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Picea sitchensis superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea; Picea sitchensis

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 4688 total
2493 (53 %) with assignment
221 average length
52 % amino acid coverage
Domains: 2995 total
532 unique superfamilies
344 unique families
217 average length
5.6 average superfamily size
82 % formed by duplication
Domain combinations: 222 domain pairs
916 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

145 144 23 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
108 95 16 3 SCOP 52833 Thioredoxin-like
76 55 15 1 SCOP 54928 RNA-binding domain, RBD
75 73 15 7 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
75 75 4 6 SCOP 53474 alpha/beta-Hydrolases
57 54 9 7 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
49 49 9 2 SCOP 56112 Protein kinase-like (PK-like)
49 47 14 1 SCOP 57850 RING/U-box
40 32 7 1 SCOP 50129 GroES-like
39 39 5 2 SCOP 49764 HSP20-like chaperones
37 37 1 2 SCOP 51197 Clavaminate synthase-like
35 35 5 1 SCOP 47473 EF-hand
31 31 4 0 SCOP 46689 Homeodomain-like
31 31 2 1 SCOP 103511 Chlorophyll a-b binding protein
30 30 1 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
30 30 4 2 SCOP 47113 Histone-fold
27 27 6 3 SCOP 49899 Concanavalin A-like lectins/glucanases
26 14 3 1 SCOP 53901 Thiolase-like
25 25 1 1 SCOP 48113 Heme-dependent peroxidases
24 24 5 4 SCOP 56784 HAD-like
24 24 3 0 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
23 23 5 1 SCOP 47616 GST C-terminal domain-like
22 20 6 1 SCOP 48452 TPR-like
21 17 9 2 SCOP 50249 Nucleic acid-binding proteins
21 21 5 1 SCOP 55961 Bet v1-like
20 19 8 1 SCOP 46785 "Winged helix" DNA-binding domain
20 20 10 0 SCOP 81383 F-box domain
19 19 2 1 SCOP 81338 Aquaporin-like
19 19 4 0 SCOP 55008 HMA, heavy metal-associated domain
19 19 9 0 SCOP 46565 Chaperone J-domain
18 16 8 4 SCOP 51905 FAD/NAD(P)-binding domain
18 16 9 3 SCOP 54236 Ubiquitin-like
18 18 4 1 SCOP 50978 WD40 repeat-like
18 18 6 5 SCOP 51445 (Trans)glycosidases
18 18 5 0 SCOP 52058 L domain-like
18 18 2 1 SCOP 48264 Cytochrome P450
17 8 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
17 16 3 3 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
17 17 3 0 SCOP 52266 SGNH hydrolase
17 17 4 1 SCOP 53955 Lysozyme-like
16 10 7 2 SCOP 53067 Actin-like ATPase domain
16 16 6 4 SCOP 52096 ClpP/crotonase
16 16 4 1 SCOP 54495 UBC-like
16 16 2 0 SCOP 55455 SRF-like
15 15 1 0 SCOP 141562 At5g01610-like
14 14 7 1 SCOP 50104 Translation proteins SH3-like domain
14 14 3 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
14 12 5 1 SCOP 54534 FKBP-like
14 11 4 1 SCOP 49503 Cupredoxins
14 14 3 1 SCOP 54171 DNA-binding domain
13 13 2 3 SCOP 53383 PLP-dependent transferases
13 12 4 0 SCOP 48371 ARM repeat
13 13 2 1 SCOP 50182 Sm-like ribonucleoproteins
13 13 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
13 12 4 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
13 13 3 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
13 13 2 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
12 12 5 0 SCOP 58038 SNARE fusion complex
12 12 3 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
11 11 3 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
11 11 4 0 SCOP 103473 MFS general substrate transporter
11 9 5 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
11 11 4 4 SCOP 54001 Cysteine proteinases
11 11 3 3 SCOP 51182 RmlC-like cupins
11 8 5 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
11 7 6 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
11 6 4 0 SCOP 57756 Retrovirus zinc finger-like domains
10 10 5 2 SCOP 51569 Aldolase
10 10 3 3 SCOP 56300 Metallo-dependent phosphatases
10 10 4 1 SCOP 103506 Mitochondrial carrier
10 10 4 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
10 9 4 2 SCOP 50447 Translation proteins
10 8 3 0 SCOP 50370 Ricin B-like lectins
9 9 2 1 SCOP 81606 PP2C-like
9 8 6 2 SCOP 54211 Ribosomal protein S5 domain 2-like
9 9 2 1 SCOP 54292 2Fe-2S ferredoxin-like
9 9 5 1 SCOP 55811 Nudix
9 9 2 2 SCOP 64356 SNARE-like
