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Encephalitozoon cuniculi superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Fungi; Microsporidia; Apansporoblastina; Unikaryonidae; Encephalitozoon; Encephalitozoon cuniculi; Encephalitozoon cuniculi GB-M1

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1996 total
1124 (56 %) with assignment
359 average length
43 % amino acid coverage
Domains: 1524 total
418 unique superfamilies
156 unique families
273 average length
3.6 average superfamily size
73 % formed by duplication
Domain combinations: 197 domain pairs
628 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

179 154 46 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
47 45 10 1 SCOP 50978 WD40 repeat-like
41 35 19 2 SCOP 50249 Nucleic acid-binding proteins
40 38 10 2 SCOP 48371 ARM repeat
38 38 8 2 SCOP 56112 Protein kinase-like (PK-like)
28 23 9 0 SCOP 54928 RNA-binding domain, RBD
26 21 9 0 SCOP 46689 Homeodomain-like
25 25 9 1 SCOP 57850 RING/U-box
23 22 14 0 SCOP 46785 "Winged helix" DNA-binding domain
19 19 4 0 SCOP 50182 Sm-like ribonucleoproteins
18 10 6 1 SCOP 53067 Actin-like ATPase domain
18 17 7 1 SCOP 48452 TPR-like
17 17 4 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
16 16 4 5 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
15 15 4 1 SCOP 47113 Histone-fold
14 14 10 3 SCOP 54211 Ribosomal protein S5 domain 2-like
14 11 6 0 SCOP 57667 beta-beta-alpha zinc fingers
13 10 5 1 SCOP 52833 Thioredoxin-like
13 13 6 1 SCOP 56784 HAD-like
13 12 9 1 SCOP 52374 Nucleotidylyl transferase
13 9 5 0 SCOP 47954 Cyclin-like
12 11 8 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
11 11 9 1 SCOP 55681 Class II aaRS and biotin synthetases
11 11 8 2 SCOP 50447 Translation proteins
11 11 8 0 SCOP 46565 Chaperone J-domain
9 8 6 3 SCOP 53098 Ribonuclease H-like
9 9 6 1 SCOP 54236 Ubiquitin-like
8 8 3 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
8 8 7 2 SCOP 51735 NAD(P)-binding Rossmann-fold domains
8 7 3 0 SCOP 103473 MFS general substrate transporter
8 8 3 1 SCOP 54495 UBC-like
8 8 2 0 SCOP 47473 EF-hand
8 7 7 0 SCOP 57783 Zinc beta-ribbon
8 8 1 0 SCOP 48592 GroEL equatorial domain-like
8 7 5 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
8 8 1 1 SCOP 52029 GroEL apical domain-like
8 6 5 0 SCOP 90229 CCCH zinc finger
8 8 1 0 SCOP 54849 GroEL-intermediate domain like
7 6 3 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
7 7 4 0 SCOP 55315 L30e-like
7 7 3 2 SCOP 54001 Cysteine proteinases
7 7 7 0 SCOP 52954 Class II aaRS ABD-related
7 4 3 0 SCOP 81901 HCP-like
7 7 3 1 SCOP 50729 PH domain-like
7 4 4 0 SCOP 52113 BRCT domain
7 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
7 4 2 0 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
6 6 2 0 SCOP 57829 Zn-binding ribosomal proteins
6 6 3 1 SCOP 50104 Translation proteins SH3-like domain
6 6 3 1 SCOP 56300 Metallo-dependent phosphatases
6 6 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
6 6 2 0 SCOP 64356 SNARE-like
6 6 4 1 SCOP 88723 PIN domain-like
6 5 2 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
6 6 1 0 SCOP 90123 ABC transporter transmembrane region
6 6 6 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
5 5 2 0 SCOP 53474 alpha/beta-Hydrolases
5 5 4 1 SCOP 51905 FAD/NAD(P)-binding domain
5 5 4 1 SCOP 55120 Pseudouridine synthase
5 5 2 2 SCOP 53383 PLP-dependent transferases
5 5 3 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
5 5 4 0 SCOP 52058 L domain-like
5 5 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
5 3 3 0 SCOP 54160 Chromo domain-like
5 4 4 1 SCOP 47370 Bromodomain
5 5 4 0 SCOP 75553 Smc hinge domain
4 4 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 2 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
4 3 3 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
4 3 2 0 SCOP 81333 F1F0 ATP synthase subunit C
4 4 3 0 SCOP 58038 SNARE fusion complex
4 4 3 1 SCOP 56672 DNA/RNA polymerases
4 4 3 0 SCOP 49785 Galactose-binding domain-like
4 4 2 0 SCOP 52047 RNI-like
4 4 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
4 4 4 1 SCOP 47576 Calponin-homology domain, CH-domain
4 4 4 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
4 4 4 1 SCOP 53300 vWA-like
4 2 2 0 SCOP 51206 cAMP-binding domain-like
4 4 3 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
4 1 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
