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  Home > Genomes > Family assignments for Saccharomyces cerevisiae CLIB215


Saccharomyces cerevisiae CLIB215 family assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; Saccharomyces cerevisiae CLIB215

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 5051 total
2674 (53 %) with assignment
381 average length
39 % amino acid coverage
Domains: 3666 total
700 unique superfamilies
562 unique families
282 average length
5.2 average superfamily size
81 % formed by duplication
Domain combinations: 412 domain pairs
1298 unique architectures

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Family assignments

Domains

Proteins

SCOP link

Families
57 57 SCOP 88854 Protein kinases, catalytic subunit
39 39 SCOP 52592 G proteins
24 21 SCOP 81269 Extended AAA-ATPase domain
23 19 SCOP 81268 Tandem AAA-ATPase domain
21 11 SCOP 53068 Actin/HSP70
15 12 SCOP 52686 ABC transporter ATPase domain-like
13 13 SCOP 54496 UBC-related
13 13 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
12 12 SCOP 56251 Proteasome subunits
11 10 SCOP 50979 WD40-repeat
11 11 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
10 10 SCOP 56310 Protein serine/threonine phosphatase
9 9 SCOP 47114 Nucleosome core histones
8 4 SCOP 53083 Hexokinase
7 7 SCOP 50892 Cyclophilin (peptidylprolyl isomerase)
7 7 SCOP 52318 Class I glutamine amidotransferases (GAT)
7 7 SCOP 53384 AAT-like
7 7 SCOP 53402 Cystathionine synthase-like
7 7 SCOP 53660 Dimeric isocitrate & isopropylmalate dehydrogenases
7 7 SCOP 55730 N-acetyl transferase, NAT
6 6 SCOP 51431 Aldo-keto reductases (NADP)
6 6 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
6 6 SCOP 52541 Nucleotide and nucleoside kinases
6 6 SCOP 52641 Motor proteins
6 6 SCOP 53687 Tryptophan synthase beta subunit-like PLP-dependent enzymes
6 6 SCOP 53721 ALDH-like
6 2 SCOP 55974 S-adenosylmethionine synthetase
6 3 SCOP 63412 MPP-like
6 6 SCOP 82568 Ubiquitin carboxyl-terminal hydrolase, UCH
6 6 SCOP 102609 Glycolipid 2-alpha-mannosyltransferase
5 5 SCOP 48453 Tetratricopeptide repeat (TPR)
5 5 SCOP 50282 Cold shock DNA-binding domain-like
5 5 SCOP 51736 Alcohol dehydrogenase-like, C-terminal domain
5 5 SCOP 52652 Nitrogenase iron protein-like
5 2 SCOP 52849 PDI-like
5 2 SCOP 53739 Phosphoglucomutase, first 3 domains
5 5 SCOP 54535 FKBP immunophilin/proline isomerase
5 5 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
5 3 SCOP 109692 Vacuolar sorting protein domain
4 4 SCOP 46690 Homeodomain
4 2 SCOP 49494 HSP40/DnaJ peptide-binding domain
4 4 SCOP 50646 Pepsin-like
4 4 SCOP 51605 Enolase
4 3 SCOP 51751 Tyrosine-dependent oxidoreductases
4 4 SCOP 51830 Formate/glycerate dehydrogenases, NAD-domain
4 4 SCOP 52403 N-type ATP pyrophosphatases
4 4 SCOP 52744 Subtilases
4 4 SCOP 52901 Glutathione peroxidase-like
4 4 SCOP 53272 Phosphoribosyltransferases (PRTases)
4 4 SCOP 53417 GABA-aminotransferase-like
4 4 SCOP 54237 Ubiquitin-related
4 4 SCOP 54431 NTF2-like
4 4 SCOP 54827 Enolase N-terminal domain-like
4 4 SCOP 55921 Creatinase/aminopeptidase
4 4 SCOP 56067 BC ATP-binding domain-like
4 4 SCOP 56236 Class II glutamine amidotransferases
4 4 SCOP 56802 Acetyl-CoA synthetase-like
4 4 SCOP 74771 Clathrin adaptor core protein
4 4 SCOP 88724 Pyruvate oxidase and decarboxylase Pyr module
4 4 SCOP 88749 Pyruvate oxidase and decarboxylase PP module
4 4 SCOP 89494 HMGL-like
4 4 SCOP 100908 MIF4G domain-like
4 4 SCOP 103507 Mitochondrial carrier
3 3 SCOP 47502 Calmodulin-like
3 3 SCOP 47617 Glutathione S-transferase (GST), C-terminal domain
3 3 SCOP 47662 t-snare proteins
3 3 SCOP 48020 DNA polymerase III clamp loader subunits, C-terminal domain
3 3 SCOP 48246 Protein prenyltransferases
3 3 SCOP 48257 Citrate synthase
3 3 SCOP 48372 Armadillo repeat
3 3 SCOP 50448 Elongation factors
3 3 SCOP 51396 FMN-linked oxidoreductases
3 3 SCOP 51487 beta-glycanases
3 3 SCOP 51557 Adenosine/AMP deaminase
3 3 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
3 3 SCOP 51943 FAD/NAD-linked reductases, N-terminal and central domains
3 3 SCOP 52325 DJ-1/PfpI
3 3 SCOP 52441 BC N-terminal domain-like
3 3 SCOP 52475 Pyruvate oxidase and decarboxylase, middle domain
3 3 SCOP 52589 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain
3 3 SCOP 52773 Histone deacetylase, HDAC
3 3 SCOP 53255 Cofactor-dependent phosphoglycerate mutase
3 3 SCOP 53296 Phosphoribosylpyrophosphate synthetase-like
3 3 SCOP 53620 Thiamin biosynthesis kinases
3 3 SCOP 53698 double-SIS domain
3 3 SCOP 53733 Aconitase iron-sulfur domain
3 2 SCOP 53902 Thiolase-related
3 2 SCOP 54929 Canonical RBD
3 3 SCOP 55283 Ribosomal protein L5
3 2 SCOP 55327 PurM N-terminal domain-like
3 3 SCOP 55348 GAPDH-like
3 2 SCOP 56043 PurM C-terminal domain-like
3 3 SCOP 56656 Inositol monophosphatase/fructose-1,6-bisphosphatase-like
3 3 SCOP 58039 SNARE fusion complex
3 3 SCOP 63984 Sir2 family of transcriptional regulators
3 3 SCOP 74911 Aldose 1-epimerase (mutarotase)
3 3 SCOP 75521 Clathrin coat assembly domain
3 3 SCOP 89125 Nop domain
3 2 SCOP 143927 beta-CASP RNA-metabolising hydrolases
3 3 SCOP 144001 Oxysterol-binding protein
2 2 SCOP 46627 monodomain cytochrome c
2 1 SCOP 46753 DNA-binding domain of rap1
2 2 SCOP 46939 CRAL/TRIO N-terminal domain
2 2 SCOP 47096 HMG-box
2 2 SCOP 47253 Ribonucleotide reductase-like
2 2 SCOP 47918 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 SCOP 48404 Ankyrin repeat
2 2 SCOP 48426 Sec7 domain
2 2 SCOP 48558 L-aspartase/fumarase
