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Prochlorococcus marinus str. MIT 9313 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Cyanobacteria/Melainabacteria group; Cyanobacteria; Synechococcales; Prochloraceae; Prochlorococcus; Prochlorococcus marinus; Prochlorococcus marinus str. MIT 9313

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 2269 total
1409 (62 %) with assignment
289 average length
63 % amino acid coverage
Domains: 1989 total
596 unique superfamilies
392 unique families
292 average length
3.3 average superfamily size
70 % formed by duplication
Domain combinations: 317 domain pairs
805 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

164 143 53 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
52 52 18 5 SCOP 51735 NAD(P)-binding Rossmann-fold domains
37 37 10 3 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
32 30 12 1 SCOP 51905 FAD/NAD(P)-binding domain
31 19 11 0 SCOP 48452 TPR-like
30 23 18 2 SCOP 50249 Nucleic acid-binding proteins
29 28 5 5 SCOP 53383 PLP-dependent transferases
25 25 8 3 SCOP 52833 Thioredoxin-like
21 21 6 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
21 13 8 2 SCOP 53067 Actin-like ATPase domain
21 21 5 4 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
17 17 4 0 SCOP 53474 alpha/beta-Hydrolases
17 16 9 0 SCOP 46785 "Winged helix" DNA-binding domain
17 17 7 1 SCOP 53850 Periplasmic binding protein-like II
17 14 10 5 SCOP 54211 Ribosomal protein S5 domain 2-like
17 9 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
15 13 3 1 SCOP 161098 MetI-like
15 15 11 4 SCOP 52374 Nucleotidylyl transferase
15 15 5 1 SCOP 102114 Radical SAM enzymes
14 14 10 2 SCOP 55681 Class II aaRS and biotin synthetases
13 13 7 2 SCOP 52317 Class I glutamine amidotransferase-like
13 8 8 0 SCOP 55021 ACT-like
12 12 4 5 SCOP 51569 Aldolase
12 7 6 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
12 12 3 1 SCOP 90123 ABC transporter transmembrane region
11 11 4 1 SCOP 56784 HAD-like
10 10 6 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
10 10 2 4 SCOP 52096 ClpP/crotonase
10 10 5 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
10 10 2 2 SCOP 51182 RmlC-like cupins
10 9 8 2 SCOP 50447 Translation proteins
10 10 2 0 SCOP 103511 Chlorophyll a-b binding protein
10 10 4 1 SCOP 46894 C-terminal effector domain of the bipartite response regulators
10 10 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
9 9 1 4 SCOP 51366 Ribulose-phoshate binding barrel
9 9 3 1 SCOP 53098 Ribonuclease H-like
9 9 2 0 SCOP 103473 MFS general substrate transporter
9 9 5 1 SCOP 52172 CheY-like
9 9 6 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
9 9 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
8 7 3 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
8 8 6 2 SCOP 75217 alpha/beta knot
8 8 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
8 8 3 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
8 7 5 0 SCOP 111369 HlyD-like secretion proteins
8 4 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
8 8 6 0 SCOP 50156 PDZ domain-like
8 8 6 0 SCOP 56176 FAD-binding/transporter-associated domain-like
8 7 3 1 SCOP 52440 PreATP-grasp domain
8 3 2 1 SCOP 53738 Phosphoglucomutase, first 3 domains
7 7 3 2 SCOP 53271 PRTase-like
7 7 4 0 SCOP 56112 Protein kinase-like (PK-like)
7 7 4 3 SCOP 55120 Pseudouridine synthase
7 7 3 0 SCOP 56300 Metallo-dependent phosphatases
7 7 2 2 SCOP 47240 Ferritin-like
7 7 5 1 SCOP 55174 Alpha-L RNA-binding motif
7 7 4 0 SCOP 54862 4Fe-4S ferredoxins
7 7 3 0 SCOP 141571 Pentapeptide repeat-like
7 6 5 0 SCOP 51206 cAMP-binding domain-like
7 7 4 0 SCOP 46565 Chaperone J-domain
7 4 3 1 SCOP 54980 EF-G C-terminal domain-like
6 6 2 4 SCOP 51556 Metallo-dependent hydrolases
6 6 4 1 SCOP 53790 Tetrapyrrole methylase
6 6 4 2 SCOP 51161 Trimeric LpxA-like enzymes
6 5 2 0 SCOP 48371 ARM repeat
