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Pyrobaculum sp. 1860 superfamily assignments

Taxonomy
Taxonomy browser entry

Archaea; TACK group; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum ferrireducens

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 2824 total
1552 (55 %) with assignment
260 average length
55 % amino acid coverage
Domains: 1988 total
498 unique superfamilies
272 unique families
260 average length
4 average superfamily size
75 % formed by duplication
Domain combinations: 236 domain pairs
681 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

202 189 34 6 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
66 66 13 2 SCOP 46785 "Winged helix" DNA-binding domain
54 54 18 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
37 37 7 5 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
33 32 9 1 SCOP 54862 4Fe-4S ferredoxins
30 26 10 2 SCOP 51905 FAD/NAD(P)-binding domain
27 23 4 1 SCOP 161098 MetI-like
26 26 5 0 SCOP 102114 Radical SAM enzymes
25 23 10 1 SCOP 53850 Periplasmic binding protein-like II
23 23 10 4 SCOP 50249 Nucleic acid-binding proteins
23 23 3 2 SCOP 88723 PIN domain-like
21 21 2 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
21 14 5 1 SCOP 54631 CBS-domain pair
20 17 6 5 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
20 20 3 0 SCOP 103473 MFS general substrate transporter
20 20 3 0 SCOP 52980 Restriction endonuclease-like
19 19 4 0 SCOP 53448 Nucleotide-diphospho-sugar transferases
17 17 7 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
17 17 2 0 SCOP 81301 Nucleotidyltransferase
16 15 10 5 SCOP 56059 Glutathione synthetase ATP-binding domain-like
16 15 5 1 SCOP 52833 Thioredoxin-like
16 16 2 3 SCOP 53383 PLP-dependent transferases
16 8 2 1 SCOP 53901 Thiolase-like
15 15 3 1 SCOP 56784 HAD-like
15 15 10 3 SCOP 52374 Nucleotidylyl transferase
15 15 3 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
14 14 10 2 SCOP 55681 Class II aaRS and biotin synthetases
13 12 9 3 SCOP 54211 Ribosomal protein S5 domain 2-like
13 13 5 5 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
13 12 8 1 SCOP 50692 ADC-like
13 13 2 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
12 12 5 0 SCOP 57997 Tropomyosin
12 7 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
11 11 5 2 SCOP 52317 Class I glutamine amidotransferase-like
11 9 4 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
10 10 4 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
9 9 5 3 SCOP 51569 Aldolase
9 9 5 1 SCOP 53271 PRTase-like
9 9 2 3 SCOP 51366 Ribulose-phoshate binding barrel
9 9 3 0 SCOP 56300 Metallo-dependent phosphatases
9 9 1 1 SCOP 55811 Nudix
9 9 3 1 SCOP 56801 Acetyl-CoA synthetase-like
9 9 8 2 SCOP 50447 Translation proteins
8 7 5 3 SCOP 100950 NagB/RpiA/CoA transferase-like
8 8 7 0 SCOP 88697 PUA domain-like
8 8 5 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
8 8 3 1 SCOP 52922 TK C-terminal domain-like
8 7 4 1 SCOP 52440 PreATP-grasp domain
8 8 1 1 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
7 7 5 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
7 7 5 2 SCOP 52096 ClpP/crotonase
7 7 1 0 SCOP 75169 DsrEFH-like
7 7 5 0 SCOP 57783 Zinc beta-ribbon
7 7 2 0 SCOP 50022 ISP domain
7 7 4 3 SCOP 52467 DHS-like NAD/FAD-binding domain
7 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 6 4 3 SCOP 50104 Translation proteins SH3-like domain
6 6 1 1 SCOP 50129 GroES-like
6 6 2 3 SCOP 53633 Carbamate kinase-like
6 6 2 1 SCOP 48150 DNA-glycosylase
6 6 1 0 SCOP 64307 SirA-like
6 6 3 1 SCOP 50182 Sm-like ribonucleoproteins
6 6 2 0 SCOP 47598 Ribbon-helix-helix
6 6 6 0 SCOP 47413 lambda repressor-like DNA-binding domains
6 6 3 0 SCOP 53822 Periplasmic binding protein-like I
6 6 2 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
6 6 3 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
6 6 5 0 SCOP 55021 ACT-like
6 6 2 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
6 5 3 0 SCOP 56042 PurM C-terminal domain-like
6 4 3 0 SCOP 47954 Cyclin-like
5 5 3 1 SCOP 51556 Metallo-dependent hydrolases
5 5 1 0 SCOP 57829 Zn-binding ribosomal proteins
5 5 3 1 SCOP 56112 Protein kinase-like (PK-like)
5 4 2 0 SCOP 54197 HIT-like
5 5 2 0 SCOP 89447 AbrB/MazE/MraZ-like
5 5 3 2 SCOP 53098 Ribonuclease H-like
5 5 3 0 SCOP 75217 alpha/beta knot
5 5 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 4 2 1 SCOP 51395 FMN-linked oxidoreductases
