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Thermoplasma acidophilum DSM 1728 superfamily assignments

Taxonomy
Taxonomy browser entry

Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma; Thermoplasma acidophilum; Thermoplasma acidophilum DSM 1728

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1484 total
1095 (74 %) with assignment
306 average length
69 % amino acid coverage
Domains: 1503 total
487 unique superfamilies
285 unique families
287 average length
3.1 average superfamily size
68 % formed by duplication
Domain combinations: 244 domain pairs
570 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

103 93 32 7 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
52 52 16 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
50 49 4 0 SCOP 103473 MFS general substrate transporter
48 48 16 1 SCOP 46785 "Winged helix" DNA-binding domain
30 29 4 7 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
23 22 12 3 SCOP 50249 Nucleic acid-binding proteins
21 21 5 0 SCOP 102114 Radical SAM enzymes
19 16 7 2 SCOP 51905 FAD/NAD(P)-binding domain
19 15 6 5 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
19 18 9 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
17 15 11 1 SCOP 53850 Periplasmic binding protein-like II
16 16 1 4 SCOP 53383 PLP-dependent transferases
15 15 4 0 SCOP 53448 Nucleotide-diphospho-sugar transferases
15 14 3 1 SCOP 161098 MetI-like
14 14 9 5 SCOP 54211 Ribosomal protein S5 domain 2-like
13 13 11 2 SCOP 52374 Nucleotidylyl transferase
13 13 3 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
12 12 9 2 SCOP 55681 Class II aaRS and biotin synthetases
12 6 1 1 SCOP 53901 Thiolase-like
10 10 4 2 SCOP 52317 Class I glutamine amidotransferase-like
10 6 4 3 SCOP 53067 Actin-like ATPase domain
10 10 1 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
10 10 7 2 SCOP 50447 Translation proteins
9 8 4 1 SCOP 52833 Thioredoxin-like
9 9 3 2 SCOP 56784 HAD-like
9 9 5 0 SCOP 54862 4Fe-4S ferredoxins
9 9 2 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
9 7 7 1 SCOP 54631 CBS-domain pair
9 5 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
8 8 2 1 SCOP 53474 alpha/beta-Hydrolases
8 8 1 3 SCOP 51569 Aldolase
8 6 4 3 SCOP 100950 NagB/RpiA/CoA transferase-like
8 5 4 0 SCOP 48452 TPR-like
8 8 4 2 SCOP 52096 ClpP/crotonase
8 8 3 5 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
8 8 5 2 SCOP 52467 DHS-like NAD/FAD-binding domain
7 6 6 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
7 7 1 1 SCOP 56801 Acetyl-CoA synthetase-like
7 7 3 0 SCOP 48208 Six-hairpin glycosidases
7 7 2 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
7 7 7 0 SCOP 46548 alpha-helical ferredoxin
7 7 2 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
7 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
7 7 2 1 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
6 6 3 1 SCOP 53271 PRTase-like
6 6 1 0 SCOP 57829 Zn-binding ribosomal proteins
6 6 2 1 SCOP 53790 Tetrapyrrole methylase
6 6 2 3 SCOP 51366 Ribulose-phoshate binding barrel
6 6 2 0 SCOP 54909 Dimeric alpha+beta barrel
6 6 1 2 SCOP 51604 Enolase C-terminal domain-like
6 5 2 0 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
6 6 3 1 SCOP 52922 TK C-terminal domain-like
6 3 3 0 SCOP 49464 Carboxypeptidase regulatory domain-like
6 6 1 1 SCOP 54826 Enolase N-terminal domain-like
6 6 2 0 SCOP 55060 GHMP Kinase, C-terminal domain
6 3 2 0 SCOP 47954 Cyclin-like
5 5 3 1 SCOP 51556 Metallo-dependent hydrolases
5 5 5 1 SCOP 50104 Translation proteins SH3-like domain
5 5 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
5 5 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 5 1 0 SCOP 75169 DsrEFH-like
5 5 3 1 SCOP 88723 PIN domain-like
5 5 3 0 SCOP 50022 ISP domain
5 5 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
5 4 2 1 SCOP 56042 PurM C-terminal domain-like
5 4 2 1 SCOP 55326 PurM N-terminal domain-like
4 4 4 0 SCOP 56112 Protein kinase-like (PK-like)
4 4 3 2 SCOP 53137 Translational machinery components
4 4 4 1 SCOP 55120 Pseudouridine synthase
4 4 3 0 SCOP 56300 Metallo-dependent phosphatases
4 4 1 0 SCOP 50129 GroES-like
4 4 1 2 SCOP 53633 Carbamate kinase-like
4 4 1 2 SCOP 48557 L-aspartase-like
4 4 1 1 SCOP 53720 ALDH-like
4 4 1 0 SCOP 54285 MoaD/ThiS
4 4 2 1 SCOP 51395 FMN-linked oxidoreductases
4 4 3 0 SCOP 50182 Sm-like ribonucleoproteins
4 4 3 2 SCOP 50475 FMN-binding split barrel
4 4 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
4 4 1 0 SCOP 52499 Isochorismatase-like hydrolases
4 4 3 1 SCOP 52954 Class II aaRS ABD-related
4 4 4 0 SCOP 47413 lambda repressor-like DNA-binding domains
