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Prochlorococcus marinus str. NATL2A superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Cyanobacteria/Melainabacteria group; Cyanobacteria; Synechococcales; Prochloraceae; Prochlorococcus; Prochlorococcus marinus; Prochlorococcus marinus str. NATL2A

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 2162 total
1185 (55 %) with assignment
248 average length
64 % amino acid coverage
Domains: 1686 total
570 unique superfamilies
366 unique families
291 average length
3 average superfamily size
66 % formed by duplication
Domain combinations: 298 domain pairs
712 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

137 119 49 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
52 52 17 5 SCOP 51735 NAD(P)-binding Rossmann-fold domains
30 30 9 4 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
28 21 16 3 SCOP 50249 Nucleic acid-binding proteins
26 24 10 1 SCOP 51905 FAD/NAD(P)-binding domain
25 24 4 4 SCOP 53383 PLP-dependent transferases
25 20 9 1 SCOP 48452 TPR-like
23 23 7 3 SCOP 52833 Thioredoxin-like
19 19 2 0 SCOP 103511 Chlorophyll a-b binding protein
18 11 7 2 SCOP 53067 Actin-like ATPase domain
16 14 6 3 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
15 12 9 5 SCOP 54211 Ribosomal protein S5 domain 2-like
14 14 11 4 SCOP 52374 Nucleotidylyl transferase
14 14 10 2 SCOP 55681 Class II aaRS and biotin synthetases
13 13 5 1 SCOP 53474 alpha/beta-Hydrolases
13 8 8 0 SCOP 55021 ACT-like
12 12 4 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
12 12 6 2 SCOP 52317 Class I glutamine amidotransferase-like
12 11 8 0 SCOP 46785 "Winged helix" DNA-binding domain
10 8 3 0 SCOP 161098 MetI-like
10 6 5 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
10 10 5 1 SCOP 53850 Periplasmic binding protein-like II
10 10 3 1 SCOP 102114 Radical SAM enzymes
10 10 2 4 SCOP 52096 ClpP/crotonase
10 9 8 2 SCOP 50447 Translation proteins
10 5 2 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
10 10 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
9 8 4 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
9 9 2 3 SCOP 51569 Aldolase
9 9 3 1 SCOP 53098 Ribonuclease H-like
9 9 1 1 SCOP 161077 Photosystem II antenna protein-like
8 8 3 0 SCOP 56784 HAD-like
8 8 6 2 SCOP 75217 alpha/beta knot
8 8 5 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
8 7 3 1 SCOP 52440 PreATP-grasp domain
7 7 1 4 SCOP 51366 Ribulose-phoshate binding barrel
7 7 5 1 SCOP 55174 Alpha-L RNA-binding motif
7 7 3 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
7 7 6 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
7 7 5 0 SCOP 46565 Chaperone J-domain
7 7 3 1 SCOP 90123 ABC transporter transmembrane region
7 4 3 1 SCOP 54980 EF-G C-terminal domain-like
6 6 3 2 SCOP 53271 PRTase-like
6 6 4 1 SCOP 53790 Tetrapyrrole methylase
6 6 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
6 6 4 3 SCOP 51161 Trimeric LpxA-like enzymes
6 6 3 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
6 6 3 1 SCOP 50475 FMN-binding split barrel
6 6 2 1 SCOP 51182 RmlC-like cupins
6 5 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
6 6 4 1 SCOP 52172 CheY-like
6 6 1 0 SCOP 54909 Dimeric alpha+beta barrel
6 6 3 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
6 6 4 0 SCOP 50156 PDZ domain-like
6 6 5 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 2 1 1 SCOP 53738 Phosphoglucomutase, first 3 domains
6 3 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
5 5 3 4 SCOP 51556 Metallo-dependent hydrolases
5 5 3 0 SCOP 56112 Protein kinase-like (PK-like)
5 5 5 2 SCOP 50104 Translation proteins SH3-like domain
5 5 2 1 SCOP 47240 Ferritin-like
5 5 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 1 0 SCOP 56935 Porins
5 5 2 1 SCOP 51395 FMN-linked oxidoreductases
5 5 4 1 SCOP 109604 HD-domain/PDEase-like
5 5 5 1 SCOP 51445 (Trans)glycosidases
5 5 3 0 SCOP 51306 LexA/Signal peptidase
5 5 3 0 SCOP 56601 beta-lactamase/transpeptidase-like
5 4 3 1 SCOP 53807 "Helical backbone" metal receptor
5 5 2 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
5 5 3 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
5 5 5 2 SCOP 88697 PUA domain-like
5 3 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
5 5 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 2 1 SCOP 51246 Rudiment single hybrid motif
5 3 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
5 5 4 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
5 5 2 0 SCOP 51120 beta-Roll
5 5 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 4 3 1 SCOP 56042 PurM C-terminal domain-like
5 4 3 1 SCOP 55326 PurM N-terminal domain-like