5 5 3 1 SCOP 53187 Zn-dependent exopeptidases
5 5 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
5 5 1 0 SCOP 50630 Acid proteases
5 5 1 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
5 5 5 1 SCOP 52954 Class II aaRS ABD-related
5 5 2 2 SCOP 51998 PFL-like glycyl radical enzymes
5 5 3 0 SCOP 54909 Dimeric alpha+beta barrel
5 5 5 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
5 5 1 0 SCOP 50331 MOP-like
5 5 5 1 SCOP 46548 alpha-helical ferredoxin
5 5 4 0 SCOP 143437 THUMP domain-like
5 5 3 1 SCOP 56176 FAD-binding/transporter-associated domain-like
5 5 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
5 5 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
5 4 2 1 SCOP 55326 PurM N-terminal domain-like
4 4 2 0 SCOP 53474 alpha/beta-Hydrolases
4 4 1 1 SCOP 53790 Tetrapyrrole methylase
4 4 2 2 SCOP 53613 Ribokinase-like
4 4 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 4 1 SCOP 53137 Translational machinery components
4 4 4 1 SCOP 55120 Pseudouridine synthase
4 4 2 0 SCOP 53067 Actin-like ATPase domain
4 4 2 0 SCOP 47240 Ferritin-like
4 4 3 0 SCOP 109755 PhoU-like
4 4 1 2 SCOP 48557 L-aspartase-like
4 4 3 0 SCOP 51161 Trimeric LpxA-like enzymes
4 4 1 2 SCOP 53720 ALDH-like
4 4 4 0 SCOP 54292 2Fe-2S ferredoxin-like
4 4 2 0 SCOP 54285 MoaD/ThiS
4 3 2 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 3 1 SCOP 55315 L30e-like
4 4 3 1 SCOP 51445 (Trans)glycosidases
4 4 2 2 SCOP 51182 RmlC-like cupins
4 4 3 0 SCOP 88713 Glycoside hydrolase/deacetylase
4 4 1 2 SCOP 52768 Arginase/deacetylase
4 4 2 0 SCOP 81342 Transmembrane di-heme cytochromes
4 4 3 1 SCOP 52016 LeuD/IlvD-like
4 4 2 0 SCOP 49503 Cupredoxins
4 4 3 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
4 4 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
4 3 3 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
4 2 1 0 SCOP 55979 DNA clamp
4 4 2 0 SCOP 51971 Nucleotide-binding domain
4 3 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 2 0 SCOP 141322 NfeD domain-like
4 4 2 0 SCOP 117892 Band 7/SPFH domain
4 4 1 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
4 3 2 0 SCOP 54585 Cdc48 domain 2-like
3 3 2 2 SCOP 53697 SIS domain
3 3 1 1 SCOP 55282 RL5-like
3 3 2 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 3 1 SCOP 55920 Creatinase/aminopeptidase
3 3 1 0 SCOP 64182 DHH phosphoesterases
3 3 2 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
3 3 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
3 2 2 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
3 3 2 0 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
3 2 2 2 SCOP 55205 EPT/RTPC-like
3 3 2 0 SCOP 49764 HSP20-like chaperones
3 3 3 0 SCOP 50475 FMN-binding split barrel
3 3 2 1 SCOP 109604 HD-domain/PDEase-like
3 3 2 1 SCOP 56672 DNA/RNA polymerases
3 3 3 1 SCOP 53639 AraD/HMP-PK domain-like
3 3 1 0 SCOP 69618 HemD-like
3 3 3 1 SCOP 81442 Cytochrome c oxidase subunit I-like
3 3 1 0 SCOP 101960 Stabilizer of iron transporter SufD
3 3 1 0 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 3 1 SCOP 50494 Trypsin-like serine proteases
3 3 2 0 SCOP 53807 "Helical backbone" metal receptor
3 3 1 0 SCOP 53300 vWA-like
3 3 2 0 SCOP 54975 Acylphosphatase/BLUF domain-like
3 3 1 0 SCOP 143430 TTP0101/SSO1404-like
3 3 1 0 SCOP 89155 TorD-like
3 3 2 0 SCOP 48695 Multiheme cytochromes
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 2 1 SCOP 52743 Subtilisin-like
3 3 3 0 SCOP 50156 PDZ domain-like
3 3 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 2 2 0 SCOP 54980 EF-G C-terminal domain-like
3 3 3 0 SCOP 52009 Phosphohistidine domain
3 3 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 1 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 3 2 1 SCOP 48310 Aldehyde ferredoxin oxidoreductase, C-terminal domains
3 3 3 1 SCOP 63882 MoeA N-terminal region -like
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 1 1 0 SCOP 53738 Phosphoglucomutase, first 3 domains
3 3 2 1 SCOP 56228 Aldehyde ferredoxin oxidoreductase, N-terminal domain
2 2 1 1 SCOP 53167 Purine and uridine phosphorylases
2 2 1 1 SCOP 53927 Cytidine deaminase-like
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
2 2 2 0 SCOP 46946 S13-like H2TH domain
2 2 1 0 SCOP 51658 Xylose isomerase-like
2 2 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
2 2 2 0 SCOP 55174 Alpha-L RNA-binding motif
2 2 2 2 SCOP 55821 YrdC/RibB
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 1 1 SCOP 56770 HydA/Nqo6-like
