SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Racemases and epimerases

(show info)

Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Root: EC Hierarchy (from IntEnz release 70)

Shortest distance to current term (+ for parents, - for children) EC term [EC ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   root [root] <6>
+ 1:   Isomerases [5] <6>(93|113) (113|70|29)
0:   Racemases and epimerases [5.1] <4>(21|23) (27|13|6)
- 1:   Acting on carbohydrates and derivatives [5.1.3] <27>(11|12) (13|2|0)
- 1:   Acting on amino acids and derivatives [5.1.1] <19>(8|8) (10|8|4)
- 1:   Acting on hydroxy acids and derivatives [5.1.2] <6>(3|3) (3|3|2)
- 1:   Acting on other compounds [5.1.99] <5>(0|0) (2|0|0)


Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP term FDR (all) Annotation (direct or inherited)
PLP-binding barrel0Direct
Kelch motif0Direct
Alanine racemase C-terminal domain-like0Direct
ClpP/crotonase0Direct
AraD/HMP-PK domain-like0Direct
6-phosphogluconate dehydrogenase C-terminal domain-like0Direct
Dimeric alpha+beta barrel0Direct
Diaminopimelate epimerase-like0Direct
Aspartate/glutamate racemase0Direct
NAD(P)-binding Rossmann-fold domains0Direct
Galactose mutarotase-like0.000000000000002098Direct
ACP-like0.00001226Direct
CoA-dependent acyltransferases0.001299Inherited
Six-hairpin glycosidases0.03177Inherited
Acetyl-CoA synthetase-like0.1432Inherited
UDP-Glycosyltransferase/glycogen phosphorylase0.4591Inherited
Tryptophan synthase beta subunit-like PLP-dependent enzymes0.6368Inherited
RbsD-like0.9529Inherited
RmlC-like cupins1Inherited
Xylose isomerase-like1Inherited
Ribulose-phoshate binding barrel1Inherited


Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP term FDR (all) Annotation (direct or inherited)
Tyrosine-dependent oxidoreductases0Direct
UDP-N-acetylglucosamine 2-epimerase0Direct
Crotonase-like0Direct
Aspartate/glutamate racemase0Direct
N-acylglucosamine (NAG) epimerase0Direct
HCDH C-domain-like0Direct
Alanine racemase0Direct
dTDP-sugar isomerase0Direct
Diaminopimelate epimerase0Direct
D-ribulose-5-phosphate 3-epimerase0Direct
YiiL-like0Direct
Aldose 1-epimerase (mutarotase)0Direct
Proline racemase0Direct
Alanine racemase-like, N-terminal domain0Direct
Kelch motif0Direct
AraD-like aldolase/epimerase0Direct
6-phosphogluconate dehydrogenase-like, N-terminal domain0Direct
NanE-like0Direct
Peptidyl carrier domain0.000000000003056Direct
ROK0.0001717Direct
Acetyl-CoA synthetase-like0.151Inherited
Tryptophan synthase beta subunit-like PLP-dependent enzymes0.6438Inherited
RbsD-like0.8842Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this EC term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Diaminopimelate epimerase-like0Direct
NAD(P)-binding Rossmann-fold domains0Direct
AraD/HMP-PK domain-like0Direct
6-phosphogluconate dehydrogenase C-terminal domain-like0Direct
Aspartate/glutamate racemase0Direct
Dimeric alpha+beta barrel0Direct
ClpP/crotonase0Direct
Alanine racemase C-terminal domain-like0Direct
PLP-binding barrel0Direct
Kelch motif0Direct
Galactose mutarotase-like0.000000000000001741Direct
ACP-like0.00000991Direct
CoA-transferase family III (CaiB/BaiF)0.0001043Direct
Chondroitin AC/alginate lyase0.0002631Direct
CoA-dependent acyltransferases0.00109Inherited
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase0.00237Inherited
Six-hairpin glycosidases0.02884Inherited
Acetyl-CoA synthetase-like0.1281Inherited
UDP-Glycosyltransferase/glycogen phosphorylase0.4221Inherited
Tryptophan synthase beta subunit-like PLP-dependent enzymes0.593Inherited
RbsD-like0.8978Inherited
Enolase C-terminal domain-like1Inherited
Actin-like ATPase domain1Inherited
Enolase N-terminal domain-like1Inherited
RmlC-like cupins1Inherited
Xylose isomerase-like1Inherited
Ribulose-phoshate binding barrel1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54506,54506
  • 54506 - Diaminopimelate epimerase-like
  • 54506 - Diaminopimelate epimerase-like
  • 0Direct
    51735,48179
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 0Direct
    52096,51735
  • 52096 - ClpP/crotonase
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    53681,53681
  • 53681 - Aspartate/glutamate racemase
  • 53681 - Aspartate/glutamate racemase
  • 0Direct
    51735,74650
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 74650 - Galactose mutarotase-like
  • 0Direct
    48179,48179
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 0Direct
    53756,53067
  • 53756 - UDP-Glycosyltransferase/glycogen phosphorylase
  • 53067 - Actin-like ATPase domain
  • 0Direct
    56801,47336
  • 56801 - Acetyl-CoA synthetase-like
  • 47336 - ACP-like
  • 0.0000000000005068Direct
    47336,52777
  • 47336 - ACP-like
  • 52777 - CoA-dependent acyltransferases
  • 0.000000000002115Direct
    52777,52777
  • 52777 - CoA-dependent acyltransferases
  • 52777 - CoA-dependent acyltransferases
  • 0.0000001473Direct
    52777,56801
  • 52777 - CoA-dependent acyltransferases
  • 56801 - Acetyl-CoA synthetase-like
  • 0.0000004118Direct
    54826,51604
  • 54826 - Enolase N-terminal domain-like
  • 51604 - Enolase C-terminal domain-like
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    51735,48179,48179
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 0Direct
    52096,51735,48179
  • 52096 - ClpP/crotonase
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 0Direct
    56801,47336,52777
  • 56801 - Acetyl-CoA synthetase-like
  • 47336 - ACP-like
  • 52777 - CoA-dependent acyltransferases
  • 0.00000000000008587Direct
    47336,52777,52777
  • 47336 - ACP-like
  • 52777 - CoA-dependent acyltransferases
  • 52777 - CoA-dependent acyltransferases
  • 0.000000000002115Direct
    52777,52777,56801
  • 52777 - CoA-dependent acyltransferases
  • 52777 - CoA-dependent acyltransferases
  • 56801 - Acetyl-CoA synthetase-like
  • 0.0000000187Direct
    52777,56801,47336
  • 52777 - CoA-dependent acyltransferases
  • 56801 - Acetyl-CoA synthetase-like
  • 47336 - ACP-like
  • 0.00000003687Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this EC term
    Plot tree as:   Download Newick format tree:
    (show help)