2 2 SCOP 48577 Isoprenyl diphosphate synthases
2 2 SCOP 49330 Cu,Zn superoxide dismutase-like
2 2 SCOP 49448 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
2 1 SCOP 49885 FHA domain
2 2 SCOP 50136 Alcohol dehydrogenase-like, N-terminal domain
2 2 SCOP 50194 Ribosomal protein L14
2 2 SCOP 50263 Single strand DNA-binding domain, SSB
2 2 SCOP 50325 Inorganic pyrophosphatase
2 2 SCOP 50461 Ribosomal protein L3
2 2 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 SCOP 50678 ValRS/IleRS/LeuRS editing domain
2 2 SCOP 50785 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 SCOP 50801 Pyruvate kinase beta-barrel domain
2 2 SCOP 51231 Biotinyl/lipoyl-carrier proteins and domains
2 2 SCOP 51446 Amylase, catalytic domain
2 2 SCOP 51534 Type II chitinase
2 2 SCOP 51599 Class I DAHP synthetase
2 2 SCOP 51622 Pyruvate kinase
2 2 SCOP 51848 LDH N-terminal domain-like
2 2 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
2 2 SCOP 52017 LeuD-like
2 2 SCOP 52088 CRAL/TRIO domain
2 2 SCOP 52167 Ribosomal protein L4
2 2 SCOP 52284 Formate/glycerate dehydrogenases, substrate-binding domain
2 2 SCOP 52314 Ribosomal protein S2
2 2 SCOP 52397 Adenylyltransferase
2 2 SCOP 52432 ETFP subunits
2 2 SCOP 52491 Tubulin, GTPase domain
2 2 SCOP 52508 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 SCOP 52670 RecA protein-like (ATPase-domain)
2 2 SCOP 52778 CAT-like
2 2 SCOP 52936 Pyruvate kinase, C-terminal domain
2 2 SCOP 53118 DnaQ-like 3'-5' exonuclease
2 2 SCOP 53143 ERF1/Dom34 middle domain-like
2 2 SCOP 53204 Bacterial dinuclear zinc exopeptidases
2 2 SCOP 53235 Tetrahydrofolate dehydrogenase/cyclohydrolase
2 2 SCOP 53258 Histidine acid phosphatase
2 2 SCOP 53461 UDP-glucose pyrophosphorylase
2 2 SCOP 53499 Serine carboxypeptidase-like
2 2 SCOP 53614 Ribokinase-like
2 1 SCOP 53785 Phosphofructokinase
2 2 SCOP 54193 L15e
2 1 SCOP 54207 Hexose-1-phosphate uridylyltransferase
2 2 SCOP 54229 Ribonuclease PH domain 1-like
2 2 SCOP 54232 GHMP Kinase, N-terminal domain
2 1 SCOP 54594 Glyoxalase I (lactoylglutathione lyase)
2 2 SCOP 54696 BTB/POZ domain
2 2 SCOP 54748 Ribosomal L11/L12e N-terminal domain
2 2 SCOP 54792 Eukaryotic type KH-domain (KH-domain type I)
2 2 SCOP 55009 HMA, heavy metal-associated domain
2 2 SCOP 55299 YjgF/L-PSP
2 2 SCOP 55323 ERF1/Dom34 C-terminal domain-like
2 2 SCOP 55376 Glucose 6-phosphate dehydrogenase-like
2 2 SCOP 55456 SRF-like
2 1 SCOP 55614 Intein endonuclease
2 1 SCOP 55748 N-myristoyl transferase, NMT
2 2 SCOP 55798 PR-1-like
2 2 SCOP 55875 Heat shock protein 90, HSP90, N-terminal domain
2 1 SCOP 55946 TATA-box binding protein (TBP), C-terminal domain
2 1 SCOP 55983 DNA polymerase processivity factor
2 1 SCOP 56015 Nitrite and sulphite reductase 4Fe-4S domain-like
2 2 SCOP 56048 Ribosomal protein S8
2 2 SCOP 56171 Phoshoinositide 3-kinase (PI3K), catalytic domain
2 2 SCOP 56205 Hect, E3 ligase catalytic domain
2 2 SCOP 56288 Glyoxalase II (hydroxyacylglutathione hydrolase)
2 2 SCOP 56323 ADC synthase
2 2 SCOP 56635 Heme-dependent catalases
2 2 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 SCOP 57799 Casein kinase II beta subunit
2 2 SCOP 57869 Metallothionein
2 2 SCOP 57960 Leucine zipper domain
2 2 SCOP 63611 Pumilio repeat
2 2 SCOP 63971 Inosicase
2 2 SCOP 64198 AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC
2 2 SCOP 64422 Inositol polyphosphate 5-phosphatase (IPP5)
2 2 SCOP 64490 RNA-polymerase beta-prime
2 2 SCOP 69557 Spermidine synthase
2 2 SCOP 69646 Arp2/3 complex subunits
2 1 SCOP 69815 Tyrosyl-DNA phosphodiesterase TDP1
2 1 SCOP 74656 CoA transferase alpha subunit-like
2 2 SCOP 75633 Cullin homology domain
2 2 SCOP 81605 PP2C-like
2 2 SCOP 81812 Helical domain of Sec23/24
2 2 SCOP 81996 beta-sandwich domain of Sec23/24
2 2 SCOP 82062 BAH domain
2 2 SCOP 82172 DPP6 N-terminal domain-like
2 1 SCOP 82424 Choline/Carnitine O-acyltransferase
2 2 SCOP 82458 Trunk domain of Sec23/24
2 2 SCOP 82497 DPP6 catalytic domain-like
2 2 SCOP 82515 PfkB-like kinase
2 2 SCOP 82755 C-terminal, gelsolin-like domain of Sec23/24
2 2 SCOP 82920 Zn-finger domain of Sec23/24
2 2 SCOP 88784 rRNA adenine dimethylase-like
2 2 SCOP 89763 Ubiquitin activating enzymes (UBA)
2 2 SCOP 101153 Mob1/phocein
2 2 SCOP 101490 Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
2 1 SCOP 101588 Allantoicase repeat
2 2 SCOP 102755 Hsp90 middle domain
2 2 SCOP 102928 NifU/IscU domain
2 2 SCOP 103492 Preprotein translocase SecY subunit
2 1 SCOP 110384 Cobalamin-independent methionine synthase
2 2 SCOP 110509 NLI interacting factor-like phosphatase
2 2 SCOP 111353 Ammonium transporter
2 2 SCOP 140851 Exocyst complex component
2 2 SCOP 141755 PdxS-like
2 2 SCOP 142721 PyrH-like
2 2 SCOP 158886 AMPK-beta glycogen binding domain-like
1 1 SCOP 46549 Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
1 1 SCOP 46676 Cytochrome bc1 domain
1 1 SCOP 46873 Heat-shock transcription factor
1 1 SCOP 46925 RNA polymerase subunit RPB10
1 1 SCOP 46989 Tubulin chaperone cofactor A
1 1 SCOP 47230 Phosphorelay protein-like
1 1 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
1 1 SCOP 47371 Bromodomain
1 1 SCOP 47397 Transcription factor IIA (TFIIA), alpha-helical domain
1 1 SCOP 47460 HLH, helix-loop-helix DNA-binding domain
1 1 SCOP 47577 Calponin-homology domain, CH-domain
1 1 SCOP 47808 5' to 3' exonuclease, C-terminal subdomain
1 1 SCOP 47820 HRDC domain from helicases
1 1 SCOP 47939 Functional domain of the splicing factor Prp18
1 1 SCOP 47955 Cyclin
