SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Clostridium perfringens str. 13 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium perfringens; Clostridium perfringens str. 13

Downloads
Fasta format sequences
Domain assignments


Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 2723 total
1821 (67 %) with assignment
314 average length
63 % amino acid coverage
Domains: 2752 total
656 unique superfamilies
462 unique families
295 average length
4.2 average superfamily size
76 % formed by duplication
Domain combinations: 439 domain pairs
951 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

213 187 70 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
67 64 26 2 SCOP 46785 "Winged helix" DNA-binding domain
46 25 25 2 SCOP 49785 Galactose-binding domain-like
43 42 15 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
40 33 23 2 SCOP 50249 Nucleic acid-binding proteins
40 22 8 5 SCOP 53067 Actin-like ATPase domain
39 39 26 8 SCOP 51445 (Trans)glycosidases
32 32 14 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
31 31 8 8 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
28 20 12 0 SCOP 46689 Homeodomain-like
27 27 8 1 SCOP 53850 Periplasmic binding protein-like II
27 25 5 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
26 22 11 1 SCOP 51905 FAD/NAD(P)-binding domain
26 26 2 4 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
25 24 6 1 SCOP 161098 MetI-like
24 24 5 4 SCOP 53383 PLP-dependent transferases
24 24 6 2 SCOP 102114 Radical SAM enzymes
22 22 5 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
22 21 17 6 SCOP 54211 Ribosomal protein S5 domain 2-like
22 22 6 1 SCOP 52172 CheY-like
21 21 5 2 SCOP 56784 HAD-like
19 19 7 2 SCOP 53187 Zn-dependent exopeptidases
17 17 13 2 SCOP 52374 Nucleotidylyl transferase
17 17 6 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
16 14 6 0 SCOP 48452 TPR-like
15 14 3 1 SCOP 52833 Thioredoxin-like
15 15 9 4 SCOP 52402 Adenine nucleotide alpha hydrolases-like
15 14 11 2 SCOP 50447 Translation proteins
15 15 8 0 SCOP 47413 lambda repressor-like DNA-binding domains
14 14 9 1 SCOP 52317 Class I glutamine amidotransferase-like
14 13 5 2 SCOP 53271 PRTase-like
14 13 10 0 SCOP 54862 4Fe-4S ferredoxins
14 14 8 2 SCOP 56601 beta-lactamase/transpeptidase-like
14 14 5 1 SCOP 46894 C-terminal effector domain of the bipartite response regulators
13 11 6 0 SCOP 56300 Metallo-dependent phosphatases
13 11 4 5 SCOP 100950 NagB/RpiA/CoA transferase-like
13 13 3 1 SCOP 103473 MFS general substrate transporter
13 13 10 1 SCOP 55681 Class II aaRS and biotin synthetases
13 13 5 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
13 13 4 1 SCOP 88713 Glycoside hydrolase/deacetylase
12 12 2 1 SCOP 53474 alpha/beta-Hydrolases
12 12 5 1 SCOP 55174 Alpha-L RNA-binding motif
12 12 7 1 SCOP 109604 HD-domain/PDEase-like
12 12 2 1 SCOP 53822 Periplasmic binding protein-like I
12 9 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
12 12 2 1 SCOP 90123 ABC transporter transmembrane region
12 7 5 1 SCOP 54980 EF-G C-terminal domain-like
12 11 11 0 SCOP 49265 Fibronectin type III
12 12 6 0 SCOP 51011 Glycosyl hydrolase domain
11 11 6 8 SCOP 51556 Metallo-dependent hydrolases
11 11 2 3 SCOP 53613 Ribokinase-like
11 11 3 2 SCOP 47240 Ferritin-like
11 11 8 3 SCOP 53098 Ribonuclease H-like
11 11 5 0 SCOP 89550 PHP domain-like
10 10 1 4 SCOP 51569 Aldolase
10 10 4 1 SCOP 56112 Protein kinase-like (PK-like)
10 10 4 0 SCOP 52218 Flavoproteins
10 10 2 0 SCOP 55811 Nudix
10 10 2 2 SCOP 56796 Dehydroquinate synthase-like
10 10 9 1 SCOP 54631 CBS-domain pair
10 10 4 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
10 5 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
10 10 3 0 SCOP 158472 HAMP domain-like
9 8 7 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
9 9 4 3 SCOP 55120 Pseudouridine synthase
9 9 2 3 SCOP 51161 Trimeric LpxA-like enzymes
9 9 6 1 SCOP 74650 Galactose mutarotase-like
9 9 4 0 SCOP 51306 LexA/Signal peptidase
9 4 3 2 SCOP 63411 LuxS/MPP-like metallohydrolase
9 9 4 0 SCOP 57802 Rubredoxin-like
9 7 5 0 SCOP 55785 PYP-like sensor domain (PAS domain)
9 9 6 0 SCOP 55021 ACT-like
9 8 8 1 SCOP 47781 RuvA domain 2-like
8 5 5 3 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
8 8 3 4 SCOP 52096 ClpP/crotonase