4 4 3 0 SCOP 57783 Zinc beta-ribbon
4 4 4 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 4 4 1 SCOP 88697 PUA domain-like
4 4 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
4 4 2 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
4 4 3 0 SCOP 55021 ACT-like
4 4 3 1 SCOP 55186 ThrRS/AlaRS common domain
4 4 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
4 3 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 3 3 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
3 3 2 1 SCOP 53927 Cytidine deaminase-like
3 3 2 1 SCOP 53613 Ribokinase-like
3 3 1 1 SCOP 53697 SIS domain
3 3 2 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
3 3 1 2 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
3 3 2 1 SCOP 55920 Creatinase/aminopeptidase
3 3 2 0 SCOP 47240 Ferritin-like
3 3 1 2 SCOP 51658 Xylose isomerase-like
3 3 3 1 SCOP 53098 Ribonuclease H-like
3 3 3 1 SCOP 75217 alpha/beta knot
3 3 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
3 3 2 0 SCOP 51161 Trimeric LpxA-like enzymes
3 3 1 0 SCOP 48150 DNA-glycosylase
3 3 3 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 1 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
3 3 1 0 SCOP 53254 Phosphoglycerate mutase-like
3 3 1 2 SCOP 56796 Dehydroquinate synthase-like
3 3 3 0 SCOP 49764 HSP20-like chaperones
3 3 3 2 SCOP 55315 L30e-like
3 3 1 2 SCOP 51726 UROD/MetE-like
3 1 1 0 SCOP 54427 NTF2-like
3 3 3 3 SCOP 51445 (Trans)glycosidases
3 3 2 0 SCOP 74650 Galactose mutarotase-like
3 3 1 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 3 1 SCOP 50692 ADC-like
3 3 1 0 SCOP 50331 MOP-like
3 2 2 0 SCOP 56024 Phospholipase D/nuclease
3 3 2 1 SCOP 52490 Tubulin nucleotide-binding domain-like
3 3 3 1 SCOP 52743 Subtilisin-like
3 2 2 0 SCOP 54980 EF-G C-terminal domain-like
3 3 2 0 SCOP 81665 Calcium ATPase, transmembrane domain M
3 2 2 1 SCOP 52440 PreATP-grasp domain
3 3 1 1 SCOP 48310 Aldehyde ferredoxin oxidoreductase, C-terminal domains
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 1 1 0 SCOP 53738 Phosphoglucomutase, first 3 domains
3 3 2 0 SCOP 81653 Calcium ATPase, transduction domain A
3 3 1 1 SCOP 56228 Aldehyde ferredoxin oxidoreductase, N-terminal domain
3 3 3 1 SCOP 88802 Pre-PUA domain
3 3 2 0 SCOP 159071 TrmB C-terminal domain-like
2 2 2 0 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 0 SCOP 54197 HIT-like
2 2 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
2 2 1 0 SCOP 64182 DHH phosphoesterases
2 2 2 0 SCOP 110324 Ribosomal L27 protein-like
2 2 2 0 SCOP 55174 Alpha-L RNA-binding motif
2 2 2 0 SCOP 52980 Restriction endonuclease-like
2 2 1 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
2 2 1 1 SCOP 82784 OsmC-like
2 2 2 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
2 2 1 0 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 2 0 SCOP 54292 2Fe-2S ferredoxin-like
2 2 1 0 SCOP 55811 Nudix
2 2 1 1 SCOP 64307 SirA-like
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 1 0 SCOP 53187 Zn-dependent exopeptidases
2 2 2 1 SCOP 109604 HD-domain/PDEase-like
2 2 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 2 1 SCOP 56672 DNA/RNA polymerases
2 2 1 1 SCOP 48256 Citrate synthase
2 2 2 0 SCOP 48613 Heme oxygenase-like
2 2 1 0 SCOP 46579 Prefoldin
2 2 1 0 SCOP 53649 Alkaline phosphatase-like
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 2 0 SCOP 54897 Protease propeptides/inhibitors
2 2 1 0 SCOP 56317 Carbon-nitrogen hydrolase
2 2 1 1 SCOP 51182 RmlC-like cupins
2 2 2 1 SCOP 52972 ITPase-like
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 2 0 SCOP 88713 Glycoside hydrolase/deacetylase
2 2 2 1 SCOP 55257 RBP11-like subunits of RNA polymerase
2 2 1 1 SCOP 56529 FAH
2 2 1 0 SCOP 55961 Bet v1-like
2 2 1 1 SCOP 55909 Pentein
2 2 1 0 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 1 1 SCOP 81342 Transmembrane di-heme cytochromes
2 2 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 0 SCOP 55718 SCP-like
2 2 2 0 SCOP 46955 Putative DNA-binding domain
2 2 1 0 SCOP 53807 "Helical backbone" metal receptor
2 2 2 1 SCOP 51230 Single hybrid motif
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 0 SCOP 81301 Nucleotidyltransferase
2 2 2 0 SCOP 53300 vWA-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
2 2 1 1 SCOP 117396 TM1631-like
2 2 1 1 SCOP 53213 LigB-like
2 2 1 2 SCOP 89028 Cobalamin adenosyltransferase-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 2 2 0 SCOP 52242 Cobalamin (vitamin B12)-binding domain
2 2 1 1 SCOP 101874 YceI-like
2 2 1 0 SCOP 159659 Cgl1923-like
2 2 1 0 SCOP 53146 Nitrogenase accessory factor-like