4 2 1 1 SCOP 53901 Thiolase-like
4 4 2 0 SCOP 50370 Ricin B-like lectins
4 3 3 0 SCOP 54980 EF-G C-terminal domain-like
4 4 1 0 SCOP 81665 Calcium ATPase, transmembrane domain M
4 4 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
4 4 3 0 SCOP 48350 GTPase activation domain, GAP
4 4 3 0 SCOP 158573 GINS helical bundle-like
4 4 1 0 SCOP 81653 Calcium ATPase, transduction domain A
3 3 2 0 SCOP 54197 HIT-like
3 3 3 1 SCOP 53137 Translational machinery components
3 3 3 1 SCOP 55920 Creatinase/aminopeptidase
3 3 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
3 3 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
3 3 1 0 SCOP 53597 Dihydrofolate reductase-like
3 3 3 0 SCOP 52980 Restriction endonuclease-like
3 3 3 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
3 3 2 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
3 3 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
3 2 2 0 SCOP 47095 HMG-box
3 3 3 1 SCOP 56801 Acetyl-CoA synthetase-like
3 3 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
3 3 2 0 SCOP 47819 HRDC-like
3 2 2 0 SCOP 46955 Putative DNA-binding domain
3 3 3 1 SCOP 81301 Nucleotidyltransferase
3 3 2 0 SCOP 56219 DNase I-like
3 3 3 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
3 3 3 0 SCOP 88697 PUA domain-like
3 3 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
3 2 2 0 SCOP 56024 Phospholipase D/nuclease
3 3 3 1 SCOP 89124 Nop domain
3 3 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
3 3 1 0 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 3 0 SCOP 81995 beta-sandwich domain of Sec23/24
3 3 3 0 SCOP 57903 FYVE/PHD zinc finger
3 3 1 1 SCOP 55307 Tubulin C-terminal domain-like
3 3 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
3 3 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
3 3 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
3 3 2 0 SCOP 46934 UBA-like
3 2 2 1 SCOP 55945 TATA-box binding protein-like
3 3 3 0 SCOP 158702 Sec63 N-terminal domain-like
3 3 2 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
3 3 1 1 SCOP 81271 TGS-like
3 3 3 0 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 2 2 0 SCOP 57756 Retrovirus zinc finger-like domains
3 3 3 0 SCOP 75632 Cullin homology domain
3 1 1 0 SCOP 47762 PAH2 domain
3 3 3 0 SCOP 81811 Helical domain of Sec23/24
3 3 3 0 SCOP 82919 Zn-finger domain of Sec23/24
2 2 1 1 SCOP 52317 Class I glutamine amidotransferase-like
2 2 2 0 SCOP 53927 Cytidine deaminase-like
2 2 2 2 SCOP 53697 SIS domain
2 2 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
2 1 1 1 SCOP 53784 Phosphofructokinase
2 2 1 1 SCOP 47240 Ferritin-like
2 2 2 0 SCOP 100950 NagB/RpiA/CoA transferase-like
2 2 2 0 SCOP 55174 Alpha-L RNA-binding motif
2 2 1 0 SCOP 51283 dUTPase-like
2 2 2 0 SCOP 48150 DNA-glycosylase
2 2 1 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 1 0 SCOP 50715 Ribosomal protein L25-like
2 2 2 0 SCOP 55811 Nudix
2 1 1 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
2 2 2 0 SCOP 101908 Putative isomerase YbhE
2 2 1 1 SCOP 51395 FMN-linked oxidoreductases
2 2 1 0 SCOP 49764 HSP20-like chaperones
2 2 2 0 SCOP 109604 HD-domain/PDEase-like
2 2 1 1 SCOP 50891 Cyclophilin-like
2 2 2 1 SCOP 53649 Alkaline phosphatase-like
2 2 2 0 SCOP 48403 Ankyrin repeat
2 2 2 0 SCOP 49899 Concanavalin A-like lectins/glucanases
2 2 1 0 SCOP 52972 ITPase-like
2 2 2 0 SCOP 161219 CHY zinc finger-like
2 2 1 0 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
2 2 1 0 SCOP 143113 NAP-like
2 2 1 0 SCOP 55418 eIF4e-like
2 2 2 1 SCOP 52768 Arginase/deacetylase
2 2 2 0 SCOP 55073 Nucleotide cyclase
2 2 1 0 SCOP 89550 PHP domain-like
2 2 1 1 SCOP 52467 DHS-like NAD/FAD-binding domain
2 2 2 0 SCOP 69322 Tricorn protease domain 2
2 2 1 1 SCOP 50486 FMT C-terminal domain-like
2 2 2 0 SCOP 47781 RuvA domain 2-like
2 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
2 2 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 2 2 1 SCOP 52743 Subtilisin-like
2 1 1 0 SCOP 55979 DNA clamp
2 2 2 0 SCOP 47661 t-snare proteins
2 2 2 0 SCOP 52922 TK C-terminal domain-like
2 2 1 0 SCOP 160059 PriA/YqbF domain
2 2 2 0 SCOP 48334 DNA repair protein MutS, domain III
2 1 1 0 SCOP 161093 MgtE membrane domain-like
2 2 2 1 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
2 2 2 0 SCOP 52075 Outer arm dynein light chain 1
2 2 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