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48114 CCP-like
1 1 SCOP 48157 DNA repair glycosylase, 2 C-terminal domains
1 1 SCOP 48174 Cryptochrome/photolyase FAD-binding domain
1 1 SCOP 48180 Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
1 1 SCOP 48209 Glucoamylase
1 1 SCOP 48226 Class I alpha-1;2-mannosidase, catalytic domain
1 1 SCOP 48265 Cytochrome P450
1 1 SCOP 48367 Ras GEF
1 1 SCOP 48390 Clathrin heavy chain proximal leg segment
1 1 SCOP 48440 Protein prenylyltransferase
1 1 SCOP 48446 14-3-3 protein
1 1 SCOP 48465 ENTH domain
1 1 SCOP 48604 Allosteric chorismate mutase
1 1 SCOP 50023 Rieske iron-sulfur protein (ISP)
1 1 SCOP 50045 SH3-domain
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50183 Sm motif of small nuclear ribonucleoproteins, SNRNP
1 1 SCOP 50250 Anticodon-binding domain
1 1 SCOP 50307 DNA ligase/mRNA capping enzyme postcatalytic domain
1 1 SCOP 50321 RNA polymerase subunit RBP8
1 1 SCOP 50476 PNP-oxidase like
1 1 SCOP 50616 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 SCOP 50708 Cdc48 N-terminal domain-like
1 1 SCOP 50719 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain
1 1 SCOP 50764 Ran-binding domain
1 1 SCOP 51137 Galacturonase
1 1 SCOP 51191 Type I phosphomannose isomerase
1 1 SCOP 51210 cAMP-binding domain
1 1 SCOP 51284 dUTPase-like
1 1 SCOP 51298 Intein (protein splicing domain)
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51367 Histidine biosynthesis enzymes
1 1 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
1 1 SCOP 51375 Decarboxylase
1 1 SCOP 51381 Tryptophan biosynthesis enzymes
1 1 SCOP 51392 Thiamin phosphate synthase
1 1 SCOP 51413 Inosine monophosphate dehydrogenase (IMPDH)
1 1 SCOP 51420 Alanine racemase-like, N-terminal domain
1 1 SCOP 51427 "Hypothetical" protein ybl036c
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51591 Class II FBP aldolase
1 1 SCOP 51594 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
1 1 SCOP 51659 Endonuclease IV
1 1 SCOP 51691 NadC C-terminal domain-like
1 1 SCOP 51696 Mammalian PLC
1 1 SCOP 51718 Dihydropteroate synthetase
1 1 SCOP 51913 FAD-linked reductases, N-terminal domain
1 1 SCOP 51931 GDI-like N domain
1 1 SCOP 51934 Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
1 1 SCOP 52002 R1 subunit of ribonucleotide reductase, C-terminal domain
1 1 SCOP 52022 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 SCOP 52052 Rna1p (RanGAP1), N-terminal domain
1 1 SCOP 52081 Ribosomal proteins L15p and L18e
1 1 SCOP 52103 Crotonase-like
1 1 SCOP 52122 Lumazine synthase
1 1 SCOP 52142 Uracil-DNA glycosylase
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52256 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 SCOP 52300 S-adenosylhomocystein hydrolase
1 1 SCOP 52419 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 SCOP 52460 Eukaryotic glutathione synthetase, substrate-binding domain
1 1 SCOP 52471 C-terminal domain of the electron transfer flavoprotein alpha subunit
1 1 SCOP 52572 Adenosine-5'phosphosulfate kinase (APS kinase)
1 1 SCOP 52584 Phosphoribulokinase/pantothenate kinase
1 1 SCOP 52789 Low-molecular-weight phosphotyrosine protein phosphatases
1 1 SCOP 52800 Dual specificity phosphatase-like
1 1 SCOP 52805 Higher-molecular-weight phosphotyrosine protein phosphatases
1 1 SCOP 52862 Glutathione S-transferase (GST), N-terminal domain
1 1 SCOP 52895 spliceosomal protein U5-15Kd
1 1 SCOP 52923 Transketolase C-terminal domain-like
1 1 SCOP 52926 Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
1 1 SCOP 52944 ATP synthase (F1-ATPase), gamma subunit
1 1 SCOP 52973 ITPase (Ham1)
1 1 SCOP 53037 Eukaryotic RPB5 N-terminal domain
1 1 SCOP 53045 5' to 3' exonuclease catalytic domain
1 1 SCOP 53057 beta-carbonic anhydrase, cab
1 1 SCOP 53089 Glycerol kinase
1 1 SCOP 53099 Ribonuclease H
1 1 SCOP 53138 Ribosomal protein L18 and S11
1 1 SCOP 53168 Purine and uridine phosphorylases
1 1 SCOP 53267 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain
1 1 SCOP 53329 Formyltransferase
1 1 SCOP 53342 Fibrillarin homologue
1 1 SCOP 53351 Arginine methyltransferase
1 1 SCOP 53506 Gastric lipase
1 1 SCOP 53547 Carboxylesterase/thioesterase 1
1 1 SCOP 53591 Nucleoside hydrolase
1 1 SCOP 53598 Dihydrofolate reductases
1 1 SCOP 53629 Folylpolyglutamate synthetase
1 1 SCOP 53650 Alkaline phosphatase
1 1 SCOP 53672 Aspartate/ornithine carbamoyltransferase
1 1 SCOP 53701 Phosphoglucose isomerase, PGI
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53766 Oligosaccharide phosphorylase
1 1 SCOP 53775 Glutaminase/Asparaginase
1 1 SCOP 53791 Tetrapyrrole methylase
1 1 SCOP 53796 PEP carboxykinase C-terminal domain
1 1 SCOP 53928 Cytidine deaminase
1 1 SCOP 54002 Papain-like
1 1 SCOP 54050 Ubiquitin carboxyl-terminal hydrolase UCH-L
1 1 SCOP 54054 Adenain-like
1 1 SCOP 54253 GABARAP-like
1 1 SCOP 54399 GDI-like
1 1 SCOP 54586 Cdc48 domain 2-like
1 1 SCOP 54617 DNA-binding domain of Mlu1-box binding protein MBP1
1 1 SCOP 54632 CBS-domain pair
1 1 SCOP 54644 Acyl-CoA thioesterase
1 1 SCOP 54649 DLC
1 1 SCOP 54687 Ribosomal protein L10e
1 1 SCOP 54720 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 SCOP 54769 Double-stranded RNA-binding domain (dsRBD)
1 1 SCOP 54811 GMP synthetase C-terminal dimerisation domain
1 1 SCOP 54815 Prokaryotic type KH domain (KH-domain type II)
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 54985 eEF-1beta-like
1 1 SCOP 55004 Poly(A) polymerase, PAP, C-terminal domain
1 1 SCOP 55069 Peptide methionine sulfoxide reductase
