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Candidatus Caldiarchaeum subterraneum superfamily assignments

Taxonomy
Taxonomy browser entry

Archaea; TACK group; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum; Candidatus Caldiarchaeum subterraneum

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1730 total
1253 (72 %) with assignment
295 average length
67 % amino acid coverage
Domains: 1661 total
486 unique superfamilies
259 unique families
272 average length
3.4 average superfamily size
71 % formed by duplication
Domain combinations: 222 domain pairs
628 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

134 126 30 6 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
52 50 15 1 SCOP 46785 "Winged helix" DNA-binding domain
48 48 15 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
29 27 6 6 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
23 21 3 0 SCOP 161098 MetI-like
23 23 11 3 SCOP 50249 Nucleic acid-binding proteins
17 15 10 1 SCOP 51905 FAD/NAD(P)-binding domain
16 14 4 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
16 16 3 4 SCOP 53383 PLP-dependent transferases
16 16 6 1 SCOP 53850 Periplasmic binding protein-like II
16 16 2 1 SCOP 56003 Molybdenum cofactor-binding domain
15 14 7 0 SCOP 52833 Thioredoxin-like
15 14 7 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
15 14 9 3 SCOP 54211 Ribosomal protein S5 domain 2-like
15 15 4 0 SCOP 81301 Nucleotidyltransferase
15 15 1 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
14 14 3 1 SCOP 88723 PIN domain-like
14 10 4 0 SCOP 49503 Cupredoxins
13 13 4 0 SCOP 53448 Nucleotide-diphospho-sugar transferases
13 13 9 2 SCOP 52374 Nucleotidylyl transferase
13 13 9 2 SCOP 55681 Class II aaRS and biotin synthetases
13 13 1 1 SCOP 51679 Bacterial luciferase-like
12 12 5 5 SCOP 51556 Metallo-dependent hydrolases
12 11 3 0 SCOP 54909 Dimeric alpha+beta barrel
11 11 3 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
11 11 4 1 SCOP 102114 Radical SAM enzymes
11 10 4 1 SCOP 54631 CBS-domain pair
11 11 2 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
10 10 2 0 SCOP 103473 MFS general substrate transporter
10 10 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
10 6 2 0 SCOP 53901 Thiolase-like
9 9 3 1 SCOP 51569 Aldolase
9 9 2 1 SCOP 51366 Ribulose-phoshate binding barrel
9 7 4 1 SCOP 53067 Actin-like ATPase domain
9 9 1 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
9 9 8 2 SCOP 50447 Translation proteins
9 9 1 1 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
9 9 2 0 SCOP 50331 MOP-like
8 8 5 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
8 7 3 1 SCOP 53271 PRTase-like
8 8 5 2 SCOP 56784 HAD-like
8 8 3 1 SCOP 56300 Metallo-dependent phosphatases
8 8 6 1 SCOP 54862 4Fe-4S ferredoxins
8 8 1 0 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
8 8 4 0 SCOP 50182 Sm-like ribonucleoproteins
8 5 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
8 6 3 0 SCOP 55608 Homing endonucleases
7 7 2 2 SCOP 53613 Ribokinase-like
7 7 1 2 SCOP 53720 ALDH-like
7 7 2 0 SCOP 54292 2Fe-2S ferredoxin-like
7 7 3 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
7 7 2 1 SCOP 50475 FMN-binding split barrel
7 5 4 1 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
7 6 4 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
7 7 2 1 SCOP 56176 FAD-binding/transporter-associated domain-like
6 6 2 0 SCOP 57829 Zn-binding ribosomal proteins
6 6 4 1 SCOP 50104 Translation proteins SH3-like domain
6 6 3 1 SCOP 100950 NagB/RpiA/CoA transferase-like
6 6 3 0 SCOP 109755 PhoU-like
6 6 3 3 SCOP 53633 Carbamate kinase-like
6 5 4 2 SCOP 52096 ClpP/crotonase
6 6 2 0 SCOP 53187 Zn-dependent exopeptidases
6 5 3 0 SCOP 55469 FMN-dependent nitroreductase-like
6 6 3 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
6 6 4 1 SCOP 52467 DHS-like NAD/FAD-binding domain
6 6 2 0 SCOP 53822 Periplasmic binding protein-like I
6 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 6 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
6 3 2 0 SCOP 47954 Cyclin-like
6 6 1 1 SCOP 47741 CO dehydrogenase ISP C-domain like
5 5 2 0 SCOP 56112 Protein kinase-like (PK-like)
5 5 3 2 SCOP 53098 Ribonuclease H-like
5 5 1 0 SCOP 52980 Restriction endonuclease-like
5 5 5 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
5 5 4 4 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
5 5 2 0 SCOP 54285 MoaD/ThiS
5 4 3 1 SCOP 51395 FMN-linked oxidoreductases
5 5 4 0 SCOP 50692 ADC-like
5 5 4 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
5 5 3 0 SCOP 88697 PUA domain-like
5 5 1 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
5 4 4 0 SCOP 55021 ACT-like
5 5 4 0 SCOP 46548 alpha-helical ferredoxin
5 5 1 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
5 5 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
5 5 2 1 SCOP 52922 TK C-terminal domain-like
