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Saccharomyces cerevisiae YPS163 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; Saccharomyces cerevisiae YPS163

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 3152 total
1521 (48 %) with assignment
308 average length
41 % amino acid coverage
Domains: 1979 total
546 unique superfamilies
370 unique families
264 average length
3.6 average superfamily size
72 % formed by duplication
Domain combinations: 226 domain pairs
846 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

143 124 34 10 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
45 45 9 1 SCOP 56112 Protein kinase-like (PK-like)
43 41 16 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
36 34 7 2 SCOP 50978 WD40 repeat-like
29 24 8 5 SCOP 52833 Thioredoxin-like
29 15 7 3 SCOP 53067 Actin-like ATPase domain
26 24 6 0 SCOP 103473 MFS general substrate transporter
24 21 7 1 SCOP 54928 RNA-binding domain, RBD
24 19 7 0 SCOP 57667 beta-beta-alpha zinc fingers
23 23 11 3 SCOP 48371 ARM repeat
22 22 13 3 SCOP 50249 Nucleic acid-binding proteins
21 21 2 1 SCOP 103506 Mitochondrial carrier
20 20 3 4 SCOP 53474 alpha/beta-Hydrolases
20 20 5 4 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
19 17 10 4 SCOP 46785 "Winged helix" DNA-binding domain
19 19 12 1 SCOP 57850 RING/U-box
18 18 7 4 SCOP 56784 HAD-like
18 17 5 5 SCOP 53383 PLP-dependent transferases
18 14 9 2 SCOP 48452 TPR-like
17 17 4 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
17 11 4 1 SCOP 47954 Cyclin-like
15 15 4 0 SCOP 50182 Sm-like ribonucleoproteins
13 13 8 2 SCOP 54211 Ribosomal protein S5 domain 2-like
13 13 4 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
13 13 3 1 SCOP 47113 Histone-fold
12 11 3 1 SCOP 50129 GroES-like
12 11 5 2 SCOP 52799 (Phosphotyrosine protein) phosphatases II
11 10 8 1 SCOP 51905 FAD/NAD(P)-binding domain
11 11 9 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
11 11 3 1 SCOP 46689 Homeodomain-like
11 10 4 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
11 10 7 2 SCOP 50447 Translation proteins
11 11 8 0 SCOP 46565 Chaperone J-domain
10 10 4 2 SCOP 52317 Class I glutamine amidotransferase-like
10 9 3 2 SCOP 53271 PRTase-like
10 6 3 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
10 10 6 2 SCOP 54236 Ubiquitin-like
10 9 5 1 SCOP 47473 EF-hand
10 10 7 3 SCOP 54001 Cysteine proteinases
10 10 7 1 SCOP 48403 Ankyrin repeat
10 10 6 2 SCOP 48464 ENTH/VHS domain
10 10 4 0 SCOP 57701 Zn2/Cys6 DNA-binding domain
9 8 6 2 SCOP 52374 Nucleotidylyl transferase
9 8 5 2 SCOP 54197 HIT-like
9 9 4 2 SCOP 56300 Metallo-dependent phosphatases
9 8 6 1 SCOP 58038 SNARE fusion complex
9 9 4 3 SCOP 51445 (Trans)glycosidases
9 8 7 0 SCOP 46934 UBA-like
8 8 1 0 SCOP 57829 Zn-binding ribosomal proteins
8 8 4 0 SCOP 50104 Translation proteins SH3-like domain
8 8 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
8 8 3 2 SCOP 53254 Phosphoglycerate mutase-like
8 8 3 1 SCOP 54495 UBC-like
8 8 4 2 SCOP 81296 E set domains
8 6 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
8 7 4 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
8 4 4 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
7 7 2 3 SCOP 53613 Ribokinase-like
7 7 3 3 SCOP 53098 Ribonuclease H-like
7 7 6 2 SCOP 55681 Class II aaRS and biotin synthetases
7 7 5 1 SCOP 53187 Zn-dependent exopeptidases
7 7 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
7 7 3 0 SCOP 49899 Concanavalin A-like lectins/glucanases
7 7 6 1 SCOP 57903 FYVE/PHD zinc finger
7 7 5 1 SCOP 57959 Leucine zipper domain
6 6 4 2 SCOP 53927 Cytidine deaminase-like
6 6 6 1 SCOP 55920 Creatinase/aminopeptidase
6 6 4 0 SCOP 100950 NagB/RpiA/CoA transferase-like
6 5 4 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
6 6 3 2 SCOP 55315 L30e-like
6 6 3 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
6 4 4 2 SCOP 52777 CoA-dependent acyltransferases
6 5 4 2 SCOP 50729 PH domain-like
6 6 3 1 SCOP 47661 t-snare proteins
6 6 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