1 1 SCOP 55160 eIF1-like
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55258 RNA polymerase alpha subunit dimerisation domain
1 1 SCOP 55288 RPB5
1 1 SCOP 55294 RPB6
1 1 SCOP 55308 Tubulin, C-terminal domain
1 1 SCOP 55316 L30e/L7ae ribosomal proteins
1 1 SCOP 55363 Homoserine dehydrogenase-like
1 1 SCOP 55368 Dihydrodipicolinate reductase-like
1 1 SCOP 55388 Frataxin-like
1 1 SCOP 55482 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 SCOP 55621 GTP cyclohydrolase I
1 1 SCOP 55662 N-terminal domain of RNase HI
1 1 SCOP 55725 Ran-binding protein mog1p
1 1 SCOP 55762 Cofilin-like
1 1 SCOP 55771 Profilin (actin-binding protein)
1 1 SCOP 55782 GAF domain
1 1 SCOP 55817 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 SCOP 55857 Cytochrome b5
1 1 SCOP 55879 DNA gyrase/MutL, N-terminal domain
1 1 SCOP 55896 Ribonuclease Rh-like
1 1 SCOP 55910 Ribosome anti-association factor eIF6 (aIF6)
1 1 SCOP 55958 Phosphoglucomutase, C-terminal domain
1 1 SCOP 56020 The spindle assembly checkpoint protein mad2
1 1 SCOP 56088 Eukaryotic glutathione synthetase ATP-binding domain
1 1 SCOP 56092 ATP-dependent DNA ligase catalytic domain
1 1 SCOP 56100 mRNA capping enzyme
1 1 SCOP 56105 SAICAR synthase
1 1 SCOP 56108 Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
1 1 SCOP 56307 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
1 1 SCOP 56318 Nitrilase
1 1 SCOP 56328 Lactate & malate dehydrogenases, C-terminal domain
1 1 SCOP 56361 Eukaryotic DNA topoisomerase I, catalytic core
1 1 SCOP 56426 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 SCOP 56530 FAH
1 1 SCOP 56554 Insert subdomain of RNA polymerase alpha subunit
1 1 SCOP 56673 DNA polymerase I
1 1 SCOP 56691 T7 RNA polymerase
1 1 SCOP 56720 Type II DNA topoisomerase
1 1 SCOP 56742 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 SCOP 56816 Sec1/munc18-like (SM) proteins
1 1 SCOP 56895 Aquaporin-like
1 1 SCOP 57784 Transcriptional factor domain
1 1 SCOP 57851 RING finger domain, C3HC4
1 1 SCOP 57904 FYVE, a phosphatidylinositol-3-phosphate binding domain
1 1 SCOP 57939 DnaJ/Hsp40 cysteine-rich domain
1 1 SCOP 63738 Leukotriene A4 hydrolase N-terminal domain
1 1 SCOP 63783 Riboflavin synthase
1 1 SCOP 63801 ATP sulfurylase N-terminal domain
1 1 SCOP 63863 Thiamin pyrophosphokinase, substrate-binding domain
1 1 SCOP 63917 Dihydroorotase
1 1 SCOP 63976 Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
1 1 SCOP 63979 ATP sulfurylase catalytic domain
1 1 SCOP 64000 Thiamin pyrophosphokinase, catalytic domain
1 1 SCOP 64011 ATP sulfurylase C-terminal domain
1 1 SCOP 64154 YjeF N-terminal domain-like
1 1 SCOP 64225 PB1 domain
1 1 SCOP 64269 PX domain
1 1 SCOP 64281 Mevalonate 5-diphosphate decarboxylase
1 1 SCOP 64311 RBP11/RpoL
1 1 SCOP 64338 Leukotriene A4 hydrolase catalytic domain
1 1 SCOP 64357 Synatpobrevin N-terminal domain
1 1 SCOP 64372 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
1 1 SCOP 64511 Phosphoserine phosphatase
1 1 SCOP 68924 PEP carboxykinase N-terminal domain
1 1 SCOP 69001 FAD-dependent thiol oxidase
1 1 SCOP 69044 RNA polymerase II subunit RBP4 (RpoF)
1 1 SCOP 69061 Arp2/3 complex 21 kDa subunit ARPC3
1 1 SCOP 69210 APC10-like
1 1 SCOP 69341 C-terminal domain of adenylylcyclase associated protein
1 1 SCOP 69501 DTD-like
1 1 SCOP 69565 Pyridoxal-dependent decarboxylase
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 69892 Iron-containing alcohol dehydrogenase
1 1 SCOP 74679 SCF ubiquitin ligase complex WHB domain
1 1 SCOP 74789 Cullin repeat
1 1 SCOP 74904 Lectin leg-like
1 1 SCOP 75073 Hydantoinase (dihydropyrimidinase), catalytic domain
1 1 SCOP 75110 Siroheme synthase N-terminal domain-like
1 1 SCOP 75273 Glycogenin
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 75600 acyl-CoA oxidase N-terminal domains
1 1 SCOP 75616 Siroheme synthase middle domains-like
1 1 SCOP 75621 Release factor
1 1 SCOP 75626 YebC-like
1 1 SCOP 81288 RhoGDI-like
1 1 SCOP 81380 Skp1 dimerisation domain-like
1 1 SCOP 81381 F-box domain
1 1 SCOP 81495 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 SCOP 81501 ISP transmembrane anchor
1 1 SCOP 81507 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 SCOP 81513 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 SCOP 81523 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 SCOP 81589 Poly(A) polymerase, PAP, N-terminal domain
1 1 SCOP 81630 Poly(A) polymerase, PAP, middle domain
1 1 SCOP 81843 Mannitol 2-dehydrogenase
1 1 SCOP 81992 DNA-binding domain from NDT80
1 1 SCOP 82115 ATP-dependent riboflavin kinase-like
1 1 SCOP 82191 Acireductone dioxygenase
1 1 SCOP 82258 SAH/MTA deaminase-like
1 1 SCOP 82388 Predicted hydrolases Cof
1 1 SCOP 82540 Trehalose-6-phosphate synthase, OtsA
1 1 SCOP 82583 G domain-linked domain
1 1 SCOP 82636 MaoC-like
1 1 SCOP 82767 Sedlin (SEDL)
1 1 SCOP 88683 Eukaryotic ODC-like
1 1 SCOP 88704 Phosphoenolpyruvate mutase/Isocitrate lyase-like
1 1 SCOP 88735 TK-like Pyr module
1 1 SCOP 88741 Branched-chain alpha-keto acid dehydrogenase Pyr module
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 88771 PFOR PP module
1 1 SCOP 88799 N-terminal, heterodimerisation domain of RBP7 (RpoE)
1 1 SCOP 89249 Proprotein convertase P-domain
1 1 SCOP 89503 Ketopantoate hydroxymethyltransferase PanB
1 1 SCOP 89590 NADPH-dependent FMN reductase
1 1 SCOP 89724 Macro domain
1 1 SCOP 89896 Hypothetical protein Yhr087W
1 1 SCOP 89943 eEF1-gamma domain
1 1 SCOP 89958 MTH1187-like