5 4 4 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 3 2 SCOP 52317 Class I glutamine amidotransferase-like
4 4 3 1 SCOP 53137 Translational machinery components
4 4 3 1 SCOP 55920 Creatinase/aminopeptidase
4 4 2 0 SCOP 89447 AbrB/MazE/MraZ-like
4 4 2 0 SCOP 47240 Ferritin-like
4 4 1 0 SCOP 50129 GroES-like
4 2 1 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
4 4 1 0 SCOP 55811 Nudix
4 3 2 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 2 0 SCOP 64307 SirA-like
4 4 2 1 SCOP 56801 Acetyl-CoA synthetase-like
4 4 3 1 SCOP 55315 L30e-like
4 4 3 0 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
4 4 1 1 SCOP 53807 "Helical backbone" metal receptor
4 4 3 1 SCOP 51230 Single hybrid motif
4 4 3 0 SCOP 54975 Acylphosphatase/BLUF domain-like
4 4 4 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
4 3 3 0 SCOP 49464 Carboxypeptidase regulatory domain-like
4 4 1 0 SCOP 52440 PreATP-grasp domain
4 4 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
4 4 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
4 4 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 2 0 SCOP 140914 PriB N-terminal domain-like
3 3 3 1 SCOP 53697 SIS domain
3 3 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
3 3 1 1 SCOP 55282 RL5-like
3 3 3 0 SCOP 46946 S13-like H2TH domain
3 3 2 1 SCOP 75217 alpha/beta knot
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
3 3 1 1 SCOP 48576 Terpenoid synthases
3 3 2 0 SCOP 75169 DsrEFH-like
3 3 2 0 SCOP 49764 HSP20-like chaperones
3 2 2 0 SCOP 48371 ARM repeat
3 3 2 1 SCOP 109604 HD-domain/PDEase-like
3 3 3 2 SCOP 56672 DNA/RNA polymerases
3 3 1 0 SCOP 51726 UROD/MetE-like
3 3 1 0 SCOP 46579 Prefoldin
3 3 2 0 SCOP 110849 ParB/Sulfiredoxin
3 3 3 0 SCOP 57850 RING/U-box
3 3 1 1 SCOP 56529 FAH
3 3 1 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 2 0 SCOP 102712 JAB1/MPN domain
3 2 2 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
3 2 2 0 SCOP 46955 Putative DNA-binding domain
3 3 3 1 SCOP 52016 LeuD/IlvD-like
3 3 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
3 3 3 0 SCOP 57783 Zinc beta-ribbon
3 3 2 0 SCOP 50022 ISP domain
3 3 2 1 SCOP 117396 TM1631-like
3 3 3 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
3 3 3 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
3 3 1 0 SCOP 159659 Cgl1923-like
3 3 3 0 SCOP 102198 Putative cyclase
3 3 2 1 SCOP 46565 Chaperone J-domain
3 3 1 0 SCOP 82704 AlbA-like
3 3 2 0 SCOP 143437 THUMP domain-like
3 3 2 0 SCOP 63867 MoeA C-terminal domain-like
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 1 1 SCOP 48592 GroEL equatorial domain-like
3 2 2 0 SCOP 54980 EF-G C-terminal domain-like
3 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
3 3 1 1 SCOP 52029 GroEL apical domain-like
3 3 1 1 SCOP 56042 PurM C-terminal domain-like
3 3 1 1 SCOP 55326 PurM N-terminal domain-like
3 3 2 1 SCOP 63882 MoeA N-terminal region -like
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 1 1 1 SCOP 53738 Phosphoglucomutase, first 3 domains
3 3 2 0 SCOP 81271 TGS-like
3 3 1 0 SCOP 54849 GroEL-intermediate domain like
2 2 1 0 SCOP 53474 alpha/beta-Hydrolases
2 2 1 1 SCOP 53167 Purine and uridine phosphorylases
2 2 1 1 SCOP 53927 Cytidine deaminase-like
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
2 2 2 1 SCOP 55120 Pseudouridine synthase
2 2 2 0 SCOP 64182 DHH phosphoesterases
2 2 2 0 SCOP 110324 Ribosomal L27 protein-like
2 2 1 1 SCOP 51658 Xylose isomerase-like
2 2 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
2 2 2 0 SCOP 55174 Alpha-L RNA-binding motif
2 2 1 0 SCOP 82784 OsmC-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 0 SCOP 51161 Trimeric LpxA-like enzymes
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 0 SCOP 48150 DNA-glycosylase
2 2 1 1 SCOP 56770 HydA/Nqo6-like
2 2 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
2 2 2 2 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 55298 YjgF-like
2 2 1 0 SCOP 47113 Histone-fold
2 2 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
2 2 1 1 SCOP 48256 Citrate synthase
2 2 1 1 SCOP 53590 Nucleoside hydrolase
2 2 1 0 SCOP 55248 PCD-like
2 2 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
2 2 2 0 SCOP 57997 Tropomyosin
2 2 1 0 SCOP 51182 RmlC-like cupins
2 2 2 1 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
2 1 1 0 SCOP 55008 HMA, heavy metal-associated domain
2 2 2 0 SCOP 55961 Bet v1-like
2 2 1 2 SCOP 52768 Arginase/deacetylase
2 2 1 0 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 2 0 SCOP 49478 Cna protein B-type domain
2 2 2 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 2 0 SCOP 47598 Ribbon-helix-helix
2 2 1 0 SCOP 118196 YaeB-like
2 2 1 0 SCOP 143011 RelE-like
2 2 2 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 1 0 SCOP 56524 Oxidoreductase molybdopterin-binding domain
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 0 SCOP 54913 GlnB-like
2 2 1 1 SCOP 56762 HydB/Nqo4-like
2 2 2 0 SCOP 50800 PK beta-barrel domain-like