6 6 3 3 SCOP 50475 FMN-binding split barrel
6 6 5 2 SCOP 51445 (Trans)glycosidases
6 5 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
6 6 5 1 SCOP 54631 CBS-domain pair
6 6 4 1 SCOP 56601 beta-lactamase/transpeptidase-like
6 6 3 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
6 4 2 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
6 6 5 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 2 2 0 SCOP 54106 LysM domain
6 6 4 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
6 6 4 0 SCOP 51120 beta-Roll
6 2 1 1 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
6 3 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
5 5 5 2 SCOP 50104 Translation proteins SH3-like domain
5 5 3 2 SCOP 100950 NagB/RpiA/CoA transferase-like
5 5 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 2 1 SCOP 54292 2Fe-2S ferredoxin-like
5 5 4 1 SCOP 109604 HD-domain/PDEase-like
5 5 3 0 SCOP 51306 LexA/Signal peptidase
5 5 4 0 SCOP 81324 Voltage-gated potassium channels
5 5 2 0 SCOP 143422 Transposase IS200-like
5 5 1 0 SCOP 54909 Dimeric alpha+beta barrel
5 5 4 1 SCOP 53955 Lysozyme-like
5 5 5 2 SCOP 88697 PUA domain-like
5 3 2 2 SCOP 53901 Thiolase-like
5 5 5 0 SCOP 46548 alpha-helical ferredoxin
5 5 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 2 1 SCOP 51246 Rudiment single hybrid motif
5 3 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
5 5 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 4 3 1 SCOP 56042 PurM C-terminal domain-like
5 4 3 1 SCOP 55326 PurM N-terminal domain-like
4 4 2 1 SCOP 53613 Ribokinase-like
4 4 4 3 SCOP 53697 SIS domain
4 4 2 1 SCOP 52218 Flavoproteins
4 4 2 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 4 1 SCOP 52980 Restriction endonuclease-like
4 4 3 2 SCOP 53633 Carbamate kinase-like
4 4 1 2 SCOP 56655 Carbohydrate phosphatase
4 3 2 0 SCOP 53254 Phosphoglycerate mutase-like
4 4 2 1 SCOP 51395 FMN-linked oxidoreductases
4 4 4 1 SCOP 51419 PLP-binding barrel
4 4 4 4 SCOP 53187 Zn-dependent exopeptidases
4 4 3 0 SCOP 50182 Sm-like ribonucleoproteins
4 4 1 1 SCOP 46626 Cytochrome c
4 4 4 1 SCOP 88713 Glycoside hydrolase/deacetylase
4 4 2 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
4 4 1 1 SCOP 161077 Photosystem II antenna protein-like
4 4 2 1 SCOP 53807 "Helical backbone" metal receptor
4 4 1 0 SCOP 56349 DNA breaking-rejoining enzymes
4 4 3 1 SCOP 81301 Nucleotidyltransferase
4 4 2 0 SCOP 56954 Outer membrane efflux proteins (OEP)
4 4 3 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
4 3 3 0 SCOP 101386 all-alpha NTP pyrophosphatases
4 2 1 0 SCOP 63411 LuxS/MPP-like metallohydrolase
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 0 SCOP 50486 FMT C-terminal domain-like
4 4 2 0 SCOP 82171 DPP6 N-terminal domain-like
4 4 4 0 SCOP 47616 GST C-terminal domain-like
4 4 3 1 SCOP 52922 TK C-terminal domain-like
4 3 3 0 SCOP 116726 TrkA C-terminal domain-like
4 4 1 1 SCOP 140990 FtsH protease domain-like
4 2 1 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
4 2 1 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
3 3 3 2 SCOP 53927 Cytidine deaminase-like
3 3 2 1 SCOP 54197 HIT-like
3 3 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 1 1 SCOP 75620 Release factor
3 3 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 3 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
3 3 3 0 SCOP 51261 Duplicated hybrid motif
3 3 1 2 SCOP 53720 ALDH-like
3 3 3 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 0 SCOP 55811 Nudix
3 3 1 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
3 3 1 1 SCOP 48576 Terpenoid synthases
3 3 3 1 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
3 3 3 0 SCOP 51430 NAD(P)-linked oxidoreductase
3 3 3 1 SCOP 56801 Acetyl-CoA synthetase-like
3 3 2 1 SCOP 48613 Heme oxygenase-like
3 2 2 0 SCOP 81296 E set domains
3 3 3 0 SCOP 50891 Cyclophilin-like
