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Rickettsia parkeri str. Portsmouth family assignments

Taxonomy
Taxonomy browser entry

Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia parkeri; Rickettsia parkeri str. Portsmouth

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1318 total
743 (56 %) with assignment
249 average length
60 % amino acid coverage
Domains: 1063 total
452 unique superfamilies
226 unique families
267 average length
2.4 average superfamily size
57 % formed by duplication
Domain combinations: 209 domain pairs
491 unique architectures

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Family assignments

Domains

Proteins

SCOP link

Families

10 10 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
9 9 SCOP 52686 ABC transporter ATPase domain-like
9 8 SCOP 81269 Extended AAA-ATPase domain
8 6 SCOP 81268 Tandem AAA-ATPase domain
7 7 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
6 6 SCOP 52592 G proteins
5 5 SCOP 52670 RecA protein-like (ATPase-domain)
5 3 SCOP 53068 Actin/HSP70
4 2 SCOP 53902 Thiolase-related
3 3 SCOP 50282 Cold shock DNA-binding domain-like
3 3 SCOP 50448 Elongation factors
3 3 SCOP 51751 Tyrosine-dependent oxidoreductases
3 3 SCOP 52541 Nucleotide and nucleoside kinases
3 3 SCOP 52652 Nitrogenase iron protein-like
3 1 SCOP 53739 Phosphoglucomutase, first 3 domains
3 2 SCOP 54229 Ribonuclease PH domain 1-like
3 3 SCOP 55879 DNA gyrase/MutL, N-terminal domain
2 2 SCOP 47918 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 SCOP 50678 ValRS/IleRS/LeuRS editing domain
2 2 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
2 2 SCOP 52211 Succinyl-CoA synthetase domains
2 2 SCOP 52778 CAT-like
2 2 SCOP 52901 Glutathione peroxidase-like
2 2 SCOP 53099 Ribonuclease H
2 2 SCOP 53138 Ribosomal protein L18 and S11
2 2 SCOP 53402 Cystathionine synthase-like
2 2 SCOP 53417 GABA-aminotransferase-like
2 2 SCOP 54212 Translational machinery components
2 1 SCOP 54981 EF-G/eEF-2 domains III and V
2 2 SCOP 55425 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 SCOP 55921 Creatinase/aminopeptidase
2 2 SCOP 56220 DNase I-like
2 2 SCOP 56421 Peptide deformylase
2 2 SCOP 56720 Type II DNA topoisomerase
2 2 SCOP 75459 Pseudouridine synthase RsuA/RluD
2 2 SCOP 75621 Release factor
2 1 SCOP 82867 Multidrug efflux transporter AcrB transmembrane domain
2 1 SCOP 89572 Biotin dependent carboxylase carboxyltransferase domain
2 2 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 SCOP 142721 PyrH-like
1 1 SCOP 46549 Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
1 1 SCOP 46610 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 SCOP 46676 Cytochrome bc1 domain
1 1 SCOP 46947 Ribosomal protein S13
1 1 SCOP 47064 Ribosomal protein S15
1 1 SCOP 47253 Ribonucleotide reductase-like
1 1 SCOP 47447 Signal peptide-binding domain
1 1 SCOP 47790 C-terminal domain of RNA polymerase alpha subunit
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48151 Endonuclease III
1 1 SCOP 48257 Citrate synthase
1 1 SCOP 48335 DNA repair protein MutS, domain III
1 1 SCOP 48558 L-aspartase/fumarase
1 1 SCOP 48577 Isoprenyl diphosphate synthases
1 1 SCOP 49541 Periplasmic domain of cytochrome c oxidase subunit II
1 1 SCOP 50023 Rieske iron-sulfur protein (ISP)
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50263 Single strand DNA-binding domain, SSB
1 1 SCOP 50325 Inorganic pyrophosphatase
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50495 Prokaryotic proteases