6 3 1 0 SCOP 56053 Ribosomal protein L6
6 2 2 1 SCOP 53738 Phosphoglucomutase, first 3 domains
6 6 4 0 SCOP 48350 GTPase activation domain, GAP
6 4 3 0 SCOP 57756 Retrovirus zinc finger-like domains
6 3 3 1 SCOP 49493 HSP40/DnaJ peptide-binding domain
5 5 4 3 SCOP 51569 Aldolase
5 5 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
5 4 3 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
5 5 2 1 SCOP 64356 SNARE-like
5 5 3 1 SCOP 50891 Cyclophilin-like
5 5 4 2 SCOP 54427 NTF2-like
5 5 4 1 SCOP 50044 SH3-domain
5 3 3 0 SCOP 54695 POZ domain
5 4 3 1 SCOP 57783 Zinc beta-ribbon
5 5 2 2 SCOP 52467 DHS-like NAD/FAD-binding domain
5 5 1 1 SCOP 51604 Enolase C-terminal domain-like
5 5 1 1 SCOP 54826 Enolase N-terminal domain-like
5 3 2 0 SCOP 90229 CCCH zinc finger
4 4 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 3 0 SCOP 55120 Pseudouridine synthase
4 4 2 1 SCOP 52218 Flavoproteins
4 4 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
4 4 2 1 SCOP 53720 ALDH-like
4 4 4 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
4 3 2 1 SCOP 55298 YjgF-like
4 4 3 1 SCOP 50475 FMN-binding split barrel
4 4 2 0 SCOP 144122 Tim10-like
4 4 3 1 SCOP 56801 Acetyl-CoA synthetase-like
4 4 3 1 SCOP 53649 Alkaline phosphatase-like
4 4 2 1 SCOP 50630 Acid proteases
4 4 3 0 SCOP 54897 Protease propeptides/inhibitors
4 3 3 0 SCOP 57997 Tropomyosin
4 4 3 1 SCOP 52047 RNI-like
4 4 3 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
4 4 2 0 SCOP 64268 PX domain
4 4 4 0 SCOP 49879 SMAD/FHA domain
4 2 2 1 SCOP 56024 Phospholipase D/nuclease
4 4 3 1 SCOP 52743 Subtilisin-like
4 2 1 1 SCOP 54980 EF-G C-terminal domain-like
4 4 1 1 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 1 0 SCOP 51011 Glycosyl hydrolase domain
4 4 3 0 SCOP 57863 ArfGap/RecO-like zinc finger
4 4 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
4 4 2 1 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
4 2 2 0 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
4 4 4 0 SCOP 158573 GINS helical bundle-like
3 3 3 2 SCOP 51556 Metallo-dependent hydrolases
3 3 2 1 SCOP 81338 Aquaporin-like
3 3 3 1 SCOP 81606 PP2C-like
3 3 3 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
3 3 1 1 SCOP 56047 Ribosomal protein S8
3 3 3 0 SCOP 103657 BAR/IMD domain-like
3 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
3 3 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
3 2 2 0 SCOP 81333 F1F0 ATP synthase subunit C
3 3 2 0 SCOP 53850 Periplasmic binding protein-like II
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 3 1 SCOP 48150 DNA-glycosylase
3 3 2 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 0 SCOP 55811 Nudix
3 3 2 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
3 3 2 1 SCOP 47095 HMG-box
3 3 2 0 SCOP 48613 Heme oxygenase-like
3 3 2 0 SCOP 81321 Family A G protein-coupled receptor-like
3 2 2 0 SCOP 55753 Actin depolymerizing proteins
3 3 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
3 3 1 0 SCOP 46579 Prefoldin
3 3 2 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
3 3 1 0 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
3 3 3 0 SCOP 56317 Carbon-nitrogen hydrolase
3 3 1 0 SCOP 51306 LexA/Signal peptidase
3 3 2 3 SCOP 51182 RmlC-like cupins
3 3 3 1 SCOP 51197 Clavaminate synthase-like
3 3 2 1 SCOP 47072 Cysteine alpha-hairpin motif
3 3 3 1 SCOP 55159 eIF1-like
3 2 2 0 SCOP 52058 L domain-like
3 3 1 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 3 0 SCOP 144091 Rhomboid-like
3 3 2 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
3 3 3 0 SCOP 53300 vWA-like
3 1 1 0 SCOP 82153 FAS1 domain
3 3 3 2 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 3 1 SCOP 52490 Tubulin nucleotide-binding domain-like
3 3 2 1 SCOP 47616 GST C-terminal domain-like
3 3 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
3 3 2 0 SCOP 90123 ABC transporter transmembrane region
3 3 1 0 SCOP 48592 GroEL equatorial domain-like
3 3 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
3 2 2 0 SCOP 117281 Kelch motif