2 2 2 0 SCOP 63380 Riboflavin synthase domain-like
2 2 2 1 SCOP 81631 PAP/OAS1 substrate-binding domain
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 2 1 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 2 2 0 SCOP 48065 DBL homology domain (DH-domain)
2 1 1 0 SCOP 56053 Ribosomal protein L6
2 2 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 74788 Cullin repeat-like
2 1 1 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
2 2 1 0 SCOP 82109 MIR domain
2 2 1 0 SCOP 101447 Formin homology 2 domain (FH2 domain)
2 2 1 1 SCOP 56204 Hect, E3 ligase catalytic domain
2 2 2 0 SCOP 57889 Cysteine-rich domain
2 2 1 0 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
2 2 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 1 0 SCOP 144074 E2F-DP heterodimerization region
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 0 SCOP 51045 WW domain
2 2 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
2 2 2 0 SCOP 50916 Rap30/74 interaction domains
2 2 2 0 SCOP 54585 Cdc48 domain 2-like
2 2 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 51556 Metallo-dependent hydrolases
1 1 1 1 SCOP 51569 Aldolase
1 1 1 0 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 53613 Ribokinase-like
1 1 1 0 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 51366 Ribulose-phoshate binding barrel
1 1 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 0 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 103657 BAR/IMD domain-like
1 1 1 0 SCOP 52218 Flavoproteins
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 0 SCOP 75217 alpha/beta knot
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 0 SCOP 54862 4Fe-4S ferredoxins
1 1 1 0 SCOP 54292 2Fe-2S ferredoxin-like
1 1 1 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 102114 Radical SAM enzymes
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 53254 Phosphoglycerate mutase-like
1 1 1 0 SCOP 55205 EPT/RTPC-like
1 1 1 0 SCOP 48576 Terpenoid synthases
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 1 SCOP 53187 Zn-dependent exopeptidases
1 1 1 0 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 50985 RCC1/BLIP-II
1 1 1 0 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 81296 E set domains
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 0 SCOP 55753 Actin depolymerizing proteins
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
1 1 1 0 SCOP 54648 DLC
1 1 1 0 SCOP 54534 FKBP-like
1 1 1 0 SCOP 54427 NTF2-like
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 54897 Protease propeptides/inhibitors
1 1 1 0 SCOP 51306 LexA/Signal peptidase
1 1 1 0 SCOP 51182 RmlC-like cupins
1 1 1 0 SCOP 48439 Protein prenylyltransferase
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 1 SCOP 48208 Six-hairpin glycosidases
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
1 1 1 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
1 1 1 0 SCOP 55159 eIF1-like
1 1 1 1 SCOP 55961 Bet v1-like
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 52151 FabD/lysophospholipase-like
1 1 1 0 SCOP 64268 PX domain
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 101546 ASF1-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 52172 CheY-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 50692 ADC-like
1 1 1 0 SCOP 55797 PR-1-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 53955 Lysozyme-like
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 49879 SMAD/FHA domain
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 1 SCOP 54518 Tubby C-terminal domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
1 1 1 0 SCOP 82199 SET domain
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 47592 SWIB/MDM2 domain
1 1 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 102462 Peptidyl-tRNA hydrolase II
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 50156 PDZ domain-like
1 1 1 0 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 101898 NHL repeat
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 0 SCOP 117281 Kelch motif
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 56719 Type II DNA topoisomerase
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 110019 ERO1-like
1 1 1 0 SCOP 81383 F-box domain
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68906 SAP domain
1 1 1 0 SCOP 53920 Fe-only hydrogenase
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 90209 Ran binding protein zinc finger-like