1 1 SCOP 51162 UDP N-acetylglucosamine acyltransferase
1 1 SCOP 51165 Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD
1 1 SCOP 51284 dUTPase-like
1 1 SCOP 51396 FMN-linked oxidoreductases
1 1 SCOP 51553 NagZ-like
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51594 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
1 1 SCOP 51599 Class I DAHP synthetase
1 1 SCOP 51629 Pyruvate phosphate dikinase, C-terminal domain
1 1 SCOP 51714 tRNA-guanine transglycosylase
1 1 SCOP 51727 Uroporphyrinogen decarboxylase, UROD
1 1 SCOP 51830 Formate/glycerate dehydrogenases, NAD-domain
1 1 SCOP 51848 LDH N-terminal domain-like
1 1 SCOP 51900 CoA-binding domain
1 1 SCOP 51934 Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
1 1 SCOP 51943 FAD/NAD-linked reductases, N-terminal and central domains
1 1 SCOP 51985 MurCD N-terminal domain
1 1 SCOP 52002 R1 subunit of ribonucleotide reductase, C-terminal domain
1 1 SCOP 52017 LeuD-like
1 1 SCOP 52097 Clp protease, ClpP subunit
1 1 SCOP 52147 Mug-like
1 1 SCOP 52152 FabD-like
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52173 CheY-related
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52318 Class I glutamine amidotransferases (GAT)
1 1 SCOP 52441 BC N-terminal domain-like
1 1 SCOP 52484 Transhydrogenase domain III (dIII)
1 1 SCOP 52491 Tubulin, GTPase domain
1 1 SCOP 52508 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 SCOP 52926 Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
1 1 SCOP 52944 ATP synthase (F1-ATPase), gamma subunit
1 1 SCOP 52976 Maf-like
1 1 SCOP 53045 5' to 3' exonuclease catalytic domain
1 1 SCOP 53118 DnaQ-like 3'-5' exonuclease
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53201 Leucine aminopeptidase, C-terminal domain
1 1 SCOP 53204 Bacterial dinuclear zinc exopeptidases
1 1 SCOP 53240 Malic enzyme N-domain
1 1 SCOP 53245 MurCDEF C-terminal domain
1 1 SCOP 53329 Formyltransferase
1 1 SCOP 53339 RNA methyltransferase FtsJ
1 1 SCOP 53384 AAT-like
1 1 SCOP 53496 Prolyl oligopeptidase, C-terminal domain
1 1 SCOP 53624 MurCDEF
1 1 SCOP 53629 Folylpolyglutamate synthetase
1 1 SCOP 53660 Dimeric isocitrate & isopropylmalate dehydrogenases
1 1 SCOP 53687 Tryptophan synthase beta subunit-like PLP-dependent enzymes
1 1 SCOP 53733 Aconitase iron-sulfur domain
1 1 SCOP 53760 Peptidoglycan biosynthesis glycosyltransferase MurG
1 1 SCOP 53763 UDP-N-acetylglucosamine 2-epimerase
1 1 SCOP 53801 Ferrochelatase
1 1 SCOP 53851 Phosphate binding protein-like
1 1 SCOP 53914 Chalcone synthase-like
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54571 Ribosomal protein S19
1 1 SCOP 54714 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 SCOP 54720 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 SCOP 54822 Ribosomal protein S3 C-terminal domain
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 55000 Ribosomal protein S10
1 1 SCOP 55121 Pseudouridine synthase I TruA
1 1 SCOP 55178 Ribosomal protein S4
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55209 Enolpyruvate transferase, EPT
1 1 SCOP 55272 DNA repair protein MutS, domain I
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55308 Tubulin, C-terminal domain
1 1 SCOP 55348 GAPDH-like
1 1 SCOP 55505 Neurolysin-like
1 1 SCOP 55621 GTP cyclohydrolase I
1 1 SCOP 55667 Ribonuclease PH domain 2-like
1 1 SCOP 55812 MutT-like
1 1 SCOP 55847 N-acetylmuramoyl-L-alanine amidase-like
1 1 SCOP 55875 Heat shock protein 90, HSP90, N-terminal domain