3 1 1 0 SCOP 49313 Cadherin-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
3 3 1 0 SCOP 52029 GroEL apical domain-like
3 3 2 0 SCOP 63380 Riboflavin synthase domain-like
3 3 2 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
3 3 3 0 SCOP 54768 dsRNA-binding domain-like
3 3 2 0 SCOP 48366 Ras GEF
3 3 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
3 3 1 1 SCOP 81271 TGS-like
3 3 2 2 SCOP 74788 Cullin repeat-like
3 3 3 1 SCOP 52087 CRAL/TRIO domain
3 3 3 1 SCOP 47769 SAM/Pointed domain
3 3 1 1 SCOP 55455 SRF-like
3 3 2 1 SCOP 75632 Cullin homology domain
3 3 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
3 3 1 0 SCOP 54849 GroEL-intermediate domain like
3 3 2 0 SCOP 89009 GAT-like domain
3 2 2 1 SCOP 144005 ORC1-binding domain
2 2 2 0 SCOP 56808 Ribosomal protein L1
2 2 2 2 SCOP 53697 SIS domain
2 2 2 2 SCOP 51366 Ribulose-phoshate binding barrel
2 2 2 0 SCOP 54570 Ribosomal protein S19
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 2 1 SCOP 54686 Ribosomal protein L16p/L10e
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 2 1 SCOP 55282 RL5-like
2 2 2 1 SCOP 53137 Translational machinery components
2 2 1 1 SCOP 103491 Preprotein translocase SecY subunit
2 2 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 1 1 1 SCOP 53784 Phosphofructokinase
2 2 1 0 SCOP 75620 Release factor
2 2 2 0 SCOP 51695 PLC-like phosphodiesterases
2 2 2 0 SCOP 55174 Alpha-L RNA-binding motif
2 2 2 1 SCOP 52161 Ribosomal protein L13
2 2 1 0 SCOP 51316 Mss4-like
2 2 1 0 SCOP 89360 HesB-like domain
2 2 2 0 SCOP 54292 2Fe-2S ferredoxin-like
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 1 1 1 SCOP 142695 RibA-like
2 2 1 1 SCOP 52096 ClpP/crotonase
2 2 1 1 SCOP 56655 Carbohydrate phosphatase
2 2 1 0 SCOP 82657 BolA-like
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 2 1 SCOP 51419 PLP-binding barrel
2 2 2 2 SCOP 56104 SAICAR synthase-like
2 2 2 0 SCOP 109604 HD-domain/PDEase-like
2 2 2 1 SCOP 48256 Citrate synthase
2 2 2 2 SCOP 140718 Mediator hinge subcomplex-like
2 2 1 0 SCOP 88723 PIN domain-like
2 2 2 1 SCOP 54534 FKBP-like
2 2 1 1 SCOP 57798 Casein kinase II beta subunit
2 2 1 1 SCOP 144000 Oxysterol-binding protein-like
2 2 1 1 SCOP 57868 Metallothionein
2 2 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 1 1 SCOP 56019 The spindle assembly checkpoint protein mad2
2 2 2 1 SCOP 48439 Protein prenylyltransferase
2 2 1 1 SCOP 52972 ITPase-like
2 1 1 1 SCOP 69645 Arp2/3 complex subunits
2 2 1 1 SCOP 48208 Six-hairpin glycosidases
2 2 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
2 2 1 0 SCOP 47694 Cytochrome c oxidase subunit h
2 2 2 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 1 1 SCOP 55257 RBP11-like subunits of RNA polymerase
2 2 2 1 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 2 1 SCOP 47576 Calponin-homology domain, CH-domain
2 2 2 1 SCOP 52768 Arginase/deacetylase
2 2 2 0 SCOP 52954 Class II aaRS ABD-related
2 2 2 0 SCOP 102712 JAB1/MPN domain
2 2 1 0 SCOP 48264 Cytochrome P450
2 2 1 1 SCOP 111352 Ammonium transporter
2 2 2 1 SCOP 51230 Single hybrid motif
2 2 2 0 SCOP 81301 Nucleotidyltransferase
2 2 1 1 SCOP 50800 PK beta-barrel domain-like
2 2 2 0 SCOP 88697 PUA domain-like
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 1 1 SCOP 52335 Methylglyoxal synthase-like
2 1 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
2 2 2 0 SCOP 55021 ACT-like
2 2 2 0 SCOP 69322 Tricorn protease domain 2
2 1 1 1 SCOP 53901 Thiolase-like
2 2 2 0 SCOP 82199 SET domain
2 2 1 0 SCOP 54626 Chalcone isomerase
2 2 2 0 SCOP 47592 SWIB/MDM2 domain
2 2 2 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
2 2 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
2 2 2 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
2 2 2 0 SCOP 160443 SMR domain-like
2 2 1 1 SCOP 52935 PK C-terminal domain-like
2 2 1 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 2 1 SCOP 81665 Calcium ATPase, transmembrane domain M
2 2 2 0 SCOP 160059 PriA/YqbF domain
2 2 2 1 SCOP 55307 Tubulin C-terminal domain-like
