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Mycoplasma hyopneumoniae 168 family assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; Mycoplasma hyopneumoniae; Mycoplasma hyopneumoniae 168

Downloads
Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 693 total
437 (63 %) with assignment
379 average length
48 % amino acid coverage
Domains: 639 total
282 unique superfamilies
125 unique families
289 average length
2.3 average superfamily size
56 % formed by duplication
Domain combinations: 141 domain pairs
302 unique architectures

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Family assignments

Domains

Proteins

SCOP link

Families

10 10 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
7 7 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
7 7 SCOP 52686 ABC transporter ATPase domain-like
6 6 SCOP 52592 G proteins
5 5 SCOP 52670 RecA protein-like (ATPase-domain)
5 3 SCOP 81268 Tandem AAA-ATPase domain
5 4 SCOP 81269 Extended AAA-ATPase domain
3 3 SCOP 52652 Nitrogenase iron protein-like
3 3 SCOP 53272 Phosphoribosyltransferases (PRTases)
2 2 SCOP 50282 Cold shock DNA-binding domain-like
2 2 SCOP 50448 Elongation factors
2 2 SCOP 50678 ValRS/IleRS/LeuRS editing domain
2 2 SCOP 51591 Class II FBP aldolase
2 2 SCOP 52541 Nucleotide and nucleoside kinases
2 1 SCOP 53068 Actin/HSP70
2 1 SCOP 53080 Acetokinase-like
2 1 SCOP 53089 Glycerol kinase
2 2 SCOP 54212 Translational machinery components
2 2 SCOP 55879 DNA gyrase/MutL, N-terminal domain
2 2 SCOP 55921 Creatinase/aminopeptidase
2 2 SCOP 56720 Type II DNA topoisomerase
2 2 SCOP 143642 LplA-like
1 1 SCOP 46947 Ribosomal protein S13
1 1 SCOP 47253 Ribonucleotide reductase-like
1 1 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
1 1 SCOP 47918 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48169 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50325 Inorganic pyrophosphatase
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 51191 Type I phosphomannose isomerase
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
1 1 SCOP 51375 Decarboxylase
1 1 SCOP 51396 FMN-linked oxidoreductases
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51605 Enolase
1 1 SCOP 51622 Pyruvate kinase
1 1 SCOP 51659 Endonuclease IV
1 1 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
1 1 SCOP 51848 LDH N-terminal domain-like
1 1 SCOP 52002 R1 subunit of ribonucleotide reductase, C-terminal domain
1 1 SCOP 52081 Ribosomal proteins L15p and L18e
1 1 SCOP 52142 Uracil-DNA glycosylase
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52318 Class I glutamine amidotransferases (GAT)
1 1 SCOP 52403 N-type ATP pyrophosphatases
1 1 SCOP 52419 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 SCOP 52513 NagB-like
1 1 SCOP 52778 CAT-like
1 1 SCOP 53138 Ribosomal protein L18 and S11