1 1 SCOP 56038 B3/B4 domain of PheRS, PheT
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56067 BC ATP-binding domain-like
1 1 SCOP 56081 Succinyl-CoA synthetase, beta-chain, N-terminal domain
1 1 SCOP 56085 Pyruvate phosphate dikinase, N-terminal domain
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56251 Proteasome subunits
1 1 SCOP 56328 Lactate & malate dehydrogenases, C-terminal domain
1 1 SCOP 56350 Lambda integrase-like, catalytic core
1 1 SCOP 56426 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 SCOP 56602 beta-Lactamase/D-ala carboxypeptidase
1 1 SCOP 56673 DNA polymerase I
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56732 DNA primase DnaG catalytic core
1 1 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 SCOP 56802 Acetyl-CoA synthetase-like
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 63412 MPP-like
1 1 SCOP 64006 Undecaprenyl diphosphate synthase
1 1 SCOP 64264 Prokaryotic ribosomal protein L17
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 68901 Cytidylytransferase
1 1 SCOP 69066 RNase III catalytic domain-like
1 1 SCOP 69706 Transcription factor NusA, N-terminal domain
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 69797 Thymidylate synthase-complementing protein Thy1
1 1 SCOP 74656 CoA transferase alpha subunit-like
1 1 SCOP 74657 CoA transferase beta subunit-like
1 1 SCOP 74732 Ribosomal protein L20
1 1 SCOP 74983 Small protein B (SmpB)
1 1 SCOP 75218 SpoU-like RNA 2'-O ribose methyltransferase
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 75323 Exonuclease RecJ
1 1 SCOP 75626 YebC-like
1 1 SCOP 81441 Cytochrome c oxidase subunit I-like
1 1 SCOP 81451 Cytochrome c oxidase subunit III-like
1 1 SCOP 81642 Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 SCOP 81647 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 SCOP 81695 Chromosomal replication initiation factor DnaA C-terminal domain IV
1 1 SCOP 81768 Pre-protein crosslinking domain of SecA
1 1 SCOP 81887 Helical scaffold and wing domains of SecA
1 1 SCOP 82052 Obg GTP-binding protein N-terminal domain
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 82583 G domain-linked domain
1 1 SCOP 88741 Branched-chain alpha-keto acid dehydrogenase Pyr module
1 1 SCOP 88766 Branched-chain alpha-keto acid dehydrogenase PP module
1 1 SCOP 88784 rRNA adenine dimethylase-like
1 1 SCOP 88947 Sigma2 domain of RNA polymerase sigma factors
1 1 SCOP 89624 Ribose/Galactose isomerase RpiB/AlsB
1 1 SCOP 89629 tRNA(m1G37)-methyltransferase TrmD
1 1 SCOP 89800 Deoxycytidylate deaminase-like
1 1 SCOP 90124 ABC transporter transmembrane region
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101905 GyrA/ParC C-terminal domain-like
1 1 SCOP 102663 Phosphotransacetylase
1 1 SCOP 102755 Hsp90 middle domain
1 1 SCOP 102769 ATP-dependent protease Lon (La), catalytic domain
1 1 SCOP 102887 Coproporphyrinogen III oxidase
1 1 SCOP 102928 NifU/IscU domain
1 1 SCOP 103089 OmpA-like
1 1 SCOP 103474 Glycerol-3-phosphate transporter
1 1 SCOP 110112 Ctag/Cox11
1 1 SCOP 110902 FabZ-like
1 1 SCOP 111238 YfiH-like
1 1 SCOP 111305 Recombination protein RecR
1 1 SCOP 111338 QueA-like
1 1 SCOP 117888 Ribosomal protein L16p
1 1 SCOP 117917 NifU C-terminal domain-like
1 1 SCOP 117984 GGDEF domain
1 1 SCOP 118216 Proton glutamate symport protein
1 1 SCOP 140991 FtsH protease domain-like
1 1 SCOP 141245 Ribosomal protein L19
1 1 SCOP 141368 UbiD middle domain-like
