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Saccharomyces cerevisiae Y10 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; Saccharomyces cerevisiae Y10

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 2656 total
1254 (47 %) with assignment
296 average length
41 % amino acid coverage
Domains: 1633 total
509 unique superfamilies
329 unique families
255 average length
3.2 average superfamily size
69 % formed by duplication
Domain combinations: 207 domain pairs
755 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

98 87 30 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
32 23 12 0 SCOP 54928 RNA-binding domain, RBD
30 27 10 5 SCOP 48371 ARM repeat
30 30 5 2 SCOP 50978 WD40 repeat-like
29 29 8 1 SCOP 56112 Protein kinase-like (PK-like)
28 27 13 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
25 21 8 2 SCOP 52833 Thioredoxin-like
25 13 6 3 SCOP 53067 Actin-like ATPase domain
23 20 12 3 SCOP 46785 "Winged helix" DNA-binding domain
22 21 5 0 SCOP 103473 MFS general substrate transporter
21 21 3 4 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
19 19 2 1 SCOP 103506 Mitochondrial carrier
18 15 10 5 SCOP 50249 Nucleic acid-binding proteins
17 13 9 2 SCOP 48452 TPR-like
17 16 11 1 SCOP 57850 RING/U-box
16 15 12 4 SCOP 54211 Ribosomal protein S5 domain 2-like
15 9 6 7 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
14 10 8 1 SCOP 46689 Homeodomain-like
14 14 4 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
13 13 4 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
13 13 3 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
12 12 3 3 SCOP 53383 PLP-dependent transferases
12 12 2 1 SCOP 47113 Histone-fold
12 12 3 0 SCOP 57667 beta-beta-alpha zinc fingers
11 11 3 0 SCOP 53474 alpha/beta-Hydrolases
10 10 2 3 SCOP 56784 HAD-like
10 10 3 1 SCOP 54495 UBC-like
10 9 9 0 SCOP 57903 FYVE/PHD zinc finger
9 9 4 2 SCOP 56300 Metallo-dependent phosphatases
9 8 8 1 SCOP 55681 Class II aaRS and biotin synthetases
9 9 4 0 SCOP 50182 Sm-like ribonucleoproteins
9 8 7 1 SCOP 50044 SH3-domain
9 6 6 1 SCOP 47370 Bromodomain
8 8 3 2 SCOP 53271 PRTase-like
8 8 2 0 SCOP 57829 Zn-binding ribosomal proteins
8 7 5 2 SCOP 51905 FAD/NAD(P)-binding domain
8 7 6 2 SCOP 54236 Ubiquitin-like
8 8 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
8 8 3 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
8 4 3 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
8 4 4 0 SCOP 52113 BRCT domain
8 8 4 1 SCOP 57959 Leucine zipper domain
7 7 5 2 SCOP 52374 Nucleotidylyl transferase
7 6 6 0 SCOP 103657 BAR/IMD domain-like
7 6 5 1 SCOP 58038 SNARE fusion complex
7 6 4 1 SCOP 47473 EF-hand
7 7 4 2 SCOP 50447 Translation proteins
7 4 4 0 SCOP 81901 HCP-like
7 5 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
7 7 3 0 SCOP 46565 Chaperone J-domain
7 7 5 2 SCOP 47616 GST C-terminal domain-like
7 6 6 1 SCOP 50729 PH domain-like
7 5 3 0 SCOP 47954 Cyclin-like
6 6 4 4 SCOP 51556 Metallo-dependent hydrolases
6 6 2 1 SCOP 52317 Class I glutamine amidotransferase-like
6 6 2 0 SCOP 50104 Translation proteins SH3-like domain
6 6 2 1 SCOP 50129 GroES-like
6 6 2 1 SCOP 55315 L30e-like
6 6 3 0 SCOP 46579 Prefoldin
6 3 3 0 SCOP 57756 Retrovirus zinc finger-like domains
6 5 5 0 SCOP 51045 WW domain
5 5 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
5 5 4 1 SCOP 100950 NagB/RpiA/CoA transferase-like
5 5 2 1 SCOP 53098 Ribonuclease H-like
5 4 2 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
5 5 4 1 SCOP 64356 SNARE-like
5 5 3 4 SCOP 54001 Cysteine proteinases
5 5 4 0 SCOP 48403 Ankyrin repeat
5 5 2 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
5 4 4 1 SCOP 54695 POZ domain
5 5 5 0 SCOP 52954 Class II aaRS ABD-related
5 5 5 0 SCOP 49879 SMAD/FHA domain
5 5 4 2 SCOP 52922 TK C-terminal domain-like
4 4 3 3 SCOP 53927 Cytidine deaminase-like
4 4 3 1 SCOP 81606 PP2C-like