1 1 SCOP 89976 Hypothetical protein Yml108w
1 1 SCOP 90019 SRP alpha N-terminal domain-like
1 1 SCOP 90040 Choline kinase
1 1 SCOP 90097 Capz alpha-1 subunit
1 1 SCOP 90100 Capz beta-1 subunit
1 1 SCOP 90210 Ran binding protein zinc finger-like
1 1 SCOP 90243 Dimerization motif of sir4
1 1 SCOP 100880 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 SCOP 100888 Lesion bypass DNA polymerase (Y-family), catalytic domain
1 1 SCOP 100948 Isochorismatase-like hydrolases
1 1 SCOP 101239 XPC-binding domain
1 1 SCOP 101279 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101407 Mo25 protein
1 1 SCOP 101547 ASF1-like
1 1 SCOP 101836 Dcp1
1 1 SCOP 101884 Glycosyl hydrolases family 32 N-terminal domain
1 1 SCOP 102115 Biotin synthase
1 1 SCOP 102492 CAF1-like ribonuclease
1 1 SCOP 102575 NOL1/NOP2/sun
1 1 SCOP 102646 CoaB-like
1 1 SCOP 102745 mRNA decapping enzyme DcpS C-terminal domain
1 1 SCOP 102766 Imidazole glycerol phosphate dehydratase
1 1 SCOP 102887 Coproporphyrinogen III oxidase
1 1 SCOP 103379 2-methylcitrate dehydratase PrpD
1 1 SCOP 109613 DAK1
1 1 SCOP 109975 RPR domain (SMART 00582 )
1 1 SCOP 109994 VPS9 domain
1 1 SCOP 110020 ERO1-like
1 1 SCOP 110112 Ctag/Cox11
1 1 SCOP 110272 TFIIH domain
1 1 SCOP 110289 Cell cycle arrest protein BUB3
1 1 SCOP 110513 IF2B-like
1 1 SCOP 110702 Putative serine hydrolase Ydr428c
1 1 SCOP 110832 Nip7p homolog, N-terminal domain
1 1 SCOP 110907 Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like
1 1 SCOP 110910 Monomeric nicotinate phosphoribosyltransferase C-terminal domain
1 1 SCOP 110994 eIF-2-alpha, C-terminal domain
1 1 SCOP 111219 ArgJ-like
1 1 SCOP 111233 YfcE-like
1 1 SCOP 111431 YAP1 redox domain
1 1 SCOP 116743 eIF2alpha middle domain-like
1 1 SCOP 116795 Rad21/Rec8-like
1 1 SCOP 116943 RNA-binding protein She2p
1 1 SCOP 117002 Exportin HEAT-like repeat
1 1 SCOP 117019 ATP-dependent DNA ligase DNA-binding domain
1 1 SCOP 117290 Nucleoporin domain
1 1 SCOP 117318 YML079-like
1 1 SCOP 117685 AD-003 protein-like
1 1 SCOP 117714 Hypothetical esterase YJL068C
1 1 SCOP 117917 NifU C-terminal domain-like
1 1 SCOP 118076 TRAPP components
1 1 SCOP 118204 Vacuolar ATP synthase subunit C
1 1 SCOP 140115 VPS28 N-terminal domain
1 1 SCOP 140118 VPS37 C-terminal domain-like
1 1 SCOP 140222 SWIRM domain
1 1 SCOP 140428 VPS28 C-terminal domain-like
1 1 SCOP 140646 EXOSC10 HRDC domain-like
1 1 SCOP 140719 CSE2-like
1 1 SCOP 140722 MED7 hinge region
1 1 SCOP 140819 B56-like
1 1 SCOP 140963 Indoleamine 2,3-dioxygenase-like
1 1 SCOP 140985 PTPA-like
1 1 SCOP 140991 FtsH protease domain-like
1 1 SCOP 141368 UbiD middle domain-like
1 1 SCOP 141442 VPS36 N-terminal domain-like
1 1 SCOP 141618 3-hydroxyanthranilic acid dioxygenase-like
1 1 SCOP 141942 Thi4-like
1 1 SCOP 142186 Enolase-phosphatase E1
1 1 SCOP 142395 YKR049C-like
1 1 SCOP 142696 RibA-like
1 1 SCOP 142988 Electron transfer flavoprotein-ubiquinone oxidoreductase-like
1 1 SCOP 143001 TIM44-like
1 1 SCOP 143027 Spc25-like
1 1 SCOP 143082 BB1717-like
1 1 SCOP 143642 LplA-like
1 1 SCOP 143906 Gamma-glutamyltranspeptidase-like
1 1 SCOP 143976 lvD/EDD N-terminal domain-like
1 1 SCOP 144006 ORC1-binding domain
1 1 SCOP 144211 Nucleolar RNA-binding protein Nop10-like
1 1 SCOP 144218 CSL zinc finger
1 1 SCOP 144285 Sec2 N-terminal region
1 1 SCOP 158600 MgsA/YrvN C-terminal domain-like
1 1 SCOP 158742 Trehalase-like
1 1 SCOP 158782 HAT/Suf repeat
1 1 SCOP 159066 Dom34/Pelota N-terminal domain-like
1 1 SCOP 159513 EMG1/NEP1-like
1 1 SCOP 159623 Fumble-like
1 1 SCOP 159638 Prp8 beta-finger domain-like
1 1 SCOP 159697 TRM1-like
1 1 SCOP 159756 O-acetyltransferase
1 1 SCOP 159858 Autophagin-like
1 1 SCOP 160220 AMPKBI-like
1 1 SCOP 160684 YNR034W-A-like

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The following families have one or more weak hits:

SCOP family CHY zinc finger
SCOP family Zf-UBP
SCOP family Cation efflux protein transmembrane domain-like
SCOP family ATP synthase D chain-like
SCOP family ATP synthase B chain-like
SCOP family Diacylglycerol kinase-like
SCOP family ATP12-like
SCOP family NE1680-like
SCOP family SMI1/KNR4-like
SCOP family PH0987 N-terminal domain-like
SCOP family Smr domain
SCOP family RplX-like
SCOP family Ribosomal protein L10-like
SCOP family Rpp14/Pop5-like
SCOP family Iojap/YbeB-like
SCOP family Cation efflux protein cytoplasmic domain-like
SCOP family SLD5 C-terminal domain-like
SCOP family AtpF-like
SCOP family PH0987 C-terminal domain-like
SCOP family RNB domain-like
SCOP family Ribosomal protein L14e
SCOP family Sec63 N-terminal domain
SCOP family FCH domain
SCOP family SLD5 N-terminal domain-like
SCOP family PSF3 C-terminal domain-like
SCOP family Tex HhH-containing domain-like
SCOP family RPO3F domain-like
SCOP family Rps19E-like
SCOP family NOB1 zinc finger-like
SCOP family Ribosomal protein L33p
SCOP family Tim10/DDP
SCOP family Rhomboid-like
SCOP family Magnesium transport protein CorA, transmembrane region
SCOP family UbiD C-terminal domain-like
SCOP family RGC domain
SCOP family CorA soluble domain-like
SCOP family Ribosomal protein L28
SCOP family AMMECR1-like
SCOP family Aspartokinase allosteric domain-like
SCOP family Ribosomal protein L35p
SCOP family APG12-like
SCOP family TFB5-like
SCOP family RibD C-terminal domain-like
SCOP family TrmB-like
SCOP family Brix domain
SCOP family CofD-like
SCOP family MtnX-like
SCOP family IlvD/EDD C-terminal domain-like
SCOP family MAL13P1.257-like
SCOP family LSM14 N-terminal domain-like