1 1 SCOP 142020 Nqo1 FMN-binding domain-like
1 1 SCOP 142644 RPA4359-like
1 1 SCOP 143457 VC0467-like
1 1 SCOP 143642 LplA-like
1 1 SCOP 143812 GatB/GatE catalytic domain-like
1 1 SCOP 143969 UbiD C-terminal domain-like
1 1 SCOP 144028 Nqo4-like
1 1 SCOP 144031 Nq06-like
1 1 SCOP 159700 LPG1296-like
1 1 SCOP 159742 Atu1826-like
1 1 SCOP 159832 PBP transglycosylase domain-like
1 1 SCOP 161112 Cation efflux protein transmembrane domain-like

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The following families have one or more weak hits:

SCOP family MetI-like
SCOP family MgtE membrane domain-like
SCOP family CorC/HlyC domain-like
SCOP family Ribosomal protein L10-like
SCOP family Iojap/YbeB-like
SCOP family Cation efflux protein cytoplasmic domain-like
SCOP family VirB8-like
SCOP family TfoX N-terminal domain-like
SCOP family FucT-like
SCOP family mannose-1-phosphate guanylyl transferase
SCOP family AGR C 3712p-like
SCOP family MgtE N-terminal domain-like
SCOP family HAMP domain
SCOP family DsbB-like
SCOP family Ribosomal protein L33p
SCOP family Ribosomal protein L32p
SCOP family Magnesium transport protein CorA, transmembrane region
SCOP family Type I restriction modification DNA specificity domain
SCOP family YhfI-like
SCOP family Ribosomal protein L31p
SCOP family Ribosomal protein L28
SCOP family TRCF domain
SCOP family Nqo5-like
SCOP family YefM-like
SCOP family Ribosomal protein L35p
SCOP family RelE-like
SCOP family Nqo1 middle domain-like
SCOP family TrmB-like
SCOP family YhhF-like
SCOP family NQO2-like
SCOP family LD-carboxypeptidase A N-terminal domain-like
SCOP family LD-carboxypeptidase A C-terminal domain-like
SCOP family EAL domain
SCOP family LON domain-like
SCOP family Pentapeptide repeats
SCOP family CarD-like
SCOP family Ribosomal protein L21p
SCOP family Glu-tRNAGln amidotransferase C subunit
SCOP family Fic-like
SCOP family GatB/GatE C-terminal domain-like
SCOP family Nqo1C-terminal domain-like
SCOP family ChaB-like
SCOP family IscX-like
SCOP family FtsK C-terminal domain-like
SCOP family DNA mismatch repair protein MutL
SCOP family oligoketide cyclase/dehydrase-like
SCOP family Band 7/SPFH domain
SCOP family Acylamino-acid-releasing enzyme, C-terminal donain
SCOP family TrmE connector domain
SCOP family XseB-like
SCOP family Prokaryotic DksA/TraR C4-type zinc finger
SCOP family HlyD-like secretion proteins
SCOP family NAD kinase-like
SCOP family HSP90 C-terminal domain
SCOP family ParB-like nuclease domain
SCOP family Hypothetical protein SAV1430
SCOP family Glycosyl transferases group 1
SCOP family YeaZ-like
SCOP family Ppx/GppA phosphatase
SCOP family Methenyltetrahydrofolate synthetase
SCOP family Ribosomal L27 protein
SCOP family DR1885-like metal-binding protein
SCOP family TF C-terminus
SCOP family YgfY-like
SCOP family KorB DNA-binding domain-like
SCOP family DnaK suppressor protein DksA, alpha-hairpin domain
SCOP family ClpX chaperone zinc binding domain
SCOP family Autotransporter
SCOP family Preprotein translocase SecY subunit
SCOP family Predicted metal-dependent hydrolase
SCOP family Aminomethyltransferase folate-binding domain
SCOP family Cell division protein ZapA-like
SCOP family Trigger factor ribosome-binding domain
SCOP family Putative Holliday junction resolvase RuvX
SCOP family DNA polymerase III chi subunit
SCOP family NagD-like
SCOP family Oxygen-independent coproporphyrinogen III oxidase HemN
SCOP family Biotin synthase
SCOP family Hypothetical protein MraZ