2 2 2 0 SCOP 81383 F-box domain
2 2 2 0 SCOP 68906 SAP domain
2 2 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 1 0 SCOP 49354 PapD-like
2 2 1 1 SCOP 56327 LDH C-terminal domain-like
2 2 2 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 2 0 SCOP 144232 HIT/MYND zinc finger-like
2 1 1 0 SCOP 52113 BRCT domain
2 2 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 2 2 1 SCOP 46938 CRAL/TRIO N-terminal domain
2 2 2 0 SCOP 118310 AN1-like Zinc finger
2 2 2 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 49348 Clathrin adaptor appendage domain
2 2 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
2 2 2 1 SCOP 48445 14-3-3 protein
2 1 1 0 SCOP 47370 Bromodomain
2 2 2 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
2 2 2 1 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 2 0 SCOP 48097 Regulator of G-protein signaling, RGS
2 2 1 1 SCOP 48425 Sec7 domain
2 2 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 1 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
2 2 2 0 SCOP 81653 Calcium ATPase, transduction domain A
2 2 2 0 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 2 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 2 SCOP 140111 Endosomal sorting complex assembly domain
2 2 1 1 SCOP 103243 KA1-like
2 2 1 1 SCOP 101489 Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
2 2 2 1 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 2 0 SCOP 111430 YAP1 redox domain
2 2 2 0 SCOP 89000 post-HMGL domain-like
2 1 1 0 SCOP 82615 Polo-box domain
2 2 1 1 SCOP 160219 AMPKBI-like
2 2 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
2 2 1 0 SCOP 57879 Zinc domain conserved in yeast copper-regulated transcription factors
1 1 1 1 SCOP 56059 Glutathione synthetase ATP-binding domain-like
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 0 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 0 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 47240 Ferritin-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 75217 alpha/beta knot
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
1 1 1 0 SCOP 51730 FAD-linked oxidoreductase
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 54862 4Fe-4S ferredoxins
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 102114 Radical SAM enzymes
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 1 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 1 SCOP 144217 CSL zinc finger
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 0 SCOP 143744 GlcG-like
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 1 SCOP 56672 DNA/RNA polymerases
1 1 1 0 SCOP 160683 YNR034W-A-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
1 1 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
1 1 1 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 1 SCOP 53590 Nucleoside hydrolase
1 1 1 1 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 46626 Cytochrome c
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 1 SCOP 49785 Galactose-binding domain-like
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
1 1 1 1 SCOP 144210 Nop10-like SnoRNP
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 74650 Galactose mutarotase-like
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 1 SCOP 47819 HRDC-like
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
1 1 1 1 SCOP 55781 GAF domain-like
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 1 SCOP 48113 Heme-dependent peroxidases
1 1 1 1 SCOP 49777 PEBP-like
1 1 1 0 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 1 SCOP 89975 Hypothetical protein Yml108w
1 1 1 1 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 1 SCOP 56529 FAH
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 55008 HMA, heavy metal-associated domain
1 1 1 0 SCOP 55961 Bet v1-like
1 1 1 1 SCOP 55418 eIF4e-like
1 1 1 1 SCOP 55770 Profilin (actin-binding protein)
1 1 1 0 SCOP 52266 SGNH hydrolase
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 52151 FabD/lysophospholipase-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 55909 Pentein
