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  Home > Genomes > Methanoregula boonei 6A8 > Domain pairs graph

Domain pairs in Methanoregula boonei 6A8

Pairs are all adjacent. Each node represents a superfamily. The connections link domains which form a pair. The size of each node corresponds to the number of proteins containing that superfamily. The width of each connection is proportional to the number of proteins containing the domain pair. Place your mouse over a node to see the name of the superfamily, or click to go to its page.


Full size image

../temp/dot_neato_domain_pair_networks/3p/sortgens_genome_3p_adjacentboth_pdbno_allno.png

Visualisation generated by Sarah Kummerfeld using GraphViz.

Download compressed postscript file.
Download dot file (GraphViz data format).
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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