3 3 3 1 SCOP 53328 Formyltransferase
3 3 3 1 SCOP 54534 FKBP-like
3 3 1 1 SCOP 56322 ADC synthase
3 3 3 1 SCOP 56317 Carbon-nitrogen hydrolase
3 3 2 0 SCOP 54928 RNA-binding domain, RBD
3 3 1 2 SCOP 52972 ITPase-like
3 3 1 0 SCOP 51197 Clavaminate synthase-like
3 3 2 0 SCOP 55961 Bet v1-like
3 3 3 1 SCOP 53800 Chelatase
3 3 3 2 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 2 0 SCOP 52091 SpoIIaa-like
3 3 2 1 SCOP 143414 CcmK-like
3 3 2 1 SCOP 50494 Trypsin-like serine proteases
3 3 3 1 SCOP 52016 LeuD/IlvD-like
3 3 2 0 SCOP 54523 Pili subunits
3 3 3 1 SCOP 51230 Single hybrid motif
3 3 1 1 SCOP 54913 GlnB-like
3 3 3 0 SCOP 54736 ClpS-like
3 3 1 0 SCOP 50331 MOP-like
3 3 3 1 SCOP 47781 RuvA domain 2-like
3 2 2 0 SCOP 50346 PRC-barrel domain
3 3 2 0 SCOP 50199 Staphylococcal nuclease
3 3 2 0 SCOP 46589 tRNA-binding arm
3 2 2 1 SCOP 48592 GroEL equatorial domain-like
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 3 2 0 SCOP 81923 Double Clp-N motif
3 3 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 3 1 SCOP 56719 Type II DNA topoisomerase
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 1 SCOP 56436 C-type lectin-like
3 3 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
3 2 2 1 SCOP 63380 Riboflavin synthase domain-like
3 3 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 1 SCOP 81271 TGS-like
3 2 2 1 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 1 SCOP 75304 Amidase signature (AS) enzymes
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 2 2 0 SCOP 53597 Dihydrofolate reductase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 50324 Inorganic pyrophosphatase
2 2 2 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 2 1 SCOP 55068 Peptide methionine sulfoxide reductase
2 2 1 1 SCOP 51316 Mss4-like
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 2 2 SCOP 48150 DNA-glycosylase
2 2 1 0 SCOP 89360 HesB-like domain
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
2 2 1 1 SCOP 55298 YjgF-like
2 2 1 2 SCOP 56796 Dehydroquinate synthase-like
2 2 2 0 SCOP 47473 EF-hand
2 2 2 0 SCOP 55315 L30e-like
2 2 2 1 SCOP 56672 DNA/RNA polymerases
2 2 1 1 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
2 2 2 1 SCOP 88723 PIN domain-like
2 2 2 2 SCOP 53649 Alkaline phosphatase-like
2 2 2 2 SCOP 54001 Cysteine proteinases
2 2 2 0 SCOP 49785 Galactose-binding domain-like
2 2 1 0 SCOP 55248 PCD-like
2 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 2 0 SCOP 74650 Galactose mutarotase-like
2 2 2 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 2 0 SCOP 48208 Six-hairpin glycosidases
2 2 2 0 SCOP 55781 GAF domain-like
2 2 2 0 SCOP 110849 ParB/Sulfiredoxin
2 2 2 0 SCOP 52266 SGNH hydrolase
2 2 1 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 1 1 SCOP 46458 Globin-like
2 2 2 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
2 2 1 1 SCOP 161045 Cytochrome b559 subunits
2 2 2 0 SCOP 161084 MAPEG domain-like
2 2 2 0 SCOP 102405 MCP/YpsA-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 1 1 SCOP 55073 Nucleotide cyclase
2 2 2 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
2 2 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 1 SCOP 50022 ISP domain
2 2 2 1 SCOP 49503 Cupredoxins
2 2 2 0 SCOP 89550 PHP domain-like
2 2 1 0 SCOP 55166 Hedgehog/DD-peptidase
2 2 2 0 SCOP 53300 vWA-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 1 SCOP 81340 Clc chloride channel
2 2 1 0 SCOP 102215 Creatininase
2 2 2 2 SCOP 52467 DHS-like NAD/FAD-binding domain
2 2 1 1 SCOP 53822 Periplasmic binding protein-like I
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 2 0 SCOP 69065 RNase III domain-like
2 2 1 1 SCOP 159133 EutN/CcmL-like
2 2 1 1 SCOP 160935 VPA0735-like
2 1 1 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 0 SCOP 57802 Rubredoxin-like
2 2 2 0 SCOP 55785 PYP-like sensor domain (PAS domain)