2 2 2 0 SCOP 63867 MoeA C-terminal domain-like
2 2 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
2 2 1 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 1 1 SCOP 48592 GroEL equatorial domain-like
2 2 2 1 SCOP 50156 PDZ domain-like
2 1 1 0 SCOP 55979 DNA clamp
2 2 2 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 2 0 SCOP 51971 Nucleotide-binding domain
2 2 1 1 SCOP 55307 Tubulin C-terminal domain-like
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 1 SCOP 52029 GroEL apical domain-like
2 2 2 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
2 2 1 0 SCOP 63380 Riboflavin synthase domain-like
2 2 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
2 2 2 1 SCOP 63882 MoeA N-terminal region -like
2 1 1 1 SCOP 55945 TATA-box binding protein-like
2 2 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 2 2 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 1 1 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
2 2 1 0 SCOP 81271 TGS-like
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 2 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 1 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 81606 PP2C-like
1 1 1 0 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 89447 AbrB/MazE/MraZ-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 0 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 0 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 51730 FAD-linked oxidoreductase
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 0 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 142695 RibA-like
1 1 1 0 SCOP 55205 EPT/RTPC-like
1 1 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 1 0 SCOP 46689 Homeodomain-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 51419 PLP-binding barrel
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 89957 MTH1187/YkoF-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 1 SCOP 52042 Ribosomal protein L32e
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 1 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 54534 FKBP-like
1 1 1 1 SCOP 56322 ADC synthase
1 1 1 0 SCOP 48403 Ankyrin repeat
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 57997 Tropomyosin
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 49899 Concanavalin A-like lectins/glucanases
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 51126 Pectin lyase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 55781 GAF domain-like
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 55159 eIF1-like
1 1 1 0 SCOP 55008 HMA, heavy metal-associated domain
1 1 1 1 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 1 SCOP 103378 2-methylcitrate dehydratase PrpD
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 53800 Chelatase
1 1 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
1 1 1 0 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
1 1 1 0 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 69118 AhpD-like
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 1 SCOP 143422 Transposase IS200-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 47598 Ribbon-helix-helix
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 52016 LeuD/IlvD-like
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 0 SCOP 143100 TTHA1013/TTHA0281-like
1 1 1 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
1 1 1 0 SCOP 75712 Rad50 coiled-coil Zn hook
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 49503 Cupredoxins
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 117782 YbjQ-like
1 1 1 1 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
1 1 1 1 SCOP 103025 Folate-binding domain
1 1 1 1 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 1 SCOP 69322 Tricorn protease domain 2
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 1 SCOP 111326 Urocanase
1 1 1 1 SCOP 51219 TRAP-like
1 1 1 0 SCOP 53041 Resolvase-like
1 1 1 0 SCOP 103247 TT1751-like
1 1 1 0 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
1 1 1 0 SCOP 56271 Pyruvoyl-dependent histidine and arginine decarboxylases
1 1 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 75005 Arabinanase/levansucrase/invertase
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 159672 CbiG N-terminal domain-like
1 1 1 1 SCOP 102198 Putative cyclase
1 1 1 0 SCOP 46565 Chaperone J-domain
1 1 1 0 SCOP 82704 AlbA-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 89124 Nop domain
1 1 1 1 SCOP 142535 AF0625-like
1 1 1 1 SCOP 143560 MK0786-like
1 1 1 1 SCOP 111249 Sulfolobus fructose-1,6-bisphosphatase-like
1 1 1 1 SCOP 158436 Ta0600-like