4 4 1 1 SCOP 51366 Ribulose-phoshate binding barrel
4 4 2 0 SCOP 54197 HIT-like
4 4 3 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
4 4 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
4 4 2 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
4 4 2 1 SCOP 51395 FMN-linked oxidoreductases
4 4 3 0 SCOP 49764 HSP20-like chaperones
4 4 3 1 SCOP 56672 DNA/RNA polymerases
4 4 3 1 SCOP 50891 Cyclophilin-like
4 4 3 1 SCOP 88723 PIN domain-like
4 4 2 1 SCOP 49899 Concanavalin A-like lectins/glucanases
4 4 2 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
4 4 2 2 SCOP 52467 DHS-like NAD/FAD-binding domain
4 3 3 0 SCOP 55021 ACT-like
4 4 1 1 SCOP 51604 Enolase C-terminal domain-like
4 2 2 1 SCOP 56024 Phospholipase D/nuclease
4 4 3 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
4 4 1 1 SCOP 54826 Enolase N-terminal domain-like
4 4 3 1 SCOP 54768 dsRNA-binding domain-like
4 4 2 1 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
4 2 1 0 SCOP 56053 Ribosomal protein L6
4 4 4 0 SCOP 48350 GTPase activation domain, GAP
4 3 3 0 SCOP 90229 CCCH zinc finger
4 4 3 1 SCOP 52087 CRAL/TRIO domain
4 4 2 0 SCOP 57701 Zn2/Cys6 DNA-binding domain
4 2 2 1 SCOP 81698 FF domain
3 3 2 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
3 3 3 1 SCOP 55920 Creatinase/aminopeptidase
3 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
3 3 2 2 SCOP 53720 ALDH-like
3 3 3 0 SCOP 55811 Nudix
3 3 3 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
3 3 2 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
3 3 1 1 SCOP 53254 Phosphoglycerate mutase-like
3 3 2 1 SCOP 47095 HMG-box
3 3 2 0 SCOP 144122 Tim10-like
3 3 3 1 SCOP 81296 E set domains
3 3 2 1 SCOP 54534 FKBP-like
3 3 2 2 SCOP 46626 Cytochrome c
3 3 2 1 SCOP 54427 NTF2-like
3 2 2 1 SCOP 49785 Galactose-binding domain-like
3 3 2 1 SCOP 50630 Acid proteases
3 3 2 0 SCOP 51445 (Trans)glycosidases
3 3 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
3 3 2 0 SCOP 56019 The spindle assembly checkpoint protein mad2
3 3 2 3 SCOP 51182 RmlC-like cupins
3 3 2 1 SCOP 51197 Clavaminate synthase-like
3 3 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 3 0 SCOP 52047 RNI-like
3 3 2 1 SCOP 64268 PX domain
3 3 2 2 SCOP 52768 Arginase/deacetylase
3 3 3 0 SCOP 52058 L domain-like
3 3 2 0 SCOP 57783 Zinc beta-ribbon
3 3 3 1 SCOP 81301 Nucleotidyltransferase
3 3 3 1 SCOP 53300 vWA-like
3 3 2 0 SCOP 56219 DNase I-like
3 3 3 0 SCOP 88697 PUA domain-like
3 2 2 1 SCOP 63411 LuxS/MPP-like metallohydrolase
3 3 2 0 SCOP 47592 SWIB/MDM2 domain
3 3 2 1 SCOP 52490 Tubulin nucleotide-binding domain-like
3 2 2 1 SCOP 52777 CoA-dependent acyltransferases
3 3 1 0 SCOP 117281 Kelch motif
3 3 2 1 SCOP 47661 t-snare proteins
3 1 1 0 SCOP 49313 Cadherin-like
3 3 1 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 3 0 SCOP 48334 DNA repair protein MutS, domain III
3 3 2 1 SCOP 55307 Tubulin C-terminal domain-like
3 3 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
3 3 3 1 SCOP 81631 PAP/OAS1 substrate-binding domain
3 2 2 1 SCOP 55945 TATA-box binding protein-like
3 3 2 1 SCOP 46938 CRAL/TRIO N-terminal domain
3 3 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
3 1 1 1 SCOP 53738 Phosphoglucomutase, first 3 domains
3 3 3 0 SCOP 49348 Clathrin adaptor appendage domain
3 3 1 0 SCOP 81271 TGS-like
3 3 2 0 SCOP 158573 GINS helical bundle-like
3 3 3 0 SCOP 47769 SAM/Pointed domain
3 2 2 0 SCOP 57889 Cysteine-rich domain
3 3 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 1 SCOP 53613 Ribokinase-like
2 2 1 1 SCOP 75304 Amidase signature (AS) enzymes
2 2 2 1 SCOP 53697 SIS domain
2 2 2 0 SCOP 54999 Ribosomal protein S10
2 2 2 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 1 1 SCOP 56047 Ribosomal protein S8
2 2 2 0 SCOP 53137 Translational machinery components
2 2 1 0 SCOP 46946 S13-like H2TH domain
2 2 2 0 SCOP 55120 Pseudouridine synthase