2 2 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
2 2 1 0 SCOP 56655 Carbohydrate phosphatase
2 2 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
2 2 1 0 SCOP 52121 Lumazine synthase
2 2 1 0 SCOP 48576 Terpenoid synthases
2 2 1 1 SCOP 56796 Dehydroquinate synthase-like
2 1 1 0 SCOP 48371 ARM repeat
2 2 2 0 SCOP 63829 Calcium-dependent phosphotriesterase
2 2 2 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 1 SCOP 48256 Citrate synthase
2 2 1 1 SCOP 48613 Heme oxygenase-like
2 2 1 0 SCOP 46579 Prefoldin
2 2 1 0 SCOP 53649 Alkaline phosphatase-like
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 1 0 SCOP 55144 LigT-like
2 2 1 0 SCOP 56317 Carbon-nitrogen hydrolase
2 2 1 0 SCOP 51306 LexA/Signal peptidase
2 2 1 1 SCOP 52972 ITPase-like
2 2 1 0 SCOP 51126 Pectin lyase-like
2 2 2 0 SCOP 48208 Six-hairpin glycosidases
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
2 2 1 1 SCOP 143447 AMMECR1-like
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 1 0 SCOP 144091 Rhomboid-like
2 1 1 0 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 2 0 SCOP 102405 MCP/YpsA-like
2 2 2 0 SCOP 55073 Nucleotide cyclase
2 1 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
2 1 1 0 SCOP 46955 Putative DNA-binding domain
2 2 1 0 SCOP 118196 YaeB-like
2 2 2 0 SCOP 75712 Rad50 coiled-coil Zn hook
2 2 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
2 2 1 1 SCOP 64167 SurE-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
2 2 2 1 SCOP 54913 GlnB-like
2 2 1 0 SCOP 102215 Creatininase
2 2 1 1 SCOP 56762 HydB/Nqo4-like
2 2 2 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 1 0 SCOP 49879 SMAD/FHA domain
2 2 1 0 SCOP 117396 TM1631-like
2 2 1 1 SCOP 53213 LigB-like
2 2 2 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
2 2 1 0 SCOP 89028 Cobalamin adenosyltransferase-like
2 2 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
2 2 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
2 1 1 0 SCOP 63411 LuxS/MPP-like metallohydrolase
2 2 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
2 2 1 0 SCOP 159659 Cgl1923-like
2 2 2 0 SCOP 53146 Nitrogenase accessory factor-like
2 2 1 2 SCOP 51604 Enolase C-terminal domain-like
2 1 1 0 SCOP 56024 Phospholipase D/nuclease
2 2 1 0 SCOP 82171 DPP6 N-terminal domain-like
2 2 2 0 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 0 SCOP 63867 MoeA C-terminal domain-like
2 2 1 1 SCOP 56003 Molybdenum cofactor-binding domain
2 2 1 0 SCOP 90123 ABC transporter transmembrane region
2 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 1 1 SCOP 48592 GroEL equatorial domain-like
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 2 0 SCOP 51246 Rudiment single hybrid motif
2 2 2 0 SCOP 49344 CBD9-like
2 2 1 0 SCOP 158568 AF1862-like
2 2 2 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
2 2 1 0 SCOP 48019 post-AAA+ oligomerization domain-like
2 2 1 0 SCOP 160387 NosL/MerB-like
2 2 2 0 SCOP 56037 PheT/TilS domain
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 0 SCOP 54826 Enolase N-terminal domain-like
2 2 1 1 SCOP 52029 GroEL apical domain-like
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 1 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 2 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 2 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
2 2 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
2 1 1 1 SCOP 55945 TATA-box binding protein-like
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 1 1 0 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 47741 CO dehydrogenase ISP C-domain like
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 2 1 0 SCOP 53743 FucI/AraA N-terminal and middle domains
2 2 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
2 2 2 0 SCOP 81271 TGS-like
2 2 2 1 SCOP 55261 GAD domain-like
2 2 2 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
2 2 1 1 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 0 SCOP 54849 GroEL-intermediate domain like
2 2 2 0 SCOP 88802 Pre-PUA domain
2 2 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 0 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 103657 BAR/IMD domain-like
1 1 1 1 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 51730 FAD-linked oxidoreductase
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 0 SCOP 48452 TPR-like
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 53254 Phosphoglycerate mutase-like
