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Domain assignment for gi|257059098|ref|YP_003136986.1| from Cyanothece sp. PCC 8802

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|257059098|ref|YP_003136986.1|
Domain Number 1 Region: 463-557
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.0000000000798
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.0081
Further Details:      
 
Domain Number 2 Region: 399-461
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 0.000000000915
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.0042
Further Details:      
 
Domain Number 3 Region: 343-397
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0000000012
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|257059098|ref|YP_003136986.1|
Sequence length 569
Comment mechanosensitive ion channel MscS [Cyanothece sp. PCC 8802]
Sequence
MILRKQYSLLIHSLILIVSACVIALIVASIPVNAQLYSNQQPIGTSPSTTIGEQTLIRME
PVKLDGRTLFMIAGMGSNDGKETASLDNRVDFIEDALYKFLKEDFNVESLRVEVHDKGDH
TKIVASDNGNFKDVPLFILTPLDARVAGFTLAESSNYIATATEKALKKGWQERQTNYLEK
QVKFSIILVLIGLFVSSIIWLWQHKIKQREAILREQKMECDRKITENTMSVEMDEDEEHS
SGFCQKLATEQLHNRQMLDRKGLQRYLLQVTQGAIWIGIIAWILELFPYTRAWRGTVLQL
PLLFGVLLLAIAAAKWSGILVDRTLEKWLRYRQNLSPEAIERWLLRANSFAPIIKSIMAT
LIIIIAVLFVLSQLGIPLTPILAGAGILSLAISLGSQRLIADLISGTLILIEDQYAIGDF
VTLNDNSFGRVERLNLRSTALRNRQGNLITLSNSDIKQVNNLSKDWARSKLYIPVHFSAN
VDIAIKVLEQVIEDMKADDFWNSLIQEAEVRGVEDIDGYGFTVGVRFQTKPGIFRKVIRE
YRRRLKPAFDQANIRFAERPVYQSGQVNN
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Identical sequences 395962.Cyan8802_1226 gi|257059098|ref|YP_003136986.1| WP_015783532.1.62203

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