4 4 2 0 SCOP 53613 Ribokinase-like
4 4 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
4 4 3 3 SCOP 55120 Pseudouridine synthase
4 4 2 1 SCOP 52218 Flavoproteins
4 4 1 0 SCOP 103473 MFS general substrate transporter
4 4 1 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 3 2 SCOP 53633 Carbamate kinase-like
4 4 2 1 SCOP 54862 4Fe-4S ferredoxins
4 4 1 0 SCOP 54292 2Fe-2S ferredoxin-like
4 4 1 2 SCOP 56655 Carbohydrate phosphatase
4 4 4 1 SCOP 51419 PLP-binding barrel
4 4 4 4 SCOP 53187 Zn-dependent exopeptidases
4 4 1 0 SCOP 48371 ARM repeat
4 4 4 1 SCOP 50891 Cyclophilin-like
4 4 4 1 SCOP 53328 Formyltransferase
4 4 1 0 SCOP 54427 NTF2-like
4 4 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
4 4 3 1 SCOP 54631 CBS-domain pair
4 4 1 0 SCOP 141571 Pentapeptide repeat-like
4 4 3 1 SCOP 81301 Nucleotidyltransferase
4 3 3 0 SCOP 101386 all-alpha NTP pyrophosphatases
4 2 1 0 SCOP 63411 LuxS/MPP-like metallohydrolase
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 3 3 0 SCOP 50346 PRC-barrel domain
4 4 3 0 SCOP 47616 GST C-terminal domain-like
4 4 4 0 SCOP 56176 FAD-binding/transporter-associated domain-like
4 4 1 1 SCOP 140990 FtsH protease domain-like
4 2 1 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
3 3 3 2 SCOP 53927 Cytidine deaminase-like
3 3 3 3 SCOP 53697 SIS domain
3 3 2 1 SCOP 46946 S13-like H2TH domain
3 3 2 1 SCOP 100950 NagB/RpiA/CoA transferase-like
3 3 1 1 SCOP 75620 Release factor
3 3 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 3 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
3 3 1 2 SCOP 53720 ALDH-like
3 3 3 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 1 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
3 3 1 1 SCOP 48576 Terpenoid synthases
3 3 3 1 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
3 3 3 1 SCOP 56801 Acetyl-CoA synthetase-like
3 2 2 0 SCOP 81296 E set domains
3 3 3 1 SCOP 54534 FKBP-like
3 3 1 1 SCOP 56322 ADC synthase
3 3 2 0 SCOP 49785 Galactose-binding domain-like
3 3 3 1 SCOP 56317 Carbon-nitrogen hydrolase
3 3 2 0 SCOP 54928 RNA-binding domain, RBD
3 3 1 1 SCOP 52972 ITPase-like
3 3 2 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 2 1 SCOP 53800 Chelatase
3 3 3 2 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 3 0 SCOP 81324 Voltage-gated potassium channels
3 3 2 0 SCOP 52091 SpoIIaa-like
3 3 2 1 SCOP 143414 CcmK-like
3 3 3 1 SCOP 52016 LeuD/IlvD-like
3 3 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
3 3 3 1 SCOP 51230 Single hybrid motif
3 3 2 0 SCOP 51206 cAMP-binding domain-like
3 3 1 1 SCOP 54913 GlnB-like
3 3 3 0 SCOP 54736 ClpS-like
3 3 2 0 SCOP 111369 HlyD-like secretion proteins
3 3 3 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
3 2 2 2 SCOP 53901 Thiolase-like
3 3 3 1 SCOP 47781 RuvA domain 2-like
3 3 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 2 2 1 SCOP 48592 GroEL equatorial domain-like
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 0 SCOP 81923 Double Clp-N motif
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 3 1 SCOP 56719 Type II DNA topoisomerase
3 3 2 1 SCOP 52922 TK C-terminal domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 2 2 0 SCOP 116726 TrkA C-terminal domain-like
3 3 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
3 2 2 1 SCOP 63380 Riboflavin synthase domain-like
3 3 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 1 SCOP 81271 TGS-like
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 2 1 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 2 2 0 SCOP 53597 Dihydrofolate reductase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 50324 Inorganic pyrophosphatase
2 2 2 0 SCOP 52980 Restriction endonuclease-like
2 2 2 1 SCOP 55068 Peptide methionine sulfoxide reductase
2 2 1 0 SCOP 51730 FAD-linked oxidoreductase
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 2 1 SCOP 48150 DNA-glycosylase
2 2 1 0 SCOP 89360 HesB-like domain
2 2 2 0 SCOP 55811 Nudix
2 1 1 0 SCOP 53254 Phosphoglycerate mutase-like
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
2 2 1 1 SCOP 55298 YjgF-like
2 2 1 2 SCOP 56796 Dehydroquinate synthase-like
2 1 1 0 SCOP 50985 RCC1/BLIP-II
2 2 2 0 SCOP 51430 NAD(P)-linked oxidoreductase
2 2 2 0 SCOP 55315 L30e-like
2 2 2 2 SCOP 56672 DNA/RNA polymerases
2 2 2 1 SCOP 88723 PIN domain-like
2 2 1 0 SCOP 46626 Cytochrome c
2 2 2 1 SCOP 54001 Cysteine proteinases
2 2 1 0 SCOP 55248 PCD-like
2 1 1 1 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 2 0 SCOP 55781 GAF domain-like
2 2 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
2 2 2 0 SCOP 55961 Bet v1-like