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
1 1 1 0 SCOP 55931 Glutamine synthetase/guanido kinase
1 1 1 0 SCOP 46458 Globin-like
1 1 1 1 SCOP 54631 CBS-domain pair
1 1 1 0 SCOP 52172 CheY-like
1 1 1 1 SCOP 102405 MCP/YpsA-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 1 SCOP 55724 Mog1p/PsbP-like
1 1 1 0 SCOP 50494 Trypsin-like serine proteases
1 1 1 1 SCOP 52016 LeuD/IlvD-like
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 50692 ADC-like
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 142338 CofD-like
1 1 1 0 SCOP 100939 SPOC domain-like
1 1 1 0 SCOP 82171 DPP6 N-terminal domain-like
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 1 SCOP 89124 Nop domain
1 1 1 0 SCOP 111321 AF1104-like
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 1 SCOP 46548 alpha-helical ferredoxin
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 49401 Bacterial adhesins
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 50156 PDZ domain-like
1 1 1 0 SCOP 51246 Rudiment single hybrid motif
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 56176 FAD-binding/transporter-associated domain-like
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 52922 TK C-terminal domain-like
1 1 1 0 SCOP 50965 Galactose oxidase, central domain
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 52129 Caspase-like
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 52440 PreATP-grasp domain
1 1 1 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 1 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 143968 UbiD C-terminal domain-like
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 1 SCOP 48225 Seven-hairpin glycosidases
1 1 1 1 SCOP 56042 PurM C-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 54616 DNA-binding domain of Mlu1-box binding protein MBP1
1 1 1 1 SCOP 55326 PurM N-terminal domain-like
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 117289 Nucleoporin domain
1 1 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
1 1 1 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 48065 DBL homology domain (DH-domain)
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 50677 ValRS/IleRS/LeuRS editing domain
1 1 1 0 SCOP 63748 Tudor/PWWP/MBT
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
1 1 1 0 SCOP 74924 Cap-Gly domain
1 1 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82708 R3H domain
1 1 1 1 SCOP 82061 BAH domain
1 1 1 1 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 101152 Mob1/phocein
1 1 1 1 SCOP 49417 p53-like transcription factors
1 1 1 1 SCOP 69000 FAD-dependent thiol oxidase
1 1 1 0 SCOP 47895 Transducin (alpha subunit), insertion domain
1 1 1 0 SCOP 82109 MIR domain
1 1 1 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
1 1 1 0 SCOP 116846 MIT domain
1 1 1 0 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
1 1 1 0 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
1 1 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
1 1 1 0 SCOP 52025 PA domain
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
1 1 1 0 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 51045 WW domain
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 1 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 81698 FF domain
1 1 1 0 SCOP 109715 DEK C-terminal domain
1 1 1 0 SCOP 47157 Mitochondrial import receptor subunit Tom20
1 1 1 0 SCOP 54556 Chitinase insertion domain
1 1 1 0 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 1 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 0 SCOP 55277 GYF domain
1 1 1 0 SCOP 69848 LCCL domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 1 SCOP 63887 P-domain of calnexin/calreticulin
1 1 1 1 SCOP 54585 Cdc48 domain 2-like
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 1 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 82919 Zn-finger domain of Sec23/24
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 48686 Proteinase A inhibitor IA3
1 1 1 1 SCOP 143026 Kinetochore globular domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily YajQ-like