2 2 2 1 SCOP 53597 Dihydrofolate reductase-like
2 2 1 1 SCOP 47240 Ferritin-like
2 2 2 0 SCOP 52218 Flavoproteins
2 2 1 0 SCOP 75620 Release factor
2 2 2 0 SCOP 55174 Alpha-L RNA-binding motif
2 2 2 1 SCOP 75217 alpha/beta knot
2 2 2 0 SCOP 160369 Ribosomal protein L10-like
2 2 2 1 SCOP 53850 Periplasmic binding protein-like II
2 2 2 1 SCOP 53633 Carbamate kinase-like
2 2 2 1 SCOP 51730 FAD-linked oxidoreductase
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
2 2 2 1 SCOP 48150 DNA-glycosylase
2 1 1 0 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
2 2 2 1 SCOP 52313 Ribosomal protein S2
2 2 1 1 SCOP 102114 Radical SAM enzymes
2 1 1 1 SCOP 142695 RibA-like
2 2 1 1 SCOP 55298 YjgF-like
2 2 2 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 2 1 SCOP 51419 PLP-binding barrel
2 2 2 1 SCOP 53187 Zn-dependent exopeptidases
2 2 2 2 SCOP 56104 SAICAR synthase-like
2 2 1 1 SCOP 144217 CSL zinc finger
2 2 2 1 SCOP 50475 FMN-binding split barrel
2 2 2 1 SCOP 56801 Acetyl-CoA synthetase-like
2 2 2 0 SCOP 48613 Heme oxygenase-like
2 2 1 1 SCOP 160683 YNR034W-A-like
2 2 1 2 SCOP 51726 UROD/MetE-like
2 2 2 1 SCOP 55753 Actin depolymerizing proteins
2 2 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
2 2 2 2 SCOP 140718 Mediator hinge subcomplex-like
2 2 2 1 SCOP 56322 ADC synthase
2 2 1 0 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
2 2 1 0 SCOP 54897 Protease propeptides/inhibitors
2 2 1 1 SCOP 53774 Glutaminase/Asparaginase
2 2 2 0 SCOP 56317 Carbon-nitrogen hydrolase
2 2 1 0 SCOP 51306 LexA/Signal peptidase
2 2 2 1 SCOP 47819 HRDC-like
2 2 2 1 SCOP 49329 Cu,Zn superoxide dismutase-like
2 2 2 0 SCOP 47072 Cysteine alpha-hairpin motif
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 2 0 SCOP 88713 Glycoside hydrolase/deacetylase
2 2 2 2 SCOP 55257 RBP11-like subunits of RNA polymerase
2 2 2 1 SCOP 55159 eIF1-like
2 2 2 1 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 2 0 SCOP 52151 FabD/lysophospholipase-like
2 2 2 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
2 2 2 0 SCOP 144091 Rhomboid-like
2 1 1 0 SCOP 54631 CBS-domain pair
2 2 2 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
2 2 2 1 SCOP 51230 Single hybrid motif
2 1 1 0 SCOP 49503 Cupredoxins
2 2 2 0 SCOP 89550 PHP domain-like
2 2 1 1 SCOP 50800 PK beta-barrel domain-like
2 2 1 0 SCOP 69065 RNase III domain-like
2 2 2 0 SCOP 69322 Tricorn protease domain 2
2 1 1 0 SCOP 53901 Thiolase-like
2 2 2 0 SCOP 82199 SET domain
2 2 1 0 SCOP 54626 Chalcone isomerase
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 2 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
2 2 1 0 SCOP 56176 FAD-binding/transporter-associated domain-like
2 2 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 1 1 0 SCOP 54980 EF-G C-terminal domain-like
2 1 1 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
2 2 1 1 SCOP 52935 PK C-terminal domain-like
2 2 2 1 SCOP 81995 beta-sandwich domain of Sec23/24
2 2 1 0 SCOP 160059 PriA/YqbF domain
2 2 2 1 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
2 2 2 0 SCOP 81383 F-box domain
2 2 2 1 SCOP 48225 Seven-hairpin glycosidases
2 2 2 0 SCOP 52029 GroEL apical domain-like
2 2 2 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
2 2 2 0 SCOP 46934 UBA-like
2 2 1 0 SCOP 48366 Ras GEF
2 2 1 0 SCOP 117892 Band 7/SPFH domain
2 1 1 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
2 2 2 0 SCOP 63748 Tudor/PWWP/MBT
2 2 2 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
2 1 1 0 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
2 2 2 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
2 2 2 0 SCOP 48464 ENTH/VHS domain
2 2 1 1 SCOP 55455 SRF-like
2 1 1 0 SCOP 109905 Surp module (SWAP domain)
2 2 2 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
2 2 1 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
2 1 1 1 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 2 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 2 0 SCOP 111430 YAP1 redox domain
