PH domain-like | Phospholipase D/nuclease | 1 | 1 | |
Globin-like | Globin-like | 1 | 1 | |
CCCH zinc finger | Retrovirus zinc finger-like domains | 1 | 1 | |
Retrovirus zinc finger-like domains | HIT-like | 1 | 1 | |
ARM repeat | HIT/MYND zinc finger-like | 1 | 1 | |
Dom34/Pelota N-terminal domain-like | Translational machinery components | 1 | 1 | |
DAK1/DegV-like | DhaL-like | 1 | 1 | |
FYVE/PHD zinc finger | Concanavalin A-like lectins/glucanases | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | GAT-like domain | 1 | 1 | |
Oxidoreductase molybdopterin-binding domain | Riboflavin synthase domain-like | 1 | 1 | |
4Fe-4S ferredoxins | Formate dehydrogenase/DMSO reductase, domains 1-3 | 1 | 1 | |
Radical SAM enzymes | Acyl-CoA N-acyltransferases (Nat) | 1 | 1 | |
BRCT domain | Lesion bypass DNA polymerase (Y-family), little finger domain | 1 | 1 | |
DNase I-like | PUA domain-like | 1 | 1 | |
PUA domain-like | Nucleotidylyl transferase | 1 | 1 | |
Ubiquitin-like | AN1-like Zinc finger | 1 | 1 | |
Phase 1 flagellin | RING/U-box | 1 | 1 | |
Carbon-nitrogen hydrolase | Adenine nucleotide alpha hydrolases-like | 1 | 1 | |
RING/U-box | TRAF domain-like | 1 | 1 | |
Chaperone J-domain | CSL zinc finger | 1 | 1 | |
Tudor/PWWP/MBT | RING/U-box | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Hypothetical protein YjiA, C-terminal domain | 1 | 1 | |
FYVE/PHD zinc finger | Acyl-CoA N-acyltransferases (Nat) | 1 | 1 | |
PH domain-like | Ankyrin repeat | 1 | 1 | |
RING/U-box | Cytochrome P450 | 1 | 1 | |
EPT/RTPC-like | Aminoacid dehydrogenase-like, N-terminal domain | 1 | 1 | |
Tetrahydrobiopterin biosynthesis enzymes-like | Dihydropteroate synthetase-like | 1 | 1 | |
FAD/NAD(P)-binding domain | 4Fe-4S ferredoxins | 1 | 1 | |
Rudiment single hybrid motif | PurM N-terminal domain-like | 1 | 1 | |
HD-domain/PDEase-like | Regulator of G-protein signaling, RGS | 1 | 1 | |
E set domains | Glycosyl hydrolase domain | 1 | 1 | |
Metalloproteases ("zincins"), catalytic domain | Bromodomain | 1 | 1 | |
"Winged helix" DNA-binding domain | Protein kinase-like (PK-like) | 1 | 1 | |
ARID-like | Clavaminate synthase-like | 1 | 1 | |
DNA ligase/mRNA capping enzyme, catalytic domain | BRCT domain | 1 | 1 | |
HMA, heavy metal-associated domain | Cu,Zn superoxide dismutase-like | 1 | 1 | |
RING/U-box | S-adenosyl-L-methionine-dependent methyltransferases | 1 | 1 | |
"Winged helix" DNA-binding domain | CheY-like | 1 | 1 | |
FYVE/PHD zinc finger | Clavaminate synthase-like | 1 | 1 | |
Hypothetical protein YjbJ | Hypothetical protein YjbJ | 1 | 1 | |
FAD/NAD(P)-binding domain | Nitrite and sulphite reductase 4Fe-4S domain-like | 1 | 1 | |
NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | 1 | 1 | |
Ribonuclease H-like | Nucleic acid-binding proteins | 1 | 1 | |
RNase III domain-like | dsRNA-binding domain-like | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | vWA-like | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Signal peptide-binding domain | 1 | 1 | |
NSFL1 (p97 ATPase) cofactor p47, SEP domain | Ubiquitin-like | 1 | 1 | |
F-box domain | RCC1/BLIP-II | 1 | 1 | |
Tricorn protease domain 2 | Cytochrome P450 | 1 | 1 | |