2 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 1 1 1 SCOP 103365 Hypothetical protein PH1602
2 2 1 1 SCOP 51391 Thiamin phosphate synthase
2 2 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
2 2 2 1 SCOP 56747 Prim-pol domain
2 2 1 1 SCOP 51604 Enolase C-terminal domain-like
2 2 1 0 SCOP 56024 Phospholipase D/nuclease
2 2 1 0 SCOP 89155 TorD-like
2 2 2 0 SCOP 49452 Starch-binding domain-like
2 2 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 2 0 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 0 SCOP 160980 SSO1389-like
2 2 2 1 SCOP 52777 CoA-dependent acyltransferases
2 2 2 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 2 0 SCOP 52743 Subtilisin-like
2 1 1 0 SCOP 50156 PDZ domain-like
2 1 1 0 SCOP 55979 DNA clamp
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 2 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
2 2 2 1 SCOP 81665 Calcium ATPase, transmembrane domain M
2 2 2 0 SCOP 51294 Hedgehog/intein (Hint) domain
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 1 1 1 SCOP 55945 TATA-box binding protein-like
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 1 SCOP 55261 GAD domain-like
2 2 2 0 SCOP 81653 Calcium ATPase, transduction domain A
2 2 1 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
2 2 1 1 SCOP 55666 Ribonuclease PH domain 2-like
2 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 2 0 SCOP 88802 Pre-PUA domain
2 2 1 0 SCOP 54585 Cdc48 domain 2-like
2 2 2 0 SCOP 141300 GatD N-terminal domain-like
2 2 1 0 SCOP 55267 tRNA-intron endonuclease N-terminal domain-like
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 0 SCOP 54197 HIT-like
1 1 1 0 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 0 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 0 SCOP 82649 SufE/NifU
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 89360 HesB-like domain
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 51419 PLP-binding barrel
1 1 1 1 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 54236 Ubiquitin-like
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 54495 UBC-like
1 1 1 1 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 0 SCOP 50891 Cyclophilin-like
1 1 1 1 SCOP 54534 FKBP-like
1 1 1 0 SCOP 53649 Alkaline phosphatase-like
1 1 1 0 SCOP 54427 NTF2-like
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 49785 Galactose-binding domain-like
1 1 1 0 SCOP 50630 Acid proteases
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 51445 (Trans)glycosidases
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 74650 Galactose mutarotase-like
1 1 1 0 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 0 SCOP 51306 LexA/Signal peptidase
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 1 SCOP 52972 ITPase-like
1 1 1 0 SCOP 48208 Six-hairpin glycosidases
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 55159 eIF1-like
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 1 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 103378 2-methylcitrate dehydratase PrpD
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 0 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
1 1 1 1 SCOP 141734 HisI-like
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 46458 Globin-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 1 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 144020 FdhE-like
1 1 1 1 SCOP 81324 Voltage-gated potassium channels
1 1 1 0 SCOP 55718 SCP-like
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 0 SCOP 58100 Bacterial hemolysins
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 0 SCOP 53300 vWA-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
1 1 1 0 SCOP 51206 cAMP-binding domain-like
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 102215 Creatininase
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 0 SCOP 53213 LigB-like
1 1 1 0 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 110087 DR1885-like metal-binding protein
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
1 1 1 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
1 1 1 1 SCOP 103025 Folate-binding domain
1 1 1 1 SCOP 144010 CofE-like
1 1 1 0 SCOP 143430 TTP0101/SSO1404-like
1 1 1 1 SCOP 142338 CofD-like
1 1 1 1 SCOP 51219 TRAP-like
1 1 1 1 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 53163 HybD-like
1 1 1 0 SCOP 159127 HupF/HypC-like
1 1 1 0 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 89562 RraA-like
1 1 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 1 SCOP 160519 BB2672-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 89124 Nop domain
1 1 1 1 SCOP 142535 AF0625-like
1 1 1 0 SCOP 143560 MK0786-like
1 1 1 1 SCOP 111249 Sulfolobus fructose-1,6-bisphosphatase-like
1 1 1 0 SCOP 158436 Ta0600-like
1 1 1 1 SCOP 160975 AF1531-like
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 54984 eEF-1beta-like
1 1 1 0 SCOP 57667 beta-beta-alpha zinc fingers