1 1 SCOP 53168 Purine and uridine phosphorylases
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53201 Leucine aminopeptidase, C-terminal domain
1 1 SCOP 53204 Bacterial dinuclear zinc exopeptidases
1 1 SCOP 53296 Phosphoribosylpyrophosphate synthetase-like
1 1 SCOP 53402 Cystathionine synthase-like
1 1 SCOP 53417 GABA-aminotransferase-like
1 1 SCOP 53640 AraD-like aldolase/epimerase
1 1 SCOP 53701 Phosphoglucose isomerase, PGI
1 1 SCOP 53721 ALDH-like
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53785 Phosphofructokinase
1 1 SCOP 53823 L-arabinose binding protein-like
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54822 Ribosomal protein S3 C-terminal domain
1 1 SCOP 54844 Ribosomal protein L22
1 1 SCOP 54981 EF-G/eEF-2 domains III and V
1 1 SCOP 55178 Ribosomal protein S4
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55348 GAPDH-like
1 1 SCOP 55425 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 SCOP 55974 S-adenosylmethionine synthetase
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56054 Ribosomal protein L6
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56328 Lactate & malate dehydrogenases, C-terminal domain
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 64159 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 SCOP 64162 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 75041 SelR domain
1 1 SCOP 75218 SpoU-like RNA 2'-O ribose methyltransferase
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 75459 Pseudouridine synthase RsuA/RluD
1 1 SCOP 75554 Smc hinge domain
1 1 SCOP 75621 Release factor
1 1 SCOP 75626 YebC-like
1 1 SCOP 81768 Pre-protein crosslinking domain of SecA
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 82583 G domain-linked domain
1 1 SCOP 88735 TK-like Pyr module
1 1 SCOP 88741 Branched-chain alpha-keto acid dehydrogenase Pyr module
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 88766 Branched-chain alpha-keto acid dehydrogenase PP module
1 1 SCOP 88788 N6 adenine-specific DNA methylase, DAM
1 1 SCOP 88947 Sigma2 domain of RNA polymerase sigma factors
1 1 SCOP 89624 Ribose/Galactose isomerase RpiB/AlsB
1 1 SCOP 89629 tRNA(m1G37)-methyltransferase TrmD
1 1 SCOP 100888 Lesion bypass DNA polymerase (Y-family), catalytic domain
1 1 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101905 GyrA/ParC C-terminal domain-like
1 1 SCOP 102663 Phosphotransacetylase
1 1 SCOP 102769 ATP-dependent protease Lon (La), catalytic domain
1 1 SCOP 117558 Type II thymidine kinase
1 1 SCOP 117888 Ribosomal protein L16p
1 1 SCOP 140991 FtsH protease domain-like
1 1 SCOP 141245 Ribosomal protein L19
1 1 SCOP 142647 TrmB-like
1 1 SCOP 142721 PyrH-like
1 1 SCOP 142735 DeoB catalytic domain-like
1 1 SCOP 143812 GatB/GatE catalytic domain-like
1 1 SCOP 143857 DeoB insert domain-like
1 1 SCOP 159112 RNB domain-like