8 8 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
8 8 4 2 SCOP 53649 Alkaline phosphatase-like
8 8 3 4 SCOP 51182 RmlC-like cupins
8 8 8 0 SCOP 49899 Concanavalin A-like lectins/glucanases
8 4 1 0 SCOP 56024 Phospholipase D/nuclease
8 7 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
8 6 6 1 SCOP 69360 Cell wall binding repeat
8 8 4 0 SCOP 116726 TrkA C-terminal domain-like
8 8 6 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
8 7 3 1 SCOP 63380 Riboflavin synthase domain-like
7 7 4 1 SCOP 53790 Tetrapyrrole methylase
7 7 3 2 SCOP 53697 SIS domain
7 5 4 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
7 7 6 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
7 5 2 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
7 7 1 0 SCOP 51206 cAMP-binding domain-like
7 7 3 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
7 7 5 0 SCOP 46548 alpha-helical ferredoxin
7 7 5 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
7 7 4 0 SCOP 50156 PDZ domain-like
7 7 2 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
7 7 7 1 SCOP 55545 beta-N-acetylhexosaminidase-like domain
6 6 1 1 SCOP 53167 Purine and uridine phosphorylases
6 6 4 2 SCOP 50104 Translation proteins SH3-like domain
6 6 3 3 SCOP 75217 alpha/beta knot
6 6 2 0 SCOP 51261 Duplicated hybrid motif
6 6 3 0 SCOP 81296 E set domains
6 4 3 0 SCOP 50044 SH3-domain
6 4 3 0 SCOP 55008 HMA, heavy metal-associated domain
6 2 2 0 SCOP 49478 Cna protein B-type domain
6 6 5 1 SCOP 55073 Nucleotide cyclase
6 6 2 4 SCOP 51998 PFL-like glycyl radical enzymes
6 5 4 1 SCOP 143414 CcmK-like
6 6 1 1 SCOP 53807 "Helical backbone" metal receptor
6 6 4 2 SCOP 81301 Nucleotidyltransferase
6 6 3 0 SCOP 55604 Glucose permease domain IIB
6 4 2 2 SCOP 53901 Thiolase-like
6 6 2 0 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
6 6 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
6 6 1 0 SCOP 52743 Subtilisin-like
6 5 4 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
6 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
6 6 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
6 3 1 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
5 5 3 3 SCOP 53927 Cytidine deaminase-like
5 5 4 1 SCOP 55920 Creatinase/aminopeptidase
5 5 4 2 SCOP 64182 DHH phosphoesterases
5 5 2 1 SCOP 51658 Xylose isomerase-like
5 5 2 2 SCOP 82549 DAK1/DegV-like
5 5 3 1 SCOP 53720 ALDH-like
5 5 4 0 SCOP 54534 FKBP-like
5 5 4 0 SCOP 54001 Cysteine proteinases
5 4 4 0 SCOP 52266 SGNH hydrolase
5 5 4 1 SCOP 46955 Putative DNA-binding domain
5 4 4 1 SCOP 57783 Zinc beta-ribbon
5 4 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 5 2 1 SCOP 63817 Sortase
5 4 3 0 SCOP 50346 PRC-barrel domain
5 5 4 1 SCOP 56176 FAD-binding/transporter-associated domain-like
5 5 5 1 SCOP 49384 Carbohydrate-binding domain
5 5 3 1 SCOP 81665 Calcium ATPase, transmembrane domain M
5 2 2 0 SCOP 158911 NEAT domain-like
5 4 3 1 SCOP 52440 PreATP-grasp domain
5 3 3 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
5 4 3 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
5 5 3 0 SCOP 81653 Calcium ATPase, transduction domain A
5 5 3 0 SCOP 56519 Penicillin binding protein dimerisation domain
5 5 5 1 SCOP 140657 Hyaluronidase post-catalytic domain-like
4 4 1 2 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 4 0 SCOP 52980 Restriction endonuclease-like
4 4 2 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
4 4 2 2 SCOP 53633 Carbamate kinase-like
4 4 1 1 SCOP 51395 FMN-linked oxidoreductases
4 4 3 1 SCOP 51419 PLP-binding barrel
4 4 3 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
4 4 3 0 SCOP 50182 Sm-like ribonucleoproteins
4 4 2 0 SCOP 55315 L30e-like
4 4 3 1 SCOP 48208 Six-hairpin glycosidases
4 1 1 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
4 4 3 0 SCOP 52954 Class II aaRS ABD-related
4 4 4 2 SCOP 52467 DHS-like NAD/FAD-binding domain
4 4 4 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 4 4 1 SCOP 53955 Lysozyme-like
4 4 3 1 SCOP 50800 PK beta-barrel domain-like
4 4 1 1 SCOP 118215 Proton glutamate symport protein
4 4 1 1 SCOP 64288 Chorismate lyase-like
4 4 2 0 SCOP 53062 PTS system fructose IIA component-like
4 4 4 1 SCOP 55186 ThrRS/AlaRS common domain
4 3 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 3 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
