SUPERFAMILY 1.75 HMM library and genome assignments server

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With other acceptors

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Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Root: EC Hierarchy (from IntEnz release 70)

Shortest distance to current term (+ for parents, - for children) EC term [EC ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   root [root] <6>
+ + 2:   Oxidoreductases [1] <23>(183|263) (202|169|83)
+ 1:   Acting on the CH-CH group of donors [1.3] <8>(32|36) (34|23|12)
0:   With other acceptors [1.3.99] <33>(8|8) (9|4|1)
- 1:   (R)-benzylsuccinyl-CoA dehydrogenase [1.3.99.21](0|0) (0|0|0)
- 1:   1-hydroxycarotenoid 3,4-desaturase [1.3.99.27](0|0) (0|0|0)
- 1:   2-amino-4-deoxychorismate dehydrogenase [1.3.99.24](0|0) (0|0|0)
- 1:   2-furoyl-CoA dehydrogenase [1.3.99.8](0|0) (0|0|0)
- 1:   2-methylacyl-CoA dehydrogenase [1.3.99.12](0|0) (0|0|0)
- 1:   3-hydroxybenzoyl-CoA reductase [1.3.99.n1](0|0) (0|0|0)
- 1:   3-oxo-5-alpha-steroid 4-dehydrogenase [1.3.99.5](0|0) (0|0|0)
- 1:   3-oxo-5-beta-steroid 4-dehydrogenase [1.3.99.6](0|0) (0|0|0)
- 1:   3-oxosteroid 1-dehydrogenase [1.3.99.4](0|0) (0|0|0)
- 1:   Acyl-CoA dehydrogenase [1.3.99.3](2|2) (2|1|0)
- 1:   All-trans-retinol 13,14-reductase [1.3.99.23](0|0) (0|0|0)
- 1:   All-trans-zeta-carotene desaturase [1.3.99.26](0|0) (0|0|0)
- 1:   Carvone reductase [1.3.99.25](0|0) (0|0|0)
- 1:   Coproporphyrinogen dehydrogenase [1.3.99.22](1|1) (1|0|0)
- 1:   Cyclohexanone dehydrogenase [1.3.99.14](0|0) (0|0|0)
- 1:   Glutaryl-CoA dehydrogenase [1.3.99.7](0|0) (2|1|0)
- 1:   Isoquinoline 1-oxidoreductase [1.3.99.16](0|0) (0|0|0)
- 1:   Isovaleryl-CoA dehydrogenase [1.3.99.10](2|2) (0|0|0)
- 1:   Long-chain-acyl-CoA dehydrogenase [1.3.99.13](0|0) (0|0|0)
- 1:   Phytoene desaturase (3,4-didehydrolycopene-forming [1.3.99.30](0|0) (0|0|0)
- 1:   Phytoene desaturase (lycopene-forming) [1.3.99.31](0|0) (0|0|0)
- 1:   Phytoene desaturase (neurosporene-forming) [1.3.99.28](0|0) (0|0|0)
- 1:   Phytoene desaturase (zeta-carotene-forming) [1.3.99.29](0|0) (0|0|0)
- 1:   Quinaldate 4-oxidoreductase [1.3.99.18](0|0) (0|0|0)
- 1:   Quinoline 2-oxidoreductase [1.3.99.17](0|0) (0|0|0)
- 1:   Quinoline-4-carboxylate 2-oxidoreductase [1.3.99.19](0|0) (0|0|0)
- 1:   Succinate dehydrogenase [1.3.99.1](5|5) (6|3|1)
- 1:   Transferred entry: 1.21.99.1 [1.3.99.9](0|0) (0|0|0)
- 1:   Transferred entry: 1.3.5.2 [1.3.99.11](0|0) (0|0|0)
- 1:   Transferred entry: 1.3.7.8 [1.3.99.15](0|0) (0|0|0)
- 1:   Transferred entry: 1.3.7.9 [1.3.99.20](0|0) (0|0|0)
- 1:   Transferred entry: 1.3.8.1 [1.3.99.2](0|0) (0|0|0)
- 1:   Transferred entry: 4.1.99.19 [1.3.99.n2](0|0) (0|0|0)


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Superfamily

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SCOP term FDR (all) Annotation (direct or inherited)
Acyl-CoA dehydrogenase NM domain-like0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Acyl-CoA dehydrogenase C-terminal domain-like0Direct
Radical SAM enzymes0Direct
FAD/NAD(P)-binding domain7.054e-16Direct
Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain0.000000000001972Direct
2Fe-2S ferredoxin-like0.000000000005336Direct
alpha-helical ferredoxin0.000000003239Direct


Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP term FDR (all) Annotation (direct or inherited)
Oxygen-independent coproporphyrinogen III oxidase HemN0Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain5.205e-16Direct
Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain0.0000000000008055Direct
2Fe-2S ferredoxin domains from multidomain proteins0.000000000002138Direct
Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain0.000000000009947Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this EC term
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Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
FAD/NAD(P)-binding domain0Direct
Radical SAM enzymes0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain0.0000000000002725Direct
Acyl-CoA dehydrogenase NM domain-like0.000000000000667Direct
2Fe-2S ferredoxin-like0.0000000000006928Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0000000000009185Direct
Multiheme cytochromes0.0000000002888Direct
alpha-helical ferredoxin0.0000000005158Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51905,56425
  • 51905 - FAD/NAD(P)-binding domain
  • 56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
  • 0Direct
    48695,51905
  • 48695 - Multiheme cytochromes
  • 51905 - FAD/NAD(P)-binding domain
  • 0Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.000000000000667Direct
    54292,46548
  • 54292 - 2Fe-2S ferredoxin-like
  • 46548 - alpha-helical ferredoxin
  • 0.000000000003435Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48695,51905,56425
  • 48695 - Multiheme cytochromes
  • 51905 - FAD/NAD(P)-binding domain
  • 56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
  • 0Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this EC term
    Plot tree as:   Download Newick format tree:
    (show help)