9 9 5 0 SCOP 54427 NTF2-like
9 9 7 1 SCOP 48403 Ankyrin repeat
9 9 5 0 SCOP 52047 RNI-like
9 9 6 0 SCOP 54695 POZ domain
9 9 2 1 SCOP 117070 LEA14-like
9 8 5 0 SCOP 57667 beta-beta-alpha zinc fingers
8 8 2 1 SCOP 55315 L30e-like
8 7 4 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
8 7 4 0 SCOP 49785 Galactose-binding domain-like
8 8 2 1 SCOP 55724 Mog1p/PsbP-like
8 5 5 1 SCOP 55021 ACT-like
8 8 3 0 SCOP 57903 FYVE/PHD zinc finger
8 7 7 0 SCOP 46934 UBA-like
8 5 3 0 SCOP 57889 Cysteine-rich domain
8 8 2 0 SCOP 57016 Plant lectins/antimicrobial peptides
7 6 4 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
7 7 2 2 SCOP 53720 ALDH-like
7 7 2 1 SCOP 56655 Carbohydrate phosphatase
7 7 2 1 SCOP 53254 Phosphoglycerate mutase-like
7 6 2 1 SCOP 51395 FMN-linked oxidoreductases
7 7 2 1 SCOP 55239 RuBisCO, small subunit
7 6 3 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
7 4 2 0 SCOP 54403 Cystatin/monellin
7 7 3 0 SCOP 117281 Kelch motif
7 7 4 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
7 7 2 1 SCOP 56327 LDH C-terminal domain-like
7 3 3 0 SCOP 90229 CCCH zinc finger
7 7 2 1 SCOP 101941 NAC domain
6 5 5 1 SCOP 52317 Class I glutamine amidotransferase-like
6 6 3 0 SCOP 52080 Ribosomal proteins L15p and L18e
6 6 1 0 SCOP 47336 ACP-like
6 6 2 2 SCOP 53098 Ribonuclease H-like
6 6 3 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
6 6 2 1 SCOP 50685 Barwin-like endoglucanases
6 6 3 2 SCOP 48576 Terpenoid synthases
6 6 4 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
6 6 3 1 SCOP 50891 Cyclophilin-like
6 6 2 0 SCOP 46579 Prefoldin
6 6 2 1 SCOP 50630 Acid proteases
6 4 3 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
6 6 3 0 SCOP 50814 Lipocalins
6 6 4 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
6 3 3 0 SCOP 90209 Ran binding protein zinc finger-like
6 5 4 0 SCOP 54768 dsRNA-binding domain-like
6 6 3 0 SCOP 54277 CAD & PB1 domains
6 6 3 0 SCOP 52087 CRAL/TRIO domain
5 5 2 2 SCOP 53613 Ribokinase-like
5 5 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
5 5 2 2 SCOP 51316 Mss4-like
5 5 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 4 0 SCOP 54862 4Fe-4S ferredoxins
5 5 2 1 SCOP 109604 HD-domain/PDEase-like
5 5 3 2 SCOP 46626 Cytochrome c
5 5 2 2 SCOP 51126 Pectin lyase-like
5 5 2 0 SCOP 47072 Cysteine alpha-hairpin motif
5 4 3 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
5 5 2 0 SCOP 49879 SMAD/FHA domain
5 5 2 2 SCOP 54518 Tubby C-terminal domain-like
5 4 4 0 SCOP 88697 PUA domain-like
5 5 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
5 5 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
5 5 1 1 SCOP 51011 Glycosyl hydrolase domain
5 5 2 0 SCOP 46938 CRAL/TRIO N-terminal domain
5 4 2 0 SCOP 118310 AN1-like Zinc finger
5 5 4 1 SCOP 74788 Cullin repeat-like
5 5 2 0 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
5 3 3 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
5 3 3 0 SCOP 47862 Saposin
5 5 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
4 4 2 1 SCOP 53271 PRTase-like
4 4 2 0 SCOP 57829 Zn-binding ribosomal proteins
4 4 2 2 SCOP 51366 Ribulose-phoshate binding barrel
4 4 2 0 SCOP 54843 Ribosomal protein L22
4 4 3 1 SCOP 53137 Translational machinery components
4 4 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
4 4 1 1 SCOP 52218 Flavoproteins
4 4 3 1 SCOP 100950 NagB/RpiA/CoA transferase-like
4 4 2 3 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
4 2 1 0 SCOP 81333 F1F0 ATP synthase subunit C
4 4 2 1 SCOP 55068 Peptide methionine sulfoxide reductase
4 4 2 0 SCOP 82657 BolA-like
4 4 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
4 4 3 0 SCOP 54995 Ribosomal protein S6
4 4 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
4 4 2 0 SCOP 63829 Calcium-dependent phosphotriesterase
4 4 3 0 SCOP 47095 HMG-box
4 4 1 1 SCOP 55753 Actin depolymerizing proteins
4 4 1 1 SCOP 74650 Galactose mutarotase-like
4 4 2 1 SCOP 56317 Carbon-nitrogen hydrolase
4 4 2 1 SCOP 53056 beta-carbonic anhydrase, cab
4 4 4 0 SCOP 144091 Rhomboid-like
4 4 3 0 SCOP 54631 CBS-domain pair
4 4 2 1 SCOP 50022 ISP domain