4 4 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
4 4 2 1 SCOP 52728 PTS IIb component
4 4 1 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 4 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 2 1 0 SCOP 51971 Nucleotide-binding domain
4 4 3 1 SCOP 48334 DNA repair protein MutS, domain III
4 3 2 1 SCOP 56042 PurM C-terminal domain-like
4 3 3 1 SCOP 101904 GyrA/ParC C-terminal domain-like
4 3 2 1 SCOP 55326 PurM N-terminal domain-like
4 4 4 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
4 4 3 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 1 1 SCOP 56420 Peptide deformylase
3 3 2 2 SCOP 51366 Ribulose-phoshate binding barrel
3 3 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 1 1 SCOP 53784 Phosphofructokinase
3 3 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
3 2 2 0 SCOP 81333 F1F0 ATP synthase subunit C
3 3 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
3 3 2 1 SCOP 50715 Ribosomal protein L25-like
3 3 1 1 SCOP 55205 EPT/RTPC-like
3 3 2 0 SCOP 50685 Barwin-like endoglucanases
3 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
3 3 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
3 3 3 1 SCOP 88723 PIN domain-like
3 3 3 0 SCOP 47819 HRDC-like
3 3 2 1 SCOP 52151 FabD/lysophospholipase-like
3 3 3 2 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 1 1 SCOP 143422 Transposase IS200-like
3 3 3 0 SCOP 141868 EAL domain-like
3 3 3 1 SCOP 53795 PEP carboxykinase-like
3 3 2 0 SCOP 54909 Dimeric alpha+beta barrel
3 3 2 0 SCOP 56349 DNA breaking-rejoining enzymes
3 3 2 0 SCOP 53300 vWA-like
3 3 2 1 SCOP 81340 Clc chloride channel
3 3 1 1 SCOP 56219 DNase I-like
3 3 2 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
3 3 3 0 SCOP 88697 PUA domain-like
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 3 2 SCOP 52335 Methylglyoxal synthase-like
3 3 1 1 SCOP 53163 HybD-like
3 3 1 0 SCOP 50331 MOP-like
3 3 3 0 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
3 3 3 1 SCOP 46565 Chaperone J-domain
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 52794 PTS system IIB component-like
3 2 2 0 SCOP 81923 Double Clp-N motif
3 3 2 0 SCOP 69304 Tricorn protease N-terminal domain
3 3 3 1 SCOP 48537 Phospholipase C/P1 nuclease
3 3 3 1 SCOP 52922 TK C-terminal domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 1 0 SCOP 51215 Regulatory protein AraC
3 3 2 2 SCOP 50621 Alanine racemase C-terminal domain-like
3 3 3 1 SCOP 53920 Fe-only hydrogenase
3 3 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
3 3 3 0 SCOP 63446 Type I dockerin domain
3 3 2 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 3 1 SCOP 81271 TGS-like
3 3 2 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
3 2 2 0 SCOP 55666 Ribonuclease PH domain 2-like
3 3 1 1 SCOP 101821 Aminopeptidase/glucanase lid domain
3 3 1 1 SCOP 160996 HI0933 insert domain-like
2 2 2 0 SCOP 48013 NusB-like
2 2 1 1 SCOP 81338 Aquaporin-like
2 2 2 0 SCOP 55594 HPr-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 1 SCOP 143597 YojJ-like
2 2 2 1 SCOP 81606 PP2C-like
2 2 1 2 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 2 2 0 SCOP 89447 AbrB/MazE/MraZ-like
2 2 2 1 SCOP 53597 Dihydrofolate reductase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 1 SCOP 51695 PLC-like phosphodiesterases
2 2 2 1 SCOP 82649 SufE/NifU
2 2 2 1 SCOP 109755 PhoU-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 48557 L-aspartase-like
2 2 2 2 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 2 0 SCOP 51283 dUTPase-like
2 2 2 1 SCOP 48150 DNA-glycosylase
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 53254 Phosphoglycerate mutase-like
2 2 2 0 SCOP 75169 DsrEFH-like
2 2 1 0 SCOP 50475 FMN-binding split barrel
2 2 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 2 2 SCOP 56672 DNA/RNA polymerases
2 2 1 2 SCOP 48613 Heme oxygenase-like
2 2 2 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
2 2 1 1 SCOP 50891 Cyclophilin-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 1 0 SCOP 55144 LigT-like
2 2 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
2 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 1 2 SCOP 52972 ITPase-like
2 2 2 0 SCOP 55781 GAF domain-like
2 2 2 0 SCOP 110849 ParB/Sulfiredoxin
2 2 1 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
2 2 1 1 SCOP 55909 Pentein