PH domain-like | (Phosphotyrosine protein) phosphatases II | 1 | 1 | |
Tryptophan synthase beta subunit-like PLP-dependent enzymes | CBS-domain pair | 1 | 1 | |
HAD-like | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
(Trans)glycosidases | Six-hairpin glycosidases | 1 | 1 | |
Calpain large subunit, middle domain (domain III) | Calpain large subunit, middle domain (domain III) | 1 | 1 | |
DNA polymerase beta, N-terminal domain-like | Nucleotidyltransferase | 1 | 1 | |
UBC-like | Class II aaRS ABD-related | 1 | 1 | |
Nucleotide-diphospho-sugar transferases | ARM repeat | 1 | 1 | |
Homocysteine S-methyltransferase | Dihydropteroate synthetase-like | 1 | 1 | |
Adenine nucleotide alpha hydrolases-like | Argininosuccinate synthetase, C-terminal domain | 1 | 1 | |
Tudor/PWWP/MBT | S-adenosyl-L-methionine-dependent methyltransferases | 1 | 1 | |
UBA-like | UBA-like | 1 | 1 | |
SH3-domain | Ras GEF | 1 | 1 | |
Domain of poly(ADP-ribose) polymerase | ADP-ribosylation | 1 | 1 | |
6-phosphogluconate dehydrogenase C-terminal domain-like | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 1 | 1 | |
E set domains | WD40 repeat-like | 1 | 1 | |
FYVE/PHD zinc finger | Tudor/PWWP/MBT | 1 | 1 | |
RING/U-box | Glucocorticoid receptor-like (DNA-binding domain) | 1 | 1 | |
HMA, heavy metal-associated domain | HAD-like | 1 | 1 | |
Periplasmic binding protein-like I | PH domain-like | 1 | 1 | |
Translation proteins SH3-like domain | ARM repeat | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | F-box domain | 1 | 1 | |
WW domain | Formin homology 2 domain (FH2 domain) | 1 | 1 | |
BAR/IMD domain-like | BAR/IMD domain-like | 1 | 1 | |
Sialidases | Oligoxyloglucan reducing end-specific cellobiohydrolase | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | PRTase-like | 1 | 1 | |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | SIS domain | 1 | 1 | |
YbaK/ProRS associated domain | Class II aaRS ABD-related | 1 | 1 | |
Glutathione synthetase ATP-binding domain-like | NAD(P)-binding Rossmann-fold domains | 1 | 1 | |
ACT-like | Aromatic aminoacid monoxygenases, catalytic and oligomerization domains | 1 | 1 | |
Molybdenum cofactor biosynthesis proteins | MoeA N-terminal region -like | 1 | 1 | |
FYVE/PHD zinc finger | Elongation factor TFIIS domain 2 | 1 | 1 | |
Thiamin pyrophosphokinase, catalytic domain | Thiamin pyrophosphokinase, substrate-binding domain | 1 | 1 | |
Ankyrin repeat | S-adenosyl-L-methionine-dependent methyltransferases | 1 | 1 | |
HMA, heavy metal-associated domain | HMA, heavy metal-associated domain | 1 | 1 | |
SAP domain | Protein kinase-like (PK-like) | 1 | 1 | |
Ribonuclease H-like | HRDC-like | 1 | 1 | |
CHY zinc finger-like | Zinc hairpin stack | 1 | 1 | |
Ankyrin repeat | POZ domain | 1 | 1 | |
Galactose-binding domain-like | ARM repeat | 1 | 1 | |
PurM C-terminal domain-like | Class I glutamine amidotransferase-like | 1 | 1 | |
Ubiquitin-like | Cysteine proteinases | 1 | 1 | |
Cytochrome c oxidase subunit II-like, transmembrane region | Cupredoxins | 1 | 1 | |
Ypt/Rab-GAP domain of gyp1p | Rhodanese/Cell cycle control phosphatase | 1 | 1 | |
SPOC domain-like | C-terminal domain of Ku80 | 1 | 1 | |