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 0 SCOP 46689 Homeodomain-like
1 1 1 1 SCOP 69721 DsrC, the gamma subunit of dissimilatory sulfite reductase
1 1 1 0 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 1 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 1 SCOP 52042 Ribosomal protein L32e
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 47473 EF-hand
1 1 1 0 SCOP 143744 GlcG-like
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 0 SCOP 51726 UROD/MetE-like
1 1 1 1 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 54534 FKBP-like
1 1 1 0 SCOP 46626 Cytochrome c
1 1 1 1 SCOP 56322 ADC synthase
1 1 1 0 SCOP 54001 Cysteine proteinases
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 55248 PCD-like
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 74650 Galactose mutarotase-like
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 1 SCOP 56529 FAH
1 1 1 0 SCOP 55159 eIF1-like
1 1 1 0 SCOP 55008 HMA, heavy metal-associated domain
1 1 1 0 SCOP 55961 Bet v1-like
1 1 1 1 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 1 SCOP 103378 2-methylcitrate dehydratase PrpD
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 141734 HisI-like
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 46458 Globin-like
1 1 1 1 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 144020 FdhE-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 51230 Single hybrid motif
1 1 1 0 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 103256 Hypothetical protein TM0160
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 0 SCOP 55797 PR-1-like
1 1 1 0 SCOP 117782 YbjQ-like
1 1 1 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 110087 DR1885-like metal-binding protein
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
1 1 1 1 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 159234 FomD-like
1 1 1 0 SCOP 69322 Tricorn protease domain 2
1 1 1 1 SCOP 117457 FumA C-terminal domain-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 53041 Resolvase-like
1 1 1 1 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 0 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
1 1 1 1 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 49452 Starch-binding domain-like
1 1 1 0 SCOP 75005 Arabinanase/levansucrase/invertase
1 1 1 0 SCOP 55136 Probable bacterial effector-binding domain
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 102198 Putative cyclase
1 1 1 0 SCOP 82704 AlbA-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 74784 Translin
1 1 1 1 SCOP 56574 Serpins
1 1 1 1 SCOP 89124 Nop domain
1 1 1 0 SCOP 111321 AF1104-like
1 1 1 0 SCOP 142535 AF0625-like
1 1 1 1 SCOP 111249 Sulfolobus fructose-1,6-bisphosphatase-like
1 1 1 1 SCOP 160975 AF1531-like
1 1 1 0 SCOP 54984 eEF-1beta-like
1 1 1 0 SCOP 57667 beta-beta-alpha zinc fingers
1 1 1 0 SCOP 160980 SSO1389-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
1 1 1 0 SCOP 158372 AF1782-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 160363 MTH889-like
1 1 1 1 SCOP 103165 Ta1353-like
1 1 1 1 SCOP 52777 CoA-dependent acyltransferases
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 101898 NHL repeat
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 1 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 48537 Phospholipase C/P1 nuclease
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 57903 FYVE/PHD zinc finger
1 1 1 0 SCOP 48076 LigA subunit of an aromatic-ring-opening dioxygenase LigAB
1 1 1 0 SCOP 81665 Calcium ATPase, transmembrane domain M
1 1 1 0 SCOP 116726 TrkA C-terminal domain-like
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 51011 Glycosyl hydrolase domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 143968 UbiD C-terminal domain-like
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 0 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 160964 MalF N-terminal region-like
1 1 1 0 SCOP 81631 PAP/OAS1 substrate-binding domain
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
1 1 1 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
1 1 1 0 SCOP 54768 dsRNA-binding domain-like
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 1 SCOP 158702 Sec63 N-terminal domain-like
1 1 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 101852 Bacterial fluorinating enzyme, C-terminal domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 102522 Bacterial fluorinating enzyme, N-terminal domain