2 2 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
2 2 2 0 SCOP 52091 SpoIIaa-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 2 0 SCOP 103642 Sec-C motif
2 2 2 0 SCOP 141571 Pentapeptide repeat-like
2 2 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
2 2 1 1 SCOP 50494 Trypsin-like serine proteases
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 54523 Pili subunits
2 2 1 0 SCOP 50692 ADC-like
2 2 1 0 SCOP 55797 PR-1-like
2 2 1 1 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
2 2 2 0 SCOP 158682 TerB-like
2 2 1 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
2 2 2 0 SCOP 161111 Cation efflux protein transmembrane domain-like
2 2 1 0 SCOP 54913 GlnB-like
2 2 2 1 SCOP 69065 RNase III domain-like
2 2 1 1 SCOP 51391 Thiamin phosphate synthase
2 2 1 1 SCOP 144052 Thermophilic metalloprotease-like
2 2 2 1 SCOP 89028 Cobalamin adenosyltransferase-like
2 2 2 1 SCOP 55826 YbaK/ProRS associated domain
2 2 1 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
2 2 2 0 SCOP 55804 Phoshotransferase/anion transport protein
2 2 2 0 SCOP 48295 TrpR-like
2 2 2 1 SCOP 143631 ApbE-like
2 2 2 0 SCOP 50037 C-terminal domain of transcriptional repressors
2 2 2 0 SCOP 140683 SP0561-like
2 2 2 0 SCOP 75138 HprK N-terminal domain-like
2 2 2 0 SCOP 101473 DhaL-like
2 2 1 1 SCOP 51219 TRAP-like
2 2 2 1 SCOP 53041 Resolvase-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 2 1 SCOP 50939 Sialidases
2 2 1 0 SCOP 48695 Multiheme cytochromes
2 2 2 1 SCOP 75005 Arabinanase/levansucrase/invertase
2 2 2 0 SCOP 109709 KorB DNA-binding domain-like
2 2 2 0 SCOP 158791 MgtE N-terminal domain-like
2 1 1 0 SCOP 49401 Bacterial adhesins
2 2 2 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
2 2 1 0 SCOP 48008 GntR ligand-binding domain-like
2 2 1 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
2 2 1 0 SCOP 143865 CorA soluble domain-like
2 2 1 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 1 SCOP 51246 Rudiment single hybrid motif
2 2 2 0 SCOP 63520 PTS-regulatory domain, PRD
2 2 1 0 SCOP 54106 LysM domain
2 2 2 0 SCOP 55890 Sporulation response regulatory protein Spo0B
2 2 2 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
2 2 1 0 SCOP 52935 PK C-terminal domain-like
2 2 2 1 SCOP 52009 Phosphohistidine domain
2 2 2 0 SCOP 55658 L9 N-domain-like
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 1 1 0 SCOP 158499 DnaD domain-like
2 2 2 1 SCOP 56037 PheT/TilS domain
2 1 1 0 SCOP 158430 Bacillus cereus metalloprotein-like
2 2 2 1 SCOP 140990 FtsH protease domain-like
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 1 1 1 SCOP 89260 Collagen-binding domain
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 1 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 1 1 SCOP 52968 B12-dependent dehydatase associated subunit
2 2 2 1 SCOP 160148 CPE0013-like
2 2 1 0 SCOP 143548 Serine metabolism enzymes domain
2 2 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 55252 C-terminal domain of arginine repressor
2 2 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 2 0 SCOP 46934 UBA-like
2 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
2 2 1 2 SCOP 56327 LDH C-terminal domain-like
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 49299 PKD domain
2 2 1 1 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 52113 BRCT domain
2 2 2 0 SCOP 141259 CarD-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 0 SCOP 159283 Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
2 2 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
2 2 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 2 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 142433 CinA-like
1 1 1 1 SCOP 54197 HIT-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 0 SCOP 118010 TM1457-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 50129 GroES-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 89360 HesB-like domain
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 54292 2Fe-2S ferredoxin-like
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 64307 SirA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 48576 Terpenoid synthases
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 1 SCOP 143744 GlcG-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 54427 NTF2-like