SCOP family Peptidoglycan hydrolase LytM
SCOP family PqqC-like
SCOP family HD domain
SCOP family YutG-like
SCOP family Heat shock protein 70kD (HSP70), C-terminal subdomain
SCOP family Ribosome-binding factor A, RbfA
SCOP family UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC
SCOP family N5-glutamine methyltransferase, HemK
SCOP family Patatin
SCOP family YggJ C-terminal domain-like
SCOP family PIN domain
SCOP family Outer-membrane lipoproteins carrier protein LolA
SCOP family HesB-like domain
SCOP family N6 adenine-specific DNA methylase, DAM
SCOP family C5 cytosine-specific DNA methylase, DCM
SCOP family Alanine racemase
SCOP family Sigma4 domain
SCOP family Sigma3 domain
SCOP family GIY-YIG endonuclease
SCOP family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SCOP family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SCOP family N-utilization substance G protein NusG, N-terminal domain
SCOP family Poly A polymerase head domain-like
SCOP family BolA-like
SCOP family YbaB-like
SCOP family MraW-like putative methyltransferases
SCOP family PP-loop ATPase
SCOP family Heme chaperone CcmE
SCOP family Mechanosensitive channel protein MscS (YggB), middle domain
SCOP family Kid/PemK
SCOP family N-utilization substance G protein NusG, C-terminal domain
SCOP family Double Clp-N motif
SCOP family Poly A polymerase C-terminal region-like
SCOP family Porin chaperone SurA, peptide-binding domain
SCOP family Putative methyltransferase TM0872, insert domain
SCOP family Family 1 bi-partite nucleotidyltransferase subunit
SCOP family C-terminal, Zn-finger domain of MutM-like DNA repair proteins
SCOP family Middle domain of MutM-like DNA repair proteins
SCOP family N-terminal domain of MutM-like DNA repair proteins
SCOP family Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
SCOP family Cytochrome c oxidase subunit II-like, transmembrane region
SCOP family Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
SCOP family F1F0 ATP synthase subunit A
SCOP family F1F0 ATP synthase subunit C
SCOP family TGS domain
SCOP family Divalent ion tolerance proteins CutA (CutA1)
SCOP family YhbC-like, N-terminal domain
SCOP family N-acetyl-l-glutamate kinase
SCOP family Glucose-inhibited division protein B (GidB)
SCOP family YjeE-like
SCOP family YhbC-like, C-terminal domain
SCOP family YggU-like
SCOP family Ribosome binding protein Y (YfiA homologue)
SCOP family mono-SIS domain
SCOP family RecG "wedge" domain
SCOP family F1 ATPase inhibitor, IF1, C-terminal domain
SCOP family Holo-(acyl carrier protein) synthase ACPS
SCOP family Prokaryotic PEBP-like proteins
SCOP family TS-N domain
SCOP family MurE/MurF N-terminal domain
SCOP family Coiled-coil domain of nucleotide exchange factor GrpE
SCOP family DnaJ/Hsp40 cysteine-rich domain
SCOP family Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP family Ribosomal protein L36
SCOP family DNA primase zinc finger
SCOP family Ribosomal protein S14
SCOP family Outer membrane efflux proteins (OEP)
SCOP family Inositol monophosphatase/fructose-1,6-bisphosphatase-like
SCOP family Insert subdomain of RNA polymerase alpha subunit
SCOP family Penicillin binding protein dimerisation domain
SCOP family Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
SCOP family Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
SCOP family SAICAR synthase
SCOP family ATP-binding domain of peptide synthetases
SCOP family Ribosomal protein L6
SCOP family Nuclease