Protein kinase-like (PK-like) | BEACH domain | 1 | 1 | |
vWA-like | Cysteine-rich domain | 1 | 1 | |
Fumarylacetoacetate hydrolase, FAH, N-terminal domain | FAH | 1 | 1 | |
Cytochrome b5-like heme/steroid binding domain | Ferredoxin reductase-like, C-terminal NADP-linked domain | 1 | 1 | |
UBA-like | NSFL1 (p97 ATPase) cofactor p47, SEP domain | 1 | 1 | |
Dihydropteroate synthetase-like | Methionine synthase domain | 1 | 1 | |
Nitrite/Sulfite reductase N-terminal domain-like | ISP domain | 1 | 1 | |
PH domain-like | RNI-like | 1 | 1 | |
Dehydroquinate synthase-like | EPT/RTPC-like | 1 | 1 | |
"Winged helix" DNA-binding domain | GTPase activation domain, GAP | 1 | 1 | |
GST C-terminal domain-like | Nucleic acid-binding proteins | 1 | 1 | |
NAD(P)-binding Rossmann-fold domains | Tetrapyrrole methylase | 1 | 1 | |
Class II aaRS and biotin synthetases | SufE/NifU | 1 | 1 | |
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | Cytochrome b5-like heme/steroid binding domain | 1 | 1 | |
Staphylococcal nuclease | Tudor/PWWP/MBT | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | Aldolase | 1 | 1 | |
YbaK/ProRS associated domain | C-terminal domain of ProRS | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | WD40 repeat-like | 1 | 1 | |
Fibronectin type III | BRCT domain | 1 | 1 | |
Ribonuclease H-like | RuvA domain 2-like | 1 | 1 | |
DHS-like NAD/FAD-binding domain | ARID-like | 1 | 1 | |
TRAF domain-like | TRAF domain-like | 1 | 1 | |
Class II aaRS ABD-related | C-terminal domain of ProRS | 1 | 1 | |
Tex N-terminal region-like | Nucleic acid-binding proteins | 1 | 1 | |
(Phosphotyrosine protein) phosphatases II | C2 domain (Calcium/lipid-binding domain, CaLB) | 1 | 1 | |
UBC-like | Class II aaRS and biotin synthetases | 1 | 1 | |
Nucleic acid-binding proteins | eIF2alpha middle domain-like | 1 | 1 | |
Calcium ATPase, transmembrane domain M | Calcium ATPase, transmembrane domain M | 1 | 1 | |
Obg GTP-binding protein N-terminal domain | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
Homocysteine S-methyltransferase | Methionine synthase activation domain-like | 1 | 1 | |
Ubiquitin-like | Acid proteases | 1 | 1 | |
Tex N-terminal region-like | Ribonuclease H-like | 1 | 1 | |
RING/U-box | Cyclophilin-like | 1 | 1 | |
ARM repeat | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 1 | 1 | |
Soluble quinoprotein glucose dehydrogenase | WD40 repeat-like | 1 | 1 | |
Ypt/Rab-GAP domain of gyp1p | Myosin rod fragments | 1 | 1 | |
ATP-dependent DNA ligase DNA-binding domain | BRCT domain | 1 | 1 | |
Cytochrome P450 | Prefoldin | 1 | 1 | |
BRCT domain | DNA polymerase beta, N-terminal domain-like | 1 | 1 | |
Dihydropteroate synthetase-like | Methionine synthase activation domain-like | 1 | 1 | |
CCCH zinc finger | RING/U-box | 1 | 1 | |
NAD(P)-binding Rossmann-fold domains | Citrate synthase | 1 | 1 | |
RNA-binding domain, RBD | Surp module (SWAP domain) | 1 | 1 | |
Putative DNA-binding domain | Class II aaRS and biotin synthetases | 1 | 1 | |
PRP4-like | Functional domain of the splicing factor Prp18 | 1 | 1 | |
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain | Alkaline phosphatase-like | 1 | 1 | |