1 1 1 1 SCOP 160975 AF1531-like
1 1 1 0 SCOP 54984 eEF-1beta-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 1 SCOP 102891 Hypothetical protein Ta1206
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
1 1 1 0 SCOP 158372 AF1782-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 160363 MTH889-like
1 1 1 0 SCOP 110455 Toprim domain
1 1 1 1 SCOP 103165 Ta1353-like
1 1 1 1 SCOP 52777 CoA-dependent acyltransferases
1 1 1 0 SCOP 48008 GntR ligand-binding domain-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 51246 Rudiment single hybrid motif
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 142823 ComB-like
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 56176 FAD-binding/transporter-associated domain-like
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 1 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 102645 CoaB-like
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 1 SCOP 143555 FwdE-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 48019 post-AAA+ oligomerization domain-like
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 1 SCOP 111342 CbiD-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 51011 Glycosyl hydrolase domain
1 1 1 0 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 0 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 81631 PAP/OAS1 substrate-binding domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
1 1 1 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
1 1 1 0 SCOP 54768 dsRNA-binding domain-like
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 158702 Sec63 N-terminal domain-like
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 101447 Formin homology 2 domain (FH2 domain)
1 1 1 0 SCOP 116846 MIT domain
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 1 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 54585 Cdc48 domain 2-like
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 103623 Hypothetical protein Ta0289 C-terminal domain
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 141300 GatD N-terminal domain-like
1 1 1 0 SCOP 140914 PriB N-terminal domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 55267 tRNA-intron endonuclease N-terminal domain-like
1 1 1 1 SCOP 116858 Hypothetical membrane protein Ta0354, soluble domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily PHP domain-like
SCOP superfamily GatB/YqeY motif
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily N-utilization substance G protein NusG, N-terminal domain
SCOP superfamily Heme chaperone CcmE
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIa
SCOP superfamily F1F0 ATP synthase subunit A
SCOP superfamily Cullin homology domain
SCOP superfamily Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily Hemolysin expression modulating protein HHA
SCOP superfamily Thiamin pyrophosphokinase, catalytic domain
SCOP superfamily Pyridoxine 5'-phosphate synthase
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily SNARE fusion complex
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily Cysteine-rich domain
SCOP superfamily RING/U-box
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily PheT/TilS domain
SCOP superfamily Nitrite and sulphite reductase 4Fe-4S domain-like
SCOP superfamily Homing endonucleases
SCOP superfamily Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP superfamily Ubiquitin-like
SCOP superfamily LexA/Signal peptidase
SCOP superfamily cAMP-binding domain-like
SCOP superfamily PH domain-like
SCOP superfamily Ricin B-like lectins
SCOP superfamily Galactose-binding domain-like
SCOP superfamily Starch-binding domain-like
SCOP superfamily Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
SCOP superfamily Fibronectin type III
SCOP superfamily Multiheme cytochromes
SCOP superfamily RuvA domain 2-like
SCOP superfamily EF-hand
SCOP superfamily Spectrin repeat
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily PsbZ-like
SCOP superfamily BT0923-like
SCOP superfamily BLRF2-like
SCOP superfamily Rnp2-like
SCOP superfamily FlaG-like
SCOP superfamily GINS helical bundle-like
SCOP superfamily HIT/MYND zinc finger-like
SCOP superfamily Rhomboid-like
SCOP superfamily ERH-like
SCOP superfamily YefM-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily SP0561-like
SCOP superfamily Vacuolar ATP synthase subunit C
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Recombination protein RecR
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily DEK C-terminal domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily YgfB-like

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