SCOP family Ribosomal protein L19
SCOP family Ribosomal protein L21p
SCOP family HspBP1 domain
SCOP family EB1 dimerisation domain-like
SCOP family EDF1-like
SCOP family BSD domain
SCOP family Coronavirus NSP7-like
SCOP family Rabenosyn-5 Rab-binding domain-like
SCOP family AN1-like Zinc finger
SCOP family Putative zinc binding domain
SCOP family Tpt1/KptA
SCOP family Ribosomal protein L16p
SCOP family C9orf74 homolog
SCOP family Ribosomal protein S24e
SCOP family Magnesium-dependent phosphatase-1, Mdp1
SCOP family WrbA-like
SCOP family YicI catalytic domain-like
SCOP family Ureidoglycolate hydrolase AllA
SCOP family Kelch motif
SCOP family Ribosomal protein L35ae
SCOP family Chromo barrel domain
SCOP family ProC C-terminal domain-like
SCOP family MIT domain
SCOP family Rps17e-like
SCOP family RpoE2-like
SCOP family HkH motif-containing C2H2 finger
SCOP family NAD kinase-like
SCOP family AF1104-like
SCOP family SSo0622-like
SCOP family RIO1-like kinases
SCOP family Inositol polyphosphate kinase (IPK)
SCOP family FGAM synthase PurL, PurS-like domain
SCOP family HSP90 C-terminal domain
SCOP family 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
SCOP family Peptidyl-tRNA hydrolase domain
SCOP family Hypothetical protein AF0491, N-terminal domain
SCOP family RWD domain
SCOP family Hypothetical protein SAV1430
SCOP family Glycosyl transferases group 1
SCOP family Ppx/GppA phosphatase
SCOP family Trehalose-phosphatase
SCOP family Ornithine cyclodeaminase-like
SCOP family Ribosomal L27 protein
SCOP family Oligoxyloglucan reducing end-specific cellobiohydrolase
SCOP family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP family Surp module (SWAP domain)
SCOP family I/LWEQ domain
SCOP family FGAM synthase PurL, linker domain
SCOP family Hypothetical protein AF0491, middle domain
SCOP family Conserved carboxylase domain
SCOP family DEK C-terminal domain
SCOP family Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP family BAR domain
SCOP family Glycerol-3-phosphate transporter
SCOP family Preprotein translocase SecE subunit
SCOP family Kinase associated domain 1, KA1
SCOP family Steroid-binding domain
SCOP family NADH pyrophosphatase
SCOP family Coatomer appendage domain
SCOP family Activator of Hsp90 ATPase, Aha1
SCOP family Aminomethyltransferase folate-binding domain
SCOP family tRNA pseudouridine synthase TruD
SCOP family Galactokinase
SCOP family mRNA decapping enzyme DcpS N-terminal domain
SCOP family Polo-box duplicated region
SCOP family YigZ N-terminal domain-like
SCOP family NIF3 (NGG1p interacting factor 3)-like
SCOP family Phosphonoacetate hydrolase
SCOP family LmbE-like
SCOP family (Uracil-5-)-methyltransferase
SCOP family NagD-like
SCOP family Aminopeptidase/glucanase lid domain
SCOP family Aminomethyltransferase beta-barrel domain
SCOP family RNase P subunit p29-like
SCOP family GS domain
SCOP family Coatomer appendage domain
SCOP family DhaL-like
SCOP family TENA/THI-4
SCOP family Hsp90 co-chaperone CDC37
SCOP family HD domain
SCOP family La domain
SCOP family Translation initiation factor 2 beta, aIF2beta, N-terminal domain
SCOP family Ku70 subunit N-terminal domain
SCOP family Heat shock protein 70kD (HSP70), C-terminal subdomain
SCOP family Phosphoinositide-binding clathrin adaptor, domain 2
SCOP family Phosphoinositide-binding clathrin adaptor, N-terminal domain
SCOP family Myosin rod fragments
SCOP family CCCH zinc finger
SCOP family U-box
SCOP family Ribosomal protein S27e
SCOP family ABC transporter transmembrane region
SCOP family Hypothetical protein YjiA, C-terminal domain
SCOP family PaaI/YdiI-like
SCOP family PhzC/PhzF-like
SCOP family Deoxycytidylate deaminase-like
SCOP family N5-glutamine methyltransferase, HemK
SCOP family XPF/Rad1/Mus81 nuclease
SCOP family PIN domain
SCOP family RraA-like
SCOP family NodB-like polysaccharide deacetylase
SCOP family HesB-like domain
SCOP family DNA replication initiator (cdc21/cdc54) N-terminal domain
SCOP family Hypothetical protein HI1317
SCOP family GAT domain
SCOP family DmpG/LeuA communication domain-like
SCOP family CUE domain
SCOP family ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
SCOP family PUA domain
SCOP family alpha-mannosidase, domain 2
SCOP family R3H domain
SCOP family Poly A polymerase head domain-like
SCOP family BolA-like
SCOP family The homologous-pairing domain of Rad52 recombinase
SCOP family Homocysteine S-methyltransferase
SCOP family TatD Mg-dependent DNase-like
SCOP family Tp47 lipoprotein, N-terminal domain
SCOP family C-terminal autoproteolytic domain of nucleoporin nup98
SCOP family Histone lysine methyltransferases
SCOP family FAS1 domain
SCOP family MIR domain
SCOP family Obg GTP-binding protein N-terminal domain
SCOP family Double Clp-N motif
SCOP family HCP-like
SCOP family Poly A polymerase C-terminal region-like
SCOP family FF domain
SCOP family Calcium ATPase, transmembrane domain M
SCOP family Metal cation-transporting ATPase, ATP-binding domain N
SCOP family Meta-cation ATPase, catalytic domain P
SCOP family Calcium ATPase, transduction domain A
SCOP family F1F0 ATP synthase subunit B, membrane domain
SCOP family Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP family Mitochondrial cytochrome c oxidase subunit VIa
SCOP family Mitochondrial cytochrome c oxidase subunit IV
SCOP family F1F0 ATP synthase subunit C
SCOP family Voltage-gated potassium channels
SCOP family Bacteriorhodopsin-like
SCOP family DNA polymerase beta-like
SCOP family TGS domain