1 1 1 1 SCOP 56322 ADC synthase
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 56317 Carbon-nitrogen hydrolase
1 1 1 1 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 51126 Pectin lyase-like
1 1 1 0 SCOP 51197 Clavaminate synthase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 1 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 0 SCOP 52058 L domain-like
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
1 1 1 1 SCOP 46458 Globin-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 1 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 142754 NadA-like
1 1 1 0 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 143100 TTHA1013/TTHA0281-like
1 1 1 0 SCOP 51230 Single hybrid motif
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 0 SCOP 143990 YbiA-like
1 1 1 0 SCOP 117782 YbjQ-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 1 SCOP 102215 Creatininase
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 47345 Colicin E immunity proteins
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 54786 YcfA/nrd intein domain
1 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 0 SCOP 49879 SMAD/FHA domain
1 1 1 1 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 0 SCOP 159133 EutN/CcmL-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 103084 Holliday junction resolvase RusA
1 1 1 0 SCOP 111369 HlyD-like secretion proteins
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 1 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 103088 OmpA-like
1 1 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 160537 SpoVG-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 50814 Lipocalins
1 1 1 1 SCOP 161070 SNF-like
1 1 1 1 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 52242 Cobalamin (vitamin B12)-binding domain
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 1 SCOP 142338 CofD-like
1 1 1 0 SCOP 110391 GlpP-like
1 1 1 1 SCOP 159774 YerB-like
1 1 1 0 SCOP 53146 Nitrogenase accessory factor-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 103007 Hypothetical protein TT1725
1 1 1 1 SCOP 110395 CutC-like
1 1 1 1 SCOP 56271 Pyruvoyl-dependent histidine and arginine decarboxylases
1 1 1 0 SCOP 82171 DPP6 N-terminal domain-like
1 1 1 0 SCOP 55136 Probable bacterial effector-binding domain
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 159672 CbiG N-terminal domain-like
1 1 1 1 SCOP 102546 RbsD-like
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 110455 Toprim domain
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 0 SCOP 101756 Hypothetical protein YgiW
1 1 1 0 SCOP 56563 Major capsid protein gp5
1 1 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 1 SCOP 142823 ComB-like
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 46973 Enzyme IIa from lactose specific PTS, IIa-lac
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 117281 Kelch motif
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 158221 YnzC-like
1 1 1 0 SCOP 103190 Sensory domain-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 111342 CbiD-like
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 49464 Carboxypeptidase regulatory domain-like
1 1 1 0 SCOP 90257 Myosin rod fragments
1 1 1 1 SCOP 56978 Perfringolysin
1 1 1 1 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 49842 TNF-like
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 47090 PGBD-like
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 47148 Diol dehydratase, gamma subunit
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 1 SCOP 109797 Bacteriocin immunity protein-like
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 160964 MalF N-terminal region-like
1 1 1 0 SCOP 110997 Sporulation related repeat
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 50151 SacY-like RNA-binding domain
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 53743 FucI/AraA N-terminal and middle domains
1 1 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 0 SCOP 89082 Antibiotic binding domain of TipA-like multidrug resistance regulators
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 1 SCOP 50443 FucI/AraA C-terminal domain-like
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82708 R3H domain
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 141072 CalX-like