2 2 2 1 SCOP 46942 Elongation factor TFIIS domain 2
2 2 2 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
2 1 1 0 SCOP 82615 Polo-box domain
2 2 2 1 SCOP 81811 Helical domain of Sec23/24
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 0 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 55282 RL5-like
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 53784 Phosphofructokinase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 0 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 52980 Restriction endonuclease-like
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 51316 Mss4-like
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 89360 HesB-like domain
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 0 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 56655 Carbohydrate phosphatase
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55205 EPT/RTPC-like
1 1 1 0 SCOP 82657 BolA-like
1 1 1 1 SCOP 54060 His-Me finger endonucleases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 48576 Terpenoid synthases
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 50985 RCC1/BLIP-II
1 1 1 1 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 0 SCOP 143744 GlcG-like
1 1 1 0 SCOP 109604 HD-domain/PDEase-like
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 1 SCOP 53328 Formyltransferase
1 1 1 1 SCOP 54648 DLC
1 1 1 1 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 53649 Alkaline phosphatase-like
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 47027 Acyl-CoA binding protein
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 1 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 144000 Oxysterol-binding protein-like
1 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
1 1 1 1 SCOP 57868 Metallothionein
1 1 1 0 SCOP 74650 Galactose mutarotase-like
1 1 1 1 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 57997 Tropomyosin
1 1 1 1 SCOP 48439 Protein prenylyltransferase
1 1 1 1 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 1 SCOP 69645 Arp2/3 complex subunits
1 1 1 1 SCOP 48208 Six-hairpin glycosidases
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 1 SCOP 116942 RNA-binding protein She2p
1 1 1 1 SCOP 48113 Heme-dependent peroxidases
1 1 1 0 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 1 SCOP 49777 PEBP-like
1 1 1 0 SCOP 81427 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 1 SCOP 89975 Hypothetical protein Yml108w
1 1 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 55008 HMA, heavy metal-associated domain
1 1 1 0 SCOP 55961 Bet v1-like
1 1 1 0 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 52266 SGNH hydrolase
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 1 SCOP 47576 Calponin-homology domain, CH-domain
1 1 1 1 SCOP 55909 Pentein
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 141734 HisI-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 46955 Putative DNA-binding domain
1 1 1 0 SCOP 48264 Cytochrome P450
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 1 SCOP 55797 PR-1-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 1 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
1 1 1 0 SCOP 160909 ATP12-like
1 1 1 1 SCOP 103025 Folate-binding domain
1 1 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 1 SCOP 52335 Methylglyoxal synthase-like
1 1 1 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
1 1 1 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 0 SCOP 142338 CofD-like
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
1 1 1 0 SCOP 100939 SPOC domain-like
1 1 1 0 SCOP 82171 DPP6 N-terminal domain-like
1 1 1 0 SCOP 89562 RraA-like
1 1 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 1 SCOP 89124 Nop domain
1 1 1 0 SCOP 111321 AF1104-like
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 55895 Ribonuclease Rh-like