2 2 2 0 SCOP 53041 Resolvase-like
2 2 1 1 SCOP 56925 OMPA-like
2 1 1 0 SCOP 89963 YajQ-like
2 2 1 1 SCOP 51604 Enolase C-terminal domain-like
2 1 1 1 SCOP 56024 Phospholipase D/nuclease
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 1 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
2 2 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 2 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 2 0 SCOP 51011 Glycosyl hydrolase domain
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 2 1 SCOP 52029 GroEL apical domain-like
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 1 0 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
2 2 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 117892 Band 7/SPFH domain
2 2 2 0 SCOP 102735 Trigger factor ribosome-binding domain
2 2 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
2 2 2 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 143597 YojJ-like
1 1 1 1 SCOP 142433 CinA-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 50129 GroES-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 0 SCOP 82784 OsmC-like
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 51730 FAD-linked oxidoreductase
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 142695 RibA-like
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 0 SCOP 82657 BolA-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 64307 SirA-like
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 57997 Tropomyosin
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 55159 eIF1-like
1 1 1 0 SCOP 55008 HMA, heavy metal-associated domain
1 1 1 0 SCOP 56399 ADP-ribosylation
1 1 1 1 SCOP 52151 FabD/lysophospholipase-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
1 1 1 1 SCOP 141734 HisI-like
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 103446 PetG subunit of the cytochrome b6f complex
1 1 1 0 SCOP 103451 PetN subunit of the cytochrome b6f complex
1 1 1 1 SCOP 64234 Photosystem I subunit PsaD
1 1 1 0 SCOP 50090 Electron transport accessory proteins
1 1 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 0 SCOP 81540 Subunit VIII of photosystem I reaction centre, PsaI
1 1 1 0 SCOP 81544 Subunit IX of photosystem I reaction centre, PsaJ
1 1 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
1 1 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
1 1 1 0 SCOP 161025 Photosystem II 10 kDa phosphoprotein PsbH
1 1 1 0 SCOP 161041 Photosystem II reaction center protein I, PsbI
1 1 1 0 SCOP 161021 Photosystem II reaction center protein J, PsbJ
1 1 1 0 SCOP 161037 Photosystem II reaction center protein K, PsbK
1 1 1 0 SCOP 161017 Photosystem II reaction center protein L, PsbL
1 1 1 0 SCOP 161029 Photosystem II reaction center protein T, PsbT
1 1 1 0 SCOP 161055 PsbZ-like
1 1 1 1 SCOP 55239 RuBisCO, small subunit
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 55718 SCP-like
1 1 1 0 SCOP 109770 Nickel-containing superoxide dismutase, NiSOD
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
1 1 1 0 SCOP 160532 Ava3019-like
1 1 1 0 SCOP 46955 Putative DNA-binding domain
1 1 1 0 SCOP 48264 Cytochrome P450
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 0 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 57783 Zinc beta-ribbon
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 103256 Hypothetical protein TM0160
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 161033 Photosystem II reaction center protein M, PsbM
1 1 1 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 158682 TerB-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 101112 Oxygen-evolving enhancer protein 3,
1 1 1 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 103088 OmpA-like
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
1 1 1 0 SCOP 140478 LemA-like
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 0 SCOP 144010 CofE-like