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 1 SCOP 75553 Smc hinge domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 1 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 1 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 1 SCOP 143856 DeoB insert domain-like
1 1 1 1 SCOP 82317 Swiveling domain of dehydratase reactivase alpha subunit

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Pre-PUA domain
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily TSP-1 type 1 repeat
SCOP superfamily AlbA-like
SCOP superfamily N-utilization substance G protein NusG, insert domain
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Fumarate reductase respiratory complex transmembrane subunits
SCOP superfamily Voltage-gated potassium channels
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Monomethylamine methyltransferase MtmB
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Integrin alpha N-terminal domain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily SAP domain
SCOP superfamily BAG domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Tropomyosin
SCOP superfamily FYVE/PHD zinc finger
SCOP superfamily RING/U-box
SCOP superfamily Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SCOP superfamily Granulin repeat
SCOP superfamily Anthrax protective antigen
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
SCOP superfamily Methionine synthase activation domain-like
SCOP superfamily eIF4e-like
SCOP superfamily Copper amine oxidase, domain N
SCOP superfamily RuBisCO, small subunit
SCOP superfamily eEF-1beta-like
SCOP superfamily RNA-binding domain, RBD
SCOP superfamily Mitochondrial glycoprotein MAM33-like
SCOP superfamily Glutamine synthetase, N-terminal domain
SCOP superfamily Succinyl-CoA synthetase domains
SCOP superfamily Caspase-like
SCOP superfamily Barstar-related
SCOP superfamily alpha-D-mannose-specific plant lectins
SCOP superfamily Outer surface protein
SCOP superfamily Quinoprotein alcohol dehydrogenase-like
SCOP superfamily Galactose oxidase, central domain
SCOP superfamily STI-like
SCOP superfamily Viral protein domain
SCOP superfamily Transthyretin (synonym: prealbumin)
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Protein prenylyltransferase
SCOP superfamily ARM repeat
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily FliG
SCOP superfamily DEATH domain
SCOP superfamily t-snare proteins
SCOP superfamily Ribbon-helix-helix
SCOP superfamily EF-hand
SCOP superfamily Proteasome activator
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily Spectrin repeat
SCOP superfamily Prefoldin
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily YfgJ-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily AF1531-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily NMB0488-like
SCOP superfamily PH1570-like
SCOP superfamily YkvR-like
SCOP superfamily Sama2622-like
SCOP superfamily AF1862-like
SCOP superfamily TM1646-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Vanabin-like
SCOP superfamily ORC1-binding domain
SCOP superfamily STIV B116-like
SCOP superfamily Nqo1 middle domain-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily IpaD-like
SCOP superfamily TM0693-like
SCOP superfamily BAS1536-like
SCOP superfamily LemA-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily Endosomal sorting complex assembly domain
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Vacuolar ATP synthase subunit C
SCOP superfamily Nucleoporin domain
SCOP superfamily eIF2alpha middle domain-like
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily OmpH-like
SCOP superfamily Ammonium transporter
SCOP superfamily AF1104-like
SCOP superfamily Ligand-binding domain in the NO signalling and Golgi transport
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily BAR/IMD domain-like
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Preprotein translocase SecE subunit
SCOP superfamily Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
SCOP superfamily Virulence-associated V antigen
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Activator of Hsp90 ATPase, Aha1
SCOP superfamily JAB1/MPN domain
SCOP superfamily Formin homology 2 domain (FH2 domain)
SCOP superfamily HAND domain of the nucleosome remodeling ATPase ISWI

Jump to [ Top of page · Assignment statistics ]