SCOP family DNA polymerase III, beta subunit
SCOP family Phosphoglucomutase, C-terminal domain
SCOP family Glutamine synthetase catalytic domain
SCOP family Histidine kinase
SCOP family YrdC-like
SCOP family N-acetyl transferase, NAT
SCOP family Biotin holoenzyme synthetase
SCOP family Ribosomal protein L9 N-domain
SCOP family Ribosomal protein L9 C-domain
SCOP family 6-pyruvoyl tetrahydropterin synthase
SCOP family Frataxin-like
SCOP family Dihydrodipicolinate reductase-like
SCOP family GAD domain
SCOP family RNA polymerase alpha subunit dimerisation domain
SCOP family Translation initiation factor IF3, C-terminal domain
SCOP family Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP family Ribosomal protein L30p/L7e
SCOP family 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
SCOP family Probable ACP-binding domain of malonyl-CoA ACP transacylase
SCOP family Bacterial exopeptidase dimerisation domain
SCOP family Ribosomal protein S6
SCOP family Anticodon-binding domain of PheRS
SCOP family Ferredoxin domains from multidomain proteins
SCOP family 7-Fe ferredoxin
SCOP family Ribosomal protein L22
SCOP family Prokaryotic type KH domain (KH-domain type II)
SCOP family Eukaryotic type KH-domain (KH-domain type I)
SCOP family Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
SCOP family Ribosomal S5 protein, N-terminal domain
SCOP family Double-stranded RNA-binding domain (dsRBD)
SCOP family RecA protein, C-terminal domain
SCOP family Ribosomal L11/L12e N-terminal domain
SCOP family Ribosomal protein L7/12, C-terminal domain
SCOP family CBS-domain pair
SCOP family Bacterial protein-export protein SecB
SCOP family Ribosomal protein S16
SCOP family GreA transcript cleavage factor, C-terminal domain
SCOP family FKBP immunophilin/proline isomerase
SCOP family Diaminopimelate epimerase
SCOP family Translation initiation factor IF3, N-terminal domain
SCOP family 2Fe-2S ferredoxin domains from multidomain proteins
SCOP family 2Fe-2S ferredoxin-related
SCOP family RNase P protein
SCOP family HIT (HINT, histidine triad) family of protein kinase-interacting proteins
SCOP family L23p
SCOP family LysM domain
SCOP family Adenain-like
SCOP family Bacterial muramidase, catalytic domain
SCOP family L-arabinose binding protein-like
SCOP family TroA-like
SCOP family Tetrapyrrole methylase
SCOP family Formate dehydrogenase/DMSO reductase, domains 1-3
SCOP family AraD-like aldolase/epimerase
SCOP family Dihydrofolate reductases
SCOP family Carboxylesterase/thioesterase 1
SCOP family UDP-glucose pyrophosphorylase
SCOP family Spore coat polysaccharide biosynthesis protein SpsA
SCOP family Phosphoribosylpyrophosphate synthetase-like
SCOP family Tetrahydrofolate dehydrogenase/cyclohydrolase
SCOP family Aminoacid dehydrogenases
SCOP family DNA repair protein MutS, domain II
SCOP family RuvC resolvase
SCOP family Creatinase/prolidase N-terminal domain
SCOP family TolB, N-terminal domain
SCOP family Anticodon-binding domain of Class II aaRS
SCOP family Glutathione S-transferase (GST), N-terminal domain
SCOP family Thioltransferase
SCOP family D-Alanine ligase N-terminal domain
SCOP family Universal stress protein-like
SCOP family UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
SCOP family N-type ATP pyrophosphatases
SCOP family Cytidylyltransferase
SCOP family L-alanine dehydrogenase-like
SCOP family Initiation factor IF2/eIF5b, domain 3
SCOP family DNA ligase
SCOP family Tail specific protease, catalytic domain