1 1 1 0 SCOP 49354 PapD-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 48366 Ras GEF
1 1 1 0 SCOP 118310 AN1-like Zinc finger
1 1 1 0 SCOP 55550 SH2 domain
1 1 1 0 SCOP 74924 Cap-Gly domain
1 1 1 0 SCOP 49348 Clathrin adaptor appendage domain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 57845 B-box zinc-binding domain
1 1 1 1 SCOP 48445 14-3-3 protein
1 1 1 1 SCOP 69000 FAD-dependent thiol oxidase
1 1 1 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
1 1 1 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
1 1 1 0 SCOP 47769 SAM/Pointed domain
1 1 1 0 SCOP 48464 ENTH/VHS domain
1 1 1 0 SCOP 55455 SRF-like
1 1 1 0 SCOP 109993 VPS9 domain
1 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 48425 Sec7 domain
1 1 1 0 SCOP 57959 Leucine zipper domain
1 1 1 0 SCOP 46585 HR1 repeat
1 1 1 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 0 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 143885 RGC domain-like
1 1 1 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 0 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 46942 Elongation factor TFIIS domain 2
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 159042 Plus3-like
1 1 1 0 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 82615 Polo-box domain
1 1 1 0 SCOP 161245 Zinc hairpin stack
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 1 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Multidrug efflux transporter AcrB transmembrane domain
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
SCOP superfamily DPP6 N-terminal domain-like
SCOP superfamily FF domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily YhbY-like
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily LCCL domain
SCOP superfamily Tricorn protease N-terminal domain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily Calcium-dependent phosphotriesterase
SCOP superfamily Bacterial hemolysins
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Tropomyosin
SCOP superfamily Rubredoxin-like
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily Colicin
SCOP superfamily ADP-ribosylation
SCOP superfamily PheT/TilS domain
SCOP superfamily Subdomain of clathrin and coatomer appendage domain
SCOP superfamily GYF domain
SCOP superfamily Ribosome recycling factor, RRF
SCOP superfamily POZ domain
SCOP superfamily FMN-binding split barrel
SCOP superfamily GroES-like
SCOP superfamily Diphtheria toxin, C-terminal domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily Tetraspanin
SCOP superfamily Fungal elicitin
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily ERP29 C domain-like
SCOP superfamily Annexin
SCOP superfamily DNA polymerase beta, N-terminal domain-like
SCOP superfamily 4-helical cytokines
SCOP superfamily PGBD-like
SCOP superfamily Kix domain of CBP (creb binding protein)
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily Spectrin repeat
SCOP superfamily Double-stranded DNA-binding domain
SCOP superfamily CRAL/TRIO N-terminal domain
SCOP superfamily DNA helicase RuvA subunit, C-terminal domain
SCOP superfamily Prefoldin
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily YfgJ-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily PG1857-like
SCOP superfamily Cation efflux protein cytoplasmic domain-like
SCOP superfamily BH3980-like
SCOP superfamily TM1646-like
SCOP superfamily HIT/MYND zinc finger-like
SCOP superfamily Oxysterol-binding protein-like
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily CorA soluble domain-like
SCOP superfamily Kinetochore globular domain
SCOP superfamily At5g01610-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily Mediator hinge subcomplex-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily BAS1536-like
SCOP superfamily Synuclein
SCOP superfamily Band 7/SPFH domain
SCOP superfamily YfbU-like
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily YggX-like
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily Mitochondrial carrier
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Activator of Hsp90 ATPase, Aha1
SCOP superfamily Folate-binding domain
SCOP superfamily NSFL1 (p97 ATPase) cofactor p47, SEP domain
SCOP superfamily Colicin D/E5 nuclease domain
SCOP superfamily AXH domain
SCOP superfamily Heat shock protein 70kD (HSP70), C-terminal subdomain

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