4 4 2 0 SCOP 81901 HCP-like
4 3 2 0 SCOP 69065 RNase III domain-like
4 3 3 0 SCOP 82153 FAS1 domain
4 2 1 0 SCOP 75005 Arabinanase/levansucrase/invertase
4 2 1 0 SCOP 47592 SWIB/MDM2 domain
4 4 3 1 SCOP 82704 AlbA-like
4 4 4 0 SCOP 50156 PDZ domain-like
4 4 3 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 3 2 0 SCOP 54106 LysM domain
4 4 2 1 SCOP 140990 FtsH protease domain-like
4 4 2 1 SCOP 49870 Osmotin, thaumatin-like protein
4 4 2 0 SCOP 51101 Mannose-binding lectins
4 4 2 2 SCOP 54373 FAD-linked reductases, C-terminal domain
4 2 2 1 SCOP 56053 Ribosomal protein L6
4 4 2 0 SCOP 117892 Band 7/SPFH domain
4 4 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
4 3 2 0 SCOP 117839 WWE domain
4 4 1 0 SCOP 49590 PHL pollen allergen
3 2 2 1 SCOP 53927 Cytidine deaminase-like
3 3 2 1 SCOP 54197 HIT-like
3 3 1 1 SCOP 56047 Ribosomal protein S8
3 3 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
3 3 3 0 SCOP 55174 Alpha-L RNA-binding motif
3 3 3 1 SCOP 75217 alpha/beta knot
3 3 2 1 SCOP 55194 Ribosome recycling factor, RRF
3 3 2 1 SCOP 51161 Trimeric LpxA-like enzymes
3 3 2 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 1 SCOP 102114 Radical SAM enzymes
3 3 3 2 SCOP 53187 Zn-dependent exopeptidases
3 3 1 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
3 3 1 1 SCOP 56634 Heme-dependent catalase-like
3 3 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
3 3 2 1 SCOP 49329 Cu,Zn superoxide dismutase-like
3 3 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 2 0 SCOP 47694 Cytochrome c oxidase subunit h
3 3 2 1 SCOP 52151 FabD/lysophospholipase-like
3 3 1 0 SCOP 50090 Electron transport accessory proteins
3 3 2 0 SCOP 141571 Pentapeptide repeat-like
3 3 2 0 SCOP 102712 JAB1/MPN domain
3 3 1 1 SCOP 54909 Dimeric alpha+beta barrel
3 3 1 1 SCOP 55797 PR-1-like
3 3 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
3 3 3 0 SCOP 57802 Rubredoxin-like
3 3 3 0 SCOP 82199 SET domain
3 3 2 0 SCOP 49452 Starch-binding domain-like
3 3 3 0 SCOP 55136 Probable bacterial effector-binding domain
3 3 2 1 SCOP 52490 Tubulin nucleotide-binding domain-like
3 3 2 0 SCOP 52777 CoA-dependent acyltransferases
3 2 2 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
3 3 3 1 SCOP 48592 GroEL equatorial domain-like
3 3 2 2 SCOP 50729 PH domain-like
3 3 2 0 SCOP 56176 FAD-binding/transporter-associated domain-like
3 3 2 0 SCOP 47661 t-snare proteins
3 3 1 1 SCOP 52922 TK C-terminal domain-like
3 3 3 1 SCOP 52029 GroEL apical domain-like
3 3 3 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
3 3 2 0 SCOP 49354 PapD-like
3 2 2 0 SCOP 47954 Cyclin-like
3 3 3 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
3 1 1 1 SCOP 53738 Phosphoglucomutase, first 3 domains
3 3 2 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
3 3 1 1 SCOP 48445 14-3-3 protein
3 2 2 0 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
3 3 3 0 SCOP 48464 ENTH/VHS domain
3 3 3 1 SCOP 49599 TRAF domain-like
3 3 2 0 SCOP 57959 Leucine zipper domain
3 3 2 0 SCOP 57095 Scorpion toxin-like
3 3 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
3 3 3 0 SCOP 54849 GroEL-intermediate domain like
2 2 2 2 SCOP 51556 Metallo-dependent hydrolases
2 2 2 0 SCOP 48013 NusB-like
2 2 2 1 SCOP 56808 Ribosomal protein L1
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 0 SCOP 52374 Nucleotidylyl transferase
2 2 2 1 SCOP 54999 Ribosomal protein S10
2 2 2 1 SCOP 52166 Ribosomal protein L4
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
2 2 1 0 SCOP 143800 L28p-like
2 2 2 1 SCOP 53748 Phosphoglycerate kinase
2 2 1 1 SCOP 82649 SufE/NifU
2 2 1 0 SCOP 46992 Ribosomal protein S20
2 2 2 1 SCOP 53850 Periplasmic binding protein-like II
2 2 1 0 SCOP 54565 Ribosomal protein S16
2 2 2 2 SCOP 48557 L-aspartase-like
2 2 1 1 SCOP 52121 Lumazine synthase
2 2 1 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 1 1 SCOP 51419 PLP-binding barrel
2 2 2 0 SCOP 52949 Macro domain-like
2 2 1 0 SCOP 144122 Tim10-like
2 2 1 0 SCOP 56672 DNA/RNA polymerases
2 2 2 0 SCOP 54648 DLC
2 2 2 0 SCOP 53649 Alkaline phosphatase-like