1 1 1 1 SCOP 161070 SNF-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 0 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 0 SCOP 52242 Cobalamin (vitamin B12)-binding domain
1 1 1 1 SCOP 142338 CofD-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 75005 Arabinanase/levansucrase/invertase
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 159672 CbiG N-terminal domain-like
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 52777 CoA-dependent acyltransferases
1 1 1 1 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 1 SCOP 142823 ComB-like
1 1 1 0 SCOP 101898 NHL repeat
1 1 1 0 SCOP 49772 Ecotin, trypsin inhibitor
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 47077 T4 endonuclease V
1 1 1 0 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 111342 CbiD-like
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 81665 Calcium ATPase, transmembrane domain M
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 51269 AFP III-like domain
1 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 51649 RuBisCo, C-terminal domain
1 1 1 0 SCOP 81653 Calcium ATPase, transduction domain A
1 1 1 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 1 SCOP 49441 Cytochrome f, large domain
1 1 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 0 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 69737 Urease metallochaperone UreE, C-terminal domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 160996 HI0933 insert domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily Zn-finger domain of Sec23/24
SCOP superfamily BRCA2 tower domain
SCOP superfamily Family 10 polysaccharide lyase
SCOP superfamily PP2C-like
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Type III secretory system chaperone-like
SCOP superfamily Phage fibre proteins
SCOP superfamily Urease metallochaperone UreE, N-terminal domain
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily Tudor/PWWP/MBT
SCOP superfamily RPB6/omega subunit-like
SCOP superfamily Fumarylacetoacetate hydrolase, FAH, N-terminal domain
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Complement control module/SCR domain
SCOP superfamily Growth factor receptor domain
SCOP superfamily Porins
SCOP superfamily Prismane protein-like
SCOP superfamily LDH C-terminal domain-like
SCOP superfamily Alpha-lytic protease prodomain
SCOP superfamily Succinyl-CoA synthetase domains
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
SCOP superfamily Quinoprotein alcohol dehydrogenase-like
SCOP superfamily PH domain-like
SCOP superfamily SH3-domain
SCOP superfamily Concanavalin A-like lectins/glucanases
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily Ypt/Rab-GAP domain of gyp1p
SCOP superfamily SAM/Pointed domain
SCOP superfamily Ribbon-helix-helix
SCOP superfamily Apolipoprotein
SCOP superfamily HMG-box
SCOP superfamily Homeodomain-like
SCOP superfamily Prefoldin
SCOP superfamily Gam-like
SCOP superfamily CHY zinc finger-like
SCOP superfamily Cation efflux protein transmembrane domain-like
SCOP superfamily gpW/gp25-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily Sec63 N-terminal domain-like
SCOP superfamily occludin/ELL-like
SCOP superfamily CSL zinc finger
SCOP superfamily YidB-like
SCOP superfamily WWE domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily Hormone receptor domain
SCOP superfamily YggX-like
SCOP superfamily HSP90 C-terminal domain
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily G protein-binding domain
SCOP superfamily Autotransporter
SCOP superfamily PetM subunit of the cytochrome b6f complex
SCOP superfamily PetL subunit of the cytochrome b6f complex
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily PAZ domain
SCOP superfamily YcfC-like
SCOP superfamily Phosphoprotein XD domain

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