SCOP family Ribosomal proteins L15p and L18e
SCOP family 28-residue LRR
SCOP family Pyruvate phosphate dikinase, central domain
SCOP family 6-phosphogluconate dehydrogenase-like, N-terminal domain
SCOP family Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
SCOP family Dihydropteroate synthetase
SCOP family Alanine racemase-like, N-terminal domain
SCOP family Epsilon subunit of F1F0-ATP synthase N-terminal domain
SCOP family Type 1 signal peptidase
SCOP family BC C-terminal domain-like
SCOP family Biotinyl/lipoyl-carrier proteins and domains
SCOP family gamma-carbonic anhydrase-like
SCOP family Galactoside acetyltransferase-like
SCOP family Head domain of nucleotide exchange factor GrpE
SCOP family Quinoprotein alcohol dehydrogenase-like
SCOP family Prolyl oligopeptidase, N-terminal domain
SCOP family Ribosomal protein L25-like
SCOP family N-terminal domain of alpha and beta subunits of F1 ATP synthase
SCOP family 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
SCOP family Post formyltransferase domain
SCOP family NADH:FMN oxidoreductase-like
SCOP family DNA ligase/mRNA capping enzyme postcatalytic domain
SCOP family Myf domain
SCOP family DNA helicase RuvA subunit, N-terminal domain
SCOP family Anticodon-binding domain
SCOP family GroES
SCOP family eIF5a N-terminal domain-like
SCOP family Ribosomal proteins L24p and L21e
SCOP family Ecotin, trypsin inhibitor
SCOP family HSP20
SCOP family HSP40/DnaJ peptide-binding domain
SCOP family Aromatic compound dioxygenase
SCOP family Ankyrin repeat
SCOP family Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SCOP family Glycerol-3-phosphate dehydrogenase
SCOP family UDP-glucose/GDP-mannose dehydrogenase dimerisation domain
SCOP family HCDH C-domain-like
SCOP family R1 subunit of ribonucleotide reductase, N-terminal domain
SCOP family C-terminal domain of glutamyl-tRNA synthetase (GluRS)
SCOP family N-terminal domain of DnaB helicase
SCOP family Antitermination factor NusB
SCOP family 5' to 3' exonuclease, C-terminal subdomain
SCOP family NAD+-dependent DNA ligase, domain 3
SCOP family DNA helicase RuvA subunit, middle domain
SCOP family Prokaryotic DNA-bending protein
SCOP family SinR domain-like
SCOP family Homodimeric domain of signal transducing histidine kinase
SCOP family Domain of the SRP/SRP receptor G-proteins
SCOP family Acyl-carrier protein (ACP)
SCOP family Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SCOP family Ferritin
SCOP family Apolipoprotein
SCOP family Peptidoglycan binding domain, PGBD
SCOP family Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
SCOP family Ribosomal protein S20
SCOP family Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SCOP family Domains B1 and B5 of PheRS-beta, PheT
SCOP family DNA helicase RuvA subunit, C-terminal domain
SCOP family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
SCOP family Ribosomal protein S18
SCOP family Ribosomal protein L11, C-terminal domain
SCOP family PhoB-like
SCOP family Helicase DNA-binding domain
SCOP family Methylated DNA-protein cysteine methyltransferase, C-terminal domain
SCOP family monodomain cytochrome c
SCOP family C-terminal UvrC-binding domain of UvrB
SCOP family Phenylalanyl-tRNA synthetase (PheRS)
SCOP family Seryl-tRNA synthetase (SerRS)
SCOP family Chaperone J-domain
SCOP family Ribosomal protein L29 (L29p)
SCOP family GreA transcript cleavage protein, N-terminal domain

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