2 2 1 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 1 1 SCOP 46458 Globin-like
2 2 2 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
2 2 1 0 SCOP 81544 Subunit IX of photosystem I reaction centre, PsaJ
2 2 2 1 SCOP 161045 Cytochrome b559 subunits
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
2 2 1 1 SCOP 50494 Trypsin-like serine proteases
2 2 2 0 SCOP 47598 Ribbon-helix-helix
2 2 2 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 1 SCOP 50022 ISP domain
2 2 2 1 SCOP 49503 Cupredoxins
2 2 2 0 SCOP 89550 PHP domain-like
2 2 2 0 SCOP 55166 Hedgehog/DD-peptidase
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 2 2 SCOP 52467 DHS-like NAD/FAD-binding domain
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 2 0 SCOP 69065 RNase III domain-like
2 2 1 1 SCOP 159133 EutN/CcmL-like
2 1 1 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 0 SCOP 50486 FMT C-terminal domain-like
2 1 1 0 SCOP 89963 YajQ-like
2 2 1 1 SCOP 51604 Enolase C-terminal domain-like
2 1 1 1 SCOP 56024 Phospholipase D/nuclease
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
2 2 1 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
2 1 1 0 SCOP 54106 LysM domain
2 2 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 2 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 2 0 SCOP 51011 Glycosyl hydrolase domain
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 2 1 SCOP 52029 GroEL apical domain-like
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
2 2 1 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 0 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 81606 PP2C-like
1 1 1 1 SCOP 142433 CinA-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56300 Metallo-dependent phosphatases
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 0 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 50129 GroES-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 0 SCOP 82784 OsmC-like
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 0 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 142695 RibA-like
1 1 1 0 SCOP 101908 Putative isomerase YbhE
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 0 SCOP 82657 BolA-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 64307 SirA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 50182 Sm-like ribonucleoproteins
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 0 SCOP 50978 WD40 repeat-like
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 1 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 1 SCOP 53649 Alkaline phosphatase-like
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 74650 Galactose mutarotase-like
1 1 1 0 SCOP 48208 Six-hairpin glycosidases
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 55159 eIF1-like
1 1 1 0 SCOP 55008 HMA, heavy metal-associated domain
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 52266 SGNH hydrolase
1 1 1 1 SCOP 52151 FabD/lysophospholipase-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
1 1 1 1 SCOP 141734 HisI-like
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 103446 PetG subunit of the cytochrome b6f complex
1 1 1 0 SCOP 103451 PetN subunit of the cytochrome b6f complex
1 1 1 1 SCOP 64234 Photosystem I subunit PsaD
1 1 1 0 SCOP 50090 Electron transport accessory proteins
1 1 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 0 SCOP 81540 Subunit VIII of photosystem I reaction centre, PsaI
1 1 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
1 1 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
1 1 1 0 SCOP 161025 Photosystem II 10 kDa phosphoprotein PsbH
1 1 1 0 SCOP 161041 Photosystem II reaction center protein I, PsbI
1 1 1 0 SCOP 161021 Photosystem II reaction center protein J, PsbJ
1 1 1 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
1 1 1 0 SCOP 161017 Photosystem II reaction center protein L, PsbL
1 1 1 0 SCOP 161029 Photosystem II reaction center protein T, PsbT
1 1 1 0 SCOP 161055 PsbZ-like
1 1 1 1 SCOP 55239 RuBisCO, small subunit
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 1 SCOP 109770 Nickel-containing superoxide dismutase, NiSOD
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 160532 Ava3019-like
1 1 1 0 SCOP 46955 Putative DNA-binding domain
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 57783 Zinc beta-ribbon
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 161033 Photosystem II reaction center protein M, PsbM
1 1 1 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 53300 vWA-like
1 1 1 0 SCOP 56954 Outer membrane efflux proteins (OEP)
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 102215 Creatininase