2 2 2 0 SCOP 47027 Acyl-CoA binding protein
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 1 SCOP 55144 LigT-like
2 2 1 1 SCOP 54506 Diaminopimelate epimerase-like
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 1 SCOP 48208 Six-hairpin glycosidases
2 2 1 1 SCOP 49777 PEBP-like
2 2 2 1 SCOP 55159 eIF1-like
2 2 1 1 SCOP 55418 eIF4e-like
2 2 1 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 1 1 SCOP 55909 Pentein
2 2 2 0 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
2 2 2 0 SCOP 52091 SpoIIaa-like
2 2 2 1 SCOP 50494 Trypsin-like serine proteases
2 2 2 1 SCOP 52016 LeuD/IlvD-like
2 2 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 158615 RbcX-like
2 2 1 0 SCOP 103256 Hypothetical protein TM0160
2 2 1 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
2 2 2 0 SCOP 81301 Nucleotidyltransferase
2 2 1 0 SCOP 53300 vWA-like
2 2 1 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
2 2 2 0 SCOP 50800 PK beta-barrel domain-like
2 2 2 0 SCOP 56219 DNase I-like
2 2 1 0 SCOP 158997 Trm112p-like
2 2 1 1 SCOP 53213 LigB-like
2 2 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
2 2 2 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
2 2 1 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 1 1 0 SCOP 56024 Phospholipase D/nuclease
2 2 2 0 SCOP 82171 DPP6 N-terminal domain-like
2 2 2 0 SCOP 54626 Chalcone isomerase
2 2 1 1 SCOP 102198 Putative cyclase
2 2 1 1 SCOP 74784 Translin
2 2 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 2 0 SCOP 90123 ABC transporter transmembrane region
2 1 1 1 SCOP 55979 DNA clamp
2 2 2 0 SCOP 52200 Toll/Interleukin receptor TIR domain
2 2 1 0 SCOP 50405 Actin-crosslinking proteins
2 2 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
2 2 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
2 2 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
2 2 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
2 2 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 1 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 1 1 SCOP 55637 Cell cycle regulatory proteins
2 2 1 0 SCOP 63748 Tudor/PWWP/MBT
2 2 2 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
2 2 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 1 1 SCOP 47874 Annexin
2 2 2 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
2 2 1 0 SCOP 47769 SAM/Pointed domain
2 2 2 0 SCOP 52025 PA domain
2 2 2 0 SCOP 110942 HSP90 C-terminal domain
2 2 1 0 SCOP 140111 Endosomal sorting complex assembly domain
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 1 0 SCOP 109715 DEK C-terminal domain
2 2 1 1 SCOP 81382 Skp1 dimerisation domain-like
2 2 1 1 SCOP 63887 P-domain of calnexin/calreticulin
2 2 2 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
2 2 1 0 SCOP 140383 BSD domain-like
2 2 2 0 SCOP 89009 GAT-like domain
2 2 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 53167 Purine and uridine phosphorylases
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 0 SCOP 47973 Ribosomal protein S7
1 1 1 1 SCOP 53697 SIS domain
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 55120 Pseudouridine synthase
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 103657 BAR/IMD domain-like
1 1 1 1 SCOP 53784 Phosphofructokinase
1 1 1 1 SCOP 47240 Ferritin-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 0 SCOP 52980 Restriction endonuclease-like
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 53633 Carbamate kinase-like
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 55681 Class II aaRS and biotin synthetases
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 0 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 55205 EPT/RTPC-like
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 1 SCOP 50475 FMN-binding split barrel
1 1 1 1 SCOP 56801 Acetyl-CoA synthetase-like
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 81296 E set domains
1 1 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
1 1 1 0 SCOP 88723 PIN domain-like
1 1 1 1 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 55248 PCD-like
1 1 1 0 SCOP 144000 Oxysterol-binding protein-like