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 0 SCOP 90123 ABC transporter transmembrane region
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 0 SCOP 48592 GroEL equatorial domain-like
1 1 1 0 SCOP 50156 PDZ domain-like
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 1 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 1 0 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 1 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 0 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 0 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68906 SAP domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 63380 Riboflavin synthase domain-like
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 90209 Ran binding protein zinc finger-like
1 1 1 0 SCOP 49354 PapD-like
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 1 SCOP 117289 Nucleoporin domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 50677 ValRS/IleRS/LeuRS editing domain
1 1 1 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
1 1 1 0 SCOP 74924 Cap-Gly domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82708 R3H domain
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 1 SCOP 82061 BAH domain
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 101152 Mob1/phocein
1 1 1 1 SCOP 48445 14-3-3 protein
1 1 1 1 SCOP 69000 FAD-dependent thiol oxidase
1 1 1 1 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
1 1 1 0 SCOP 47895 Transducin (alpha subunit), insertion domain
1 1 1 0 SCOP 82109 MIR domain
1 1 1 1 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
1 1 1 1 SCOP 109993 VPS9 domain
1 1 1 0 SCOP 116846 MIT domain
1 1 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
1 1 1 0 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
1 1 1 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
1 1 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 75632 Cullin homology domain
1 1 1 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
1 1 1 0 SCOP 63491 BAG domain
1 1 1 0 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 0 SCOP 50911 Mannose 6-phosphate receptor domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 0 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 1 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 1 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
1 1 1 1 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 109715 DEK C-terminal domain
1 1 1 0 SCOP 47157 Mitochondrial import receptor subunit Tom20
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 50916 Rap30/74 interaction domains
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 55277 GYF domain
1 1 1 0 SCOP 69848 LCCL domain
1 1 1 1 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 160219 AMPKBI-like
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 89009 GAT-like domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 82919 Zn-finger domain of Sec23/24
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 48686 Proteinase A inhibitor IA3
1 1 1 1 SCOP 143026 Kinetochore globular domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Amyloid beta a4 protein copper binding domain (domain 2)
SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily ssDNA viruses
SCOP superfamily AlbA-like
SCOP superfamily Tp47 lipoprotein, N-terminal domain
SCOP superfamily Calcium ATPase, transmembrane domain M
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Clc chloride channel
SCOP superfamily Voltage-gated potassium channels
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Cullin repeat-like
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Integrin alpha N-terminal domain
SCOP superfamily gp5 N-terminal domain-like
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
SCOP superfamily P-domain of calnexin/calreticulin
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily TAZ domain