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 101112 Oxygen-evolving enhancer protein 3,
1 1 1 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 1 SCOP 53822 Periplasmic binding protein-like I
1 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 55785 PYP-like sensor domain (PAS domain)
1 1 1 0 SCOP 144010 CofE-like
1 1 1 1 SCOP 161070 SNF-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 0 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 0 SCOP 52242 Cobalamin (vitamin B12)-binding domain
1 1 1 1 SCOP 142338 CofD-like
1 1 1 1 SCOP 56925 OMPA-like
1 1 1 0 SCOP 52309 N-(deoxy)ribosyltransferase-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 159672 CbiG N-terminal domain-like
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 46548 alpha-helical ferredoxin
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 52777 CoA-dependent acyltransferases
1 1 1 1 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 1 SCOP 142823 ComB-like
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 111342 CbiD-like
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 81665 Calcium ATPase, transmembrane domain M
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 69287 Urease metallochaperone UreE, N-terminal domain
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 51649 RuBisCo, C-terminal domain
1 1 1 0 SCOP 81653 Calcium ATPase, transduction domain A
1 1 1 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 1 SCOP 49441 Cytochrome f, large domain
1 1 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 0 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 69737 Urease metallochaperone UreE, C-terminal domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 160996 HI0933 insert domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily L-sulfolactate dehydrogenase-like
SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily Baseplate structural protein gp8
SCOP superfamily GAT-like domain
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily SET domain
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Cullin repeat-like
SCOP superfamily DTD-like
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Tudor/PWWP/MBT
SCOP superfamily RPB6/omega subunit-like
SCOP superfamily Tropomyosin
SCOP superfamily RING/U-box
SCOP superfamily Diphtheria toxin, middle domain
SCOP superfamily Thymidylate synthase/dCMP hydroxymethylase
SCOP superfamily Acylphosphatase/BLUF domain-like
SCOP superfamily POZ domain
SCOP superfamily His-Me finger endonucleases
SCOP superfamily Eukaryotic RPB5 N-terminal domain
SCOP superfamily C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
SCOP superfamily Lipocalins
SCOP superfamily FucI/AraA C-terminal domain-like
SCOP superfamily Staphylococcal nuclease
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily Clathrin adaptor appendage domain
SCOP superfamily CBD9-like
SCOP superfamily Cadherin-like
SCOP superfamily Fungal elicitin
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Acid phosphatase/Vanadium-dependent haloperoxidase
SCOP superfamily Cytochrome P450
SCOP superfamily FliG
SCOP superfamily t-snare proteins
SCOP superfamily Calponin-homology domain, CH-domain
SCOP superfamily EF-hand
SCOP superfamily Apolipoprotein
SCOP superfamily Homeodomain-like
SCOP superfamily Prefoldin
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily CHY zinc finger-like
SCOP superfamily Plus3-like
SCOP superfamily YopX-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily GINS helical bundle-like
SCOP superfamily SOCS box-like
SCOP superfamily Tim10-like
SCOP superfamily ERH-like
SCOP superfamily THUMP domain-like
SCOP superfamily YjbR-like
SCOP superfamily Indolic compounds 2,3-dioxygenase-like
SCOP superfamily YidB-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily Type III secretion system domain
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily RalF, C-terminal domain
SCOP superfamily YehU-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily OmpH-like
SCOP superfamily Sporulation related repeat
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Mitochondrial carrier
SCOP superfamily Preprotein translocase SecE subunit
SCOP superfamily PetM subunit of the cytochrome b6f complex
SCOP superfamily PetL subunit of the cytochrome b6f complex
SCOP superfamily TT1751-like
SCOP superfamily YcfC-like
SCOP superfamily XPC-binding domain
SCOP superfamily Docking domain B of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Phosphoprotein XD domain
SCOP superfamily Heat shock protein 70kD (HSP70), C-terminal subdomain

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