SCOP family Zinc-binding domain of translation initiation factor 2 beta
SCOP family Smc hinge domain
SCOP family Pseudouridine synthase RsuA/RluD
SCOP family Mevalonate kinase
SCOP family D-ribose-5-phosphate isomerase (RpiA), lid domain
SCOP family N-acetyl-l-glutamate kinase
SCOP family YjeF C-terminal domain-like
SCOP family Hypothetical protein MTH1 (MT0001), dimerisation domain
SCOP family SpoU-like RNA 2'-O ribose methyltransferase
SCOP family Gluconate kinase
SCOP family D-ribose-5-phosphate isomerase (RpiA), catalytic domain
SCOP family Cap-Gly domain
SCOP family Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP family gamma-adaptin C-terminal appendage domain-like
SCOP family acyl-CoA oxidase C-terminal domains
SCOP family LCCL domain
SCOP family alpha-ketoacid dehydrogenase kinase, C-terminal domain
SCOP family SRP19
SCOP family HemD-like
SCOP family Molybdenum cofactor biosynthesis protein MoeB
SCOP family Mitochondrial resolvase ydc2 catalytic domain
SCOP family PWWP domain
SCOP family Arp2/3 complex 16 kDa subunit ARPC5
SCOP family Ketopantoate reductase PanE
SCOP family RNase III catalytic domain-like
SCOP family alpha-ketoacid dehydrogenase kinase, N-terminal domain
SCOP family SAP domain
SCOP family Cytidylytransferase
SCOP family F1 ATPase inhibitor, IF1, C-terminal domain
SCOP family Intermediate filament protein, coiled coil region
SCOP family RBP12 subunit of RNA polymerase II
SCOP family Carbamilase
SCOP family IPP isomerase-like
SCOP family Fungal zinc peptidase
SCOP family Manganese-dependent inorganic pyrophosphatase (family II)
SCOP family Gtf glycosyltransferase
SCOP family tRNA(1-methyladenosine) methyltransferase-like
SCOP family SGL-like
SCOP family Leukotriene A4 hydrolase C-terminal domain
SCOP family Glycosyltransferase family 36 C-terminal domain
SCOP family Penta-EF-hand proteins
SCOP family BAG domain
SCOP family DEP domain
SCOP family Ferredoxin reductase FAD-binding domain-like
SCOP family Apolipoprotein A-I
SCOP family Influenza hemagglutinin (stalk)
SCOP family Coiled-coil domain of nucleotide exchange factor GrpE
SCOP family Tropomyosin
SCOP family Inhibitor of apoptosis (IAP) repeat
SCOP family PHD domain
SCOP family TFIIH p44 subunit cysteine-rich domain
SCOP family Zinc domain conserved in yeast copper-regulated transcription factors
SCOP family Pyk2-associated protein beta ARF-GAP domain
SCOP family Ribosomal protein L36
SCOP family Ribosomal protein L37e
SCOP family Ribosomal protein L37ae
SCOP family Cytochrome c oxidase Subunit F
SCOP family Microbial and mitochondrial ADK, insert "zinc finger" domain
SCOP family Methionyl-tRNA synthetase (MetRS), Zn-domain
SCOP family Retrovirus zinc finger-like domains
SCOP family Ribosomal protein S14
SCOP family Ribosomal protein L24e
SCOP family Erythroid transcription factor GATA-1
SCOP family Zn2/Cys6 DNA-binding domain
SCOP family Classic zinc finger, C2H2
SCOP family LDL receptor-like module
SCOP family Colicin
SCOP family Ribosomal protein L1
SCOP family PriA-like
SCOP family DNA topoisomerase IV, alpha subunit
SCOP family C-type lectin domain
SCOP family FAD-linked oxidases, N-terminal domain
SCOP family Ribosomal protein L6
SCOP family DNA repair glycosylase, N-terminal domain
SCOP family Glutamine synthetase catalytic domain
SCOP family Histidine kinase
SCOP family YrdC-like
SCOP family MutT-like
SCOP family Ribonuclease PH domain 2-like
SCOP family Ribosomal protein L9 N-domain
SCOP family SH2 domain
SCOP family NADH oxidase/flavin reductase
SCOP family GYF domain
SCOP family DNA repair protein MutS, domain I
SCOP family Ribosome recycling factor, RRF
SCOP family Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP family Ribosomal protein S4
SCOP family mRNA triphosphatase CET1
SCOP family Ribosomal protein L30p/L7e
SCOP family Duplicated SiR/NiR-like domains 1 and 3
SCOP family Pseudouridine synthase I TruA
SCOP family 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
SCOP family Bacterial exopeptidase dimerisation domain
SCOP family Allosteric threonine deaminase C-terminal domain
SCOP family Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
SCOP family Ribosomal protein S10
SCOP family Ribosomal protein S6
SCOP family Anticodon-binding domain of PheRS
SCOP family EF-G/eEF-2 domains III and V
SCOP family Subtilase propeptides/inhibitors
SCOP family Group II chaperonin (CCT, TRIC), intermediate domain
SCOP family Ribosomal protein L22
SCOP family Ribosomal protein S3 C-terminal domain
SCOP family Ribosomal S5 protein, N-terminal domain
SCOP family Signal recognition particle alu RNA binding heterodimer, SRP9/14
SCOP family Ribosomal protein L7/12, C-terminal domain
SCOP family NadC N-terminal domain-like
SCOP family Ribosomal protein L31e
SCOP family Ribosomal protein S19
SCOP family Ribosomal protein S16
SCOP family Chitinase insertion domain
SCOP family Mitochondrial glycoprotein MAM33-like
SCOP family MHC antigen-recognition domain
SCOP family Transcriptional coactivator PC4 C-terminal domain
SCOP family Glutamine synthetase, N-terminal domain
SCOP family 2Fe-2S ferredoxin domains from multidomain proteins
SCOP family 2Fe-2S ferredoxin-related
SCOP family DNA gyrase/MutL, second domain
SCOP family Translational machinery components
SCOP family HIT (HINT, histidine triad) family of protein kinase-interacting proteins
SCOP family L23p
SCOP family DNA/RNA non-specific endonuclease
SCOP family Fe-only hydrogenase
SCOP family Phosphate binding protein-like
SCOP family Lysophospholipase