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The following families have one or more weak hits:

SCOP family MetI-like
SCOP family MgtE membrane domain-like
SCOP family AF1531-like
SCOP family Ribosomal protein L10-like
SCOP family PTS system, Fructose specific IIB subunit-like
SCOP family AlaX-M N-terminal domain-like
SCOP family MgtE N-terminal domain-like
SCOP family Jann4075-like
SCOP family RpiR-like
SCOP family Ribosomal protein L33p
SCOP family Ribosomal protein L32p
SCOP family Ribosomal protein L31p
SCOP family Ribosomal protein L28
SCOP family YojJ-like
SCOP family SP1160 C-terminal domain-like
SCOP family Ribosomal protein L35p
SCOP family YhhF-like
SCOP family N-6 DNA Methylase-like
SCOP family CinA-like
SCOP family Ribosomal protein L21p
SCOP family LemA-like
SCOP family HSP33 redox switch-like
SCOP family TrmE formyl-THF-binding domain
SCOP family RecU-like
SCOP family TrmE connector domain
SCOP family ScpB/YpuH-like
SCOP family Recombination protein RecR
SCOP family ROK
SCOP family YeaZ-like
SCOP family Flavoprotein NrdI
SCOP family Ribosomal L27 protein
SCOP family Heat-inducible transcription repressor HrcA, N-terminal domain
SCOP family Preprotein translocase SecY subunit
SCOP family Predicted metal-dependent hydrolase
SCOP family NifU/IscU domain
SCOP family YigZ N-terminal domain-like
SCOP family Obg GTP-binding protein C-terminal domain
SCOP family Trigger factor ribosome-binding domain
SCOP family NIF3 (NGG1p interacting factor 3)-like
SCOP family Putative Holliday junction resolvase RuvX
SCOP family Hypothetical protein MraZ
SCOP family Aminopeptidase/glucanase lid domain
SCOP family Heat shock protein 70kD (HSP70), C-terminal subdomain
SCOP family ABC transporter transmembrane region
SCOP family Ribosome-binding factor A, RbfA
SCOP family YggJ C-terminal domain-like
SCOP family Glycerophosphoryl diester phosphodiesterase
SCOP family YhcH-like
SCOP family C5 cytosine-specific DNA methylase, DCM
SCOP family rRNA adenine dimethylase-like
SCOP family Pyruvate oxidase and decarboxylase PP module
SCOP family Pyruvate oxidase and decarboxylase Pyr module
SCOP family Sigma4 domain
SCOP family Sigma3 domain
SCOP family Multidrug efflux transporter AcrB transmembrane domain
SCOP family GIY-YIG endonuclease
SCOP family N-utilization substance G protein NusG, N-terminal domain
SCOP family YbaB-like
SCOP family MraW-like putative methyltransferases
SCOP family Predicted hydrolases Cof
SCOP family YbeA-like
SCOP family PP-loop ATPase
SCOP family N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
SCOP family Obg GTP-binding protein N-terminal domain
SCOP family Helical scaffold and wing domains of SecA
SCOP family Mannitol 2-dehydrogenase
SCOP family Putative methyltransferase TM0872, insert domain
SCOP family Chromosomal replication initiation factor DnaA C-terminal domain IV
SCOP family Calcium ATPase, transmembrane domain M
SCOP family Meta-cation ATPase, catalytic domain P
SCOP family Calcium ATPase, transduction domain A
SCOP family Valyl-tRNA synthetase (ValRS) C-terminal domain
SCOP family C-terminal, Zn-finger domain of MutM-like DNA repair proteins
SCOP family Middle domain of MutM-like DNA repair proteins
SCOP family N-terminal domain of MutM-like DNA repair proteins
SCOP family F1F0 ATP synthase subunit A
SCOP family F1F0 ATP synthase subunit C
SCOP family RNA 2'-O ribose methyltransferase substrate binding domain
SCOP family Glucose-inhibited division protein B (GidB)
SCOP family Small protein B (SmpB)
SCOP family Ribosomal protein L20
SCOP family Transcription factor NusA, N-terminal domain
SCOP family mono-SIS domain
SCOP family RNase III catalytic domain-like
SCOP family C-terminal domain of ProRS
SCOP family Hsp33 domain
SCOP family YlxR-like
SCOP family Prokaryotic ribosomal protein L17
SCOP family Sir2 family of transcriptional regulators
SCOP family Potassium channel NAD-binding domain
SCOP family Prokaryotic PEBP-like proteins
SCOP family Coiled-coil domain of nucleotide exchange factor GrpE
SCOP family Tropomyosin
SCOP family DnaJ/Hsp40 cysteine-rich domain
SCOP family Ribosomal protein L36
SCOP family DNA primase zinc finger
SCOP family Microbial and mitochondrial ADK, insert "zinc finger" domain
SCOP family Ribosomal protein S14
SCOP family Aquaporin-like
SCOP family DNA primase DnaG catalytic core
SCOP family Insert subdomain of RNA polymerase alpha subunit
SCOP family 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
SCOP family YrdC-like
SCOP family 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP family IIA domain of mannitol-specific and ntr phosphotransferase EII