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 54897 Protease propeptides/inhibitors
1 1 1 0 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 1 SCOP 48439 Protein prenylyltransferase
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 143113 NAP-like
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 1 SCOP 55770 Profilin (actin-binding protein)
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 64268 PX domain
1 1 1 1 SCOP 47576 Calponin-homology domain, CH-domain
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 53800 Chelatase
1 1 1 1 SCOP 101960 Stabilizer of iron transporter SufD
1 1 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
1 1 1 0 SCOP 141734 HisI-like
1 1 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
1 1 1 0 SCOP 103451 PetN subunit of the cytochrome b6f complex
1 1 1 0 SCOP 46458 Globin-like
1 1 1 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
1 1 1 1 SCOP 64234 Photosystem I subunit PsaD
1 1 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
1 1 1 0 SCOP 161021 Photosystem II reaction center protein J, PsbJ
1 1 1 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 52172 CheY-like
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 51069 Carbonic anhydrase
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 0 SCOP 111352 Ammonium transporter
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 57783 Zinc beta-ribbon
1 1 1 0 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
1 1 1 0 SCOP 51230 Single hybrid motif
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 51206 cAMP-binding domain-like
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 1 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 1 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
1 1 1 0 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
1 1 1 0 SCOP 69322 Tricorn protease domain 2
1 1 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
1 1 1 0 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 1 SCOP 89562 RraA-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 1 SCOP 54984 eEF-1beta-like
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 102462 Peptidyl-tRNA hydrolase II
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
1 1 1 0 SCOP 52743 Subtilisin-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 48019 post-AAA+ oligomerization domain-like
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 50965 Galactose oxidase, central domain
1 1 1 0 SCOP 52129 Caspase-like
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 160059 PriA/YqbF domain
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 52210 Succinyl-CoA synthetase domains
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 0 SCOP 141673 MOSC N-terminal domain-like
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 68906 SAP domain
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 1 SCOP 63380 Riboflavin synthase domain-like
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 144232 HIT/MYND zinc finger-like
1 1 1 0 SCOP 54160 Chromo domain-like
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 1 SCOP 141493 Allene oxide cyclase-like
1 1 1 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
1 1 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 82708 R3H domain
1 1 1 0 SCOP 81271 TGS-like
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 1 SCOP 101152 Mob1/phocein
1 1 1 0 SCOP 46774 ARID-like
1 1 1 0 SCOP 158573 GINS helical bundle-like
1 1 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
1 1 1 0 SCOP 57196 EGF/Laminin
1 1 1 1 SCOP 82109 MIR domain
1 1 1 0 SCOP 101447 Formin homology 2 domain (FH2 domain)
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 158639 ENT-like
1 1 1 0 SCOP 116846 MIT domain
1 1 1 1 SCOP 143875 ERH-like
1 1 1 0 SCOP 63491 BAG domain
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 57277 Granulin repeat
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 118290 WRKY DNA-binding domain
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
1 1 1 0 SCOP 57424 LDL receptor-like module
