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Exoribonucleases producing 5'-phosphomonoesters

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Root: EC Hierarchy (from IntEnz release 70)

Shortest distance to current term (+ for parents, - for children) EC term [EC ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   root [root] <6>
+ + 2:   Hydrolases [3] <13>(329|528) (368|389|207)
+ 1:   Acting on ester bonds [3.1] <20>(124|170) (142|112|48)
0:   Exoribonucleases producing 5'-phosphomonoesters [3.1.13] <5>(18|18) (19|18|13)
- 1:   Exoribonuclease H [3.1.13.2](10|11) (10|11|11)
- 1:   Exoribonuclease II [3.1.13.1](1|2) (1|1|0)
- 1:   Oligonucleotidase [3.1.13.3](0|0) (0|0|0)
- 1:   Poly(A)-specific ribonuclease [3.1.13.4](6|4) (7|4|1)
- 1:   Ribonuclease D [3.1.13.5](1|2) (1|2|1)


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Superfamily

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SCOP term FDR (all) Annotation (direct or inherited)
DNA/RNA polymerases0Direct
DNA-binding domain of retroviral integrase0Direct
Retrovirus capsid dimerization domain-like0Direct
Acid proteases0Direct
Ribonuclease H-like0Direct
WD40 repeat-like0Direct
DNase I-like0Direct
Cysteine proteinases0Direct
R3H domain0Direct
Retroviral matrix proteins0Direct
HRDC-like0Direct
Retrovirus capsid protein, N-terminal core domain0Direct
Nucleic acid-binding proteins0Direct
Retrovirus zinc finger-like domains0Direct
N-terminal Zn binding domain of HIV integrase0Direct
L domain-like0Direct
dUTPase-like0.0000000006277Direct
RNA-binding domain, RBD0.00000003273Direct


Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP term FDR (all) Annotation (direct or inherited)
DnaQ-like 3'-5' exonuclease0Direct
Retrovirus zinc finger-like domains0Direct
R3H domain0Direct
Retrovirus capsid protein C-terminal domain0Direct
RNB domain-like0Direct
CAF1-like ribonuclease0Direct
N-terminal Zn binding domain of HIV integrase0Direct
Immunodeficiency virus matrix proteins0Direct
Retroviral protease (retropepsin)0Direct
Reverse transcriptase0Direct
Cold shock DNA-binding domain-like0Direct
RNase D C-terminal domains0Direct
Retroviral integrase, catalytic domain0Direct
Retrovirus capsid protein, N-terminal core domain0Direct
DNA-binding domain of retroviral integrase0Direct
Ribonuclease H0.000000000000005133Direct
dUTPase-like0.0000000002668Direct
Canonical RBD0.00000002223Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this EC term
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Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNase I-like0Direct
WD40 repeat-like0Direct
N-terminal Zn binding domain of HIV integrase0Direct
Ribonuclease H-like0Direct
Acid proteases0Direct
Retroviral matrix proteins0Direct
R3H domain0Direct
Retrovirus zinc finger-like domains0Direct
Nucleic acid-binding proteins0Direct
L domain-like0Direct
DNA-binding domain of retroviral integrase0Direct
Retrovirus capsid protein, N-terminal core domain0Direct
HRDC-like0Direct
Retrovirus capsid dimerization domain-like0Direct
DNA/RNA polymerases0Direct
Cysteine proteinases0Direct
dUTPase-like0.0000000004768Direct
RNA-binding domain, RBD0.00000002535Direct
Quinoprotein alcohol dehydrogenase-like0.0000009943Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
82708,53098
  • 82708 - R3H domain
  • 53098 - Ribonuclease H-like
  • 0Direct
    47353,57756
  • 47353 - Retrovirus capsid dimerization domain-like
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    57756,50630
  • 57756 - Retrovirus zinc finger-like domains
  • 50630 - Acid proteases
  • 0Direct
    51283,46919
  • 51283 - dUTPase-like
  • 46919 - N-terminal Zn binding domain of HIV integrase
  • 0Direct
    54001,53098
  • 54001 - Cysteine proteinases
  • 53098 - Ribonuclease H-like
  • 0Direct
    53098,54928
  • 53098 - Ribonuclease H-like
  • 54928 - RNA-binding domain, RBD
  • 0Direct
    47943,47353
  • 47943 - Retrovirus capsid protein, N-terminal core domain
  • 47353 - Retrovirus capsid dimerization domain-like
  • 0Direct
    53098,51283
  • 53098 - Ribonuclease H-like
  • 51283 - dUTPase-like
  • 0Direct
    47819,47819
  • 47819 - HRDC-like
  • 47819 - HRDC-like
  • 0Direct
    50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    46919,53098
  • 46919 - N-terminal Zn binding domain of HIV integrase
  • 53098 - Ribonuclease H-like
  • 0Direct
    53098,46919
  • 53098 - Ribonuclease H-like
  • 46919 - N-terminal Zn binding domain of HIV integrase
  • 0Direct
    52058,56219
  • 52058 - L domain-like
  • 56219 - DNase I-like
  • 0Direct
    56672,53098
  • 56672 - DNA/RNA polymerases
  • 53098 - Ribonuclease H-like
  • 0Direct
    50630,56672
  • 50630 - Acid proteases
  • 56672 - DNA/RNA polymerases
  • 0Direct
    53098,50122
  • 53098 - Ribonuclease H-like
  • 50122 - DNA-binding domain of retroviral integrase
  • 0Direct
    47836,47943
  • 47836 - Retroviral matrix proteins
  • 47943 - Retrovirus capsid protein, N-terminal core domain
  • 0Direct
    53098,47819
  • 53098 - Ribonuclease H-like
  • 47819 - HRDC-like
  • 0Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    53098,51283,46919
  • 53098 - Ribonuclease H-like
  • 51283 - dUTPase-like
  • 46919 - N-terminal Zn binding domain of HIV integrase
  • 0Direct
    56672,53098,51283
  • 56672 - DNA/RNA polymerases
  • 53098 - Ribonuclease H-like
  • 51283 - dUTPase-like
  • 0Direct
    53098,46919,53098
  • 53098 - Ribonuclease H-like
  • 46919 - N-terminal Zn binding domain of HIV integrase
  • 53098 - Ribonuclease H-like
  • 0Direct
    57756,50630,56672
  • 57756 - Retrovirus zinc finger-like domains
  • 50630 - Acid proteases
  • 56672 - DNA/RNA polymerases
  • 0Direct
    47836,47943,47353
  • 47836 - Retroviral matrix proteins
  • 47943 - Retrovirus capsid protein, N-terminal core domain
  • 47353 - Retrovirus capsid dimerization domain-like
  • 0Direct
    47943,47353,57756
  • 47943 - Retrovirus capsid protein, N-terminal core domain
  • 47353 - Retrovirus capsid dimerization domain-like
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    56672,53098,46919
  • 56672 - DNA/RNA polymerases
  • 53098 - Ribonuclease H-like
  • 46919 - N-terminal Zn binding domain of HIV integrase
  • 0Direct
    46919,53098,50122
  • 46919 - N-terminal Zn binding domain of HIV integrase
  • 53098 - Ribonuclease H-like
  • 50122 - DNA-binding domain of retroviral integrase
  • 0Direct
    47353,57756,50630
  • 47353 - Retrovirus capsid dimerization domain-like
  • 57756 - Retrovirus zinc finger-like domains
  • 50630 - Acid proteases
  • 0Direct
    53098,47819,47819
  • 53098 - Ribonuclease H-like
  • 47819 - HRDC-like
  • 47819 - HRDC-like
  • 0Direct
    51283,46919,53098
  • 51283 - dUTPase-like
  • 46919 - N-terminal Zn binding domain of HIV integrase
  • 53098 - Ribonuclease H-like
  • 0Direct
    50630,56672,53098
  • 50630 - Acid proteases
  • 56672 - DNA/RNA polymerases
  • 53098 - Ribonuclease H-like
  • 0Direct
    82708,53098,54928
  • 82708 - R3H domain
  • 53098 - Ribonuclease H-like
  • 54928 - RNA-binding domain, RBD
  • 0Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this EC term
    Plot tree as:   Download Newick format tree:
    (show help)