SCOP superfamily Amyloid beta a4 protein copper binding domain (domain 2)
SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily AlbA-like
SCOP superfamily Heme chaperone CcmE
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily HCP-like
SCOP superfamily Helical domain of Sec23/24
SCOP superfamily PAP/OAS1 substrate-binding domain
SCOP superfamily PsbU/PolX domain-like
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIb
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Voltage-gated potassium channels
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Translin
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Integrin alpha N-terminal domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Cysteine-rich domain
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily BPTI-like
SCOP superfamily Elafin-like
SCOP superfamily EGF/Laminin
SCOP superfamily Growth factor receptor domain
SCOP superfamily C-type lectin-like
SCOP superfamily ADC synthase
SCOP superfamily DNA clamp
SCOP superfamily PYP-like sensor domain (PAS domain)
SCOP superfamily L9 N-domain-like
SCOP superfamily Probable ACP-binding domain of malonyl-CoA ACP transacylase
SCOP superfamily Tubby C-terminal domain-like
SCOP superfamily Penicillin-binding protein 2x (pbp-2x), c-terminal domain
SCOP superfamily Chromo domain-like
SCOP superfamily RNase A-like
SCOP superfamily E2 regulatory, transactivation domain
SCOP superfamily TRAP-like
SCOP superfamily An insect antifreeze protein
SCOP superfamily Pectin lyase-like
SCOP superfamily C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
SCOP superfamily YVTN repeat-like/Quinoprotein amine dehydrogenase
SCOP superfamily Lipocalins
SCOP superfamily N-terminal domains of the minor coat protein g3p
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Osmotin, thaumatin-like protein
SCOP superfamily TNF-like
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily Cna protein B-type domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily Chorismate mutase II
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily TrpR-like
SCOP superfamily Carbamoyl phosphate synthetase, large subunit connection domain
SCOP superfamily Annexin
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily ROP protein
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Spectrin repeat
SCOP superfamily ARID-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily YacF-like
SCOP superfamily BLRF2-like
SCOP superfamily BH3703-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily MM3350-like
SCOP superfamily PA1994-like
SCOP superfamily Dom34/Pelota N-terminal domain-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily DsbB-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Eferin C-derminal domain-like
SCOP superfamily TSP9-like
SCOP superfamily NOB1 zinc finger-like
SCOP superfamily CorA soluble domain-like
SCOP superfamily Transposase IS200-like
SCOP superfamily NAP-like
SCOP superfamily CAC2185-like
SCOP superfamily Pentapeptide repeat-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EF2947-like
SCOP superfamily LemA-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily MxiH-like
SCOP superfamily SPy1572-like
SCOP superfamily Expressed protein At2g23090/F21P24.15
SCOP superfamily Proton glutamate symport protein
SCOP superfamily WWE domain
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily QueA-like
SCOP superfamily Recombination protein RecR
SCOP superfamily YggX-like
SCOP superfamily VPS9 domain
SCOP superfamily PhoU-like
SCOP superfamily KRAB domain (Kruppel-associated box)
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily Plexin repeat
SCOP superfamily Major capsid protein VP5
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily CheC-like
SCOP superfamily Stathmin
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily XPC-binding domain
SCOP superfamily PWI domain
SCOP superfamily Chemosensory protein Csp2

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