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
1 1 1 0 SCOP 158372 AF1782-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 160363 MTH889-like
1 1 1 0 SCOP 110455 Toprim domain
1 1 1 1 SCOP 103165 Ta1353-like
1 1 1 0 SCOP 56563 Major capsid protein gp5
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 101898 NHL repeat
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 117281 Kelch motif
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 48019 post-AAA+ oligomerization domain-like
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 160387 NosL/MerB-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 50965 Galactose oxidase, central domain
1 1 1 0 SCOP 49265 Fibronectin type III
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 143968 UbiD C-terminal domain-like
1 1 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 63380 Riboflavin synthase domain-like
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 1 SCOP 48310 Aldehyde ferredoxin oxidoreductase, C-terminal domains
1 1 1 0 SCOP 81631 PAP/OAS1 substrate-binding domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
1 1 1 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
1 1 1 0 SCOP 54768 dsRNA-binding domain-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 1 SCOP 158702 Sec63 N-terminal domain-like
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
1 1 1 0 SCOP 101852 Bacterial fluorinating enzyme, C-terminal domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 102522 Bacterial fluorinating enzyme, N-terminal domain
1 1 1 0 SCOP 158573 GINS helical bundle-like
1 1 1 0 SCOP 116846 MIT domain
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
1 1 1 0 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 1 SCOP 56228 Aldehyde ferredoxin oxidoreductase, N-terminal domain
1 1 1 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 1 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Ran binding protein zinc finger-like
SCOP superfamily ABC transporter transmembrane region
SCOP superfamily Doublecortin (DC)
SCOP superfamily Collagen-binding domain
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Multidrug efflux transporter AcrB transmembrane domain
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily C-terminal autoproteolytic domain of nucleoporin nup98
SCOP superfamily Double Clp-N motif
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily E set domains
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Integrin alpha N-terminal domain
SCOP superfamily Phage tail proteins
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily Phase 1 flagellin
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Cysteine-rich domain
SCOP superfamily ArfGap/RecO-like zinc finger
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Rubredoxin-like
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily OMPA-like
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Translation initiation factor IF3, C-terminal domain
SCOP superfamily Nucleotide cyclase
SCOP superfamily His-Me finger endonucleases
SCOP superfamily Nitrogenase accessory factor-like
SCOP superfamily Lumazine synthase
SCOP superfamily SpoIIaa-like
SCOP superfamily MurCD N-terminal domain
SCOP superfamily Urease, beta-subunit
SCOP superfamily RCC1/BLIP-II
SCOP superfamily Concanavalin A-like lectins/glucanases
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily Multiheme cytochromes
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily DNA repair protein MutS, domain III
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Transferrin receptor-like dimerisation domain
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Apolipoprotein
SCOP superfamily Spectrin repeat
SCOP superfamily Homeodomain-like
SCOP superfamily Zinc hairpin stack
SCOP superfamily YfgJ-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily Photosystem II reaction center protein J, PsbJ
SCOP superfamily MalF N-terminal region-like
SCOP superfamily PH0156-like
SCOP superfamily EreA/ChaN-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily DsbB-like
SCOP superfamily occludin/ELL-like
SCOP superfamily NOB1 zinc finger-like
SCOP superfamily Transposase IS200-like
SCOP superfamily AF2212/PG0164-like
SCOP superfamily RelB-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily YbeD/HP0495-like
SCOP superfamily eIF2alpha middle domain-like
SCOP superfamily Recombination protein RecR
SCOP superfamily ERO1-like
SCOP superfamily I/LWEQ domain
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily Sec-beta subunit
SCOP superfamily Holliday junction resolvase RusA
SCOP superfamily Formin homology 2 domain (FH2 domain)
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily N-terminal domain of adenylylcyclase associated protein, CAP
SCOP superfamily Kazal-type serine protease inhibitors

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