1 1 1 0 SCOP 46942 Elongation factor TFIIS domain 2
1 1 1 0 SCOP 143503 PUG domain-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 103612 SBT domain
1 1 1 0 SCOP 144256 TSP9-like
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 101238 XPC-binding domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Somatomedin B domain
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Multidrug efflux transporter AcrB transmembrane domain
SCOP superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SCOP superfamily Swiveling domain of dehydratase reactivase alpha subunit
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily Calcium ATPase, transmembrane domain M
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Clc chloride channel
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Voltage-gated potassium channels
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Cullin homology domain
SCOP superfamily Release factor
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Integrin alpha N-terminal domain
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily AhpD-like
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily Undecaprenyl diphosphate synthase
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Tropomyosin
SCOP superfamily Metallothionein
SCOP superfamily B-box zinc-binding domain
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Kringle-like
SCOP superfamily PMP inhibitors
SCOP superfamily Growth factor receptor domain
SCOP superfamily Insulin-like
SCOP superfamily Porins
SCOP superfamily Conserved core of transcriptional regulatory protein vp16
SCOP superfamily The spindle assembly checkpoint protein mad2
SCOP superfamily Metalloproteases ("zincins"), catalytic domain
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily Nicotinate/Quinolinate PRTase N-terminal domain-like
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily RNase A-like
SCOP superfamily Fe-only hydrogenase
SCOP superfamily Dihydrofolate reductase-like
SCOP superfamily MurD-like peptide ligases, peptide-binding domain
SCOP superfamily FAD-linked oxidoreductase
SCOP superfamily RuBisCo, C-terminal domain
SCOP superfamily Agglutinin
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily FinO-like
SCOP superfamily An anticodon-binding domain of class I aminoacyl-tRNA synthetases
SCOP superfamily Regulator of G-protein signaling, RGS
SCOP superfamily Apolipophorin-III
SCOP superfamily Signal peptide-binding domain
SCOP superfamily ROP protein
SCOP superfamily Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SCOP superfamily Apolipoprotein
SCOP superfamily Kix domain of CBP (creb binding protein)
SCOP superfamily Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SCOP superfamily Spectrin repeat
SCOP superfamily Putative DNA-binding domain
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily HR1 repeat
SCOP superfamily RILP dimerisation region
SCOP superfamily Zinc hairpin stack
SCOP superfamily T-antigen specific domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily Photosystem II 10 kDa phosphoprotein PsbH
SCOP superfamily gpW/gp25-like
SCOP superfamily BT0923-like
SCOP superfamily BH3980-like
SCOP superfamily ORC1-binding domain
SCOP superfamily Rv2632c-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily Hermes dimerisation domain
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily ISY1 domain-like
SCOP superfamily Synuclein
SCOP superfamily CRISPR-associated protein
SCOP superfamily Putative glucosidase YicI, C-terminal domain
SCOP superfamily RNA-binding protein She2p
SCOP superfamily XseB-like
SCOP superfamily OmpH-like
SCOP superfamily QueA-like
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily PetL subunit of the cytochrome b6f complex
SCOP superfamily KA1-like
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily Obg GTP-binding protein C-terminal domain
SCOP superfamily N-terminal domain of adenylylcyclase associated protein, CAP
SCOP superfamily Plant proteinase inhibitors
SCOP superfamily Kazal-type serine protease inhibitors

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