FYVE/PHD zinc finger | GroEL apical domain-like | 1 | 1 | |
Tricorn protease domain 2 | WD40 repeat-like | 1 | 1 | |
Ubiquitin-like | RNI-like | 1 | 1 | |
RNI-like | beta-sandwich domain of Sec23/24 | 1 | 1 | |
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | Type II DNA topoisomerase | 1 | 1 | |
PH domain-like | Ran binding protein zinc finger-like | 1 | 1 | |
Rhomboid-like | UBA-like | 1 | 1 | |
Glutathione synthetase ATP-binding domain-like | N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) | 1 | 1 | |
P-loop containing nucleoside triphosphate hydrolases | PLP-dependent transferases | 1 | 1 | |
Arp2/3 complex subunits | Arp2/3 complex subunits | 1 | 1 | |
Retrovirus zinc finger-like domains | DNase I-like | 1 | 1 | |
Regulator of G-protein signaling, RGS | PX domain | 1 | 1 | |
Dihydropteroate synthetase-like | Cobalamin (vitamin B12)-binding domain | 1 | 1 | |
lambda repressor-like DNA-binding domains | Cyanase C-terminal domain | 1 | 1 | |
Six-hairpin glycosidases | Six-hairpin glycosidases | 1 | 1 | |
FAD/NAD(P)-binding domain | Cytochrome b5-like heme/steroid binding domain | 1 | 1 | |
YbaK/ProRS associated domain | Class II aaRS and biotin synthetases | 1 | 1 | |
EPT/RTPC-like | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
N-terminal domain of MutM-like DNA repair proteins | S13-like H2TH domain | 1 | 1 | |
WGR domain-like | Domain of poly(ADP-ribose) polymerase | 1 | 1 | |
Thioredoxin-like | Galactose-binding domain-like | 1 | 1 | |
Folate-binding domain | Folate-binding domain | 1 | 1 | |
Class II aaRS and biotin synthetases | Anticodon-binding domain of PheRS | 1 | 1 | |
E set domains | Multidrug efflux transporter AcrB transmembrane domain | 1 | 1 | |
CHY zinc finger-like | Phase 1 flagellin | 1 | 1 | |
EF-hand | PX domain | 1 | 1 | |
Nucleic acid-binding proteins | SH2 domain | 1 | 1 | |
Spectrin repeat | GAS2 domain-like | 1 | 1 | |
Clavaminate synthase-like | RING/U-box | 1 | 1 | |
GST C-terminal domain-like | Ribosomal protein L25-like | 1 | 1 | |
Ubiquitin-like | Cap-Gly domain | 1 | 1 | |
all-alpha NTP pyrophosphatases | ALDH-like | 1 | 1 | |
Cytochrome P450 | Ferredoxin reductase-like, C-terminal NADP-linked domain | 1 | 1 | |
Endosomal sorting complex assembly domain | VPS28 C-terminal domain-like | 1 | 1 | |
Tex N-terminal region-like | RuvA domain 2-like | 1 | 1 | |
Methionyl-tRNA synthetase (MetRS), Zn-domain | Nucleotidylyl transferase | 1 | 1 | |
Glutamine synthetase/guanido kinase | GatB/YqeY motif | 1 | 1 | |
Cysteine proteinases | Ribonuclease H-like | 1 | 1 | |
NAD(P)-binding Rossmann-fold domains | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 1 | 1 | |
FAD-linked reductases, C-terminal domain | 4Fe-4S ferredoxins | 1 | 1 | |
RING/U-box | UBA-like | 1 | 1 | |
MIR domain | MIR domain | 1 | 1 | |
Hypothetical protein SAV1430 | Fe-S cluster assembly (FSCA) domain-like | 1 | 1 | |
GroES-like | GroES-like | 1 | 1 | |
Histone-fold | ARM repeat | 1 | 1 | |
UBA-like | P-loop containing nucleoside triphosphate hydrolases | 1 | 1 | |
Ribulose-phoshate binding barrel | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 1 | 1 | |