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily EGF/Laminin
SCOP superfamily Colicin
SCOP superfamily Serpins
SCOP superfamily C-type lectin-like
SCOP superfamily DNA clamp
SCOP superfamily Glutamine synthetase/guanido kinase
SCOP superfamily DNA topoisomerase I domain
SCOP superfamily Phoshotransferase/anion transport protein
SCOP superfamily L9 N-domain-like
SCOP superfamily Translation initiation factor IF3, C-terminal domain
SCOP superfamily CYTH-like phosphatases
SCOP superfamily Probable ACP-binding domain of malonyl-CoA ACP transacylase
SCOP superfamily 4Fe-4S ferredoxins
SCOP superfamily Cdc48 domain 2-like
SCOP superfamily Tubby C-terminal domain-like
SCOP superfamily Penicillin-binding protein 2x (pbp-2x), c-terminal domain
SCOP superfamily RNase A-like
SCOP superfamily Aspartate/glutamate racemase
SCOP superfamily ATP synthase (F1-ATPase), gamma subunit
SCOP superfamily CheY-like
SCOP superfamily Caspase-like
SCOP superfamily TRAP-like
SCOP superfamily Pectin lyase-like
SCOP superfamily C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
SCOP superfamily Quinoprotein alcohol dehydrogenase-like
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily N-terminal domain of alpha and beta subunits of F1 ATP synthase
SCOP superfamily Baculovirus p35 protein
SCOP superfamily TNF-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily Multiheme cytochromes
SCOP superfamily TrpR-like
SCOP superfamily Carbamoyl phosphate synthetase, large subunit connection domain
SCOP superfamily Retrovirus capsid protein, N-terminal core domain
SCOP superfamily Cytochrome c oxidase subunit h
SCOP superfamily ROP protein
SCOP superfamily Domain of the SRP/SRP receptor G-proteins
SCOP superfamily Histidine-containing phosphotransfer domain, HPT domain
SCOP superfamily FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
SCOP superfamily HSC20 (HSCB), C-terminal oligomerisation domain
SCOP superfamily Spectrin repeat
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Zinc hairpin stack
SCOP superfamily YfgJ-like
SCOP superfamily Cation efflux protein transmembrane domain-like
SCOP superfamily MetI-like
SCOP superfamily SNF-like
SCOP superfamily AF1531-like
SCOP superfamily NMB0513-like
SCOP superfamily BH3703-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily AttH-like
SCOP superfamily AGR C 984p-like
SCOP superfamily BH3980-like
SCOP superfamily MPN010-like
SCOP superfamily TSP9-like
SCOP superfamily FdhE-like
SCOP superfamily ORC1-binding domain
SCOP superfamily YwmB-like
SCOP superfamily L28p-like
SCOP superfamily NAP-like
SCOP superfamily L35p-like
SCOP superfamily CAC2185-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily Nqo1C-terminal domain-like
SCOP superfamily LemA-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily MxiH-like
SCOP superfamily SPy1572-like
SCOP superfamily Expressed protein At2g23090/F21P24.15
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily DNA-binding domain of EIN3-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Hypothetical protein MG354
SCOP superfamily PhoU-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily Plexin repeat
SCOP superfamily Preprotein translocase SecY subunit
SCOP superfamily Major capsid protein VP5
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Hypothetical protein TM0160
SCOP superfamily KA1-like
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily NSFL1 (p97 ATPase) cofactor p47, SEP domain
SCOP superfamily GyrA/ParC C-terminal domain-like
SCOP superfamily Formin homology 2 domain (FH2 domain)
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily XPC-binding domain
SCOP superfamily Phosphoprotein XD domain
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Translation initiation factor 2 beta, aIF2beta, N-terminal domain

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