SCOP family AraD-like aldolase/epimerase
SCOP family Bacterial lipase
SCOP family Fungal lipases
SCOP family RNA methyltransferase FtsJ
SCOP family Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SCOP family Folylpolyglutamate synthetase, C-terminal domain
SCOP family Aminoacid dehydrogenases
SCOP family FolH catalytic domain-like
SCOP family DNA repair protein MutS, domain II
SCOP family Retroviral integrase, catalytic domain
SCOP family Creatinase/prolidase N-terminal domain
SCOP family tRNA-intron endonuclease catalytic domain-like
SCOP family Maf-like
SCOP family Anticodon-binding domain of Class II aaRS
SCOP family Pyruvate-ferredoxin oxidoreductase, PFOR, domain II
SCOP family Thioltransferase
SCOP family Multidomain sulfurtransferase (rhodanese)
SCOP family Cell cycle control phosphatase, catalytic domain
SCOP family NagB-like
SCOP family Cryptochrome/photolyase, N-terminal domain
SCOP family PAPS reductase-like
SCOP family Cytidylyltransferase
SCOP family NADPH-cytochrome p450 reductase-like
SCOP family Reductases
SCOP family L-alanine dehydrogenase-like
SCOP family Cytochrome p450 reductase N-terminal domain-like
SCOP family CheY-related
SCOP family Initiation factor IF2/eIF5b, domain 3
SCOP family FabD-like
SCOP family DNA ligase
SCOP family Anti-sigma factor antagonist SpoIIaa
SCOP family mRNA export factor tap
SCOP family Internalin LRR domain
SCOP family Ribosomal protein L32e
SCOP family Group II chaperonin (CCT, TRIC), apical domain
SCOP family GroEL-like chaperone, apical domain
SCOP family PA domain
SCOP family N-terminal domain of adrenodoxin reductase-like
SCOP family Malate synthase G
SCOP family Epsilon subunit of F1F0-ATP synthase N-terminal domain
SCOP family RabGEF Mss4
SCOP family Type 1 signal peptidase
SCOP family BC C-terminal domain-like
SCOP family Mannose-binding lectins
SCOP family Head domain of nucleotide exchange factor GrpE
SCOP family WW domain
SCOP family alpha-Amylases, C-terminal beta-sheet domain
SCOP family Rap30/74 interaction domains
SCOP family Mannose 6-phosphate receptor domain
SCOP family Enabled/VASP homology 1 domain (EVH1 domain)
SCOP family Pleckstrin-homology domain (PH domain)
SCOP family Retroviral protease (retropepsin)
SCOP family NADPH-cytochrome p450 reductase FAD-binding domain-like
SCOP family Staphylococcal nuclease
SCOP family GroES
SCOP family eIF5a N-terminal domain-like
SCOP family Myosin S1 fragment, N-terminal domain
SCOP family Glycosyl hydrolases family 16
SCOP family Phosphatidylethanolamine binding protein
SCOP family Co-chaperone p23-like
SCOP family HSP20
SCOP family Synaptotagmin-like (S variant)
SCOP family PLC-like (P variant)
SCOP family Multidomain cupredoxins
SCOP family MSP-like
SCOP family Epsilon subunit of mitochondrial F1F0-ATP synthase
SCOP family Proteinase A inhibitor IA3
SCOP family Ribosomal protein L39e
SCOP family Eukaryotic type heme oxygenase
SCOP family Group II chaperonin (CCT, TRIC), ATPase domain
SCOP family Cytochrome c oxidase subunit E
SCOP family VHS domain
SCOP family Phoshoinositide 3-kinase (PI3K) helical domain
SCOP family HEAT repeat
SCOP family p120GAP domain-like
SCOP family BCR-homology GTPase activation domain (BH-domain)
SCOP family DNA repair protein MutS, domain III
SCOP family Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SCOP family Glycerol-3-phosphate dehydrogenase
SCOP family Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI)
SCOP family R1 subunit of ribonucleotide reductase, N-terminal domain
SCOP family Endonuclease III
SCOP family Ribosomal protein L19 (L19e)
SCOP family Regulator of G-protein signaling, RGS
SCOP family DBL homology domain (DH-domain)
SCOP family N-terminal domain of the delta subunit of the F1F0-ATP synthase
SCOP family Ypt/Rab-GAP domain of gyp1p
SCOP family Transducin (alpha subunit), insertion domain
SCOP family DNA polymerase beta, N-terminal domain-like
SCOP family SAM (sterile alpha motif) domain
SCOP family Cytochrome c oxidase subunit h
SCOP family Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
SCOP family Transferrin receptor-like dimerisation domain
SCOP family SWIB/MDM2 domain
SCOP family Eps15 homology domain (EH domain)
SCOP family Homodimeric domain of signal transducing histidine kinase
SCOP family Domain of the SRP/SRP receptor G-proteins
SCOP family Acyl-carrier protein (ACP)
SCOP family Mitochondrial import receptor subunit Tom20
SCOP family HSC20 (HSCB), C-terminal oligomerisation domain
SCOP family TBP-associated factors, TAFs
SCOP family p8-MTCP1
SCOP family Ribosomal protein S15
SCOP family Acyl-CoA binding protein
SCOP family Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
SCOP family Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SCOP family DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain
SCOP family Domains B1 and B5 of PheRS-beta, PheT
SCOP family Ribosomal protein S13
SCOP family Elongation factor TFIIS domain 2
SCOP family UBA domain
SCOP family Ribosomal protein S18
SCOP family Ribosomal protein L11, C-terminal domain
SCOP family Methionine aminopeptidase, insert domain
SCOP family P4 origin-binding domain-like
SCOP family DNA-binding domain from rap30
SCOP family Forkhead DNA-binding domain
SCOP family Myb/SANT domain
SCOP family Fe,Mn superoxide dismutase (SOD), N-terminal domain
SCOP family Prefoldin
SCOP family Chaperone J-domain
SCOP family Ribosomal protein L29 (L29p)
SCOP family Globins

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.