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 81653 Calcium ATPase, transduction domain A
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 1 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 141300 GatD N-terminal domain-like
1 1 1 0 SCOP 140914 PriB N-terminal domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 55267 tRNA-intron endonuclease N-terminal domain-like
1 1 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Ran binding protein zinc finger-like
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily GIY-YIG endonuclease
SCOP superfamily N-utilization substance G protein NusG, insert domain
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily Double Clp-N motif
SCOP superfamily HCP-like
SCOP superfamily Poly A polymerase C-terminal region-like
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Bacterial ba3 type cytochrome c oxidase subunit IIa
SCOP superfamily Aquaporin-like
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily YhbC-like, N-terminal domain
SCOP superfamily Plakin repeat
SCOP superfamily Cullin repeat-like
SCOP superfamily Aconitase B, N-terminal domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily AhpD-like
SCOP superfamily Chorismate lyase-like
SCOP superfamily PX domain
SCOP superfamily YWTD domain
SCOP superfamily LEM domain
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Bacterial hemolysins
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Leucine zipper domain
SCOP superfamily ArfGap/RecO-like zinc finger
SCOP superfamily RING/U-box
SCOP superfamily Rubredoxin-like
SCOP superfamily Snake toxin-like
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily PYP-like sensor domain (PAS domain)
SCOP superfamily Bactericidal permeability-increasing protein, BPI
SCOP superfamily Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP superfamily Alpha-lytic protease prodomain
SCOP superfamily Ribosomal L11/L12e N-terminal domain
SCOP superfamily Pyrimidine nucleoside phosphorylase C-terminal domain
SCOP superfamily Pili subunits
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Chelatase
SCOP superfamily HybD-like
SCOP superfamily N-(deoxy)ribosyltransferase-like
SCOP superfamily CheY-like
SCOP superfamily PA domain
SCOP superfamily Inosine monophosphate dehydrogenase (IMPDH)
SCOP superfamily cAMP-binding domain-like
SCOP superfamily Hemopexin-like domain
SCOP superfamily CheW-like
SCOP superfamily Osmotin, thaumatin-like protein
SCOP superfamily Calpain large subunit, middle domain (domain III)
SCOP superfamily Carboxypeptidase regulatory domain-like
SCOP superfamily Clathrin adaptor appendage domain
SCOP superfamily Acid phosphatase/Vanadium-dependent haloperoxidase
SCOP superfamily Terpenoid cyclases/Protein prenyltransferases
SCOP superfamily Regulator of G-protein signaling, RGS
SCOP superfamily FliG
SCOP superfamily DEATH domain
SCOP superfamily ERP29 C domain-like
SCOP superfamily Saposin
SCOP superfamily Homodimeric domain of signal transducing histidine kinase
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily PGBD-like
SCOP superfamily Ribosomal protein S20
SCOP superfamily Spectrin repeat
SCOP superfamily ARID-like
SCOP superfamily DNA polymerase III theta subunit-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily Rnp2-like
SCOP superfamily YdhG-like
SCOP superfamily CobE/GbiG C-terminal domain-like
SCOP superfamily TrmB C-terminal domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily LanC-like
SCOP superfamily NOB1 zinc finger-like
SCOP superfamily ApbE-like
SCOP superfamily PUG domain-like
SCOP superfamily DOPA-like
SCOP superfamily Topoisomerase V catalytic domain-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily Kelch motif
SCOP superfamily MIT domain
SCOP superfamily NADH pyrophosphatase intervening domain
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Recombination protein RecR
SCOP superfamily Sporulation related repeat
SCOP superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily I/LWEQ domain
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily Preprotein translocase SecE subunit
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily Heat shock protein 70kD (HSP70), C-terminal subdomain
SCOP superfamily Plant proteinase inhibitors
SCOP superfamily Kazal-type serine protease inhibitors

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