SUPERFAMILY 1.75 HMM library and genome assignments server

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DNA ligase (ATP)

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Root: EC Hierarchy (from IntEnz release 70)

Shortest distance to current term (+ for parents, - for children) EC term [EC ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   root [root] <6>
+ + + 3:   Ligases [6] <6>(80|99) (88|104|66)
+ + 2:   Forming phosphoric ester bonds [6.5] <1>(8|10) (8|9|8)
+ 1:   Ligases that form phosphoric-ester bonds [6.5.1] <4>(8|10) (8|9|8)
0:   DNA ligase (ATP) [6.5.1.1](1|2) (1|3|3)


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Superfamily

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SCOP term FDR (all) Annotation (direct or inherited)
ATP-dependent DNA ligase DNA-binding domain0Direct


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Family

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SCOP term FDR (all) Annotation (direct or inherited)
ATP-dependent DNA ligase DNA-binding domain0Direct
ATP-dependent DNA ligase catalytic domain0Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this EC term
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Jump to [ Top · EC Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ATP-dependent DNA ligase DNA-binding domain0Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
117018,56091
  • 117018 - ATP-dependent DNA ligase DNA-binding domain
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 0Direct
    50249,52113
  • 50249 - Nucleic acid-binding proteins
  • 52113 - BRCT domain
  • 0Direct
    52113,52113
  • 52113 - BRCT domain
  • 52113 - BRCT domain
  • 0.00000004003Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    56091,50249,52113
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
  • 52113 - BRCT domain
  • 0Direct
    117018,56091,50249
  • 117018 - ATP-dependent DNA ligase DNA-binding domain
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    50249,52113,52113
  • 50249 - Nucleic acid-binding proteins
  • 52113 - BRCT domain
  • 52113 - BRCT domain
  • 0Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this EC term
    Plot tree as:   Download Newick format tree:
    (show help)