SCOP family Ribosomal protein L9 N-domain
SCOP family Ribosomal protein L9 C-domain
SCOP family Glucose permease domain IIB
SCOP family HPr-like
SCOP family Glucose 6-phosphate dehydrogenase-like
SCOP family Tubulin, C-terminal domain
SCOP family GAD domain
SCOP family RNA polymerase alpha subunit dimerisation domain
SCOP family Translation initiation factor IF3, C-terminal domain
SCOP family Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP family Ribosomal protein S10
SCOP family Ribosomal protein S6
SCOP family Enolase N-terminal domain-like
SCOP family Prokaryotic type KH domain (KH-domain type II)
SCOP family Ribosomal S5 protein, N-terminal domain
SCOP family RecA protein, C-terminal domain
SCOP family Ribosomal L11/L12e N-terminal domain
SCOP family Ribosomal protein L7/12, C-terminal domain
SCOP family Elongation factor Ts (EF-Ts), dimerisation domain
SCOP family Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP family CBS-domain pair
SCOP family Ribosomal protein S19
SCOP family Ribosomal protein S16
SCOP family GreA transcript cleavage factor, C-terminal domain
SCOP family FKBP immunophilin/proline isomerase
SCOP family Translation initiation factor IF3, N-terminal domain
SCOP family RNase P protein
SCOP family HIT (HINT, histidine triad) family of protein kinase-interacting proteins
SCOP family L23p
SCOP family Cytidine deaminase
SCOP family Phosphate binding protein-like
SCOP family Tetrapyrrole methylase
SCOP family Ribokinase-like
SCOP family DnaQ-like 3'-5' exonuclease
SCOP family Ribonuclease H
SCOP family Creatinase/prolidase N-terminal domain
SCOP family 5' to 3' exonuclease catalytic domain
SCOP family Anticodon-binding domain of Class II aaRS
SCOP family ATP synthase (F1-ATPase), gamma subunit
SCOP family Pyruvate kinase, C-terminal domain
SCOP family Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
SCOP family Transketolase C-terminal domain-like
SCOP family Glutathione peroxidase-like
SCOP family PTS system, Lactose/Cellobiose specific IIB subunit
SCOP family Subtilases
SCOP family Tubulin, GTPase domain
SCOP family Pyruvate oxidase and decarboxylase, middle domain
SCOP family Adenylyltransferase
SCOP family DJ-1/PfpI
SCOP family Quinone reductase
SCOP family Initiation factor IF2/eIF5b, domain 3
SCOP family DNA ligase
SCOP family N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system
SCOP family FAD/NAD-linked reductases, N-terminal and central domains
SCOP family FAD-linked reductases, N-terminal domain
SCOP family NadC C-terminal domain-like
SCOP family Pyruvate phosphate dikinase, C-terminal domain
SCOP family Phosphotriesterase-like
SCOP family Amylase, catalytic domain
SCOP family Glucose permease-like
SCOP family Biotinyl/lipoyl-carrier proteins and domains
SCOP family Head domain of nucleotide exchange factor GrpE
SCOP family Pyruvate kinase beta-barrel domain
SCOP family N-terminal domain of alpha and beta subunits of F1 ATP synthase
SCOP family Prokaryotic proteases
SCOP family DNA ligase/mRNA capping enzyme postcatalytic domain
SCOP family Myf domain
SCOP family Single strand DNA-binding domain, SSB
SCOP family Anticodon-binding domain
SCOP family Staphylococcal nuclease
SCOP family Alcohol dehydrogenase-like, N-terminal domain
SCOP family eIF5a N-terminal domain-like
SCOP family Ribosomal proteins L24p and L21e
SCOP family HSP40/DnaJ peptide-binding domain
SCOP family Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SCOP family N-terminal domain of DnaB helicase
SCOP family Antitermination factor NusB
SCOP family N-terminal domain of the delta subunit of the F1F0-ATP synthase
SCOP family Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP family 5' to 3' exonuclease, C-terminal subdomain
SCOP family C-terminal domain of RNA polymerase alpha subunit
SCOP family NAD+-dependent DNA ligase, domain 3
SCOP family DNA helicase RuvA subunit, middle domain
SCOP family Prokaryotic DNA-bending protein
SCOP family Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
SCOP family Signal peptide-binding domain
SCOP family Domain of the SRP/SRP receptor G-proteins
SCOP family Ferritin
SCOP family Ribosomal protein S15
SCOP family Ribosomal protein S20
SCOP family Ribosomal protein S18
SCOP family Ribosomal protein L11, C-terminal domain
SCOP family Helicase DNA-binding domain
SCOP family C-terminal UvrC-binding domain of UvrB
SCOP family Chaperone J-domain
SCOP family Ribosomal protein L29 (L29p)
SCOP family GreA transcript cleavage protein, N-terminal domain

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